| Clone Name | FLbaf39l03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001069076.1| Oryza sativa (japonica cultivar-group) Os08g0566400 (Os08g0566400) mRNA, complete cds Length = 1626 Score = 722 bits (364), Expect = 0.0 Identities = 865/1032 (83%) Strand = Plus / Plus Query: 175 tcgtgctcggctgcggcgccgtatctgtggactacctcgccaccgtcgcctctttcccca 234 ||||||| |||||||||||||| || | |||||||||||||||||||||||| ||||||| Sbjct: 186 tcgtgcttggctgcggcgccgtctccgcggactacctcgccaccgtcgcctccttcccca 245 Query: 235 accccgacgacaagatccgcagcctcgcgctcaaggtcgagggaggcggcaacgccggca 294 ||||||||||||||||||| ||||| ||||||||||| |||||||||||||| | |||| Sbjct: 246 accccgacgacaagatccgaagcctaacgctcaaggtccagggaggcggcaacactggca 305 Query: 295 acgccctcaccggagccgctcgcctgggcctcagcccaaggattatatccaaggtgtcca 354 | ||| | |||| || ||||| ||||||| |||||||||| ||||||||||| |||| Sbjct: 306 atgccttgaccgccgctgctcgtttgggccttcgcccaaggatcatatccaaggtatcca 365 Query: 355 atgatgcactaggaaaaaacattctcaaggagctgcaagacgacggagtagacacttcct 414 |||| ||| ||||| ||| |||||||||||||||||||| || || || ||||| || Sbjct: 366 atgacccacaaggaagaaatattctcaaggagctgcaagatgatggggtcgacacctctc 425 Query: 415 atatggcgatagcagatggaggaaattcacccttcacctatataatcgtcgataaccaga 474 |||| | | ||||| | || |||||||| |||||||||||||| || || ||||||| Sbjct: 426 atatcctggttgcagaggaggggaattcacctttcacctatataattgttgacaaccaga 485 Query: 475 cgaaaactcgtacttgcatacacactcctggttatcccccaatgaagccggaggagctca 534 |||||||||||||||| || ||||||||||||||||| || ||| || || ||||||| Sbjct: 486 cgaaaactcgtacttgtattcacactcctggttatcctcctatggtccctgaagagctca 545 Query: 535 caaaggaaaacttgtttgctgctttacatggcgtagacatggtgtattttgatgttagac 594 || | |||||||||||||| |||||| | || | ||||| || ||||||||||| ||| Sbjct: 546 cacaagaaaacttgtttgccgctttagacggtgctgacattgtatattttgatgtcagat 605 Query: 595 tgcatgagactgctttgcttgttgcagaagaggcaagccaaagaaaaatccctattttgg 654 ||||||| |||||||| || ||||| ||||||||||||||||||||| | ||||||||| Sbjct: 606 tgcatgaaactgctttactagttgctgaagaggcaagccaaagaaaacttcctattttga 665 Query: 655 tcgacgccgagaaaaagagggagggattggatgaccttctgaattttgcatcatatgttg 714 | || ||||| |||||||| |||||||| || ||||| ||||| ||||| ||||||| Sbjct: 666 ttgatgccgaacggaagagggatggattggacgagcttctcaatttcgcatcttatgttg 725 Query: 715 tatgctctgcaaagtttcctcaggcctggacaggagcctcatcgacaccagttgcattgg 774 ||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||| |||| Sbjct: 726 tatgctctgcaaaatttcctcaggcttggacaggagcctcatcaacaccggttgctttgg 785 Query: 775 tacacatgcttctgaggttacctaatctcaagttcgttattgtaacccggggcgagaaag 834 | ||||||| | || || |||||| ||||||| |||||||||||| || || || | Sbjct: 786 tgtccatgcttttaagattgcctaatatcaagtttattattgtaacccttggagaaaagg 845 Query: 835 gttgcttaatgcttgaaagaagtatgacagatgcttctgagaccgaggaaagtgatgtag 894 | ||||| |||||||||||||| | ||||||||||||||| | ||||||| ||||||| Sbjct: 846 gatgcttgatgcttgaaagaagcacaacagatgcttctgaggcagaggaaatagatgtag 905 Query: 895 aggatctgctagaatctttagagcagaaagtcgatttgagttctagcatggcaaaatgca 954 || ||| || ||||| ||||| |||||| | ||||||||| |||||| ||||||||| Sbjct: 906 agagtcttctggaatcactagagaagaaagaagttttgagttcaagcatgccaaaatgca 965 Query: 955 ttgcttccaagtcaaatttgagaataagtgcagatggcgttggttcgatgagtggcaggt 1014 | || |||||||||||||||||||||||||||||||| | || || || |||||||| | Sbjct: 966 tcgcctccaagtcaaatttgagaataagtgcagatggaataggatccatcagtggcagat 1025 Query: 1015 tacttttgggtacagctgaagctataccctctgaagagctcatagatacaactggtgcag 1074 ||||||| || || || ||| |||||||||||||||||||||||||||||||||||| | Sbjct: 1026 tacttttaggcactgccgaaattataccctctgaagagctcatagatacaactggtgcgg 1085 Query: 1075 gtgatgcattcattggagccgttctatatggtttatgcaccggcatgccagttgagaaga 1134 |||||||||| || ||||| ||||| || ||||||||| | |||||||| |||||||| Sbjct: 1086 gtgatgcatttatcggagcagttctctacggtttatgctctggcatgccgcctgagaaga 1145 Query: 1135 tgttgcctttcgcagcacaagtggccgcttgcggctgcagagctttgggggccaggactg 1194 || ||||||| ||||| |||||||| |||||||| ||||| | ||| ||||| |||||| Sbjct: 1146 tgctgccttttgcagctcaagtggctgcttgcgggtgcaggggtttaggggctcggactg 1205 Query: 1195 gtcttcctcatc 1206 |||||| |||| Sbjct: 1206 ctcttccccatc 1217
>dbj|AK067804.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119N07, full insert sequence Length = 1627 Score = 722 bits (364), Expect = 0.0 Identities = 865/1032 (83%) Strand = Plus / Plus Query: 175 tcgtgctcggctgcggcgccgtatctgtggactacctcgccaccgtcgcctctttcccca 234 ||||||| |||||||||||||| || | |||||||||||||||||||||||| ||||||| Sbjct: 187 tcgtgcttggctgcggcgccgtctccgcggactacctcgccaccgtcgcctccttcccca 246 Query: 235 accccgacgacaagatccgcagcctcgcgctcaaggtcgagggaggcggcaacgccggca 294 ||||||||||||||||||| ||||| ||||||||||| |||||||||||||| | |||| Sbjct: 247 accccgacgacaagatccgaagcctaacgctcaaggtccagggaggcggcaacactggca 306 Query: 295 acgccctcaccggagccgctcgcctgggcctcagcccaaggattatatccaaggtgtcca 354 | ||| | |||| || ||||| ||||||| |||||||||| ||||||||||| |||| Sbjct: 307 atgccttgaccgccgctgctcgtttgggccttcgcccaaggatcatatccaaggtatcca 366 Query: 355 atgatgcactaggaaaaaacattctcaaggagctgcaagacgacggagtagacacttcct 414 |||| ||| ||||| ||| |||||||||||||||||||| || || || ||||| || Sbjct: 367 atgacccacaaggaagaaatattctcaaggagctgcaagatgatggggtcgacacctctc 426 Query: 415 atatggcgatagcagatggaggaaattcacccttcacctatataatcgtcgataaccaga 474 |||| | | ||||| | || |||||||| |||||||||||||| || || ||||||| Sbjct: 427 atatcctggttgcagaggaggggaattcacctttcacctatataattgttgacaaccaga 486 Query: 475 cgaaaactcgtacttgcatacacactcctggttatcccccaatgaagccggaggagctca 534 |||||||||||||||| || ||||||||||||||||| || ||| || || ||||||| Sbjct: 487 cgaaaactcgtacttgtattcacactcctggttatcctcctatggtccctgaagagctca 546 Query: 535 caaaggaaaacttgtttgctgctttacatggcgtagacatggtgtattttgatgttagac 594 || | |||||||||||||| |||||| | || | ||||| || ||||||||||| ||| Sbjct: 547 cacaagaaaacttgtttgccgctttagacggtgctgacattgtatattttgatgtcagat 606 Query: 595 tgcatgagactgctttgcttgttgcagaagaggcaagccaaagaaaaatccctattttgg 654 ||||||| |||||||| || ||||| ||||||||||||||||||||| | ||||||||| Sbjct: 607 tgcatgaaactgctttactagttgctgaagaggcaagccaaagaaaacttcctattttga 666 Query: 655 tcgacgccgagaaaaagagggagggattggatgaccttctgaattttgcatcatatgttg 714 | || ||||| |||||||| |||||||| || ||||| ||||| ||||| ||||||| Sbjct: 667 ttgatgccgaacggaagagggatggattggacgagcttctcaatttcgcatcttatgttg 726 Query: 715 tatgctctgcaaagtttcctcaggcctggacaggagcctcatcgacaccagttgcattgg 774 ||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||| |||| Sbjct: 727 tatgctctgcaaaatttcctcaggcttggacaggagcctcatcaacaccggttgctttgg 786 Query: 775 tacacatgcttctgaggttacctaatctcaagttcgttattgtaacccggggcgagaaag 834 | ||||||| | || || |||||| ||||||| |||||||||||| || || || | Sbjct: 787 tgtccatgcttttaagattgcctaatatcaagtttattattgtaacccttggagaaaagg 846 Query: 835 gttgcttaatgcttgaaagaagtatgacagatgcttctgagaccgaggaaagtgatgtag 894 | ||||| |||||||||||||| | ||||||||||||||| | ||||||| ||||||| Sbjct: 847 gatgcttgatgcttgaaagaagcacaacagatgcttctgaggcagaggaaatagatgtag 906 Query: 895 aggatctgctagaatctttagagcagaaagtcgatttgagttctagcatggcaaaatgca 954 || ||| || ||||| ||||| |||||| | ||||||||| |||||| ||||||||| Sbjct: 907 agagtcttctggaatcactagagaagaaagaagttttgagttcaagcatgccaaaatgca 966 Query: 955 ttgcttccaagtcaaatttgagaataagtgcagatggcgttggttcgatgagtggcaggt 1014 | || |||||||||||||||||||||||||||||||| | || || || |||||||| | Sbjct: 967 tcgcctccaagtcaaatttgagaataagtgcagatggaataggatccatcagtggcagat 1026 Query: 1015 tacttttgggtacagctgaagctataccctctgaagagctcatagatacaactggtgcag 1074 ||||||| || || || ||| |||||||||||||||||||||||||||||||||||| | Sbjct: 1027 tacttttaggcactgccgaaattataccctctgaagagctcatagatacaactggtgcgg 1086 Query: 1075 gtgatgcattcattggagccgttctatatggtttatgcaccggcatgccagttgagaaga 1134 |||||||||| || ||||| ||||| || ||||||||| | |||||||| |||||||| Sbjct: 1087 gtgatgcatttatcggagcagttctctacggtttatgctctggcatgccgcctgagaaga 1146 Query: 1135 tgttgcctttcgcagcacaagtggccgcttgcggctgcagagctttgggggccaggactg 1194 || ||||||| ||||| |||||||| |||||||| ||||| | ||| ||||| |||||| Sbjct: 1147 tgctgccttttgcagctcaagtggctgcttgcgggtgcaggggtttaggggctcggactg 1206 Query: 1195 gtcttcctcatc 1206 |||||| |||| Sbjct: 1207 ctcttccccatc 1218
>dbj|AK104887.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B05, full insert sequence Length = 901 Score = 454 bits (229), Expect = e-124 Identities = 535/637 (83%) Strand = Plus / Plus Query: 570 gacatggtgtattttgatgttagactgcatgagactgctttgcttgttgcagaagaggca 629 ||||| || ||||||||||| ||| ||||||| |||||||| || ||||| ||||||||| Sbjct: 7 gacattgtatattttgatgtcagattgcatgaaactgctttactagttgctgaagaggca 66 Query: 630 agccaaagaaaaatccctattttggtcgacgccgagaaaaagagggagggattggatgac 689 |||||||||||| | ||||||||| | || ||||| |||||||| |||||||| || Sbjct: 67 agccaaagaaaacttcctattttgattgatgccgaacggaagagggatggattggacgag 126 Query: 690 cttctgaattttgcatcatatgttgtatgctctgcaaagtttcctcaggcctggacagga 749 ||||| ||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 127 cttctcaatttcgcatcttatgttgtatgctctgcaaaatttcctcaggcttggacagga 186 Query: 750 gcctcatcgacaccagttgcattggtacacatgcttctgaggttacctaatctcaagttc 809 |||||||| ||||| ||||| ||||| ||||||| | || || |||||| ||||||| Sbjct: 187 gcctcatcaacaccggttgctttggtgtccatgcttttaagattgcctaatatcaagttt 246 Query: 810 gttattgtaacccggggcgagaaaggttgcttaatgcttgaaagaagtatgacagatgct 869 |||||||||||| || || || || ||||| |||||||||||||| | ||||||||| Sbjct: 247 attattgtaacccttggagaaaagggatgcttgatgcttgaaagaagcacaacagatgct 306 Query: 870 tctgagaccgaggaaagtgatgtagaggatctgctagaatctttagagcagaaagtcgat 929 |||||| | ||||||| ||||||||| ||| || ||||| ||||| |||||| | | Sbjct: 307 tctgaggcagaggaaatagatgtagagagtcttctggaatcactagagaagaaagaagtt 366 Query: 930 ttgagttctagcatggcaaaatgcattgcttccaagtcaaatttgagaataagtgcagat 989 |||||||| |||||| |||||||||| || |||||||||||||||||||||||||||||| Sbjct: 367 ttgagttcaagcatgccaaaatgcatcgcctccaagtcaaatttgagaataagtgcagat 426 Query: 990 ggcgttggttcgatgagtggcaggttacttttgggtacagctgaagctataccctctgaa 1049 || | || || || |||||||| |||||||| || || || ||| ||||||||||||| Sbjct: 427 ggaataggatccatcagtggcagattacttttaggcactgccgaaattataccctctgaa 486 Query: 1050 gagctcatagatacaactggtgcaggtgatgcattcattggagccgttctatatggttta 1109 ||||||||||||||||||||||| ||||||||||| || ||||| ||||| || |||||| Sbjct: 487 gagctcatagatacaactggtgcgggtgatgcatttatcggagcagttctctacggttta 546 Query: 1110 tgcaccggcatgccagttgagaagatgttgcctttcgcagcacaagtggccgcttgcggc 1169 ||| | |||||||| |||||||||| ||||||| ||||| |||||||| |||||||| Sbjct: 547 tgctctggcatgccgcctgagaagatgctgccttttgcagctcaagtggctgcttgcggg 606 Query: 1170 tgcagagctttgggggccaggactggtcttcctcatc 1206 ||||| | ||| ||||| |||||| |||||| |||| Sbjct: 607 tgcaggggtttaggggctcggactgctcttccccatc 643
