ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf46d20 |
|---|---|
| Clone Library Name | barley_pub |
>O22899:DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase -| Arabidopsis thaliana (Mouse-ear cress) Length = 729 Score = 860 bits (2223), Expect = 0.0 Identities = 438/526 (83%), Positives = 467/526 (88%), Gaps = 6/526 (1%) Frame = +2 Query: 83 MGTERKRKVSLFDVVDKTSVSSKLGRA-GINGXXXXXXXNPSINRWNGRPYSARYLEILE 259 MGTERKRKVSLFDV++ S+SSK ++ G+ + IN+WNG+ YS RY EILE Sbjct: 1 MGTERKRKVSLFDVMEDPSLSSKNTKSNGLGLAAAAGGGSNLINKWNGKAYSQRYFEILE 60 Query: 260 KRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRS-----MVA 424 KRR LPVW QKD+FL L NQTLILVGETGSGKTTQIPQFVL+A N +V Sbjct: 61 KRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVG 120 Query: 425 CTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADP 604 CTQP +EMDV+IGEEVGYSIRFEDC+S +T+LKYLTDGMLLREAMADP Sbjct: 121 CTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADP 180 Query: 605 LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPL 784 LLERYKVI+LDEAHERTLATDVLFGLLKEVL+NRPDLKLVVMSATLEAEKFQ YFSGAPL Sbjct: 181 LLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPL 240 Query: 785 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKIN 964 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP GDILVFLTGEEEIEDACRKIN Sbjct: 241 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKIN 300 Query: 965 KEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLT 1144 KEV+N+GDQVGPVKVVPLYSTLPPAMQQKIFDPAP PL EGGPAGRKIVVSTNIAETSLT Sbjct: 301 KEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLT 360 Query: 1145 IDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKS 1324 IDGIVYVIDPGF+KQKVYNPRIRVESLLVSPISKASAHQR+GRAGRT+PGKCFRLYTEKS Sbjct: 361 IDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKS 420 Query: 1325 FNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 1504 FN DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL Sbjct: 421 FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 480 Query: 1505 DDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 DDEGNLT GE+MSEFPLDPQMSKML++SP +NCSNEILS+SAMLS Sbjct: 481 DDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLS 526 Score = 389 bits (999), Expect = e-107 Identities = 179/201 (89%), Positives = 193/201 (96%) Frame = +1 Query: 2011 VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMK 2190 VPNCF+RPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP WC+ENFVN RAMK Sbjct: 527 VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMK 586 Query: 2191 SADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKD 2370 SADNVRQQLVRIM+RFNLKMCSTDFNSR+YYVNIRKAML+GYFMQVAHLERTGHYLTVKD Sbjct: 587 SADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKD 646 Query: 2371 NQVVHLHPSNCMDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYYDLTNFPSCE 2550 NQVVHLHPSNC+DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWL+D+A YYDL+NFP+CE Sbjct: 647 NQVVHLHPSNCLDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPNCE 706 Query: 2551 AKRVLERLHNKRERERAASRN 2613 AKR LE+L+ KRERE+ S+N Sbjct: 707 AKRALEKLYKKREREKNESKN 727
>Q5RAZ4:DHX15_PONPY Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 -| Pongo pygmaeus (Orangutan) Length = 795 Score = 670 bits (1728), Expect = 0.0 Identities = 332/482 (68%), Positives = 401/482 (83%), Gaps = 3/482 (0%) Frame = +2 Query: 206 INRWNGRPYSARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFV 385 IN + P++ RY +IL+KR LPVW+ KD F +L +Q+ +LVGETGSGKTTQIPQ+ Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174 Query: 386 LE-AEGLSN-RSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLK 559 +E L + VACTQP +EMDV +G+EVGYSIRFEDCSS KT+LK Sbjct: 175 VEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILK 234 Query: 560 YLTDGMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 739 Y+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VMSAT Sbjct: 235 YMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSAT 294 Query: 740 LEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPA-GDILV 916 L+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD+L+ Sbjct: 295 LDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLL 354 Query: 917 FLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPA 1096 FLTG+EEI++AC++I +EV+++G +VG +K++PLYSTLPP QQ+IF+P PPP K+ G Sbjct: 355 FLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEP-PPPKKQNGAI 413 Query: 1097 GRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRA 1276 GRK+VVSTNIAETSLTIDG+V+VIDPGF+KQKVYNPRIRVESLLV+ ISKASA QRAGRA Sbjct: 414 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 473 Query: 1277 GRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 1456 GRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDPPAP Sbjct: 474 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 533 Query: 1457 ETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAM 1636 ETLMRALE+LNYL AL+D+G+LT LG MM+EFPLDPQ++KM++ S YNCSNE+LSI+AM Sbjct: 534 ETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAM 593 Query: 1637 LS 1642 LS Sbjct: 594 LS 595 Score = 312 bits (800), Expect = 5e-84 Identities = 141/188 (75%), Positives = 165/188 (87%) Frame = +1 Query: 2011 VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMK 2190 VP CF+RP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCY+NF+N R++ Sbjct: 596 VPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLM 655 Query: 2191 SADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKD 2370 SADNVRQQL RIM RFNL STDF SR+YY+NIRKA+++GYFMQVAHLERTGHYLTVKD Sbjct: 656 SADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKD 715 Query: 2371 NQVVHLHPSNCMDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYYDLTNFPSCE 2550 NQVV LHPS +DHKPEWV+YNE+VLTT+N+IRT TDI+ EWL+ IAPQYYD++NFP CE Sbjct: 716 NQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCE 775 Query: 2551 AKRVLERL 2574 AKR L+R+ Sbjct: 776 AKRQLDRI 783
