ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf36j13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001054258.1| Oryza sativa (japonica cultivar-group) Os02g0676000 (Os02g0676000) mRNA, complete cds Length = 1752 Score = 1013 bits (511), Expect = 0.0 Identities = 909/1041 (87%), Gaps = 3/1041 (0%) Strand = Plus / Plus Query: 4 gatgcaaccggtgctttaatggttttaacgttgaaagtcatttcatgctcaatgaactac 63 |||||||| |||||||||||||||||||| |||||| |||||||||| |||| |||||| Sbjct: 465 gatgcaacaggtgctttaatggttttaacattgaaaatcatttcatgtgcaataaactac 524 Query: 64 agtgatggtctcttgaaggaagaagagggtctacgtgatgctcagaagaagtatcgcttg 123 ||||| ||| | ||||||||||| |||| | |||||||| ||||| |||||||| ||| Sbjct: 525 agtgacggtatgttgaaggaaga---gggtttgcgtgatgcccagaaaaagtatcgtttg 581 Query: 124 actacgatgccttctctagtcgaatatttcggttactgcctctgctgtggcagccacttt 183 ||| | |||||| | |||||||||| || ||||||||||||||||||||||| ||| Sbjct: 582 gctaaacttccttctttgatcgaatattttggctactgcctctgctgtggcagccatttt 641 Query: 184 gctggaccagtatatgagatgaaagattatcttgaatggactgaaaggaaaggaatatgg 243 ||||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 642 gctgggccagtatatgagatgaaagattatcttgaatatactgaacggaaaggattatgg 701 Query: 244 gccagctcaactccttcaccattattacctactctgcgcgctctagttcaggctggaata 303 |||||| |||||||||||||| |||| |||||| |||| ||||||||||| ||||| | Sbjct: 702 gccagcccaactccttcaccactattgcctactttgcgtgctctagttcaagctggcgca 761 Query: 304 tgcatggggttatatttgtatctgtcacctatgtttccgctttcacgatttagtgaacct 363 || |||||||||||||||||||| |||||| ||||| |||||||| ||||| || || Sbjct: 762 tgtatggggttatatttgtatctatcacctcaatttccactttcacggtttagcgagccc 821 Query: 364 ctatattatgagtggggtttctggcaccggctcttctttcagtacatgtcaggatttact 423 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 822 ttatattatgagtggggtttctggcaccggctcttctatcagtacatgtcaggctttact 881 Query: 424 gctcgttggaaatactactttatatggtcagtttcagaagctgcaattattatatctggc 483 |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 882 gctcgttggaaatactactttatatggtcactttcagaagctgcaatcattatatctggt 941 Query: 484 ctgggtttcaccggttggtctgattcttctcccccaaaagccaaatgggaccgtgctata 543 |||||||| | ||| ||||||||||| |||||||| |||||||||||||| ||||| | | Sbjct: 942 ctgggttttagcggctggtctgattcatctcccccgaaagccaaatgggatcgtgcaaaa 1001 Query: 544 aatgttgatattctgggcgtcgaactagctggaagtgcagctcaattgccacttaagtgg 603 ||||||||| || | || |||||| ||||| |||||||| ||| ||||| |||| |||| Sbjct: 1002 aatgttgatgttttaggtgtcgaattagctacaagtgcagttcagttgccgcttatgtgg 1061 Query: 604 aatattcaagtgagcacatggctaagatactatgtatatgagaggctaattcagaaaggg 663 || |||||||||||||||||||| |||||||||| ||||||||| || |||||||||| Sbjct: 1062 aacattcaagtgagcacatggctgcgatactatgtttatgagaggttagttcagaaagga 1121 Query: 664 aagaagcctggtttccttcagttgttgggtacacagacagtcagtgctatctggcatgga 723 ||||| ||||||||||| |||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1122 aagaaacctggtttcctccagttgctgggtacacagacagtcagtgctgtctggcatggt 1181 Query: 724 ctgtacccaggatatatgatattctttgttcagtcggcattgatgataaatggttcaaaa 783 || || || |||||||| |||||||||||||| || |||||||||||||||||||||||| Sbjct: 1182 ctttatcccggatatatcatattctttgttcaatcagcattgatgataaatggttcaaaa 1241 Query: 784 gttatatacagatggcaacaagctgtgagcaattcaggcctccgcactatcctgtcttta 843 || |||||||||||||||||||| || |||||| ||| | ||| | |||||||| ||| Sbjct: 1242 gtcatatacagatggcaacaagcagtcagcaatccagtcttccacgctatcctggttttt 1301 Query: 844 ctaaattgtgcatacaccatgatggtgcttaactactcatgcattggcttccaggtactg 903 |||||| | |||||||| ||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 1302 gtaaatttttcatacaccttgatggtccttaactactcatgtattgggttccaggtactg 1361 Query: 904 agcttccaggagaccttggcatcctacaagagcgtatattatgttggcacaattgttcct 963 |||||| |||| ||| | ||||||||| |||||||||||||| | |||||||||||||| Sbjct: 1362 agcttcaaggaaaccctagcatcctaccagagcgtatattatatcggcacaattgttccc 1421 Query: 964 attctatgtgtcttgctaggctatgttatcaagcccgcgagacctgtgaagccaaaggct 1023 ||| || ||||||||| || |||||||||||||| || || || ||||||||||||||| Sbjct: 1422 attgtagttgtcttgctgggttatgttatcaagccagccaggccagtgaagccaaaggct 1481 Query: 1024 cgcaaggcagaatgaggaaca 1044 || ||||||||||||| |||| Sbjct: 1482 cggaaggcagaatgagcaaca 1502
>dbj|AK073916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071M20, full insert sequence Length = 1753 Score = 997 bits (503), Expect = 0.0 Identities = 907/1041 (87%), Gaps = 3/1041 (0%) Strand = Plus / Plus Query: 4 gatgcaaccggtgctttaatggttttaacgttgaaagtcatttcatgctcaatgaactac 63 |||||| | |||||||||||||||||||| |||||| |||||||||| |||| |||||| Sbjct: 466 gatgcagcaggtgctttaatggttttaacattgaaaatcatttcatgtgcaataaactac 525 Query: 64 agtgatggtctcttgaaggaagaagagggtctacgtgatgctcagaagaagtatcgcttg 123 ||||| ||| | ||||||||||| |||| | |||||||| ||||| |||||||| ||| Sbjct: 526 agtgacggtatgttgaaggaaga---gggtttgcgtgatgcccagaaaaagtatcgtttg 582 Query: 124 actacgatgccttctctagtcgaatatttcggttactgcctctgctgtggcagccacttt 183 ||| | |||||| | |||||||||| || |||||||||||||| |||||||| ||| Sbjct: 583 gctaaacttccttctttgatcgaatattttggctactgcctctgctgcggcagccatttt 642 Query: 184 gctggaccagtatatgagatgaaagattatcttgaatggactgaaaggaaaggaatatgg 243 ||||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 643 gctgggccagtatatgagatgaaagattatcttgaatatactgaacggaaaggattatgg 702 Query: 244 gccagctcaactccttcaccattattacctactctgcgcgctctagttcaggctggaata 303 |||||| |||||||||||||| |||| |||||| |||| ||||||||||| ||||| | Sbjct: 703 gccagcccaactccttcaccactattgcctactttgcgtgctctagttcaagctggcgca 762 Query: 304 tgcatggggttatatttgtatctgtcacctatgtttccgctttcacgatttagtgaacct 363 || |||||||||||||||||||| |||||| ||||| |||||||| ||||| || || Sbjct: 763 tgtatggggttatatttgtatctatcacctcaatttccactttcacggtttagcgagccc 822 Query: 364 ctatattatgagtggggtttctggcaccggctcttctttcagtacatgtcaggatttact 423 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 823 ttatattatgagtggggtttctggcaccggctcttctatcagtacatgtcaggctttact 882 Query: 424 gctcgttggaaatactactttatatggtcagtttcagaagctgcaattattatatctggc 483 |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 883 gctcgttggaaatactactttatatggtcactttcagaagctgcaatcattatatctggt 942 Query: 484 ctgggtttcaccggttggtctgattcttctcccccaaaagccaaatgggaccgtgctata 543 |||||||| | ||| ||||||||||| |||||||| |||||||||||||| ||||| | | Sbjct: 943 ctgggttttagcggctggtctgattcatctcccccgaaagccaaatgggatcgtgcaaaa 1002 Query: 544 aatgttgatattctgggcgtcgaactagctggaagtgcagctcaattgccacttaagtgg 603 ||||||||| || | || |||||| ||||| |||||||| ||| ||||| |||| |||| Sbjct: 1003 aatgttgatgttttaggtgtcgaattagctacaagtgcagttcagttgccgcttatgtgg 1062 Query: 604 