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 165 bits (83), Expect = 6e-37 Identities = 146/167 (87%) Strand = Plus / Plus Query: 183 ggctgcggcgccgtatctgtggactacctcgccaccgtcgcctctttccccaaccccgac 242 |||||||||||||| || | |||||||||||||||||||||||| ||||||||||||||| Sbjct: 28363627 ggctgcggcgccgtctccgcggactacctcgccaccgtcgcctccttccccaaccccgac 28363686 Query: 243 gacaagatccgcagcctcgcgctcaaggtcgagggaggcggcaacgccggcaacgccctc 302 ||||||||||| ||||| ||||||||||| |||||||||||||| | ||||| ||| | Sbjct: 28363687 gacaagatccgaagcctaacgctcaaggtccagggaggcggcaacactggcaatgccttg 28363746 Query: 303 accggagccgctcgcctgggcctcagcccaaggattatatccaaggt 349 |||| || ||||| ||||||| |||||||||| ||||||||||| Sbjct: 28363747 accgccgctgctcgtttgggccttcgcccaaggatcatatccaaggt 28363793 Score = 135 bits (68), Expect = 5e-28 Identities = 119/136 (87%) Strand = Plus / Plus Query: 964 agtcaaatttgagaataagtgcagatggcgttggttcgatgagtggcaggttacttttgg 1023 |||||||||||||||||||||||||||| | || || || |||||||| |||||||| | Sbjct: 28367154 agtcaaatttgagaataagtgcagatggaataggatccatcagtggcagattacttttag 28367213 Query: 1024 gtacagctgaagctataccctctgaagagctcatagatacaactggtgcaggtgatgcat 1083 | || || ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 28367214 gcactgccgaaattataccctctgaagagctcatagatacaactggtgcgggtgatgcat 28367273 Query: 1084 tcattggagccgttct 1099 | || ||||| ||||| Sbjct: 28367274 ttatcggagcagttct 28367289 Score = 103 bits (52), Expect = 2e-18 Identities = 127/152 (83%) Strand = Plus / Plus Query: 476 gaaaactcgtacttgcatacacactcctggttatcccccaatgaagccggaggagctcac 535 ||||||||||||||| || ||||||||||||||||| || ||| || || |||||||| Sbjct: 28364559 gaaaactcgtacttgtattcacactcctggttatcctcctatggtccctgaagagctcac 28364618 Query: 536 aaaggaaaacttgtttgctgctttacatggcgtagacatggtgtattttgatgttagact 595 | | |||||||||||||| |||||| | || | ||||| || ||||||||||| ||| | Sbjct: 28364619 acaagaaaacttgtttgccgctttagacggtgctgacattgtatattttgatgtcagatt 28364678 Query: 596 gcatgagactgctttgcttgttgcagaagagg 627 |||||| |||||||| || ||||| ||||||| Sbjct: 28364679 gcatgaaactgctttactagttgctgaagagg 28364710 Score = 99.6 bits (50), Expect = 3e-17 Identities = 98/114 (85%) Strand = Plus / Plus Query: 625 aggcaagccaaagaaaaatccctattttggtcgacgccgagaaaaagagggagggattgg 684 ||||||||||||||||| | ||||||||| | || ||||| |||||||| ||||||| Sbjct: 28365149 aggcaagccaaagaaaacttcctattttgattgatgccgaacggaagagggatggattgg 28365208 Query: 685 atgaccttctgaattttgcatcatatgttgtatgctctgcaaagtttcctcagg 738 | || ||||| ||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 28365209 acgagcttctcaatttcgcatcttatgttgtatgctctgcaaaatttcctcagg 28365262 Score = 75.8 bits (38), Expect = 4e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 735 caggcctggacaggagcctcatcgacaccagttgcattggtacacatgcttctgaggtta 794 ||||| ||||||||||||||||| ||||| ||||| ||||| ||||||| | || || Sbjct: 28366107 caggcttggacaggagcctcatcaacaccggttgctttggtgtccatgcttttaagattg 28366166 Query: 795 cctaatctcaagttcgttattgtaacccggggcgagaaaggttgcttaatgcttgaaaga 854 |||||| ||||||| |||||||||||| || || || || ||||| |||||||||||| Sbjct: 28366167 cctaatatcaagtttattattgtaacccttggagaaaagggatgcttgatgcttgaaaga 28366226 Query: 855 ag 856 || Sbjct: 28366227 ag 28366228 Score = 63.9 bits (32), Expect = 2e-06 Identities = 86/104 (82%) Strand = Plus / Plus Query: 862 cagatgcttctgagaccgaggaaagtgatgtagaggatctgctagaatctttagagcaga 921 |||||||||||||| | ||||||| ||||||||| ||| || ||||| ||||| ||| Sbjct: 28366728 cagatgcttctgaggcagaggaaatagatgtagagagtcttctggaatcactagagaaga 28366787 Query: 922 aagtcgatttgagttctagcatggcaaaatgcattgcttccaag 965 ||| | ||||||||| |||||| |||||||||| || |||||| Sbjct: 28366788 aagaagttttgagttcaagcatgccaaaatgcatcgcctccaag 28366831 Score = 50.1 bits (25), Expect = 0.023 Identities = 43/49 (87%) Strand = Plus / Plus Query: 346 aggtgtccaatgatgcactaggaaaaaacattctcaaggagctgcaaga 394 |||| |||||||| ||| ||||| ||| |||||||||||||||||||| Sbjct: 28363861 aggtatccaatgacccacaaggaagaaatattctcaaggagctgcaaga 28363909 Score = 46.1 bits (23), Expect = 0.35 Identities = 35/39 (89%) Strand = Plus / Plus Query: 438 aattcacccttcacctatataatcgtcgataaccagacg 476 |||||||| |||||||||||||| || || ||||||||| Sbjct: 28364033 aattcacctttcacctatataattgttgacaaccagacg 28364071
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 165 bits (83), Expect = 6e-37 Identities = 146/167 (87%) Strand = Plus / Plus Query: 183 ggctgcggcgccgtatctgtggactacctcgccaccgtcgcctctttccccaaccccgac 242 |||||||||||||| || | |||||||||||||||||||||||| ||||||||||||||| Sbjct: 92433 ggctgcggcgccgtctccgcggactacctcgccaccgtcgcctccttccccaaccccgac 92492 Query: 243 gacaagatccgcagcctcgcgctcaaggtcgagggaggcggcaacgccggcaacgccctc 302 ||||||||||| ||||| ||||||||||| |||||||||||||| | ||||| ||| | Sbjct: 92493 gacaagatccgaagcctaacgctcaaggtccagggaggcggcaacactggcaatgccttg 92552 Query: 303 accggagccgctcgcctgggcctcagcccaaggattatatccaaggt 349 |||| || ||||| ||||||| |||||||||| ||||||||||| Sbjct: 92553 accgccgctgctcgtttgggccttcgcccaaggatcatatccaaggt 92599 Score = 135 bits (68), Expect = 5e-28 Identities = 119/136 (87%) Strand = Plus / Plus Query: 