>LOC_Os03g51350:12003.t04465:unspliced-genomic expressed protein|
          Length = 1864
 Score =  106 bits (226), Expect(6) = 3e-52
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = +1 / +2

                                                     
Query: 349 DVMTHSFGEGYSTRSDEEGFGGVYGQNDPVLNPGTEMHPNHP 474
           DVMTHSFGEGYSTRSDEEGFGGVYGQNDPV NPGTE+HP+HP
Sbjct: 455 DVMTHSFGEGYSTRSDEEGFGGVYGQNDPVFNPGTEVHPSHP 580



 Score = 59.3 bits (123), Expect(6) = 3e-52
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = +1 / +1

                                      
Query: 475  EYDKSQGSEVKEKEKARHLKDDKHAT 552
            EYD SQGSEVKEKEKARH KDDKHAT
Sbjct: 1396 EYDTSQGSEVKEKEKARHHKDDKHAT 1473



 Score = 48.7 bits (100), Expect(6) = 3e-52
 Identities = 20/40 (50%), Positives = 24/40 (60%)
 Frame = +1 / +2

                                                   
Query: 184 RRSVSATSNAAAPVPGDQDFGMDPAKQQHHLPKAQAGEQQ 303
           RR+VS T NAAAP PG+Q   M+  KQQH  P     + Q
Sbjct: 197 RRTVSVTPNAAAPTPGEQGVAMEQGKQQHQPPPPSQPQPQ 316



 Score = 48.3 bits (99), Expect(6) = 3e-52
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = +1 / +2

                                 
Query: 34  PLMYSLRLATSGSTALGFALGR 99
           PLMYSLRLA+SGST LGFALGR
Sbjct: 44  PLMYSLRLASSGSTGLGFALGR 109



 Score = 22.6 bits (43), Expect(6) = 3e-52
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1 / +2

                         
Query: 295 EQQGNASEDTHKTT 336
           E++G+  +D HKTT
Sbjct: 320 EKRGSRDDDMHKTT 361



 Score = 22.6 bits (43), Expect(6) = 3e-52
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3 / +1

                      
Query: 333 YHCSRGRDDPL 365
           + C +GRDDPL
Sbjct: 439 FACVQGRDDPL 471



 Score = 91.8 bits (194), Expect(4) = 3e-40
 Identities = 35/41 (85%), Positives = 36/41 (87%)
 Frame = -3 / -2

                                                    
Query: 473 GWLGCISVPGLSTGSFWP*TPPNPSSSDLVEYPSPNEWVIT 351
           GWLGC SVPGL+TGSF P TPPNPSSSD VEYPSP EWVIT
Sbjct: 579 GWLGCTSVPGLNTGSFCPYTPPNPSSSDRVEYPSPKEWVIT 457



 Score = 48.7 bits (100), Expect(4) = 3e-40
 Identities = 19/33 (57%), Positives = 22/33 (66%)
 Frame = -3 / -2

                                            
Query: 278 GRWCCCLAGSMPKSWSPGTGAAAFDVAETLLLL 180
           G WCCCL  S+    SPG GAAA  V ET+LL+
Sbjct: 291 GGWCCCLPCSIATPCSPGVGAAALGVTETVLLV 193



 Score = 48.3 bits (99), Expect(4) = 3e-40
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = -3 / -3

                              
Query: 527  WRAFSFSFTSDPCDLSYS 474
            WRAFSFSFTSDPCD+SYS
Sbjct: 1448 WRAFSFSFTSDPCDVSYS 1395



 Score = 41.4 bits (84), Expect(4) = 3e-40
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = -3 / -2

                                 
Query: 98  RPSAKPSAVLPLVASLREYMRG 33
           RPSAKPS VLPL+A   EYMRG
Sbjct: 108 RPSAKPSPVLPLLAKRSEYMRG 43



 Score = 39.6 bits (80), Expect(2) = 0.002
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = -2 / -1

                                
Query: 471 MVGVHFGPRVEHRVVLAVDAS 409
           + GVH GPRVEHRVVL+V A+
Sbjct: 577 VAGVHLGPRVEHRVVLSVHAT 515



 Score = 25.8 bits (50), Expect(2) = 0.002
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = -1 / -1