>O35286:DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 -| Mus musculus (Mouse) Length = 795 Score = 670 bits (1728), Expect = 0.0 Identities = 332/482 (68%), Positives = 401/482 (83%), Gaps = 3/482 (0%) Frame = +2 Query: 206 INRWNGRPYSARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFV 385 IN + P++ RY +IL+KR LPVW+ KD F +L +Q+ +LVGETGSGKTTQIPQ+ Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174 Query: 386 LE-AEGLSN-RSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLK 559 +E L + VACTQP +EMDV +G+EVGYSIRFEDCSS KT+LK Sbjct: 175 VEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILK 234 Query: 560 YLTDGMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 739 Y+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VMSAT Sbjct: 235 YMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSAT 294 Query: 740 LEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPA-GDILV 916 L+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD+L+ Sbjct: 295 LDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLL 354 Query: 917 FLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPA 1096 FLTG+EEI++AC++I +EV+++G +VG +K++PLYSTLPP QQ+IF+P PPP K+ G Sbjct: 355 FLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEP-PPPKKQNGAI 413 Query: 1097 GRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRA 1276 GRK+VVSTNIAETSLTIDG+V+VIDPGF+KQKVYNPRIRVESLLV+ ISKASA QRAGRA Sbjct: 414 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 473 Query: 1277 GRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 1456 GRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDPPAP Sbjct: 474 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 533 Query: 1457 ETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAM 1636 ETLMRALE+LNYL AL+D+G+LT LG MM+EFPLDPQ++KM++ S YNCSNE+LSI+AM Sbjct: 534 ETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAM 593 Query: 1637 LS 1642 LS Sbjct: 594 LS 595 Score = 312 bits (800), Expect = 5e-84 Identities = 141/188 (75%), Positives = 165/188 (87%) Frame = +1 Query: 2011 VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMK 2190 VP CF+RP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCY+NF+N R++ Sbjct: 596 VPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLM 655 Query: 2191 SADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKD 2370 SADNVRQQL RIM RFNL STDF SR+YY+NIRKA+++GYFMQVAHLERTGHYLTVKD Sbjct: 656 SADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKD 715 Query: 2371 NQVVHLHPSNCMDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYYDLTNFPSCE 2550 NQVV LHPS +DHKPEWV+YNE+VLTT+N+IRT TDI+ EWL+ IAPQYYD++NFP CE Sbjct: 716 NQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCE 775 Query: 2551 AKRVLERL 2574 AKR L+R+ Sbjct: 776 AKRQLDRI 783
>O43143:DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 -| Homo sapiens (Human) Length = 795 Score = 670 bits (1728), Expect = 0.0 Identities = 332/482 (68%), Positives = 401/482 (83%), Gaps = 3/482 (0%) Frame = +2 Query: 206 INRWNGRPYSARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFV 385 IN + P++ RY +IL+KR LPVW+ KD F +L +Q+ +LVGETGSGKTTQIPQ+ Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174 Query: 386 LE-AEGLSN-RSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLK 559 +E L + VACTQP +EMDV +G+EVGYSIRFEDCSS KT+LK Sbjct: 175 VEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILK 234 Query: 560 YLTDGMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 739 Y+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VMSAT Sbjct: 235 YMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSAT 294 Query: 740 LEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPA-GDILV 916 L+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD+L+ Sbjct: 295 LDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLL 354 Query: 917 FLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPA 1096 FLTG+EEI++AC++I +EV+++G +VG +K++PLYSTLPP QQ+IF+P PPP K+ G Sbjct: 355 FLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEP-PPPKKQNGAI 413 Query: 1097 GRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRA 1276 GRK+VVSTNIAETSLTIDG+V+VIDPGF+KQKVYNPRIRVESLLV+ ISKASA QRAGRA Sbjct: 414 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 473 Query: 1277 GRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 1456 GRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDPPAP Sbjct: 474 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 533 Query: 1457 ETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAM 1636 ETLMRALE+LNYL AL+D+G+LT LG MM+EFPLDPQ++KM++ S YNCSNE+LSI+AM Sbjct: 534 ETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAM 593 Query: 1637 LS 1642 LS Sbjct: 594 LS 595 Score = 312 bits (800), Expect = 5e-84 Identities = 141/188 (75%), Positives = 165/188 (87%) Frame = +1 Query: 2011 VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMK 2190 VP CF+RP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCY+NF+N R++ Sbjct: 596 VPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLM 655 Query: 2191 SADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKD 2370 SADNVRQQL RIM RFNL STDF SR+YY+NIRKA+++GYFMQVAHLERTGHYLTVKD Sbjct: 656 SADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKD 715 Query: 2371 NQVVHLHPSNCMDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYYDLTNFPSCE 2550 NQVV LHPS +DHKPEWV+YNE+VLTT+N+IRT TDI+ EWL+ IAPQYYD++NFP CE Sbjct: 716 NQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCE 775 Query: 2551 AKRVLERL 2574 AKR L+R+ Sbjct: 776 AKRQLDRI 783