aatattcaagtgagcacatggctaagatactatgtatatgagaggctaattcagaaaggg 663 || |||||||||||||||||||| |||||||||| ||||||||| || |||||||||| Sbjct: 1063 aacattcaagtgagcacatggctgcgatactatgtttatgagaggttagttcagaaagga 1122 Query: 664 aagaagcctggtttccttcagttgttgggtacacagacagtcagtgctatctggcatgga 723 ||||| ||||||||||| |||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1123 aagaaacctggtttcctccagttgctgggtacacagacagtcagtgctgtctggcatggt 1182 Query: 724 ctgtacccaggatatatgatattctttgttcagtcggcattgatgataaatggttcaaaa 783 || || || |||||||| |||||||||||||| || |||||||||||||||||||||||| Sbjct: 1183 ctttatcccggatatatcatattctttgttcaatcagcattgatgataaatggttcaaaa 1242 Query: 784 gttatatacagatggcaacaagctgtgagcaattcaggcctccgcactatcctgtcttta 843 || |||||||||||||||||||| || |||||| ||| | ||| | |||||||| ||| Sbjct: 1243 gtcatatacagatggcaacaagcagtcagcaatccagtcttccacgctatcctggttttt 1302 Query: 844 ctaaattgtgcatacaccatgatggtgcttaactactcatgcattggcttccaggtactg 903 |||||| | |||||||| ||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 1303 gtaaatttttcatacaccttgatggtccttaactactcatgtattgggttccaggtactg 1362 Query: 904 agcttccaggagaccttggcatcctacaagagcgtatattatgttggcacaattgttcct 963 |||||| |||| ||| | ||||||||| |||||||||||||| | |||||||||||||| Sbjct: 1363 agcttcaaggaaaccctagcatcctaccagagcgtatattatatcggcacaattgttccc 1422 Query: 964 attctatgtgtcttgctaggctatgttatcaagcccgcgagacctgtgaagccaaaggct 1023 ||| || ||||||||| || |||||||||||||| || || || ||||||||||||||| Sbjct: 1423 attgtagttgtcttgctgggttatgttatcaagccagccaggccagtgaagccaaaggct 1482 Query: 1024 cgcaaggcagaatgaggaaca 1044 || ||||||||||||| |||| Sbjct: 1483 cggaaggcagaatgagcaaca 1503
>emb|AJ000229.1|HVJ000229 Hordeum vulgare mRNA for expressed sequence tag Length = 490 Score = 876 bits (442), Expect = 0.0 Identities = 472/478 (98%), Gaps = 3/478 (0%) Strand = Plus / Plus Query: 460 gaagctgcaattattatatctggcctgggtttcaccggttggtctgattcttctccccca 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaagctgcaattattatatctggcctgggtttcaccggttggtctgattcttctccccca 60 Query: 520 aaagccaaatgggaccgtgctataaatgttgatattctgggcgtcgaactagctggaagt 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aaagccaaatgggaccgtgctataaatgttgatattctgggcgtcgaactagctggaagt 120 Query: 580 gcagctcaattgccacttaagtggaatattcaagtgagcacatggctaagatactatgta 639 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcagctcaattgccacttaagtggaatattcaagtgagcacatggctaagatactatgta 180 Query: 640 tatgagaggctaattcagaaagggaagaagcctggtttccttcagttgttgggtacacag 699 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tatgagaggctaattcagaaagggaagaagcctggtttccttcagttgttgggtacacag 240 Query: 700 acagtcagtgctatctggcatggactgtacccaggatatatgatattctttgttcagtcg 759 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 acagtcagtgctatctggcatggactgtacccaggatatatgatattctttgttcagtcg 300 Query: 760 gcattgatgataaatggttcaaaagttatatacagatggcaacaagctgtg-agcaattc 818 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 301 gcattgatgataaatggttcaaaagttatatacagatggcaacaagctgtgaagcaattc 360 Query: 819 aggcctccgcactatcctgtctttactaaattg-tgcatacaccatgatgg-tgcttaac 876 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 361 aggcctccgcactatcctgtctttactaaattgttgcatacaccatgatggttgcttaac 420 Query: 877 tactcatgcattggcttccaggtactgagcttccaggagaccttggcatcctacaaga 934 |||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||| Sbjct: 421 tactcatgcattggcttccaggtactgaacttccaggaaaacttggcatcctacaaga 478
>gb|AY108289.1| Zea mays PCO091564 mRNA sequence Length = 871 Score = 807 bits (407), Expect = 0.0 Identities = 689/783 (87%) Strand = Plus / Plus Query: 180 ctttgctggaccagtatatgagatgaaagattatcttgaatggactgaaaggaaaggaat 239 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8 ctttgctggaccggtatatgagatgaaagattatcttgaatggactgaaaggaaaggaat 67 Query: 240 atgggccagctcaactccttcaccattattacctactctgcgcgctctagttcaggctgg 299 |||||| ||| |||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 68 atgggctagcccaactccttcgccattgttacctactttgcgtgctctagttcaggctgg 127 Query: 300 aatatgcatggggttatatttgtatctgtcacctatgtttccgctttcacgatttagtga 359 |||||||||||||||||||| || |||||||||| ||||| || ||||| |||||||| Sbjct: 128 tatatgcatggggttatatttatacctgtcacctaaatttccactctcacggtttagtga 187 Query: 360 acctctatattatgagtggggtttctggcaccggctcttctttcagtacatgtcaggatt 419 || ||||||||||| |||||||| |||||||| ||||||| ||||||||||||||| || Sbjct: 188 gcccctatattatgaatggggtttttggcaccgactcttctatcagtacatgtcaggctt 247 Query: 420 tactgctcgttggaaatactactttatatggtcagtttcagaagctgcaattattatatc 479 ||| |||||||||||||| ||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 248 taccgctcgttggaaatattactttatatggtcaatttcagaagcctcaattatcatatc 307 Query: 480 tggcctgggtttcaccggttggtctgattcttctcccccaaaagccaaatgggaccgtgc 539 ||| || || || || |||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 308 tggtctaggctttactggttggtcggaatcttctcccccaaaagccaaatgggatcgtgc 367 Query: 540 tataaatgttgatattctgggcgtcgaactagctggaagtgcagctcaattgccacttaa 599 | |||||||||| | | || || ||| ||||||||||| ||| ||||||||| ||| Sbjct: 368 aaaaaatgttgatgtattaggtgttgaattagctggaagttcagttcaattgccccttgt 427 Query: 600 gtggaatattcaagtgagcacatggctaagatactatgtatatgagaggctaattcagaa 659 |||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| Sbjct: 428 gtggaatattcaagtgagcacatggctacgatactatgtctatgagaggttaattcagaa 487 Query: 660 agggaagaagcctggtttccttcagttgttgggtacacagacagtcagtgctatctggca 719 ||| ||||| || ||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 488 aggaaagaaaccaggtttccttcaattgttgggtacacagacagtcagtgccatctggca 547 Query: 720 tggactgtacccaggatatatgatattctttgttcagtcggcattgatgataaatggttc 779 |||||| || || |||||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 548 tggactatatcctggatatatcatattctttgttcaatcagcattgatgataaatggttc 607 Query: 780 aaaagttatatacagatggcaacaagctgtgagcaattcaggcctccgcactatcctgtc 839 | |||||||||||||||||| ||||| | ||||| |||| ||| || ||||||| | Sbjct: 608 acgagttatatacagatggcagcaagcagcgagcagttcattcctgagcggtatcctggc 667 Query: 840 tttactaaattgtgcatacaccatgatggtgcttaactactcatgcattggcttccaggt 899 || ||||||| ||| || || || |||||||||||||||| ||||| || |||||||| Sbjct: 668 ctttctaaattttgcttatacattgctggtgcttaactactcctgcatcgggttccaggt 727 Query: 900 actgagcttccaggagaccttggcatcctacaagagcgtatattatgttggcacaattgt 959 |||||||||| | || |||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 728 actgagcttcaaagaaaccttggcgtcctaccggagcgtatattatgttggcacaattgt 787 Query: 960 tcc 962 ||| Sbjct: 788 tcc 790