                                       
Query: 556  LRSRACRP*DGXXXXXXXXXXXXTCRT 476
            LRSRACRP  G            TCRT
Sbjct: 1477 LRSRACRPYGGAPSPSPSPPTPATCRT 1397



 Score = 42.8 bits (87), Expect = 0.003
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = +2 / +3

                                
Query: 413 ASTARTTRCSTLGPKCTPTIL 475
           A T RTTRCSTLGP+CTP  L
Sbjct: 519 ACTDRTTRCSTLGPRCTPATL 581

>LOC_Os10g08580:12010.t00678:unspliced-genomic deoxyribodipyrimidine photo-lyase, putative, expressed|
          Length = 3863

 Score = 30.9 bits (61), Expect(2) = 0.41
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +1 / -3

                                                          
Query: 154 APATAAQVGRRRSVSATSNAAAPVPGDQDFGMDPAKQQHHLPKAQAG 294
           AP + A   R R  ++T   AAP PG     +  ++++ H+   + G
Sbjct: 561 APPSPAAAARSRRPASTHQGAAPAPGSPRAHLSASQRKSHVTFRKTG 421



 Score = 27.2 bits (53), Expect(2) = 0.41
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1 / -3

                                            
Query: 7   PPSTDELYYPLMYSLRLATSGSTALGFALGRKT 105
           PP+T   Y+P + +L ++ S ST  G +L   T
Sbjct: 966 PPNTP*NYHPHLQTLAMSASQSTPSGCSLSHGT 868

>LOC_Os03g14669:12003.t01255:unspliced-genomic nuclear transcription factor Y subunit C-1, putative, expressed|
          Length = 2540

 Score = 34.5 bits (69), Expect = 1.0
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -3 / -1

                                      
Query: 287  CALGRWCCCLAGSMPKSWSPGTGAAA 210
            C   RW C  AG  P   +PGTGA A
Sbjct: 1580 CCWSRWWCGTAGGPPAPGTPGTGAPA 1503



 Score = 33.1 bits (66), Expect = 2.7
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1 / +1

                                               
Query: 199  ATSNAAAPVPGDQDFGMDPAKQQHHLPKAQAGEQQ 303
            A + A APVPG    G  PA   HHL + Q  + Q
Sbjct: 1492 AAAGAGAPVPGVPGAGGPPAVPHHHLLQQQQAQLQ 1596

>LOC_Os04g58160:12004.t05280:unspliced-genomic fiber protein Fb34, putative, expressed|
          Length = 5204

 Score = 34.1 bits (68), Expect = 1.4
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -3 / +2

                                     
Query: 284  ALGRWCCCLAGSMPKSWSPGTGAAA 210
            A GR CCC  G     WSP   AAA
Sbjct: 3839 ASGRCCCCSPGRPSSWWSPAASAAA 3913

>LOC_Os03g63074:12003.t05528:unspliced-genomic Ser/Thr protein phosphatase family protein, expressed|
          Length = 7153

 Score = 25.4 bits (49), Expect(2) = 2.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3 / +3

                                          
Query: 266  CCLAGSMPKSWSPGTGAAAFDVAETLLLLP 177
            C     +PK+   G  ++   V+  LLLLP
Sbjct: 3147 CSTVAGVPKNKGNGAASSTHKVSSILLLLP 3236



 Score = 24.9 bits (48), Expect(2) = 2.5
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3 / +2

                             
Query: 95   PSAKPSAVLPLVASLRE 45
            PS + S++LP VASL E
Sbjct: 3290 PSRRSSSILPTVASLPE 3340

>LOC_Os01g60650:12001.t05446:unspliced-genomic non-green plastid inner envelope membrane protein, putative,|
            expressed
          Length = 4539

 Score = 32.7 bits (65), Expect = 3.7
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3 / -3

                                          
Query: 464  GCISVPGLSTGSFWP*TPPNPSSSDLVEYP 375
            GC+S+ G+ T S W     NPSS D + +P
Sbjct: 3487 GCLSLMGMETESKWASQSSNPSSCDHLIHP 3398