>O42945:DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43 -| Schizosaccharomyces pombe (Fission yeast) Length = 735 Score = 649 bits (1675), Expect = 0.0 Identities = 326/482 (67%), Positives = 390/482 (80%), Gaps = 4/482 (0%) Frame = +2 Query: 209 NRWNGRPYSARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVL 388 N +N +P+S Y +ILE RR LPV+QQ++EFL++ +NQ ++ VGETGSGKTTQIPQFVL Sbjct: 54 NFFNDKPFSQNYFKILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVL 113 Query: 389 --EAEGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKY 562 E L+N + +ACTQP +EMDV +GEEVGY+IRFEDCS T+LKY Sbjct: 114 YDELPHLTN-TQIACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKY 172 Query: 563 LTDGMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATL 742 +TDGMLLREAM D +L RY I+LDEAHERTLATD+L GL+K + RPDLK++VMSATL Sbjct: 173 MTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATL 232 Query: 743 EAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFL 922 +A+KFQ YF APL+ VPGR +PVEI+YTQEPERDYLEAA+RTV+QIH+ E GDILVFL Sbjct: 233 DAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFL 292 Query: 923 TGEEEIEDACRKINKEVNNMGDQ--VGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPA 1096 TGEEEIEDACRKI E +++ + GP+KV PLY +LPP QQ+IF+P P K G Sbjct: 293 TGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSG--Y 350 Query: 1097 GRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRA 1276 GRK+V+STNIAETSLTIDGIVYV+DPGFSKQK+YNPRIRVESLLVSPISKASA QRAGRA Sbjct: 351 GRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRA 410 Query: 1277 GRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 1456 GRT+PGKCFRLYTE++F +L QTYPEILRSNL++TVL LKKLGIDDLVHFD+MDPPAP Sbjct: 411 GRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAP 470 Query: 1457 ETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAM 1636 ET+MRALE LNYL LDD G+LT LG SEFPLDP ++ ML+ SP + CSNE+LS++A+ Sbjct: 471 ETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTAL 530 Query: 1637 LS 1642 LS Sbjct: 531 LS 532 Score = 222 bits (565), Expect = 8e-57 Identities = 112/217 (51%), Positives = 150/217 (69%), Gaps = 7/217 (3%) Frame = +1 Query: 1981 FVCYYHILCL-----VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNED 2145 F C +L L VPN F+RP A+K ADE + +F H DGDHLTLLNVYHAYK Sbjct: 518 FYCSNEVLSLTALLSVPNVFVRPNSARKLADEMRQQFTHPDGDHLTLLNVYHAYKSGEGT 577 Query: 2146 PTWCYENFVNARAMKSADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQ 2325 WC+ +F++ RA+ SADNVR+QL R M R +++ ST F+ + YYVNIR+A++SG+FMQ Sbjct: 578 ADWCWNHFLSHRALISADNVRKQLRRTMERQEVELISTPFDDKNYYVNIRRALVSGFFMQ 637 Query: 2326 VAHLERTG-HYLTVKDNQVVHLHPSNCMDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLI 2502 VA G +Y+T+KDNQVV LHPS + PEWV+YNE+VLTT++FIR VT IR EWLI Sbjct: 638 VAKKSANGKNYVTMKDNQVVSLHPSCGLSVTPEWVVYNEFVLTTKSFIRNVTAIRPEWLI 697 Query: 2503 DIAPQYYDLTNFP-SCEAKRVLERLHNKRERERAASR 2610 ++AP YYDL +F + E K L++++ R + +R Sbjct: 698 ELAPNYYDLDDFDNNKEVKSALQKVYQMAARSKKNAR 734
>Q20875:DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase F56D2.6| - Caenorhabditis elegans Length = 739 Score = 646 bits (1667), Expect = 0.0 Identities = 321/487 (65%), Positives = 389/487 (79%), Gaps = 8/487 (1%) Frame = +2 Query: 206 INRWNGRPYSARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFV 385 IN +N +P+S RY I EKR LPVW+ K++F+ +LR+NQ + LVGETGSGKTTQIPQ+ Sbjct: 54 INPYNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWA 113 Query: 386 LE-------AEGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSH 544 +E + +VACTQP EEMDV +G+EVGYSIRFEDC S Sbjct: 114 VEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISE 173 Query: 545 KTVLKYLTDGMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLV 724 +TVLKY TDGMLLREAM PLL++YKV++LDEAHERTLATD+L GL+KE+++NR D+K+V Sbjct: 174 RTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVV 233 Query: 725 VMSATLEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPA- 901 +MSATL+A KFQ YF PL+ VPGR PVEIF+T E+DYLEAAIRTV+QIHM E Sbjct: 234 IMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVE 293 Query: 902 GDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLK 1081 GDIL+FLTG+EEIE+AC++I++E+ +G G + +PLYSTLPPA QQ+IF+PAPP + Sbjct: 294 GDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPN-R 352 Query: 1082 EGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQ 1261 G RK V+STNIAETSLTIDG+V+VIDPGFSKQKVYNPRIRVESLLV PISKASA Q Sbjct: 353 PNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQ 412 Query: 1262 RAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFM 1441 RAGRAGRT+PGKCFRLYTE ++ ++Q QTYPEILRSNL + VL LKKLG +DLVHFDFM Sbjct: 413 RAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFM 472 Query: 1442 DPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEIL 1621 DPPAPETLMRALE+LNYL A++D+G LT LG +M+EFPLDPQ++KML+ S NCSNEIL Sbjct: 