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 412 bits (208), Expect = e-111 Identities = 343/388 (88%) Strand = Plus / Plus Query: 239 tatgggccagctcaactccttcaccattattacctactctgcgcgctctagttcaggctg 298 ||||||||||| |||||||||||||| |||| |||||| |||| ||||||||||| |||| Sbjct: 27582692 tatgggccagcccaactccttcaccactattgcctactttgcgtgctctagttcaagctg 27582751 Query: 299 gaatatgcatggggttatatttgtatctgtcacctatgtttccgctttcacgatttagtg 358 | ||| |||||||||||||||||||| |||||| ||||| |||||||| ||||| | Sbjct: 27582752 gcgcatgtatggggttatatttgtatctatcacctcaatttccactttcacggtttagcg 27582811 Query: 359 aacctctatattatgagtggggtttctggcaccggctcttctttcagtacatgtcaggat 418 | || |||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 27582812 agcccttatattatgagtggggtttctggcaccggctcttctatcagtacatgtcaggct 27582871 Query: 419 ttactgctcgttggaaatactactttatatggtcagtttcagaagctgcaattattatat 478 ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 27582872 ttactgctcgttggaaatactactttatatggtcactttcagaagctgcaatcattatat 27582931 Query: 479 ctggcctgggtttcaccggttggtctgattcttctcccccaaaagccaaatgggaccgtg 538 |||| |||||||| | ||| ||||||||||| |||||||| |||||||||||||| |||| Sbjct: 27582932 ctggtctgggttttagcggctggtctgattcatctcccccgaaagccaaatgggatcgtg 27582991 Query: 539 ctataaatgttgatattctgggcgtcgaactagctggaagtgcagctcaattgccactta 598 | | |||||||||| || | || |||||| ||||| |||||||| ||| ||||| |||| Sbjct: 27582992 caaaaaatgttgatgttttaggtgtcgaattagctacaagtgcagttcagttgccgctta 27583051 Query: 599 agtggaatattcaagtgagcacatggct 626 |||||| |||||||||||||||||||| Sbjct: 27583052 tgtggaacattcaagtgagcacatggct 27583079 Score = 196 bits (99), Expect = 1e-46 Identities = 194/225 (86%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 13 ggtgctttaatggttttaacgttgaaagtcatttcatgctcaatgaactacagtgatggt 72 |||||||||||||||||||| |||||| |||||||||| |||| ||||||||||| ||| Sbjct: 27582394 ggtgctttaatggttttaacattgaaaatcatttcatgtgcaataaactacagtgacggt 27582453 Query: 73 ctcttgaaggaagaagagggtctacgtgatgctcagaagaagtatcgcttgactacgatg 132 | ||||||||||| |||| | |||||||| ||||| |||||||| ||| ||| | Sbjct: 27582454 atgttgaaggaaga---gggtttgcgtgatgcccagaaaaagtatcgtttggctaaactt 27582510 Query: 133 ccttctctagtcgaatatttcggttactgcctctgctgtggcagccactttgctggacca 192 |||||| | |||||||||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 27582511 ccttctttgatcgaatattttggctactgcctctgctgtggcagccattttgctgggcca 27582570 Query: 193 gtatatgagatgaaagattatcttgaatggactgaaaggaaagga 237 |||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 27582571 gtatatgagatgaaagattatcttgaatatactgaacggaaagga 27582615 Score = 151 bits (76), Expect = 7e-33 Identities = 133/152 (87%) Strand = Plus / Plus Query: 893 tccaggtactgagcttccaggagaccttggcatcctacaagagcgtatattatgttggca 952 ||||||||||||||||| |||| ||| | ||||||||| |||||||||||||| | |||| Sbjct: 27585032 tccaggtactgagcttcaaggaaaccctagcatcctaccagagcgtatattatatcggca 27585091 Query: 953 caattgttcctattctatgtgtcttgctaggctatgttatcaagcccgcgagacctgtga 1012 |||||||||| ||| || ||||||||| || |||||||||||||| || || || |||| Sbjct: 27585092 caattgttcccattgtagttgtcttgctgggttatgttatcaagccagccaggccagtga 27585151 Query: 1013 agccaaaggctcgcaaggcagaatgaggaaca 1044 ||||||||||||| ||||||||||||| |||| Sbjct: 27585152 agccaaaggctcggaaggcagaatgagcaaca 27585183 Score = 109 bits (55), Expect = 2e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 635 atgtatatgagaggctaattcagaaagggaagaagcctggtttccttcagttgttgggta 694 |||| ||||||||| || |||||||||| ||||| ||||||||||| |||||| |||||| Sbjct: 27583645 atgtttatgagaggttagttcagaaaggaaagaaacctggtttcctccagttgctgggta 27583704 Query: 695 cacagacagtcagtgctatctggcatg 721 ||||||||||||||||| ||||||||| Sbjct: 27583705 cacagacagtcagtgctgtctggcatg 27583731 Score = 89.7 bits (45), Expect = 2e-14 Identities = 96/113 (84%) Strand = Plus / Plus Query: 787 atatacagatggcaacaagctgtgagcaattcaggcctccgcactatcctgtctttacta 846 |||||||||||||||||||| || |||||| ||| | ||| | |||||||| ||| || Sbjct: 27584397 atatacagatggcaacaagcagtcagcaatccagtcttccacgctatcctggtttttgta 27584456 Query: 847 aattgtgcatacaccatgatggtgcttaactactcatgcattggcttccaggt 899 |||| | |||||||| ||||||| |||||||||||||| ||||| |||||||| Sbjct: 27584457 aatttttcatacaccttgatggtccttaactactcatgtattgggttccaggt 27584509 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 733 ggatatatgatattctttgttcagtcggcattgatgataaatggttcaaaag 784 |||||||| |||||||||||||| || ||||||||||||||||||||||||| Sbjct: 27584241 ggatatatcatattctttgttcaatcagcattgatgataaatggttcaaaag 27584292
>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0135D07 Length = 170587 Score = 412 bits (208), Expect = e-111 Identities = 343/388 (88%) Strand = Plus / Plus Query: 239 tatgggccagctcaactccttcaccattattacctactctgcgcgctctagttcaggctg 298 ||||||||||| |||||||||||||| |||| |||||| |||| ||||||||||| |||| Sbjct: 62361 tatgggccagcccaactccttcaccactattgcctactttgcgtgctctagttcaagctg 62420 Query: 299 gaatatgcatggggttatatttgtatctgtcacctatgtttccgctttcacgatttagtg 358 | ||| |||||||||||||||||||| |||||| ||||| |||||||| ||||| | Sbjct: 62421 gcgcatgtatggggttatatttgtatctatcacctcaatttccactttcacggtttagcg 62480 Query: 359 aacctctatattatgagtggggtttctggcaccggctcttctttcagtacatgtcaggat 418 | || |||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 62481 agcccttatattatgagtggggtttctggcaccggctcttctatcagtacatgtcaggct 62540 Query: 419 ttactgctcgttggaaatactactttatatggtcagtttcagaagctgcaattattatat 478 ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 62541 ttactgctcgttggaaatactactttatatggtcactttcagaagctgcaatcattatat 62600 Query: 479 ctggcctgggtttcaccggttggtctgattcttctcccccaaaagccaaatgggaccgtg 538 |||| |||||||| | ||| ||||||||||| |||||||| |||||||||||||| |||| Sbjct: 62601 ctggtctgggttttagcggctggtctgattcatctcccccgaaagccaaatgggatcgtg 62660 Query: 539 ctataaatgttgatattctgggcgtcgaactagctggaagtgcagctcaattgccactta 598 | | |||||||||| || | || |||||| ||||| |||||||| ||| ||||| |||| Sbjct: 62661 caaaaaatgttgatgttttaggtgtcgaattagctacaagtgcagttcagttgccgctta 62720 Query: 599 agtggaatattcaagtgagcacatggct 626 |||||| |||||||||||||||||||| Sbjct: 62721 tgtggaacattcaagtgagcacatggct 62748 Score = 196 bits (99), Expect = 1e-46 Identities = 194/225 (86%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 13 ggtgctttaatggttttaacgttgaaagtcatttcatgctcaatgaactacagtgatggt 72 |||||||||||||||||||| |||||| |||||||||| |||| ||||||||||| ||| Sbjct: 62063 ggtgctttaatggttttaacattgaaaatcatttcatgtgcaataaactacagtgacggt 62122 Query: 73 ctcttgaaggaagaagagggtctacgtgatgctcagaagaagtatcgcttgactacgatg 132 | ||||||||||| |||| | |||||||| ||||| |||||||| ||| ||| | Sbjct: 62123 