964 agtcaaatttgagaataagtgcagatggcgttggttcgatgagtggcaggttacttttgg 1023 |||||||||||||||||||||||||||| | || || || |||||||| |||||||| | Sbjct: 95960 agtcaaatttgagaataagtgcagatggaataggatccatcagtggcagattacttttag 96019 Query: 1024 gtacagctgaagctataccctctgaagagctcatagatacaactggtgcaggtgatgcat 1083 | || || ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 96020 gcactgccgaaattataccctctgaagagctcatagatacaactggtgcgggtgatgcat 96079 Query: 1084 tcattggagccgttct 1099 | || ||||| ||||| Sbjct: 96080 ttatcggagcagttct 96095 Score = 103 bits (52), Expect = 2e-18 Identities = 127/152 (83%) Strand = Plus / Plus Query: 476 gaaaactcgtacttgcatacacactcctggttatcccccaatgaagccggaggagctcac 535 ||||||||||||||| || ||||||||||||||||| || ||| || || |||||||| Sbjct: 93365 gaaaactcgtacttgtattcacactcctggttatcctcctatggtccctgaagagctcac 93424 Query: 536 aaaggaaaacttgtttgctgctttacatggcgtagacatggtgtattttgatgttagact 595 | | |||||||||||||| |||||| | || | ||||| || ||||||||||| ||| | Sbjct: 93425 acaagaaaacttgtttgccgctttagacggtgctgacattgtatattttgatgtcagatt 93484 Query: 596 gcatgagactgctttgcttgttgcagaagagg 627 |||||| |||||||| || ||||| ||||||| Sbjct: 93485 gcatgaaactgctttactagttgctgaagagg 93516 Score = 99.6 bits (50), Expect = 3e-17 Identities = 98/114 (85%) Strand = Plus / Plus Query: 625 aggcaagccaaagaaaaatccctattttggtcgacgccgagaaaaagagggagggattgg 684 ||||||||||||||||| | ||||||||| | || ||||| |||||||| ||||||| Sbjct: 93955 aggcaagccaaagaaaacttcctattttgattgatgccgaacggaagagggatggattgg 94014 Query: 685 atgaccttctgaattttgcatcatatgttgtatgctctgcaaagtttcctcagg 738 | || ||||| ||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 94015 acgagcttctcaatttcgcatcttatgttgtatgctctgcaaaatttcctcagg 94068 Score = 75.8 bits (38), Expect = 4e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 735 caggcctggacaggagcctcatcgacaccagttgcattggtacacatgcttctgaggtta 794 ||||| ||||||||||||||||| ||||| ||||| ||||| ||||||| | || || Sbjct: 94913 caggcttggacaggagcctcatcaacaccggttgctttggtgtccatgcttttaagattg 94972 Query: 795 cctaatctcaagttcgttattgtaacccggggcgagaaaggttgcttaatgcttgaaaga 854 |||||| ||||||| |||||||||||| || || || || ||||| |||||||||||| Sbjct: 94973 cctaatatcaagtttattattgtaacccttggagaaaagggatgcttgatgcttgaaaga 95032 Query: 855 ag 856 || Sbjct: 95033 ag 95034 Score = 63.9 bits (32), Expect = 2e-06 Identities = 86/104 (82%) Strand = Plus / Plus Query: 862 cagatgcttctgagaccgaggaaagtgatgtagaggatctgctagaatctttagagcaga 921 |||||||||||||| | ||||||| ||||||||| ||| || ||||| ||||| ||| Sbjct: 95534 cagatgcttctgaggcagaggaaatagatgtagagagtcttctggaatcactagagaaga 95593 Query: 922 aagtcgatttgagttctagcatggcaaaatgcattgcttccaag 965 ||| | ||||||||| |||||| |||||||||| || |||||| Sbjct: 95594 aagaagttttgagttcaagcatgccaaaatgcatcgcctccaag 95637 Score = 50.1 bits (25), Expect = 0.023 Identities = 43/49 (87%) Strand = Plus / Plus Query: 346 aggtgtccaatgatgcactaggaaaaaacattctcaaggagctgcaaga 394 |||| |||||||| ||| ||||| ||| |||||||||||||||||||| Sbjct: 92667 aggtatccaatgacccacaaggaagaaatattctcaaggagctgcaaga 92715 Score = 46.1 bits (23), Expect = 0.35 Identities = 35/39 (89%) Strand = Plus / Plus Query: 438 aattcacccttcacctatataatcgtcgataaccagacg 476 |||||||| |||||||||||||| || || ||||||||| Sbjct: 92839 aattcacctttcacctatataattgttgacaaccagacg 92877
>emb|CT829533.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA030F16, full insert sequence Length = 374 Score = 97.6 bits (49), Expect = 1e-16 Identities = 118/141 (83%) Strand = Plus / Plus Query: 1066 ctggtgcaggtgatgcattcattggagccgttctatatggtttatgcaccggcatgccag 1125 ||||||| ||||||||||| || ||||| ||||| || ||||||||| | |||||||| Sbjct: 1 ctggtgcgggtgatgcatttatcggagcagttctctacggtttatgctctggcatgccgc 60 Query: 1126 ttgagaagatgttgcctttcgcagcacaagtggccgcttgcggctgcagagctttggggg 1185 |||||||||| ||||||| ||||| |||||||| |||||||| ||||| | ||| |||| Sbjct: 61 ctgagaagatgctgccttttgcagctcaagtggctgcttgcgggtgcaggggtttagggg 120 Query: 1186 ccaggactggtcttcctcatc 1206 | |||||| |||||| |||| Sbjct: 121 ctcggactgctcttccccatc 141
>emb|BX826790.1|CNS0A39V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZB06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1327 Score = 75.8 bits (38), Expect = 4e-10 Identities = 128/158 (81%) Strand = Plus / Plus Query: 1047 gaagagctcatagatacaactggtgcaggtgatgcattcattggagccgttctatatggt 1106 |||||||| |||| || |||||||| || ||||||||||| ||||| |||||||||| | Sbjct: 1048 gaagagcttgtagacaccactggtgctggcgatgcattcataggagctgttctatatgct 1107 Query: 1107 ttatgcaccggcatgccagttgagaagatgttgcctttcgcagcacaagtggccgcttgc 1166 ||||| |||||||||| ||||| ||||| || || || || |||||||| | |||| Sbjct: 1108 atatgcgccggcatgcccccagagaaaatgttaccatttgctgctcaagtggctggttgc 1167 Query: 1167 ggctgcagagctttgggggccaggactggtcttcctca 1204 ||||| | ||||||||||| | || ||||||||||| Sbjct: 1168 tgctgccgggctttgggggctcgcacgggtcttcctca 1205