473 DPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEIL 532 Query: 1622 SISAMLS 1642 SI+AMLS Sbjct: 533 SITAMLS 539 Score = 293 bits (751), Expect = 2e-78 Identities = 130/194 (67%), Positives = 161/194 (82%) Frame = +1 Query: 2011 VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMK 2190 VP C++RP E + ADEAKARF HIDGDHLTLLNVYH++KQN EDP WCY+NF+N R MK Sbjct: 540 VPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMK 599 Query: 2191 SADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKD 2370 +AD VR QL R+M ++NL+ STDF SR+YY+NIRKA+++G+FMQVAHLER+GHY+TVKD Sbjct: 600 TADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKD 659 Query: 2371 NQVVHLHPSNCMDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYYDLTNFPSCE 2550 NQ+V+LHPS +DHKPEW +YNE+VLTT+NFIRTVTD+R EWL+ IAPQYYDL NFP + Sbjct: 660 NQLVNLHPSTVLDHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPDGD 719 Query: 2551 AKRVLERLHNKRER 2592 KR L + +R Sbjct: 720 TKRKLTTVMQTLQR 733
>P53131:PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 -| Saccharomyces cerevisiae (Baker's yeast) Length = 767 Score = 632 bits (1630), Expect = e-180 Identities = 327/487 (67%), Positives = 391/487 (80%), Gaps = 8/487 (1%) Frame = +2 Query: 206 INRWNGRPYSARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFV 385 IN + GR ++ +Y++IL+ RR LPV Q+DEFL++ ++NQ ++ VGETGSGKTTQIPQFV Sbjct: 71 INPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFV 130 Query: 386 L--EAEGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLK 559 L E L N + VACTQP EEMDV +GEEVGYSIRFE+ +S+KT+LK Sbjct: 131 LFDEMPHLEN-TQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILK 189 Query: 560 YLTDGMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 739 Y+TDGMLLREAM D L RY I+LDEAHERTLATD+L GLLK+V+K RPDLK+++MSAT Sbjct: 190 YMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSAT 249 Query: 740 LEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVF 919 L+AEKFQ YF+ APL+ VPGR +PVE++YT E +RDYL++AIRTV+QIH E AGDIL+F Sbjct: 250 LDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLF 309 Query: 920 LTGEEEIEDACRKINKEVNNMGDQV------GPVKVVPLYSTLPPAMQQKIFDPAPPPLK 1081 LTGE+EIEDA RKI+ E GDQ+ GP+ V PLY +LPP QQ+IF+PAP Sbjct: 310 LTGEDEIEDAVRKISLE----GDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPE--S 363 Query: 1082 EGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQ 1261 G GRK+V+STNIAETSLTIDGIVYV+DPGFSKQKVYNPRIRVESLLVSPISKASA Q Sbjct: 364 HNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQ 423 Query: 1262 RAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFM 1441 RAGRAGRT+PGKCFRLYTE++F +L Q+YPEILRSNL++TVL LKKLGIDDLVHFDFM Sbjct: 424 RAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFM 483 Query: 1442 DPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEIL 1621 DPPAPET+MRALE LNYL LDDEGNLT LG + S+FPLDP ++ ML+ S + CS EIL Sbjct: 484 DPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEIL 543 Query: 1622 SISAMLS 1642 +I AMLS Sbjct: 544 TIVAMLS 550 Score = 221 bits (562), Expect = 2e-56 Identities = 111/215 (51%), Positives = 152/215 (70%), Gaps = 11/215 (5%) Frame = +1 Query: 1981 FVCYYHILCLV-----PNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNED 2145 F C IL +V PN F+RP + +K AD+AK F H DGDH+TLLNVYHA+K + Sbjct: 536 FQCSQEILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAY 595 Query: 2146 P----TWCYENFVNARAMKSADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSG 2313 WC ++++N R++ +ADN+R QL R+M R+NL++ +TD+ S +Y+ NIRKA+ SG Sbjct: 596 EYGIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASG 655 Query: 2314 YFMQVAHLERTGH--YLTVKDNQVVHLHPSNCMDHKPEWVIYNEYVLTTRNFIRTVTDIR 2487 +FMQVA +R+G Y+TVKDNQ V +HPS + H EWVIYNE+VLT++N+IRTVT +R Sbjct: 656 FFMQVAK-KRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVR 714 Query: 2488 GEWLIDIAPQYYDLTNFPSCEAKRVLERLHNKRER 2592 EWLI+IAP YYDL+NF + K LER+ K +R Sbjct: 715 PEWLIEIAPAYYDLSNFQKGDVKLSLERIKEKVDR 749
>O17438:DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 -| Strongylocentrotus purpuratus (Purple sea urchin) Length = 455 Score = 567 bits (1462), Expect = e-161 Identities = 281/364 (77%), Positives = 321/364 (88%), Gaps = 1/364 (0%) Frame = +2 Query: 554 LKYLTDGMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMS 733 +KY+TDGMLLRE M DPLLERY VI+LDEAHERT+ATD+L GLLKEV K R DLKLVVMS Sbjct: 1 IKYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVEKQRSDLKLVVMS 60 Query: 734 ATLEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPA-GDI 910 ATL+A KFQ YF APLM VPGR HPVEIFYT EPERDYLEAAIRTVVQIHMCE GD+ Sbjct: 61 ATLDAGKFQHYFDNAPLMTVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 120 Query: 911 LVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGG 1090 L+FLTG+EEIE+AC++I +EV+N+G +VG +K +PLYSTLPPAMQQ+IF+ APP K G Sbjct: 121 LLFLTGQEEIEEACKRIKREVDNLGPEVGDLKTIPLYSTLPPAMQQRIFEHAPPN-KANG 179 Query: 1091 PAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAG 1270 GRK+VVSTNIAETSLTIDG+V+VIDPGF+KQKVYNPRIRVESLLVSPISKASA QR G Sbjct: 180 AIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRVG 239 Query: 1271 RAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 1450 RAGRT+PGKCFRLYTEK+++ ++Q TYPEILRSNL VL LKKLGIDDLVHFDFMDPP Sbjct: 240 RAGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPP 299 Query: 1451 APETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSIS 1630 APETLMRALE+LNYLGALDD G+LT LG MM+EFPLDPQ++KM++ S Y+CSNEILS++ Sbjct: 300 APETLMRALELLNYLGALDDSGDLTRLGSMMAEFPLDPQLAKMVIASTDYSCSNEILSVT 359 Query: 1631 AMLS 1642 AMLS Sbjct: 360 AMLS 363 Score = 150 bits (379), Expect = 3e-35 Identities = 67/92 (72%), Positives = 79/92 (85%) Frame = +1 Query: 2011 VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMK 2190 VP CFLRP EA+K ADEAK RF HIDGDHLTLLNVYHA+KQNNEDP WCY+NF+ R++K Sbjct: 364 VPQCFLRPNEAKKLADEAKMRFAHIDGDHLTLLNVYHAFKQNNEDPQWCYDNFIQYRSLK 423 Query: 2191 SADNVRQQLVRIMTRFNLKMCSTDFNSREYYV 2286 SAD+VRQQL RIM RF L+ ST+FNS++YY+ Sbjct: 424 SADSVRQQLARIMDRFALQRTSTNFNSKDYYL 455
