ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf36j13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK073916:Os02g0676000 612 e-175
2AK059030:Os02g0676000 201 7e-52
3AK064743:Os01g0871100 31 1.6
4AK073567:Os10g0524100 31 2.1
5Os08g0154900:Os08g0154900 30 2.8
6AK103018:Os09g0555200 29 8.0
7AK109871:Os04g0530100 29 8.0
8AF403128:Os04g0632500 29 8.0

>AK073916:Os02g0676000 |
          Length = 459
 Score =  612 bits (1577), Expect = e-175
 Identities = 290/331 (87%), Positives = 312/331 (94%)
 Frame = +1

Query: 1    IDATGALMVLTLKVISCSMNYSDGLLKEEEGLRDAQKKYRLTTMPSLVEYFGYCLCCGSH 180
            IDATGALMVLTLK+ISC++NYSDG+LKEE GLRDAQKKYRL  +PSL+EYFGYCLCCGSH
Sbjct: 116  IDATGALMVLTLKIISCAINYSDGMLKEE-GLRDAQKKYRLAKLPSLIEYFGYCLCCGSH 174

Query: 181  FAGPVYEMKDYLEWTERKGIWASSTPSPLLPTLRALVQAGICMGLYLYLSPMFPLSRFSE 360
            FAGPVYEMKDYLE+TERKG+WAS TPSPLLPTLRALVQAG CMGLYLYLSP FPLSRFSE
Sbjct: 175  FAGPVYEMKDYLEYTERKGLWASPTPSPLLPTLRALVQAGACMGLYLYLSPQFPLSRFSE 234

Query: 361  PLYYEWGFWHRLFFQYMSGFTARWKYYFIWSVSEAAIIISGLGFTGWSDSSPPKAKWDRA 540
            PLYYEWGFWHRLF+QYMSGFTARWKYYFIWS+SEAAIIISGLGF+GWSDSSPPKAKWDRA
Sbjct: 235  PLYYEWGFWHRLFYQYMSGFTARWKYYFIWSLSEAAIIISGLGFSGWSDSSPPKAKWDRA 294

Query: 541  INVDILGVELAGSAAQLPLKWNIQVSTWLRYYVYERLIQKGKKPGFLQLLGTQTVSAIWH 720
             NVD+LGVELA SA QLPL WNIQVSTWLRYYVYERL+QKGKKPGFLQLLGTQTVSA+WH
Sbjct: 295  KNVDVLGVELATSAVQLPLMWNIQVSTWLRYYVYERLVQKGKKPGFLQLLGTQTVSAVWH 354

Query: 721  GLYPGYMIFFVQSALMINGSKVIYRWQQAVSNSGLRTILSLLNCAYTMMVLNYSCIGFQV 900
            GLYPGY+IFFVQSALMINGSKVIYRWQQAVSN     IL  +N +YT+MVLNYSCIGFQV
Sbjct: 355  GLYPGYIIFFVQSALMINGSKVIYRWQQAVSNPVFHAILVFVNFSYTLMVLNYSCIGFQV 414

Query: 901  LSFQETLASYKSVYYVGTIVPILCVLLGYVI 993
            LSF+ETLASY+SVYY+GTIVPI+ VLLGYVI
Sbjct: 415  LSFKETLASYQSVYYIGTIVPIVVVLLGYVI 445



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>AK059030:Os02g0676000 |
          Length = 130

 Score =  201 bits (512), Expect = 7e-52
 Identities = 97/116 (83%), Positives = 107/116 (92%)
 Frame = +1

Query: 646 RLIQKGKKPGFLQLLGTQTVSAIWHGLYPGYMIFFVQSALMINGSKVIYRWQQAVSNSGL 825
           RL+QKGKKPGFLQLLGTQTVSA+WHGLYPGY+IFFVQSALMINGSKVIYRWQQAVSN   
Sbjct: 1   RLVQKGKKPGFLQLLGTQTVSAVWHGLYPGYIIFFVQSALMINGSKVIYRWQQAVSNPVF 60