>LOC_Os01g60640:12001.t05445:unspliced-genomic OsWRKY21 - Superfamily of rice TFs having WRKY and zinc finger|
            domains, expressed
          Length = 2207

 Score = 32.7 bits (65), Expect = 3.7
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3 / +2

                                          
Query: 464  GCISVPGLSTGSFWP*TPPNPSSSDLVEYP 375
            GC+S+ G+ T S W     NPSS D + +P
Sbjct: 1988 GCLSLMGMETESKWASQSSNPSSCDHLIHP 2077

>LOC_Os11g11610:12011.t01048:unspliced-genomic conserved hypothetical protein|
          Length = 578

 Score = 32.7 bits (65), Expect = 3.7
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +1 / -1

                                       
Query: 154 APATAAQVGRRRSVSATSNAAAPVPGDQ 237
           A   AAQVG+RR  +A   AA+P PG++
Sbjct: 173 ASGAAAQVGQRRPGAAVCAAASPSPGER 90

>LOC_Os08g43350:12008.t04060:unspliced-genomic NC domain containing protein, expressed|
          Length = 2895

 Score = 32.2 bits (64), Expect = 5.1
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +1 / +2

                                     
Query: 154  APATAAQVGRRRSVSATSNAAAPVP 228
            AP+TA+    RR  S+ S+AAAP P
Sbjct: 2024 APSTASSTASRRRCSSPSSAAAPAP 2098

>LOC_Os04g31340:12004.t02817:unspliced-genomic AKIN gamma, putative, expressed|
          Length = 5156

 Score = 32.2 bits (64), Expect = 5.1
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +1 / -1

                              
Query: 778  HACVRGEIRSSECFTKAP 831
            H CV  E R SECF KAP
Sbjct: 3422 HLCVLVEFRGSECFEKAP 3369

>LOC_Os09g12630:12009.t01052:unspliced-genomic expressed protein|
          Length = 855

 Score = 31.8 bits (63), Expect = 6.9
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -3 / +3

                                                               
Query: 527 WRAFSFSFTSDPCDLSYSGWLGCISVPGLSTGSFWP*TPPNPSSSDLVEYPS 372
           WR  +   +S  C  S +G  GC S PG  T +    TP   S++     PS
Sbjct: 522 WRPAASGASSATCR*SAAGDTGCCSAPGARTPTTQTRTPAGSSATPWSSSPS 677

>LOC_Os05g32710:12005.t02867:unspliced-genomic isoamylase-type starch debranching enzyme ISO2, putative, expressed|
          Length = 2631

 Score = 31.8 bits (63), Expect = 6.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3 / -2

                                           
Query: 452 VPGLSTGSFWP*TPPNPSSSDLVEYPSPNEWV 357
           VPG ST + +P  PP+PSS +     +P+  V
Sbjct: 224 VPGTSTDTAYPPPPPSPSSPETATSTTPSSSV 129

>LOC_Os10g30300:12010.t02364:unspliced-genomic expressed protein|
          Length = 2959

 Score = 31.8 bits (63), Expect = 6.9
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +1 / +2

                                                                 
Query: 181 RRRSVSATSNAAAPVPGDQDFGMDPAKQQHHLPKAQAGEQQGNASEDTHKTTTA 342
           RR   +A S AAA   G+      P +   H P++ +G + G A++ +  ++ A
Sbjct: 35  RRCCATAESAAAAEAAGEASRRRSPTRSSAHSPRSLSGRRGGQAAKGSCASSLA 196

>LOC_Os08g40410:12008.t03771:unspliced-genomic ACR7, putative|
          Length = 1938

 Score = 31.8 bits (63), Expect = 6.9
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1 / -2

                                             
Query: 4   APPSTDELYYPLMYSLRLATSGSTALGFALGRKT 105
           +PP TDEL  PL+ +   A    T +GFA  R T
Sbjct: 218 SPPLTDELRPPLLAAPATAKPRPTTVGFAASRGT 117

>LOC_Os08g11970:12008.t01077:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 2305

 Score = 31.8 bits (63), Expect = 6.9
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1 / -3