>Q14562:DHX8_HUMAN ATP-dependent RNA helicase DHX8 - Homo sapiens (Human)| Length = 1220 Score = 528 bits (1360), Expect = e-149 Identities = 260/466 (55%), Positives = 349/466 (74%) Frame = +2 Query: 245 LEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVA 424 + ILE+R +LP+++ K++ ++ + DNQ LI++GETGSGKTTQI Q++ EA G ++R + Sbjct: 556 MSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA-GYTSRGKIG 614 Query: 425 CTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADP 604 CTQP EE +G+EVGY+IRFEDC+S +TV+KY+TDGMLLRE + DP Sbjct: 615 CTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDP 674 Query: 605 LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPL 784 L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SATL+A KF YF AP+ Sbjct: 675 DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPI 734 Query: 785 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKIN 964 +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILVFLTG+EEI+ AC + Sbjct: 735 FTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILY 794 Query: 965 KEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLT 1144 + + ++G V + ++P+YS LP MQ +IFDPAP P RK+V++TNIAETSLT Sbjct: 795 ERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAP-------PGSRKVVIATNIAETSLT 847 Query: 1145 IDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKS 1324 IDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QRAGRAGRT PGKC+RLYTE++ Sbjct: 848 IDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERA 907 Query: 1325 FNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 1504 + ++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P ETL+ A+E L LGAL Sbjct: 908 YRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGAL 967 Query: 1505 DDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 DDEG LT LG M+EFPL+P + KML++S CS E+L+I +MLS Sbjct: 968 DDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLS 1013 Score = 157 bits (398), Expect = 2e-37 Identities = 80/201 (39%), Positives = 126/201 (62%), Gaps = 4/201 (1%) Frame = +1 Query: 2011 VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMK 2190 V N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCYENF+ AR+++ Sbjct: 1014 VQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1073 Query: 2191 SADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKD 2370 A ++R+Q++ IM R L + S ++ V ++KA+ SG+F A + Y T+ D Sbjct: 1074 RAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTLID 1129 Query: 2371 NQVVHLHPSNCM-DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYY---DLTNF 2538 QVV++HPS+ + + +PEWV+Y+E VLTT+ ++R VT I WL++ AP ++ D T Sbjct: 1130 QQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKL 1189 Query: 2539 PSCEAKRVLERLHNKRERERA 2601 + ++ LE L+N+ E A Sbjct: 1190 SKQKKQQRLEPLYNRYEEPNA 1210
>Q38953:DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase -| Arabidopsis thaliana (Mouse-ear cress) Length = 1168 Score = 525 bits (1353), Expect = e-148 Identities = 258/465 (55%), Positives = 342/465 (73%) Frame = +2 Query: 245 LEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVA 424 L I E+R +LP+++ K E ++ + DNQ L+++GETGSGKTTQ+ Q++ EA G + + + Sbjct: 506 LSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA-GYTTKGKIG 564 Query: 425 CTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADP 604 CTQP EE +GEEVGY+IRFEDC+ TV+KY+TDGMLLRE + D Sbjct: 565 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 624 Query: 605 LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPL 784 L +Y VI+LDEAHERT+ TDVLFGLLK+++K R DL+L+V SATL+AEKF GYF + Sbjct: 625 NLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNI 684 Query: 785 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKIN 964 +PGR PVEI YT++PE DYL+AA+ TV+QIH+ EP GDILVFLTG+EEI+ AC+ + Sbjct: 685 FTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLY 744 Query: 965 KEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLT 1144 + + +G V + ++P+YS LP MQ +IFDP P P RK+VV+TNIAE SLT Sbjct: 745 ERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPP-------PGKRKVVVATNIAEASLT 797 Query: 1145 IDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKS 1324 IDGI YV+DPGF+KQ VYNP+ +ESL+++PIS+ASA QRAGRAGRT PGKC+RLYTE + Sbjct: 798 IDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA 857 Query: 1325 FNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 1504 + ++ P + PEI R NL T LT+K +GI+DL+ FDFMDPP P+ L+ A+E L LGAL Sbjct: 858 YRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGAL 917 Query: 1505 DDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAML 1639 D+EG LT LG M+EFPL+P +SKML+ S CS+EIL++ AM+ Sbjct: 918 DEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMI 962 Score = 150 bits (379), Expect = 3e-35 Identities = 72/193 (37%), Positives = 123/193 (63%), Gaps = 1/193 (0%) Frame = +1 Query: 2017 NCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMKSA 2196 N F RPRE Q AD+ +A+F +GDHLTLL VY A+K N WC+ENF+ +R+++ A Sbjct: 966 NIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRA 1025 Query: 2197 DNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQ 2376 +VR+QL+ IM ++ L + + N + IRKA+ +G+F A + Y T+ +NQ Sbjct: 1026 QDVRKQLLSIMDKYKLDVVTAGKN----FTKIRKAITAGFFFHGARKDPQEGYRTLVENQ 1081 Query: 2377 VVHLHPSNCM-DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYYDLTNFPSCEA 2553 V++HPS+ + +P+WVIY++ V+TT+ ++R VT I +WL+++AP+++ +++ Sbjct: 1082 PVYIHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSK 1141 Query: 2554 KRVLERLHNKRER 2592 ++ ER+ +R Sbjct: 1142 RKRQERIEPLYDR 1154