atgttgaaggaaga---gggtttgcgtgatgcccagaaaaagtatcgtttggctaaactt 62179 Query: 133 ccttctctagtcgaatatttcggttactgcctctgctgtggcagccactttgctggacca 192 |||||| | |||||||||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 62180 ccttctttgatcgaatattttggctactgcctctgctgtggcagccattttgctgggcca 62239 Query: 193 gtatatgagatgaaagattatcttgaatggactgaaaggaaagga 237 |||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 62240 gtatatgagatgaaagattatcttgaatatactgaacggaaagga 62284 Score = 151 bits (76), Expect = 7e-33 Identities = 133/152 (87%) Strand = Plus / Plus Query: 893 tccaggtactgagcttccaggagaccttggcatcctacaagagcgtatattatgttggca 952 ||||||||||||||||| |||| ||| | ||||||||| |||||||||||||| | |||| Sbjct: 64701 tccaggtactgagcttcaaggaaaccctagcatcctaccagagcgtatattatatcggca 64760 Query: 953 caattgttcctattctatgtgtcttgctaggctatgttatcaagcccgcgagacctgtga 1012 |||||||||| ||| || ||||||||| || |||||||||||||| || || || |||| Sbjct: 64761 caattgttcccattgtagttgtcttgctgggttatgttatcaagccagccaggccagtga 64820 Query: 1013 agccaaaggctcgcaaggcagaatgaggaaca 1044 ||||||||||||| ||||||||||||| |||| Sbjct: 64821 agccaaaggctcggaaggcagaatgagcaaca 64852 Score = 109 bits (55), Expect = 2e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 635 atgtatatgagaggctaattcagaaagggaagaagcctggtttccttcagttgttgggta 694 |||| ||||||||| || |||||||||| ||||| ||||||||||| |||||| |||||| Sbjct: 63314 atgtttatgagaggttagttcagaaaggaaagaaacctggtttcctccagttgctgggta 63373 Query: 695 cacagacagtcagtgctatctggcatg 721 ||||||||||||||||| ||||||||| Sbjct: 63374 cacagacagtcagtgctgtctggcatg 63400 Score = 89.7 bits (45), Expect = 2e-14 Identities = 96/113 (84%) Strand = Plus / Plus Query: 787 atatacagatggcaacaagctgtgagcaattcaggcctccgcactatcctgtctttacta 846 |||||||||||||||||||| || |||||| ||| | ||| | |||||||| ||| || Sbjct: 64066 atatacagatggcaacaagcagtcagcaatccagtcttccacgctatcctggtttttgta 64125 Query: 847 aattgtgcatacaccatgatggtgcttaactactcatgcattggcttccaggt 899 |||| | |||||||| ||||||| |||||||||||||| ||||| |||||||| Sbjct: 64126 aatttttcatacaccttgatggtccttaactactcatgtattgggttccaggt 64178 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 733 ggatatatgatattctttgttcagtcggcattgatgataaatggttcaaaag 784 |||||||| |||||||||||||| || ||||||||||||||||||||||||| Sbjct: 63910 ggatatatcatattctttgttcaatcagcattgatgataaatggttcaaaag 63961
>dbj|AK059030.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-C02, full insert sequence Length = 753 Score = 391 bits (197), Expect = e-105 Identities = 350/401 (87%) Strand = Plus / Plus Query: 644 agaggctaattcagaaagggaagaagcctggtttccttcagttgttgggtacacagacag 703 ||||| || |||||||||| ||||| ||||||||||| |||||| ||||||||||||||| Sbjct: 2 agaggttagttcagaaaggaaagaaacctggtttcctccagttgctgggtacacagacag 61 Query: 704 tcagtgctatctggcatggactgtacccaggatatatgatattctttgttcagtcggcat 763 |||||||| |||||||||| || || || |||||||| |||||||||||||| || |||| Sbjct: 62 tcagtgctgtctggcatggtctttatcccggatatatcatattctttgttcaatcagcat 121 Query: 764 tgatgataaatggttcaaaagttatatacagatggcaacaagctgtgagcaattcaggcc 823 |||||||||||||||||||||| |||||||||||||||||||| || |||||| ||| | Sbjct: 122 tgatgataaatggttcaaaagtcatatacagatggcaacaagcagtcagcaatccagtct 181 Query: 824 tccgcactatcctgtctttactaaattgtgcatacaccatgatggtgcttaactactcat 883 ||| | |||||||| ||| |||||| | |||||||| ||||||| ||||||||||||| Sbjct: 182 tccacgctatcctggtttttgtaaatttttcatacaccttgatggtccttaactactcat 241 Query: 884 gcattggcttccaggtactgagcttccaggagaccttggcatcctacaagagcgtatatt 943 | ||||| |||||||||||||||||| |||| ||| | ||||||||| |||||||||||| Sbjct: 242 gtattgggttccaggtactgagcttcaaggaaaccctagcatcctaccagagcgtatatt 301 Query: 944 atgttggcacaattgttcctattctatgtgtcttgctaggctatgttatcaagcccgcga 1003 || | |||||||||||||| ||| || ||||||||| || |||||||||||||| || | Sbjct: 302 atatcggcacaattgttcccattgtagttgtcttgctgggttatgttatcaagccagcca 361 Query: 1004 gacctgtgaagccaaaggctcgcaaggcagaatgaggaaca 1044 | || ||||||||||||||||| ||||||||||||| |||| Sbjct: 362 ggccagtgaagccaaaggctcggaaggcagaatgagcaaca 402
>gb|AC169372.2| Sorghum bicolor clone SB_BBc0156J18, complete sequence Length = 108555 Score = 367 bits (185), Expect = 6e-98 Identities = 344/397 (86%) Strand = Plus / Minus Query: 238 atatgggccagctcaactccttcaccattattacctactctgcgcgctctagttcaggct 297 |||||||| ||| |||||||||| ||||| ||||||||| |||| ||||||||||||||| Sbjct: 72806 atatgggctagcccaactccttcgccattgttacctactttgcgtgctctagttcaggct 72747 Query: 298 ggaatatgcatggggttatatttgtatctgtcacctatgtttccgctttcacgatttagt 357 || ||||||||||||||||||| || |||||||||| ||||| || ||||| |||||| Sbjct: 72746 ggtgtatgcatggggttatatttatacctgtcacctaaatttccactctcacggtttagt 72687 Query: 358 gaacctctatattatgagtggggtttctggcaccggctcttctttcagtacatgtcagga 417 || || |||||||||| ||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 72686 gagcccttatattatgaatggggtttctggcaccgactcttctatcagtacatgtcaggc 72627 Query: 418 tttactgctcgttggaaatactactttatatggtcagtttcagaagctgcaattattata 477 || ||||||||||||||||| ||||||||||||||| |||||||||| ||||||| ||| Sbjct: 72626 ttcactgctcgttggaaatattactttatatggtcaatttcagaagcctcaattatcata 72567 Query: 478 tctggcctgggtttcaccggttggtctgattcttctcccccaaaagccaaatgggaccgt 537 ||||| ||||| || || |||||||| || ||||||||||| |||||||||||||| ||| Sbjct: 72566 tctggtctgggctttactggttggtcagaatcttctcccccgaaagccaaatgggatcgt 72507 Query: 538 gctataaatgttgatattctgggcgtcgaactagctggaagtgcagctcaattgccactt 597 || | |||||||||| | | || || ||| ||||||||||||||| |||| | || ||| Sbjct: 72506 gcgaaaaatgttgatgtattaggtgttgaattagctggaagtgcagttcaaattcccctt 72447 Query: 598 aagtggaatattcaagtgagcacatggctaagatact 634 ||||||||||||||||||||||||| || |||||| Sbjct: 72446 gtgtggaatattcaagtgagcacatggttacgatact 72410 Score = 214 bits (108), Expect = 6e-52 Identities = 194/222 (87%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 16 gctttaatggttttaacgttgaaagtcatttcatgctcaatgaactacagtgatggtctc 75 |||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| || Sbjct: 73100 gctttaatggttttaacgctgaaagtcatttcatgcgcaataaactacagtgatggtatc 73041 Query: 76 ttgaaggaagaagagggtctacgtgatgctcagaagaagtatcgcttgactacgatgcct 135 ||||||||||| |||| |||| ||||||||||| || || || |||||| | | ||| Sbjct: 73040 ttgaaggaaga---gggtttacgcgatgctcagaaaaaataccgactgactaagcttcct 72984 Query: 136 tctctagtcgaatatttcggttactgcctctgctgtggcagccactttgctggaccagta 195 |||||| | |||||||| || ||||| ||||| ||||| ||||| ||||||||||| ||| Sbjct: 72983 tctctaattgaatattttgggtactgtctctgttgtgggagccattttgctggaccggta 72924 Query: 196 tatgagatgaaagattatcttgaatggactgaaaggaaagga 237 ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 72923 tatgagatgaaagattatcttgattggactgagaggaaagga 72882 Score = 125 bits (63), Expect = 4e-25 Identities = 81/87 (93%) Strand = Plus / Minus Query: 635 atgtatatgagaggctaattcagaaagggaagaagcctggtttccttcagttgttgggta 694 |||| ||||||||||||||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 71985 atgtctatgagaggctaattcagaaaggaaagaaaccaggtttccttcagttgttgggta 71926 Query: 695 cacagacagtcagtgctatctggcatg 721 ||||||||||||| || |||||||||| Sbjct: 71925 cacagacagtcagcgccatctggcatg 71899 Score = 101 bits (51), Expect = 6e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 896 aggtactgagcttccaggagaccttggcatcctacaagagcgtatattatgttggcacaa 955 |||||||||||||| | || |||||||| |||||| |||||||||||||||||||||||| Sbjct: 69953 aggtactgagcttcaaagaaaccttggcgtcctaccagagcgtatattatgttggcacaa 69894 Query: 956 ttgttcctattctatgtgtcttgctaggctatgttatcaagcc 998 ||||||| ||| | | | || |||| ||| ||||||||||||| Sbjct: 69893 ttgttcccattgtgtttctcctgctgggcaatgttatcaagcc 69851 Score = 87.7 bits (44), Expect = 9e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 721 ggactgtacccaggatatatgatattctttgttcagtcggcattgatgataaatggttca 780 |||||||| || |||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 71071 ggactgtatcctggatatatcatattctttgttcagtcagcattgatgataaatggttca 71012 Score = 81.8 bits (41), Expect = 6e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 783 agttatatacagatggcaacaagctgtgagcaattcaggcctccgcactatcctgtcttt 842 |||||||||||||||||| ||||| ||||||| |||| ||||||| ||||||| |||| Sbjct: 70471 agttatatacagatggcagcaagcagtgagcagttcattcctccgcggtatcctggcttt 70412 Query: 843 actaaattgtgcatacaccatgatggtgcttaactactcatgcat 887 ||||||| ||| || || || |||||||||||||||| ||||| Sbjct: 70411 tctaaattttgcttatacattgctggtgcttaactactcctgcat 70367
>ref|NM_101134.3| Arabidopsis thaliana acyltransferase (AT1G12640) mRNA, complete cds Length = 1780 Score = 103 bits (52), Expect = 2e-18 Identities = 177/218 (81%), Gaps = 3/218 (1%) Strand = Plus / Plus Query: 19 ttaatggttttaacgttgaaagtcatttcatgctcaatgaactacagtgatggtctcttg 78 |||||||| || ||| |||||||||| ||||| |||||||| |||| |||||| | ||| Sbjct: 480 ttaatggtgttgacgctgaaagtcatctcatgttcaatgaattacaatgatgggatgttg 539 Query: 79 aaggaagaagagggtctacgtgatgctcagaagaagtatcgcttgactacgatgccttct 138 ||||| |||| |||||||||| ||||||||||| | | |||| | |||||| ||| Sbjct: 540 aaggaggaag---gtctacgtgaagctcagaagaaaaacagattgattcagatgccgtct 596 Query: 139 ctagtcgaatatttcggttactgcctctgctgtggcagccactttgctggaccagtatat 198 | | || || || ||||||||||| || ||||| ||||| |||||||| || || ||| Sbjct: 597 ttgattgagtactttggttactgcctttgttgtggtagccattttgctggtcctgtttat 656 Query: 199 gagatgaaagattatcttgaatggactgaaaggaaagg 236 || ||||||||||||||||||||||| ||| ||||||| Sbjct: 657 gaaatgaaagattatcttgaatggaccgaagggaaagg 694 Score = 89.7 bits (45), Expect = 2e-14 Identities = 285/365 (78%) Strand = Plus / Plus Query: 406 tacatgtcaggatttactgctcgttggaaatactactttatatggtcagtttcagaagct 465 |||||| | ||||| || ||||||||||| || ||||| || |||||| ||||||| ||| Sbjct: 876 tacatggctggattcacggctcgttggaagtattacttcatctggtcaatttcagaggct 935 Query: 466 gcaattattatatctggcctgggtttcaccggttggtctgattcttctcccccaaaagcc 525 | ||||| || ||||| ||||||||| |||||| ||||| | || | ||||| || Sbjct: 936 tctattatcatctctggtttgggtttcagtggttggactgatgatgcttcaccaaagccc 995 Query: 526 aaatgggaccgtgctataaatgttgatattctgggcgtcgaactagctggaagtgcagct 585 |||||||||||||| | || || |||||||| || || ||||||||| || || | | Sbjct: 996 aaatgggaccgtgccaagaacgtagatattctcggtgttgaactagctaagagcgcggtt 1055 Query: 586 caattgccacttaagtggaatattcaagtgagcacatggctaagatactatgtatatgag 645 || | |||||| |||||| || ||||| ||||| ||||| | ||||||| |||||| Sbjct: 1056 cagattccacttgtgtggaacatacaagtcagcacgtggctccgtcactatgtgtatgag 1115 Query: 646 aggctaattcagaaagggaagaagcctggtttccttcagttgttgggtacacagacagtc 705 || || | ||||| || ||||| | |||||| | ||||| | | |||||| || ||| Sbjct: 1116 agacttgtgcagaacggaaagaaagcgggtttcttccagttactagctacacaaaccgtc 1175 Query: 706 agtgctatctggcatggactgtacccaggatatatgatattctttgttcagtcggcattg 765 || || | |||||||||||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 1176 agcgcggtttggcatggactgtatcctggatatatgatgttctttgttcagtcagctttg 1235 Query: 766 atgat 770 ||||| Sbjct: 1236 atgat 1240
>gb|AC025417.4|AC025417 Genomic sequence for Arabidopsis thaliana BAC T12C24 from chromosome I, complete sequence Length = 106142 Score = 103 bits (52), Expect = 2e-18 Identities = 177/218 (81%), Gaps = 3/218 (1%) Strand = Plus / Minus Query: 19 ttaatggttttaacgttgaaagtcatttcatgctcaatgaactacagtgatggtctcttg 78 |||||||| || ||| |||||||||| ||||| |||||||| |||| |||||| | ||| Sbjct: 55427 ttaatggtgttgacgctgaaagtcatctcatgttcaatgaattacaatgatgggatgttg 55368 Query: 79 aaggaagaagagggtctacgtgatgctcagaagaagtatcgcttgactacgatgccttct 138 ||||| |||| |||||||||| ||||||||||| | | |||| | |||||| ||| Sbjct: 55367 aaggaggaag---gtctacgtgaagctcagaagaaaaacagattgattcagatgccgtct 55311 Query: 139 ctagtcgaatatttcggttactgcctctgctgtggcagccactttgctggaccagtatat 198 | | || || || ||||||||||| || ||||| ||||| |||||||| || || ||| Sbjct: 55310 ttgattgagtactttggttactgcctttgttgtggtagccattttgctggtcctgtttat 55251 Query: 199 gagatgaaagattatcttgaatggactgaaaggaaagg 236 || ||||||||||||||||||||||| ||| ||||||| Sbjct: 55250 gaaatgaaagattatcttgaatggaccgaagggaaagg 55213 Score = 63.9 bits (32), Expect = 1e-06 Identities = 134/168 (79%) Strand = Plus / Minus Query: 406 tacatgtcaggatttactgctcgttggaaatactactttatatggtcagtttcagaagct 465 |||||| | ||||| || ||||||||||| || ||||| || |||||| ||||||| ||| Sbjct: 54930 tacatggctggattcacggctcgttggaagtattacttcatctggtcaatttcagaggct 54871 Query: 466 gcaattattatatctggcctgggtttcaccggttggtctgattcttctcccccaaaagcc 525 | ||||| || ||||| ||||||||| |||||| ||||| | || | ||||| || Sbjct: 54870 tctattatcatctctggtttgggtttcagtggttggactgatgatgcttcaccaaagccc 54811 Query: 526 aaatgggaccgtgctataaatgttgatattctgggcgtcgaactagct 573 |||||||||||||| | || || |||||||| || || ||||||||| Sbjct: 54810 aaatgggaccgtgccaagaacgtagatattctcggtgttgaactagct 54763 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 721 ggactgtacccaggatatatgatattctttgttcagtcggcattgatgat 770 |||||||| || ||||||||||| |||||||||||||| || |||||||| Sbjct: 54419 ggactgtatcctggatatatgatgttctttgttcagtcagctttgatgat 54370