>emb|BX826398.1|CNS0A382 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZD03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 389 Score = 67.9 bits (34), Expect = 1e-07 Identities = 127/158 (80%) Strand = Plus / Plus Query: 1047 gaagagctcatagatacaactggtgcaggtgatgcattcattggagccgttctatatggt 1106 |||||||| |||| || |||||||| || ||||||||||| ||||| |||||||||| Sbjct: 72 gaagagcttgtagacaccactggtgctggcgatgcattcataggagctgttctatatgcc 131 Query: 1107 ttatgcaccggcatgccagttgagaagatgttgcctttcgcagcacaagtggccgcttgc 1166 ||||| |||||||||| ||||| ||||| || || || || |||||||| | |||| Sbjct: 132 atatgcgccggcatgcccccagagaaaatgttaccatttgctgctcaagtggctggttgc 191 Query: 1167 ggctgcagagctttgggggccaggactggtcttcctca 1204 |||||| | |||||||| || | || ||||||||||| Sbjct: 192 ggctgccgggctttgggagctcgcacgggtcttcctca 229
>gb|AY817111.1| Lycopersicon cheesmaniae peroxisomal acyl-CoA oxidase 1A (Acx1A) gene, complete cds Length = 30000 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Minus Query: 1059 gatacaactggtgcaggtgatgcattcattggagccgttctatatggt 1106 |||||||| ||||||||||||||||| |||||||| ||||| |||||| Sbjct: 2837 gatacaaccggtgcaggtgatgcatttattggagcagttctgtatggt 2790
>emb|CT833229.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA128D06, full insert sequence Length = 1593 Score = 61.9 bits (31), Expect = 6e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 237 cccgacgacaagatccgcagcctcgcgctcaaggtcgagggaggcggcaacgccggcaac 296 ||||||||||||||||||||| || ||| |||| ||||| ||||||||||| ||| Sbjct: 336 cccgacgacaagatccgcagcggcgagctgcaggtgtctggaggtggcaacgccgggaac 395 Query: 297 gccctcaccggagccgctcgcctgggcctca 327 || || || |||||||| ||||||||||||| Sbjct: 396 gcgctgacaggagccgcccgcctgggcctca 426
>ref|NM_001071335.1| Oryza sativa (japonica cultivar-group) Os10g0465900 (Os10g0465900) mRNA, complete cds Length = 1616 Score = 61.9 bits (31), Expect = 6e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 237 cccgacgacaagatccgcagcctcgcgctcaaggtcgagggaggcggcaacgccggcaac 296 ||||||||||||||||||||| || ||| |||| ||||| ||||||||||| ||| Sbjct: 296 cccgacgacaagatccgcagcggcgagctgcaggtgtctggaggtggcaacgccgggaac 355 Query: 297 gccctcaccggagccgctcgcctgggcctca 327 || || || |||||||| ||||||||||||| Sbjct: 356 gcgctgacaggagccgcccgcctgggcctca 386
>dbj|AK110879.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-G06, full insert sequence Length = 1616 Score = 61.9 bits (31), Expect = 6e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 237 cccgacgacaagatccgcagcctcgcgctcaaggtcgagggaggcggcaacgccggcaac 296 ||||||||||||||||||||| || ||| |||| ||||| ||||||||||| ||| Sbjct: 296 cccgacgacaagatccgcagcggcgagctgcaggtgtctggaggtggcaacgccgggaac 355 Query: 297 gccctcaccggagccgctcgcctgggcctca 327 || || || |||||||| ||||||||||||| Sbjct: 356 gcgctgacaggagccgcccgcctgggcctca 386
>emb|BX826803.1|CNS0A34N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB64ZB10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1265 Score = 61.9 bits (31), Expect = 6e-06 Identities = 112/139 (80%) Strand = Plus / Plus Query: 1047 gaagagctcatagatacaactggtgcaggtgatgcattcattggagccgttctatatggt 1106 |||||||| |||| || |||||||| || ||||||||||| ||||| |||||||||| Sbjct: 965 gaagagcttgtagacactactggtgctggcgatgcattcataggagctgttctatatgcg 1024 Query: 1107 ttatgcaccggcatgccagttgagaagatgttgcctttcgcagcacaagtggccgcttgc 1166 ||||| |||||||||| ||||| ||||| || || || || |||||||| | |||| Sbjct: 1025 atatgcgccggcatgccgccagagaaaatgttaccatttgctgctcaagtggctggttgc 1084 Query: 1167 ggctgcagagctttggggg 1185 ||||| | |||||||||| Sbjct: 1085 tgctgccgggctttggggg 1103
>ref|NM_119014.3| Arabidopsis thaliana kinase/ ribokinase (AT4G28706) mRNA, complete cds Length = 1379 Score = 60.0 bits (30), Expect = 2e-05 Identities = 126/158 (79%) Strand = Plus / Plus Query: 1047 gaagagctcatagatacaactggtgcaggtgatgcattcattggagccgttctatatggt 1106 |||||||| |||| || |||||||| || ||||||||||| ||||| |||||||||| Sbjct: 1062 gaagagcttgtagacaccactggtgctggcgatgcattcataggagctgttctatatgcc 1121 Query: 1107 ttatgcaccggcatgccagttgagaagatgttgcctttcgcagcacaagtggccgcttgc 1166 ||||| |||||||||| ||||| ||||| || || || || |||||||| | |||| Sbjct: 1122 atatgcgccggcatgcccccagagaaaatgttaccatttgctgctcaagtggctggttgc 1181 Query: 1167 ggctgcagagctttgggggccaggactggtcttcctca 1204 ||||| | |||||||| || | || ||||||||||| Sbjct: 1182 agctgccgggctttgggagctcgcacgggtcttcctca 1219
>ref|NM_202903.1| Arabidopsis thaliana kinase/ ribokinase (AT4G28706) mRNA, complete cds Length = 1385 Score = 60.0 bits (30), Expect = 2e-05 Identities = 126/158 (79%) Strand = Plus / Plus Query: 1047 gaagagctcatagatacaactggtgcaggtgatgcattcattggagccgttctatatggt 1106 |||||||| |||| || |||||||| || ||||||||||| ||||| |||||||||| Sbjct: 1068 gaagagcttgtagacaccactggtgctggcgatgcattcataggagctgttctatatgcc 1127 Query: 1107 ttatgcaccggcatgccagttgagaagatgttgcctttcgcagcacaagtggccgcttgc 1166 ||||| |||||||||| ||||| ||||| || || || || |||||||| | |||| Sbjct: 1128 atatgcgccggcatgcccccagagaaaatgttaccatttgctgctcaagtggctggttgc 1187 Query: 1167 ggctgcagagctttgggggccaggactggtcttcctca 1204 ||||| | |||||||| || | || ||||||||||| Sbjct: 1188 agctgccgggctttgggagctcgcacgggtcttcctca 1225
>ref|NM_179135.2| Arabidopsis thaliana kinase/ ribokinase (AT4G28706) mRNA, complete cds Length = 1388 Score = 60.0 bits (30), Expect = 2e-05 Identities = 126/158 (79%) Strand = Plus / Plus Query: 1047 gaagagctcatagatacaactggtgcaggtgatgcattcattggagccgttctatatggt 1106 |||||||| |||| || |||||||| || ||||||||||| ||||| |||||||||| Sbjct: 1071 gaagagcttgtagacaccactggtgctggcgatgcattcataggagctgttctatatgcc 1130 Query: 1107 ttatgcaccggcatgccagttgagaagatgttgcctttcgcagcacaagtggccgcttgc 1166 ||||| |||||||||| ||||| ||||| || || || || |||||||| | |||| Sbjct: 1131 atatgcgccggcatgcccccagagaaaatgttaccatttgctgctcaagtggctggttgc 1190 Query: 1167 ggctgcagagctttgggggccaggactggtcttcctca 1204 ||||| | |||||||| || | || ||||||||||| Sbjct: 1191 agctgccgggctttgggagctcgcacgggtcttcctca 1228