>O42643:PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 -| Schizosaccharomyces pombe (Fission yeast) Length = 1168 Score = 518 bits (1335), Expect = e-146 Identities = 253/466 (54%), Positives = 341/466 (73%) Frame = +2 Query: 245 LEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVA 424 L + E+R LPV++ + +FL + NQ L+L+GETGSGKTTQI Q++ E S+ M+ Sbjct: 501 LSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIG 560 Query: 425 CTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADP 604 CTQP EE+ +GEEVGY+IRFED +S T +KY+TDGML RE + DP Sbjct: 561 CTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDP 620 Query: 605 LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPL 784 LL +Y VI+LDEAHERT+ATDVLFGLLK + RPDLKL+V SATL+AE+F YF P+ Sbjct: 621 LLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCPI 680 Query: 785 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKIN 964 +PGR +PVEI YT++PE DYL+AA+ TV+QIH+ E GDILVFLTG+EEI+ +C + Sbjct: 681 FTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILY 740 Query: 965 KEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLT 1144 + +GD + + ++P+YS LP +Q +IF+PAP P GRK+V++TNIAETSLT Sbjct: 741 ERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAP-------PGGRKVVIATNIAETSLT 793 Query: 1145 IDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKS 1324 IDGI YV+DPGF KQ ++P++ ++SL+V+PIS+A A QR+GRAGRT PGKC+RLYTE + Sbjct: 794 IDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESA 853 Query: 1325 FNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 1504 + ++ P PEI R NL++T+L LK +GI+DL++FDFMDPP +T++ AL+ L L AL Sbjct: 854 YRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSAL 913 Query: 1505 DDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 DDEG LT LG M++FP++PQ+SK+L+ S CS E+LSI AMLS Sbjct: 914 DDEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLS 959 Score = 144 bits (363), Expect = 2e-33 Identities = 72/177 (40%), Positives = 112/177 (63%), Gaps = 2/177 (1%) Frame = +1 Query: 2011 VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMK 2190 VPN + RPRE Q+ AD +A+F + + DHLTLLNVY +K N WCYE+++ AR M+ Sbjct: 960 VPNIWSRPREKQQEADRQRAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMR 1019 Query: 2191 SADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLE-RTGHYLTVK 2367 A++VR+QL+R+M R+ + S RE I +A+ SGYF VA + G Y T+ Sbjct: 1020 RAEDVRKQLIRLMDRYRHPVVSCG-RKREL---ILRALCSGYFTNVAKRDSHEGCYKTIV 1075 Query: 2368 DNQVVHLHPSNCMDHK-PEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYYDLTN 2535 +N V++HPS + K EWVIY+E + T++ ++ TV+ + +WL+++AP ++ N Sbjct: 1076 ENAPVYMHPSGVLFGKAAEWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFAN 1132
>Q7YR39:DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 -| Pan troglodytes (Chimpanzee) Length = 1044 Score = 512 bits (1319), Expect = e-144 Identities = 255/461 (55%), Positives = 339/461 (73%), Gaps = 1/461 (0%) Frame = +2 Query: 263 RRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSM-VACTQPX 439 RR+LPV+ ++E L + ++Q LI+ GETGSGKTTQIPQ++ E EG +N+ M +ACTQP Sbjct: 399 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFE-EGYTNKGMKIACTQPR 457 Query: 440 XXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPLLERY 619 EM V +G EVGYSIRFEDC+S +TVL+Y+TDGMLLRE +++P L Y Sbjct: 458 RVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASY 517 Query: 620 KVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLMKVPG 799 V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SAT++ +F +F AP+ ++PG Sbjct: 518 SVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPG 577 Query: 800 RLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNN 979 R PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILVFLTG+EEIE AC + Sbjct: 578 RRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRR 637 Query: 980 MGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIV 1159 +G ++ + V+P+Y+ LP MQ +IF P P P RK+VV+TNIAETSLTI+GI+ Sbjct: 638 LGSKIRELLVLPIYANLPSDMQARIFQPTP-------PGARKVVVATNIAETSLTIEGII 690 Query: 1160 YVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNGDL 1339 YV+DPGF KQK YNPR +ESL V+P SKASA+QRAGRAGR GKCFRLYT ++ +L Sbjct: 691 YVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHEL 750 Query: 1340 QPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGN 1519 + T PEI R++L N VL LK LGI DL+HFDF+DPP ETL+ ALE L LGAL+ G Sbjct: 751 EETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGE 810 Query: 1520 LTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 LT+ G M+E P+DP +SKM++ S +Y+CS EIL+++AMLS Sbjct: 811 LTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLS 851 Score = 146 bits (368), Expect = 6e-34 Identities = 74/190 (38%), Positives = 112/190 (58%), Gaps = 1/190 (0%) Frame = +1 Query: 2023 FLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMKSADN 2202 F RP++ AD A+ F GDHL LLNVY + ++ WCYENFV R+M+ A + Sbjct: 857 FYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARD 916 Query: 2203 VRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVV 2382 VR+QL ++ R + + S + Y+ +RKA+ +GYF A L R+G Y TVK Q V Sbjct: 917 VREQLEGLLERVEVGLSSCQGD----YIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTV 971 Query: 2383 HLHP-SNCMDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYYDLTNFPSCEAKR 2559 +HP S+ + +P W++Y+E VLTT+ F+R V +I WL+++AP YY AK+ Sbjct: 972 FIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKK 1031 Query: 2560 VLERLHNKRE 2589 + +++ RE Sbjct: 1032 MPKKIGKTRE 1041