>ref|NM_104983.3| Arabidopsis thaliana acyltransferase (AT1G63050) mRNA, complete cds Length = 1659 Score = 93.7 bits (47), Expect = 1e-15 Identities = 134/163 (82%) Strand = Plus / Plus Query: 83 aagaagagggtctacgtgatgctcagaagaagtatcgcttgactacgatgccttctctag 142 ||||||| ||||||||||| |||||||||||| | || |||| | |||||||||||| Sbjct: 512 aagaagaaggtctacgtgaggctcagaagaagaaccgtttgattcagatgccttctctta 571 Query: 143 tcgaatatttcggttactgcctctgctgtggcagccactttgctggaccagtatatgaga 202 | || || || ||||| |||||||| ||||| ||||| || ||||| || || | || | Sbjct: 572 ttgagtactttggttattgcctctgttgtggaagccatttcgctggcccggttttcgaaa 631 Query: 203 tgaaagattatcttgaatggactgaaaggaaaggaatatgggc 245 ||||||||||||| |||||||||||| ||||||||| ||||| Sbjct: 632 tgaaagattatctcgaatggactgaagagaaaggaatttgggc 674 Score = 87.7 bits (44), Expect = 9e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 703 gtcagtgctatctggcatggactgtacccaggatatatgatattctttgttcagtcggca 762 ||||||||| |||||||||||||||| || ||||| || ||||||||||| || || ||| Sbjct: 1144 gtcagtgctgtctggcatggactgtatcctggatacattatattctttgtgcaatcagca 1203 Query: 763 ttgatgataaatggttcaaaagttatatacagatggcaacaagc 806 |||||||| ||||||| |||| ||| ||| | ||||||||||| Sbjct: 1204 ttgatgatcgatggttcgaaagctatttaccggtggcaacaagc 1247 Score = 56.0 bits (28), Expect = 3e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 424 gctcgttggaaatactactttatatggtcagtttcagaagctgcaattattatatctggc 483 ||||||||||| || |||||||||||||| | ||||| ||| | |||||||| ||||| Sbjct: 865 gctcgttggaagtattactttatatggtctatctcagaggcttctattattatctctggt 924 Query: 484 ctgggtttcaccggttggtctgat 507 ||||||||| |||||| ||||| Sbjct: 925 ttgggtttcagtggttggactgat 948
>gb|AY122979.1| Arabidopsis thaliana unknown protein (At1g63050) mRNA, complete cds Length = 1429 Score = 93.7 bits (47), Expect = 1e-15 Identities = 134/163 (82%) Strand = Plus / Plus Query: 83 aagaagagggtctacgtgatgctcagaagaagtatcgcttgactacgatgccttctctag 142 ||||||| ||||||||||| |||||||||||| | || |||| | |||||||||||| Sbjct: 428 aagaagaaggtctacgtgaggctcagaagaagaaccgtttgattcagatgccttctctta 487 Query: 143 tcgaatatttcggttactgcctctgctgtggcagccactttgctggaccagtatatgaga 202 | || || || ||||| |||||||| ||||| ||||| || ||||| || || | || | Sbjct: 488 ttgagtactttggttattgcctctgttgtggaagccatttcgctggcccggttttcgaaa 547 Query: 203 tgaaagattatcttgaatggactgaaaggaaaggaatatgggc 245 ||||||||||||| |||||||||||| ||||||||| ||||| Sbjct: 548 tgaaagattatctcgaatggactgaagagaaaggaatttgggc 590 Score = 87.7 bits (44), Expect = 9e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 703 gtcagtgctatctggcatggactgtacccaggatatatgatattctttgttcagtcggca 762 ||||||||| |||||||||||||||| || ||||| || ||||||||||| || || ||| Sbjct: 1060 gtcagtgctgtctggcatggactgtatcctggatacattatattctttgtgcaatcagca 1119 Query: 763 ttgatgataaatggttcaaaagttatatacagatggcaacaagc 806 |||||||| ||||||| |||| ||| ||| | ||||||||||| Sbjct: 1120 ttgatgatcgatggttcgaaagctatttaccggtggcaacaagc 1163 Score = 56.0 bits (28), Expect = 3e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 424 gctcgttggaaatactactttatatggtcagtttcagaagctgcaattattatatctggc 483 ||||||||||| || |||||||||||||| | ||||| ||| | |||||||| ||||| Sbjct: 781 gctcgttggaagtattactttatatggtctatctcagaggcttctattattatctctggt 840 Query: 484 ctgggtttcaccggttggtctgat 507 ||||||||| |||||| ||||| Sbjct: 841 ttgggtttcagtggttggactgat 864
>gb|AY072080.1| Arabidopsis thaliana unknown protein (At1g63050) mRNA, complete cds Length = 1674 Score = 93.7 bits (47), Expect = 1e-15 Identities = 134/163 (82%) Strand = Plus / Plus Query: 83 aagaagagggtctacgtgatgctcagaagaagtatcgcttgactacgatgccttctctag 142 ||||||| ||||||||||| |||||||||||| | || |||| | |||||||||||| Sbjct: 512 aagaagaaggtctacgtgaggctcagaagaagaaccgtttgattcagatgccttctctta 571 Query: 143 tcgaatatttcggttactgcctctgctgtggcagccactttgctggaccagtatatgaga 202 | || || || ||||| |||||||| ||||| ||||| || ||||| || || | || | Sbjct: 572 ttgagtactttggttattgcctctgttgtggaagccatttcgctggcccggttttcgaaa 631 Query: 203 tgaaagattatcttgaatggactgaaaggaaaggaatatgggc 245 ||||||||||||| |||||||||||| ||||||||| ||||| Sbjct: 632 tgaaagattatctcgaatggactgaagagaaaggaatttgggc 674 Score = 87.7 bits (44), Expect = 9e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 703 gtcagtgctatctggcatggactgtacccaggatatatgatattctttgttcagtcggca 762 ||||||||| |||||||||||||||| || ||||| || ||||||||||| || || ||| Sbjct: 1144 gtcagtgctgtctggcatggactgtatcctggatacattatattctttgtgcaatcagca 1203 Query: 763 ttgatgataaatggttcaaaagttatatacagatggcaacaagc 806 |||||||| ||||||| |||| ||| ||| | ||||||||||| Sbjct: 1204 ttgatgatcgatggttcgaaagctatttaccggtggcaacaagc 1247 Score = 56.0 bits (28), Expect = 3e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 424 gctcgttggaaatactactttatatggtcagtttcagaagctgcaattattatatctggc 483 ||||||||||| || |||||||||||||| | ||||| ||| | |||||||| ||||| Sbjct: 865 gctcgttggaagtattactttatatggtctatctcagaggcttctattattatctctggt 924 Query: 484 ctgggtttcaccggttggtctgat 507 ||||||||| |||||| ||||| Sbjct: 925 ttgggtttcagtggttggactgat 948
>gb|AY128762.1| Arabidopsis thaliana unknown protein (At1g12640) mRNA, complete cds Length = 1451 Score = 89.7 bits (45), Expect = 2e-14 Identities = 285/365 (78%) Strand = Plus / Plus Query: 406 tacatgtcaggatttactgctcgttggaaatactactttatatggtcagtttcagaagct 465 |||||| | ||||| || ||||||||||| || ||||| || |||||| ||||||| ||| Sbjct: 754 tacatggctggattcacggctcgttggaagtattacttcatctggtcaatttcagaggct 813 Query: 466 gcaattattatatctggcctgggtttcaccggttggtctgattcttctcccccaaaagcc 525 | ||||| || ||||| ||||||||| |||||| ||||| | || | ||||| || Sbjct: 814 tctattatcatctctggtttgggtttcagtggttggactgatgatgcttcaccaaagccc 873 Query: 526 aaatgggaccgtgctataaatgttgatattctgggcgtcgaactagctggaagtgcagct 585 |||||||||||||| | || || |||||||| || || ||||||||| || || | | Sbjct: 874 aaatgggaccgtgccaagaacgtagatattctcggtgttgaactagctaagagcgcggtt 933 Query: 586 caattgccacttaagtggaatattcaagtgagcacatggctaagatactatgtatatgag 645 || | |||||| |||||| || ||||| ||||| ||||| | ||||||| |||||| Sbjct: 934 cagattccacttgtgtggaacatacaagtcagcacgtggctccgtcactatgtgtatgag 993 Query: 646 aggctaattcagaaagggaagaagcctggtttccttcagttgttgggtacacagacagtc 705 || || | ||||| || ||||| | |||||| | ||||| | | |||||| || ||| Sbjct: 994 agacttgtgcagaacggaaagaaagcgggtttcttccagttactagctacacaaaccgtc 1053 Query: 706 agtgctatctggcatggactgtacccaggatatatgatattctttgttcagtcggcattg 765 || || | |||||||||||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 1054 agcgcggtttggcatggactgtatcctggatatatgatgttctttgttcagtcagctttg 1113 Query: 766 atgat 770 ||||| Sbjct: 1114 atgat 1118 Score = 85.7 bits (43), Expect = 4e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 154 ggttactgcctctgctgtggcagccactttgctggaccagtatatgagatgaaagattat 213 ||||||||||| || ||||| ||||| |||||||| || || ||||| |||||||||||| Sbjct: 490 ggttactgcctttgttgtggtagccattttgctggtcctgtttatgaaatgaaagattat 549 Query: 214 cttgaatggactgaaaggaaagg 236 ||||||||||| ||| ||||||| Sbjct: 550 cttgaatggaccgaagggaaagg 572 Score = 65.9 bits (33), Expect = 3e-07 Identities = 80/95 (84%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 19 ttaatggttttaacgttgaaagtcatttcatgctcaatgaactacagtgatggtctcttg 78 |||||||| || ||| |||||||||| ||||| |||||||| |||| |||||| | ||| Sbjct: 358 ttaatggtgttgacgctgaaagtcatctcatgttcaatgaattacaatgatgggatgttg 417 Query: 79 aaggaagaagagggtctacgtgatgctcagaagaa 113 ||||| |||| |||||||||| ||||||||||| Sbjct: 418 aaggaggaag---gtctacgtgaagctcagaagaa 449