>gb|AY128740.1| Arabidopsis thaliana unknown protein (At4g28706) mRNA, complete cds Length = 1273 Score = 60.0 bits (30), Expect = 2e-05 Identities = 126/158 (79%) Strand = Plus / Plus Query: 1047 gaagagctcatagatacaactggtgcaggtgatgcattcattggagccgttctatatggt 1106 |||||||| |||| || |||||||| || ||||||||||| ||||| |||||||||| Sbjct: 1021 gaagagcttgtagacaccactggtgctggcgatgcattcataggagctgttctatatgcc 1080 Query: 1107 ttatgcaccggcatgccagttgagaagatgttgcctttcgcagcacaagtggccgcttgc 1166 ||||| |||||||||| ||||| ||||| || || || || |||||||| | |||| Sbjct: 1081 atatgcgccggcatgcccccagagaaaatgttaccatttgctgctcaagtggctggttgc 1140 Query: 1167 ggctgcagagctttgggggccaggactggtcttcctca 1204 ||||| | |||||||| || | || ||||||||||| Sbjct: 1141 agctgccgggctttgggagctcgcacgggtcttcctca 1178
>gb|AY125545.1| Arabidopsis thaliana At4g29227 mRNA, complete cds Length = 1206 Score = 60.0 bits (30), Expect = 2e-05 Identities = 126/158 (79%) Strand = Plus / Plus Query: 1047 gaagagctcatagatacaactggtgcaggtgatgcattcattggagccgttctatatggt 1106 |||||||| |||| || |||||||| || ||||||||||| ||||| |||||||||| Sbjct: 1012 gaagagcttgtagacaccactggtgctggcgatgcattcataggagctgttctatatgcc 1071 Query: 1107 ttatgcaccggcatgccagttgagaagatgttgcctttcgcagcacaagtggccgcttgc 1166 ||||| |||||||||| ||||| ||||| || || || || |||||||| | |||| Sbjct: 1072 atatgcgccggcatgcccccagagaaaatgttaccatttgctgctcaagtggctggttgc 1131 Query: 1167 ggctgcagagctttgggggccaggactggtcttcctca 1204 ||||| | |||||||| || | || ||||||||||| Sbjct: 1132 agctgccgggctttgggagctcgcacgggtcttcctca 1169
>gb|AY065095.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 1384 Score = 60.0 bits (30), Expect = 2e-05 Identities = 126/158 (79%) Strand = Plus / Plus Query: 1047 gaagagctcatagatacaactggtgcaggtgatgcattcattggagccgttctatatggt 1106 |||||||| |||| || |||||||| || ||||||||||| ||||| |||||||||| Sbjct: 1071 gaagagcttgtagacaccactggtgctggcgatgcattcataggagctgttctatatgcc 1130 Query: 1107 ttatgcaccggcatgccagttgagaagatgttgcctttcgcagcacaagtggccgcttgc 1166 ||||| |||||||||| ||||| ||||| || || || || |||||||| | |||| Sbjct: 1131 atatgcgccggcatgcccccagagaaaatgttaccatttgctgctcaagtggctggttgc 1190 Query: 1167 ggctgcagagctttgggggccaggactggtcttcctca 1204 ||||| | |||||||| || | || ||||||||||| Sbjct: 1191 agctgccgggctttgggagctcgcacgggtcttcctca 1228
>gb|AF428378.1|AF428378 Arabidopsis thaliana At4g29227 mRNA, complete cds Length = 1378 Score = 60.0 bits (30), Expect = 2e-05 Identities = 126/158 (79%) Strand = Plus / Plus Query: 1047 gaagagctcatagatacaactggtgcaggtgatgcattcattggagccgttctatatggt 1106 |||||||| |||| || |||||||| || ||||||||||| ||||| |||||||||| Sbjct: 1062 gaagagcttgtagacaccactggtgctggcgatgcattcataggagctgttctatatgcc 1121 Query: 1107 ttatgcaccggcatgccagttgagaagatgttgcctttcgcagcacaagtggccgcttgc 1166 ||||| |||||||||| ||||| ||||| || || || || |||||||| | |||| Sbjct: 1122 atatgcgccggcatgcccccagagaaaatgttaccatttgctgctcaagtggctggttgc 1181 Query: 1167 ggctgcagagctttgggggccaggactggtcttcctca 1204 ||||| | |||||||| || | || ||||||||||| Sbjct: 1182 agctgccgggctttgggagctcgcacgggtcttcctca 1219
>emb|BX827195.1|CNS0A3CY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1343 Score = 60.0 bits (30), Expect = 2e-05 Identities = 126/158 (79%) Strand = Plus / Plus Query: 1047 gaagagctcatagatacaactggtgcaggtgatgcattcattggagccgttctatatggt 1106 |||||||| |||| || |||||||| || ||||||||||| ||||| |||||||||| Sbjct: 1065 gaagagcttgtagacaccactggtgctggcgatgcattcataggagctgttctatatgcc 1124 Query: 1107 ttatgcaccggcatgccagttgagaagatgttgcctttcgcagcacaagtggccgcttgc 1166 ||||| |||||||||| ||||| ||||| || || || || |||||||| | |||| Sbjct: 1125 atatgcgccggcatgcccccagagaaaatgttaccatttgctgctcaagtggctggttgc 1184 Query: 1167 ggctgcagagctttgggggccaggactggtcttcctca 1204 ||||| | |||||||| || | || ||||||||||| Sbjct: 1185 agctgccgggctttgggagctcgcacgggtcttcctca 1222
>emb|BX828281.1|CNS0A2ZJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH70ZF05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1319 Score = 60.0 bits (30), Expect = 2e-05 Identities = 126/158 (79%) Strand = Plus / Plus Query: 1047 gaagagctcatagatacaactggtgcaggtgatgcattcattggagccgttctatatggt 1106 |||||||| |||| || |||||||| || ||||||||||| ||||| |||||||||| Sbjct: 1044 gaagagcttgtagacaccactggtgctggcgatgcattcataggagctgttctatatgcc 1103 Query: 1107 ttatgcaccggcatgccagttgagaagatgttgcctttcgcagcacaagtggccgcttgc 1166 ||||| |||||||||| ||||| ||||| || || || || |||||||| | |||| Sbjct: 1104 atatgcgccggcatgcccccagagaaaatgttaccatttgctgctcaagtggctggttgc 1163 Query: 1167 ggctgcagagctttgggggccaggactggtcttcctca 1204 ||||| | |||||||| || | || ||||||||||| Sbjct: 1164 agctgccgggctttgggagctcgcacgggtcttcctca 1201