>O60231:DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 -| Homo sapiens (Human) Length = 1041 Score = 512 bits (1319), Expect = e-144 Identities = 255/461 (55%), Positives = 339/461 (73%), Gaps = 1/461 (0%) Frame = +2 Query: 263 RRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSM-VACTQPX 439 RR+LPV+ ++E L + ++Q LI+ GETGSGKTTQIPQ++ E EG +N+ M +ACTQP Sbjct: 396 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFE-EGYTNKGMKIACTQPR 454 Query: 440 XXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPLLERY 619 EM V +G EVGYSIRFEDC+S +TVL+Y+TDGMLLRE +++P L Y Sbjct: 455 RVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASY 514 Query: 620 KVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLMKVPG 799 V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SAT++ +F +F AP+ ++PG Sbjct: 515 SVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPG 574 Query: 800 RLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNN 979 R PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILVFLTG+EEIE AC + Sbjct: 575 RRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRR 634 Query: 980 MGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIV 1159 +G ++ + V+P+Y+ LP MQ +IF P P P RK+VV+TNIAETSLTI+GI+ Sbjct: 635 LGSKIRELLVLPIYANLPSDMQARIFQPTP-------PGARKVVVATNIAETSLTIEGII 687 Query: 1160 YVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNGDL 1339 YV+DPGF KQK YNPR +ESL V+P SKASA+QRAGRAGR GKCFRLYT ++ +L Sbjct: 688 YVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHEL 747 Query: 1340 QPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGN 1519 + T PEI R++L N VL LK LGI DL+HFDF+DPP ETL+ ALE L LGAL+ G Sbjct: 748 EETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGE 807 Query: 1520 LTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 LT+ G M+E P+DP +SKM++ S +Y+CS EIL+++AMLS Sbjct: 808 LTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLS 848 Score = 146 bits (368), Expect = 6e-34 Identities = 74/190 (38%), Positives = 112/190 (58%), Gaps = 1/190 (0%) Frame = +1 Query: 2023 FLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMKSADN 2202 F RP++ AD A+ F GDHL LLNVY + ++ WCYENFV R+M+ A + Sbjct: 854 FYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARD 913 Query: 2203 VRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVV 2382 VR+QL ++ R + + S + Y+ +RKA+ +GYF A L R+G Y TVK Q V Sbjct: 914 VREQLEGLLERVEVGLSSCQGD----YIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTV 968 Query: 2383 HLHP-SNCMDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYYDLTNFPSCEAKR 2559 +HP S+ + +P W++Y+E VLTT+ F+R V +I WL+++AP YY AK+ Sbjct: 969 FIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKK 1028 Query: 2560 VLERLHNKRE 2589 + +++ RE Sbjct: 1029 MPKKIGKTRE 1038
>Q10752:CDC28_SCHPO Putative ATP-dependent RNA helicase cdc28 - Schizosaccharomyces pombe| (Fission yeast) Length = 1055 Score = 510 bits (1314), Expect = e-143 Identities = 251/464 (54%), Positives = 335/464 (72%) Frame = +2 Query: 263 RRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVACTQPXX 442 R++LPV+Q KD+ L+ + + Q L++V ETGSGKTTQ+PQF+ EA + CTQP Sbjct: 415 RKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQPRR 474 Query: 443 XXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPLLERYK 622 +EMDV +G+EVGYSIRFE+ +S KTV+KYLTDGMLLRE + +P L Y Sbjct: 475 VAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLASYS 534 Query: 623 VIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLMKVPGR 802 VI++DEAHERTL TD+LFGL+K++ + RPDLK+++ SAT++AEKF YF AP+ VPGR Sbjct: 535 VIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGR 594 Query: 803 LHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNNM 982 +PV+I+YT +PE +Y++AAI T++QIH +PAGDILVFLTG++EIE + + + Sbjct: 595 RYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQELCRIL 654 Query: 983 GDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVY 1162 G ++ + + P+Y+ LP +Q KIFDP P P RK+V++TNIAETS+TIDG+ + Sbjct: 655 GKRIPEIILCPIYANLPSELQAKIFDPTP-------PGARKVVLATNIAETSITIDGVNF 707 Query: 1163 VIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNGDLQ 1342 VID GF KQ +YNPR +ESL+ P S+ASA QRAGRAGR PGKCFRLYT +++N +L Sbjct: 708 VIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELD 767 Query: 1343 PQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNL 1522 T PEI R+NL N VL LK LGI++L+ FDFMD P PETLMR+LE+L LGAL++ G L Sbjct: 768 MVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALNNRGEL 827 Query: 1523 TSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLSGMST 1654 T LG M+EFP DP +SK L+ S +Y C E+LSI +ML S+ Sbjct: 828 TKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASS 871 Score = 129 bits (323), Expect = 9e-29 Identities = 67/173 (38%), Positives = 108/173 (62%), Gaps = 2/173 (1%) Frame = +1 Query: 2023 FLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMKSADN 2202 F RP++ AD+A+A F GDHLTLL++++ + + W ENF+ +++ A + Sbjct: 873 FYRPKDKIMEADKARANFTQPGGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCRARD 932 Query: 2203 VRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTG-HYLTVKDNQV 2379 VR QL + R +++ + NS E I+KA+ +GYF A L+R+G Y TVK NQ Sbjct: 933 VRDQLANLCERVEIELVT---NSSESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQT 989 Query: 2380 VHLHPSNCM-DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYYDLTN 2535 V++HPS+ + + KP+ +IY E VLTT+ + R +T+I+ EWL++I+P Y+ N Sbjct: 990 VYIHPSSSVAEKKPKVIIYFELVLTTKEYCRQITEIQPEWLLEISPHYFKPEN 1042