                                             
Query: 4   APPSTDELYYPLMYSLRLATSGSTALGFALGRKT 105
           +PP TDEL  PL+ +   A    T +GFA  R T
Sbjct: 218 SPPLTDELRPPLLAAPATAKPRPTTVGFAASRGT 117

>LOC_Os05g47480:12005.t04184:unspliced-genomic transcription initiation factor IIB, putative, expressed|
          Length = 1493

 Score = 31.8 bits (63), Expect = 6.9
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +1 / +2

                                                            
Query: 157 PATAAQVGRRRSVSATSNAAAPVPGDQDFGMDPAKQQHHLPKAQAGEQQ 303
           PA   + GRRR       A   V G +  G  P  ++HH    Q G Q+
Sbjct: 398 PAADEEEGRRRRPVPGERARRRVQGHRRHGRPPRPRRHHPRPRQGGVQE 544

>LOC_Os02g38140:12002.t03452:unspliced-genomic beta 1,4 N-acetylglucosaminyltransferase, putative, expressed|
          Length = 2913

 Score = 31.8 bits (63), Expect = 6.9
 Identities = 17/57 (29%), Positives = 24/57 (42%)
 Frame = +1 / -1

                                                                    
Query: 166 AAQVGRRRSVSATSNAAAPVPGDQDFGMDPAKQQHHLPKAQAGEQQGNASEDTHKTT 336
           AA+VG R S    + A    P D+     P   QH   ++Q+      AS+    TT
Sbjct: 273 AAKVGTRCSPPMATRACVRPPADRPTQPSPEHHQHRRRRSQSSSHVPRASDPGDSTT 103

>LOC_Os11g33340:12011.t02928:unspliced-genomic xaa-Pro aminopeptidase 1, putative, expressed|
          Length = 11378

 Score = 31.3 bits (62), Expect = 9.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3 / +2

                                
Query: 482  SYSGWLGCISVPGLSTGSFW 423
            +YS W GC ++PGL+  S W
Sbjct: 4247 TYSRWCGCCAIPGLA*QSGW 4306

>LOC_Os08g24710:12008.t02241:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3275

 Score = 31.3 bits (62), Expect = 9.5
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -3 / +1

                                                 
Query: 263  CLAGSMPKSWSPGTGAAAFDVAETLLLLPTWAAVAGA 153
            CL GS P+S    T       ++TL LL  W  VAG+
Sbjct: 1822 CLYGSTPRSTKASTTNVDKAPSQTLRLLDHWRTVAGS 1932

>LOC_Os04g55670:12004.t05039:unspliced-genomic glycosyltransferase, putative, expressed|
          Length = 3109

 Score = 31.3 bits (62), Expect = 9.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3 / +2

                                 
Query: 275 RWCCCLAGSMPKSWSPGTGAAA 210
           R CCC   S P  W  G+G+ A
Sbjct: 308 RGCCCTRSSAPPPWRSGSGSRA 373

>LOC_Os04g41210:12004.t03682:unspliced-genomic hypothetical protein|
          Length = 397

 Score = 31.3 bits (62), Expect = 9.5
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1 / -3

                                                          
Query: 154 APATAAQVGRRRSVSATSNAAAPVPGDQDFGMDPAKQQHHLPKAQAG 294
           AP  A+ +  +RSV+ T +AAAP      F    A      P+ + G
Sbjct: 149 APTAASSLRPQRSVTPTHSAAAPAAATATFTAASAADMRRTPRIRNG 9

>LOC_Os01g13460:12001.t01208:unspliced-genomic helix-loop-helix DNA-binding domain containing protein, expressed|
          Length = 3335

 Score = 31.3 bits (62), Expect = 9.5
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1 / -3

                                                  
Query: 361 HSFGEGYSTRSDEEGFGGVYGQNDPVLNPGTEMHPNHPE 477
           H+ G   +TR+D         +    LNP +  +PNHP+
Sbjct: 591 HAIGYSQNTRADRGQSDSTLSKPSSRLNPPSSSNPNHPK 475


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 259,100,949
Number of extensions: 3401201
Number of successful extensions: 15094
Number of sequences better than 10.0: 22
Length of query: 289
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 240
Effective length of database: 52,856,264
Effective search space: 12685503360
Effective search space used: 12685503360
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)