>emb|BX826400.1|CNS0A38O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZE03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 389 Score = 60.0 bits (30), Expect = 2e-05 Identities = 126/158 (79%) Strand = Plus / Plus Query: 1047 gaagagctcatagatacaactggtgcaggtgatgcattcattggagccgttctatatggt 1106 |||||||| |||| || |||||||| || ||||||||||| ||||| |||||||||| Sbjct: 72 gaagagcttgtagacaccactggtgctggcgatgcattcataggagctgttctatatgcc 131 Query: 1107 ttatgcaccggcatgccagttgagaagatgttgcctttcgcagcacaagtggccgcttgc 1166 ||||| |||||||||| ||||| ||||| || || || || |||||||| | |||| Sbjct: 132 atatgcgccggcatgcccccagagaaaatgttaccatttgctgctcaagtggctggttgc 191 Query: 1167 ggctgcagagctttgggggccaggactggtcttcctca 1204 ||||| | |||||||| || | || ||||||||||| Sbjct: 192 agctgccgggctttgggagctcgcacgggtcttcctca 229
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 56.0 bits (28), Expect = 4e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 276 ggaggcggcaacgccggcaacgccctcaccggagccgctcgcctgggcctca 327 ||||| ||||||||||| ||||| || || |||||||| ||||||||||||| Sbjct: 16596 ggaggtggcaacgccgggaacgcgctgacaggagccgcccgcctgggcctca 16647 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 cccgacgacaagatccgcagc 257 ||||||||||||||||||||| Sbjct: 16442 cccgacgacaagatccgcagc 16462
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 56.0 bits (28), Expect = 4e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 276 ggaggcggcaacgccggcaacgccctcaccggagccgctcgcctgggcctca 327 ||||| ||||||||||| ||||| || || |||||||| ||||||||||||| Sbjct: 16672079 ggaggtggcaacgccgggaacgcgctgacaggagccgcccgcctgggcctca 16672130 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 cccgacgacaagatccgcagc 257 ||||||||||||||||||||| Sbjct: 16671925 cccgacgacaagatccgcagc 16671945
>emb|AL161573.2|ATCHRIV69 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 69 Length = 197655 Score = 56.0 bits (28), Expect = 4e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 1047 gaagagctcatagatacaactggtgcaggtgatgcattcattggagccgttctatatggt 1106 |||||||| |||| || |||||||| || ||||||||||| ||||| |||||||||||| Sbjct: 90759 gaagagcttgtagacaccactggtgctggcgatgcattcataggagctgttctatatggt 90818
>emb|AL035353.1|ATF16A16 Arabidopsis thaliana DNA chromosome 4, BAC clone F16A16 (ESSAII project) Length = 97155 Score = 56.0 bits (28), Expect = 4e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 1047 gaagagctcatagatacaactggtgcaggtgatgcattcattggagccgttctatatggt 1106 |||||||| |||| || |||||||| || ||||||||||| ||||| |||||||||||| Sbjct: 86308 gaagagcttgtagacaccactggtgctggcgatgcattcataggagctgttctatatggt 86249
>emb|BX828814.1|CNS0A2Q5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL41ZA10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1261 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 1065 actggtgcaggtgatgcattcattggagccgttctatatggtttatgcaccggcatgcc 1123 |||||||| || ||||||||||| ||||| |||||||||| ||||| |||||||||| Sbjct: 998 actggtgctggcgatgcattcataggagctgttctatatgccatatgcgccggcatgcc 1056
>emb|BX826544.1|CNS0A3A8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB37ZH07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1314 Score = 52.0 bits (26), Expect = 0.006 Identities = 50/58 (86%) Strand = Plus / Plus Query: 1047 gaagagctcatagatacaactggtgcaggtgatgcattcattggagccgttctatatg 1104 |||||||| |||| || |||||||| || ||||||||||| ||||| |||||||||| Sbjct: 1044 gaagagcttgtagacaccactggtgctggcgatgcattcataggagctgttctatatg 1101
>gb|AC151957.1| Solanum tuberosum chromosome 5 clone PGEC13, complete sequence Length = 135933 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 567 gtagacatggtgtattttgatgt 589 ||||||||||||||||||||||| Sbjct: 128523 gtagacatggtgtattttgatgt 128545
>gb|AC133341.11| Medicago truncatula clone mth2-28i3, complete sequence Length = 138850 Score = 44.1 bits (22), Expect = 1.4 Identities = 61/74 (82%) Strand = Plus / Plus Query: 276 ggaggcggcaacgccggcaacgccctcaccggagccgctcgcctgggcctcagcccaagg 335 |||||||||||| | ||||||||| | ||| | || |||||| |||| |||| |||||| Sbjct: 97217 ggaggcggcaacacaggcaacgccttaacctgcgcagctcgcttggggctcaagccaagg 97276 Query: 336 attatatccaaggt 349 || || |||||||| Sbjct: 97277 atcatctccaaggt 97290
>gb|AE006394.1| Lactococcus lactis subsp. lactis IL1403 section 156 of 218 of the complete genome Length = 10685 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1057 tagatacaactggtgcaggtgatgcattca 1086 ||||||||||||||||||| ||| |||||| Sbjct: 6521 tagatacaactggtgcaggagatacattca 6492
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1405 gatatatactcatagtggcttc 1426 |||||||||||||||||||||| Sbjct: 172851 gatatatactcatagtggcttc 172830 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1405 gatatatactcatagtggcttc 1426 |||||||||||||||||||||| Sbjct: 264748 gatatatactcatagtggcttc 264727
>gb|DQ352559.1| Thermotoga sp. RQ7, DNA joint XIII-XIII' sequence Length = 1964 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1251 caggatcagtttctgtttcctt 1272 |||||||||||||||||||||| Sbjct: 1964 caggatcagtttctgtttcctt 1943
>gb|DQ352558.1| Thermotoga neapolitana NS-E, DNA joint XIII-XIII' sequence Length = 1455 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1251 caggatcagtttctgtttcctt 1272 |||||||||||||||||||||| Sbjct: 14 caggatcagtttctgtttcctt 35