>gb|AY093087.1| Arabidopsis thaliana unknown protein (At1g12640) mRNA, complete cds Length = 1711 Score = 89.7 bits (45), Expect = 2e-14 Identities = 285/365 (78%) Strand = Plus / Plus Query: 406 tacatgtcaggatttactgctcgttggaaatactactttatatggtcagtttcagaagct 465 |||||| | ||||| || ||||||||||| || ||||| || |||||| ||||||| ||| Sbjct: 876 tacatggctggattcacggctcgttggaagtattacttcatctggtcaatttcagaggct 935 Query: 466 gcaattattatatctggcctgggtttcaccggttggtctgattcttctcccccaaaagcc 525 | ||||| || ||||| ||||||||| |||||| ||||| | || | ||||| || Sbjct: 936 tctattatcatctctggtttgggtttcagtggttggactgatgatgcttcaccaaagccc 995 Query: 526 aaatgggaccgtgctataaatgttgatattctgggcgtcgaactagctggaagtgcagct 585 |||||||||||||| | || || |||||||| || || ||||||||| || || | | Sbjct: 996 aaatgggaccgtgccaagaacgtagatattctcggtgttgaactagctaagagcgcggtt 1055 Query: 586 caattgccacttaagtggaatattcaagtgagcacatggctaagatactatgtatatgag 645 || | |||||| |||||| || ||||| ||||| ||||| | ||||||| |||||| Sbjct: 1056 cagattccacttgtgtggaacatacaagtcagcacgtggctccgtcactatgtgtatgag 1115 Query: 646 aggctaattcagaaagggaagaagcctggtttccttcagttgttgggtacacagacagtc 705 || || | ||||| || ||||| | |||||| | ||||| | | |||||| || ||| Sbjct: 1116 agacttgtgcagaacggaaagaaagcgggtttcttccagttactagctacacaaaccgtc 1175 Query: 706 agtgctatctggcatggactgtacccaggatatatgatattctttgttcagtcggcattg 765 || || | |||||||||||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 1176 agcgcggtttggcatggactgtatcctggatatatgatgttctttgttcagtcagctttg 1235 Query: 766 atgat 770 ||||| Sbjct: 1236 atgat 1240 Score = 85.7 bits (43), Expect = 4e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 154 ggttactgcctctgctgtggcagccactttgctggaccagtatatgagatgaaagattat 213 ||||||||||| || ||||| ||||| |||||||| || || ||||| |||||||||||| Sbjct: 612 ggttactgcctttgttgtggtagccattttgctggtcctgtttatgaaatgaaagattat 671 Query: 214 cttgaatggactgaaaggaaagg 236 ||||||||||| ||| ||||||| Sbjct: 672 cttgaatggaccgaagggaaagg 694 Score = 65.9 bits (33), Expect = 3e-07 Identities = 80/95 (84%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 19 ttaatggttttaacgttgaaagtcatttcatgctcaatgaactacagtgatggtctcttg 78 |||||||| || ||| |||||||||| ||||| |||||||| |||| |||||| | ||| Sbjct: 480 ttaatggtgttgacgctgaaagtcatctcatgttcaatgaattacaatgatgggatgttg 539 Query: 79 aaggaagaagagggtctacgtgatgctcagaagaa 113 ||||| |||| |||||||||| ||||||||||| Sbjct: 540 aaggaggaag---gtctacgtgaagctcagaagaa 571
>gb|AC010795.5|AC010795 Arabidopsis thaliana chromosome 1 BAC F16M19 genomic sequence, complete sequence Length = 100512 Score = 85.7 bits (43), Expect = 4e-13 Identities = 127/155 (81%) Strand = Plus / Minus Query: 83 aagaagagggtctacgtgatgctcagaagaagtatcgcttgactacgatgccttctctag 142 ||||||| ||||||||||| |||||||||||| | || |||| | |||||||||||| Sbjct: 28795 aagaagaaggtctacgtgaggctcagaagaagaaccgtttgattcagatgccttctctta 28736 Query: 143 tcgaatatttcggttactgcctctgctgtggcagccactttgctggaccagtatatgaga 202 | || || || ||||| |||||||| ||||| ||||| || ||||| || || | || | Sbjct: 28735 ttgagtactttggttattgcctctgttgtggaagccatttcgctggcccggttttcgaaa 28676 Query: 203 tgaaagattatcttgaatggactgaaaggaaagga 237 ||||||||||||| |||||||||||| ||||||| Sbjct: 28675 tgaaagattatctcgaatggactgaagagaaagga 28641 Score = 56.0 bits (28), Expect = 3e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 424 gctcgttggaaatactactttatatggtcagtttcagaagctgcaattattatatctggc 483 ||||||||||| || |||||||||||||| | ||||| ||| | |||||||| ||||| Sbjct: 28359 gctcgttggaagtattactttatatggtctatctcagaggcttctattattatctctggt 28300 Query: 484 ctgggtttcaccggttggtctgat 507 ||||||||| |||||| ||||| Sbjct: 28299 ttgggtttcagtggttggactgat 28276 Score = 48.1 bits (24), Expect = 0.077 Identities = 54/64 (84%) Strand = Plus / Minus Query: 721 ggactgtacccaggatatatgatattctttgttcagtcggcattgatgataaatggttca 780 |||||||| || ||||| || ||||||||||| || || ||||||||||| ||||||| Sbjct: 27784 ggactgtatcctggatacattatattctttgtgcaatcagcattgatgatcgatggttcg 27725 Query: 781 aaag 784 |||| Sbjct: 27724 aaag 27721
>emb|BX816576.1|CNS0AD7E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH56ZF03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1560 Score = 85.7 bits (43), Expect = 4e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 154 ggttactgcctctgctgtggcagccactttgctggaccagtatatgagatgaaagattat 213 ||||||||||| || ||||| ||||| |||||||| || || ||||| |||||||||||| Sbjct: 522 ggttactgcctttgttgtggtagccattttgctggtcctgtttatgaaatgaaagattat 581 Query: 214 cttgaatggactgaaaggaaagg 236 ||||||||||| ||| ||||||| Sbjct: 582 cttgaatggaccgaagggaaagg 604 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 715 tggcatggactgtacccaggatatatgatattctttgttcagtcggcattgatgat 770 |||||||||||||| || ||||||||||| |||||||||||||| || |||||||| Sbjct: 1095 tggcatggactgtatcctggatatatgatgttctttgttcagtcagctttgatgat 1150 Score = 56.0 bits (28), Expect = 3e-04 Identities = 78/94 (82%), Gaps = 3/94 (3%) Strand = Plus / Plus Query: 19 ttaatggttttaacgttgaaagtcatttcatgctcaatgaactacagtgatggtctcttg 78 |||||||| || ||| ||||||| || ||||| |||||||| |||| |||||| | ||| Sbjct: 390 ttaatggtgttgacgctgaaagttatctcatgttcaatgaattacaatgatgggatgttg 449 Query: 79 aaggaagaagagggtctacgtgatgctcagaaga 112 ||||| |||| |||||||||| |||||||||| Sbjct: 450 aaggaggaag---gtctacgtgaagctcagaaga 480 Score = 56.0 bits (28), Expect = 3e-04 Identities = 133/168 (79%) Strand = Plus / Plus Query: 406 tacatgtcaggatttactgctcgttggaaatactactttatatggtcagtttcagaagct 465 |||||| | ||||| || ||||||||||| || ||||| || |||||| ||||||| ||| Sbjct: 786 tacatggctggattcacggctcgttggaagtattacttcatctggtcaatttcagaggct 845 Query: 466 gcaattattatatctggcctgggtttcaccggttggtctgattcttctcccccaaaagcc 525 | ||||| || ||||| ||||| ||| |||||| ||||| | || | ||||| || Sbjct: 846 tctattatcatctctggtttgggtatcagtggttggactgatgatgcttcaccaaagccc 905 Query: 526 aaatgggaccgtgctataaatgttgatattctgggcgtcgaactagct 573 |||||||||||||| | || || |||||||| || || ||||||||| Sbjct: 906 aaatgggaccgtgccaagaacgtagatattctcggtgttgaactagct 953