Query: 826 RTILSLLNCAYTMMVLNYSCIGFQVLSFQETLASYKSVYYVGTIVPILCVLLGYVI 993
             IL  +N +YT+MVLNYSCIGFQVLSF+ETLASY+SVYY+GTIVPI+ VLLGYVI
Sbjct: 61  HAILVFVNFSYTLMVLNYSCIGFQVLSFKETLASYQSVYYIGTIVPIVVVLLGYVI 116



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>AK064743:Os01g0871100 |
          Length = 582

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 819 RPPHYPVFTKLCIHHDGA*LLMHWLPGTELPGDLGILQE 935
           RPP +    +L   HDG  + + WL  T+  G  GIL E
Sbjct: 111 RPPSFTYKRQLYTVHDGGTIALDWLLATDSKGSDGILSE 149



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>AK073567:Os10g0524100 |
          Length = 347

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
 Frame = +1

Query: 202 MKDYLEWTERKGIWASSTPSPLLPTLRALVQAGICMGLYLYLSPMFPLSRFSEPLYYEW- 378
           +K + +W  ++        S  L  L  LVQ    +  +L LS   PL   ++  YYE+ 
Sbjct: 108 VKYHGKWPMKRASVFQEPISAALSALSLLVQFNGWLSFFLLLSYKLPLRPETQMTYYEYT 167

Query: 379 GFWHRLFFQYMSGFTARWKYYFIWSV-SEAAIIISGLGFTGWS 504
           G WH      M+ +  R  Y+   +V +E     S   F G+S
Sbjct: 168 GLWHIYGLLAMNAWFWRAIYHSCDTVWTEKLYYSSFAAFIGYS 210



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>Os08g0154900:Os08g0154900 |
          Length = 728

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = +1

Query: 406 YMSGFTARWKYYFIWSVSEAAIIIS----GLGFTGWSDSSPPKAKWDRAINVDILGV 564
           Y + F  R   +F   VS   ++I+    G G+  W DS+     W ++I VD +GV
Sbjct: 445 YEADFPERGVRFFAEKVSHHPMLIACHCEGKGWKFWGDSNLKSKFWGQSIQVDPIGV 501



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>AK103018:Os09g0555200 |
          Length = 318

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +3

Query: 732 RIYDILCSVGIDDKW 776
           R+YDI CS GID  W
Sbjct: 11  RVYDIFCSYGIDSAW 25



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>AK109871:Os04g0530100 |
          Length = 87

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 139 LVEYFGYCLCCGSHFAGPVYEMKDYLEWTERKGIWASS 252
           +V+ F  CLCC SH  G V    + +EW + K +W ++
Sbjct: 3   IVDLFLICLCCLSH--GGV--QANSVEWLDMKHVWGAT 36



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>AF403128:Os04g0632500 |
          Length = 820

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
 Frame = +1

Query: 691 GTQTVSAIWHGLYPGYMIFFVQSALMINGSKVIYRWQQAVSNSGLRTILSLLNCAYTMMV 870
           G +T   +    YP     F+   L+ +G+K+ Y +   VS+S + T L+ L+   TMM 
Sbjct: 203 GVRTSVTVSGAQYPSNSSLFMYQTLIDSGNKLYYSY--TVSDSSIYTRLT-LDSTGTMMF 259

Query: 871 LNY-SCIGFQVLSFQETLASYKSVY 942
           L++ +     +L FQ   A    VY
Sbjct: 260 LSWDNSSSSWMLIFQRPAAGSCEVY 284


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 35,945,775
Number of extensions: 824853
Number of successful extensions: 1858
Number of sequences better than 10.0: 8
Number of HSP's gapped: 1856
Number of HSP's successfully gapped: 8
Length of query: 418
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 315
Effective length of database: 11,275,632
Effective search space: 3551824080
Effective search space used: 3551824080
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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