>gb|U64817.1|LEU64817 Lycopersicon esculentum fructokinase (Frk1) mRNA, complete cds Length = 1887 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1059 gatacaactggtgcaggtgatgcatt 1084 |||||||||||||| ||||||||||| Sbjct: 1105 gatacaactggtgctggtgatgcatt 1130
>gb|AC165424.2| Mus musculus BAC clone RP24-68L23 from chromosome 17, complete sequence Length = 178781 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 ctcacaaaggaaaacttgttt 551 ||||||||||||||||||||| Sbjct: 62736 ctcacaaaggaaaacttgttt 62716
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 ggcggcaacgccggcaacgcc 299 ||||||||||||||||||||| Sbjct: 1631514 ggcggcaacgccggcaacgcc 1631494
>gb|CP000114.1| Streptococcus agalactiae A909, complete genome Length = 2127839 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1059 gatacaactggtgcaggtgat 1079 ||||||||||||||||||||| Sbjct: 129810 gatacaactggtgcaggtgat 129790
>gb|AC162281.3| Mus musculus chromosome 1, clone RP24-398O5, complete sequence Length = 162097 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 cataaagaaaataaaaatgat 55 ||||||||||||||||||||| Sbjct: 81908 cataaagaaaataaaaatgat 81928
>gb|AC125155.4| Mus musculus BAC clone RP24-380D9 from chromosome 6, complete sequence Length = 173003 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1005 agtggcaggttacttttgggt 1025 ||||||||||||||||||||| Sbjct: 88585 agtggcaggttacttttgggt 88565
>gb|AE014196.1| Streptococcus agalactiae 2603V/R section 6 of 100 of the complete genome Length = 28866 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1059 gatacaactggtgcaggtgat 1079 ||||||||||||||||||||| Sbjct: 23349 gatacaactggtgcaggtgat 23329
>ref|XM_722112.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06543) partial mRNA Length = 4182 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 ataaagaaaataaaaatgatg 56 ||||||||||||||||||||| Sbjct: 1757 ataaagaaaataaaaatgatg 1777
>gb|AC093832.2| Homo sapiens BAC clone RP11-402L11 from 4, complete sequence Length = 187232 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1002 atgagtggcaggttacttttg 1022 ||||||||||||||||||||| Sbjct: 10499 atgagtggcaggttacttttg 10519
>emb|CR626910.5| Zebrafish DNA sequence from clone DKEY-204E20 in linkage group 14, complete sequence Length = 168298 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 755 atcgacaccagttgcattggt 775 ||||||||||||||||||||| Sbjct: 37872 atcgacaccagttgcattggt 37892
>emb|AL591890.31| Human DNA sequence from clone RP11-54A22 on chromosome 9 Contains three novel genes, and the 5' end of the COL5A1 gene for collagen (type V) alpha 1, and a CpG island, complete sequence Length = 173415 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1018 ttttgggtacagctgaagctatacc 1042 |||||| |||||||||||||||||| Sbjct: 20532 ttttggatacagctgaagctatacc 20556
>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13 Length = 348264 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 ggcggcaacgccggcaacgcc 299 ||||||||||||||||||||| Sbjct: 248590 ggcggcaacgccggcaacgcc 248570
>emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 6/14 Length = 300050 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 ggcggcaacgccggcaacgcc 299 ||||||||||||||||||||| Sbjct: 13953 ggcggcaacgccggcaacgcc 13933
>emb|AL766843.1|SAG766843 Streptococcus agalactiae NEM316 complete genome, segment 1 Length = 143050 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1059 gatacaactggtgcaggtgat 1079 ||||||||||||||||||||| Sbjct: 128598 gatacaactggtgcaggtgat 128578
>emb|BX005429.13| Zebrafish DNA sequence from clone DKEY-85K15 in linkage group 16, complete sequence Length = 173571 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 ttgcataaagaaaataaaaat 52 ||||||||||||||||||||| Sbjct: 101924 ttgcataaagaaaataaaaat 101904
>dbj|AP002379.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-463F4, complete sequence Length = 215986 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 ataaagaaaataaaaatgatg 56 ||||||||||||||||||||| Sbjct: 112123 ataaagaaaataaaaatgatg 112143
>dbj|AP003730.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-379J13, complete sequences Length = 226171 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 ataaagaaaataaaaatgatg 56 ||||||||||||||||||||| Sbjct: 195242 ataaagaaaataaaaatgatg 195262
>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome Length = 1767403 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1059 gatacaactggtgcaggtgatgcat 1083 ||||||||||||||||| ||||||| Sbjct: 86263 gatacaactggtgcaggagatgcat 86287
>gb|AC122448.3| Mus musculus BAC clone RP24-243B16 from 15, complete sequence Length = 159923 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 789 aggttacctaatctcaagttc 809 ||||||||||||||||||||| Sbjct: 16660 aggttacctaatctcaagttc 16640 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 253,425,726 Number of extensions: 13937813 Number of successful extensions: 321159 Number of sequences better than 10.0: 54 Number of HSP's gapped: 321148 Number of HSP's successfully gapped: 76 Length of query: 1448 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1425 Effective length of database: 18,503,978,556 Effective search space: 26368169442300 Effective search space used: 26368169442300 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)