>emb|AL163279.2|HS21C079 Homo sapiens chromosome 21 segment HS21C079 Length = 340000 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 198 tgagatgaaagattatcttgaat 220 ||||||||||||||||||||||| Sbjct: 56758 tgagatgaaagattatcttgaat 56780
>gb|AC157511.2| Mus musculus BAC clone RP24-456J10 from chromosome 9, complete sequence Length = 167921 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 914 agaccttggcatcctacaagagc 936 ||||||||||||||||||||||| Sbjct: 142064 agaccttggcatcctacaagagc 142042
>emb|AL954224.1|PT270D20 Pan troglodytes chromosome 22 BAC PTB-270D20, complete sequence Length = 192642 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 198 tgagatgaaagattatcttgaat 220 ||||||||||||||||||||||| Sbjct: 147743 tgagatgaaagattatcttgaat 147765
>gb|AC155175.3| Pan troglodytes BAC clone CH251-72L14 from chromosome unknown, complete sequence Length = 171893 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 198 tgagatgaaagattatcttgaat 220 ||||||||||||||||||||||| Sbjct: 114022 tgagatgaaagattatcttgaat 114044
>dbj|BS000164.1| Pan troglodytes chromosome 22 clone:RP43-027I07, map 22, complete sequences Length = 152825 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 198 tgagatgaaagattatcttgaat 220 ||||||||||||||||||||||| Sbjct: 57871 tgagatgaaagattatcttgaat 57893
>gb|AF129408.4| Homo sapiens chromosome 21 clone RP1-31K18 map q22.2, complete sequence Length = 141843 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 198 tgagatgaaagattatcttgaat 220 ||||||||||||||||||||||| Sbjct: 48644 tgagatgaaagattatcttgaat 48666
>gb|AC104442.2| Homo sapiens chromosome 3 clone RP11-905F6, complete sequence Length = 219227 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1106 ttttctgtttacttcatgtttgtgaa 1131 ||||||||||||||||| |||||||| Sbjct: 132484 ttttctgtttacttcatatttgtgaa 132509
>emb|AL022724.2|HS413H6 Human DNA sequence from clone RP3-413H6 on chromosome 6p22.3-24.3 Contains the gene for a novel protein similar to hamster androgen-dependent expressed protein and a novel gene, complete sequence Length = 142599 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1107 tttctgtttacttcatgtttgt 1128 |||||||||||||||||||||| Sbjct: 94499 tttctgtttacttcatgtttgt 94478
>gb|CP000109.2| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ttaatggttttaacgttgaaa 39 ||||||||||||||||||||| Sbjct: 1858434 ttaatggttttaacgttgaaa 1858454
>gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0045P14, complete sequence Length = 121894 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 gaaaggaaaggaatatgggcc 246 ||||||||||||||||||||| Sbjct: 70493 gaaaggaaaggaatatgggcc 70513
>gb|AC158933.3| Mus musculus chromosome 1, clone RP23-300M22, complete sequence Length = 152221 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 atggtctcttgaaggaagaagaggg 92 |||||||||||||| |||||||||| Sbjct: 52245 atggtctcttgaagaaagaagaggg 52221
>gb|AC113405.2| Homo sapiens chromosome 5 clone RP11-467C9, complete sequence Length = 134319 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 35 tgaaagtcatttcatgctcaatgaa 59 ||||| ||||||||||||||||||| Sbjct: 41738 tgaaaatcatttcatgctcaatgaa 41714
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 gaaaggaaaggaatatgggcc 246 ||||||||||||||||||||| Sbjct: 10880973 gaaaggaaaggaatatgggcc 10880993
>gb|AC020556.7| Homo sapiens BAC clone RP11-507B10 from 4, complete sequence Length = 186092 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1106 ttttctgtttacttcatgttt 1126 ||||||||||||||||||||| Sbjct: 185639 ttttctgtttacttcatgttt 185659
>gb|AC025821.7| Homo sapiens BAC clone RP11-472F4 from 4, complete sequence Length = 178378 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 451 tcagtttcagaagctgcaattatta 475 |||||||||||||||||||| |||| Sbjct: 9074 tcagtttcagaagctgcaatgatta 9098
>emb|AL136313.27| Human DNA sequence from clone RP4-551N11 on chromosome 6, complete sequence Length = 128152 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 attcttctcccccaaaagcca 526 ||||||||||||||||||||| Sbjct: 34466 attcttctcccccaaaagcca 34486
>gb|AC008382.6| Homo sapiens chromosome 5 clone CTC-218P2, complete sequence Length = 252015 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 847 aattgtgcatacaccatgatg 867 ||||||||||||||||||||| Sbjct: 101228 aattgtgcatacaccatgatg 101248
>gb|AC160568.2| Pan troglodytes BAC clone CH251-293A11 from chromosome unknown, complete sequence Length = 159393 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 ctgctgtggcagccactttgctgga 189 ||||||||||||||||| ||||||| Sbjct: 37347 ctgctgtggcagccactctgctgga 37371
>gb|AC026410.5| Homo sapiens chromosome 5 clone CTC-512J14, complete sequence Length = 170591 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 847 aattgtgcatacaccatgatg 867 ||||||||||||||||||||| Sbjct: 48726 aattgtgcatacaccatgatg 48746
>gb|AC158158.6| Mus musculus chromosome 1, clone RP23-10D8, complete sequence Length = 193479 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 674 gtttccttcagttgttgggta 694 ||||||||||||||||||||| Sbjct: 152242 gtttccttcagttgttgggta 152262
>gb|AC010546.10| Homo sapiens chromosome 16 clone RP11-50O21, complete sequence Length = 181955 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 ctgctgtggcagccactttgctgga 189 ||||||||||||||||| ||||||| Sbjct: 92456 ctgctgtggcagccactctgctgga 92480
>gb|AC110266.15| Mus musculus chromosome 1, clone RP23-319C1, complete sequence Length = 177482 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 674 gtttccttcagttgttgggta 694 ||||||||||||||||||||| Sbjct: 59601 gtttccttcagttgttgggta 59621
>gb|AC174468.2| Medicago truncatula chromosome 2 BAC clone mth2-89f22, complete sequence Length = 89512 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1134 aatatcaaatttagcaaaaag 1154 ||||||||||||||||||||| Sbjct: 58620 aatatcaaatttagcaaaaag 58640 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 242,155,619 Number of extensions: 13116390 Number of successful extensions: 286417 Number of sequences better than 10.0: 40 Number of HSP's gapped: 286401 Number of HSP's successfully gapped: 78 Length of query: 1254 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1231 Effective length of database: 18,503,978,556 Effective search space: 22778397602436 Effective search space used: 22778397602436 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