>Q09530:MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 -| Caenorhabditis elegans Length = 1200 Score = 508 bits (1307), Expect = e-143 Identities = 249/466 (53%), Positives = 338/466 (72%) Frame = +2 Query: 245 LEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVA 424 L ++E+R +LP++ K + + DNQ L++VGETGSGKTTQ+ Q+ +EA GL R + Sbjct: 531 LSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEA-GLGRRGKIG 589 Query: 425 CTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADP 604 CTQP EE +G +VGY+IRFEDC+S T++KY+TDGMLLRE + DP Sbjct: 590 CTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDP 649 Query: 605 LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPL 784 L Y +I+LDEAHERT+ TDVLFGLLK + RP+LKL++ SATL++ KF YF AP+ Sbjct: 650 DLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPI 709 Query: 785 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKIN 964 +PGR PVEI YT+EPE DYLEAA TV+QIH+ EP GD+LVFLTG+EEI+ +C + Sbjct: 710 FTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLY 769 Query: 965 KEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLT 1144 + + +MG V + ++P+Y LP MQ +IFDPAP RK+V++TNIAETSLT Sbjct: 770 ERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAP-------AGKRKVVIATNIAETSLT 822 Query: 1145 IDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKS 1324 IDGI YV+DPGF KQK+YNP+ ++SL+V+PIS+A+A QR+GRAGRT PGKC+RLYTE++ Sbjct: 823 IDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERA 882 Query: 1325 FNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 1504 F ++ P PEI R+NLA+T+L LK +GI++L+ FDFMD P ++++ AL L+ L AL Sbjct: 883 FRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSAL 942 Query: 1505 DDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 D +G LT LG M+EFPL+P +SK+L++S CS E+L+I AML+ Sbjct: 943 DGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLN 988 Score = 150 bits (380), Expect = 2e-35 Identities = 77/197 (39%), Positives = 121/197 (61%), Gaps = 6/197 (3%) Frame = +1 Query: 2011 VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMK 2190 V N F RP+E Q AD+ KA+F +GDHLTLL VY+++K ++ WC+ENF+ R+MK Sbjct: 989 VQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMK 1048 Query: 2191 SADNVRQQLVRIMTRFNLKM--CSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTV 2364 A ++R+QL+ IM R L M C D + ++KA+ SG+F A + Y T+ Sbjct: 1049 RAQDIRKQLLGIMDRHKLLMVSCGRDVS------RVQKAICSGFFRNAAKRDPQEGYRTL 1102 Query: 2365 KDNQVVHLHPSN-CMDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYY---DLT 2532 D Q V++HPS+ C +PEWV+Y+E V+TT+ ++R VT I +WL++ AP ++ D T Sbjct: 1103 TDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDST 1162 Query: 2533 NFPSCEAKRVLERLHNK 2583 + + + ++ L +K Sbjct: 1163 KLSTFKRNQKIDPLFDK 1179
>O45244:DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 -| Caenorhabditis elegans Length = 1008 Score = 496 bits (1276), Expect = e-139 Identities = 252/467 (53%), Positives = 333/467 (71%), Gaps = 1/467 (0%) Frame = +2 Query: 245 LEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVA 424 + I E R++LPV+ +D F+ ++++Q LI+ GETGSGKTTQ+PQ++ EA + Sbjct: 355 MSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIG 414 Query: 425 CTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADP 604 CTQP +E+ +G +VGYSIRFEDC+S KTVLKY+TDGMLLRE + +P Sbjct: 415 CTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEP 474 Query: 605 LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPL 784 L Y V+++DEAHERTL TD+LFGL+K++ + R DLKL++ SATL+AEKF +F AP+ Sbjct: 475 DLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPI 534 Query: 785 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-AGDILVFLTGEEEIEDACRKI 961 ++PGR PV+I+YTQ PE DY++AAI T++QIH+ +P GDILVFLTG+EEIE + Sbjct: 535 FRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEAL 594 Query: 962 NKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSL 1141 + +G ++ + +P+Y+ LP +Q KIF+P P RK+V++TNIAETS+ Sbjct: 595 MERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKD-------ARKVVLATNIAETSV 647 Query: 1142 TIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEK 1321 TIDGI YVIDPGFSKQ ++ R VE L V ISKA+A+QRAGRAGRT PGKCFRLYT Sbjct: 648 TIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAW 707 Query: 1322 SFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGA 1501 ++ +L+ Q PEI R+NL N VL LK LGI DLVHFDF+DPP ETL+ ALE L LGA Sbjct: 708 AYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGA 767 Query: 1502 LDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 L+ G LT LG M+EFP DP MSKM++ S +Y CS EI++I+AMLS Sbjct: 768 LNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLS 814 Score = 141 bits (355), Expect = 2e-32 Identities = 69/169 (40%), Positives = 104/169 (61%), Gaps = 2/169 (1%) Frame = +1 Query: 2023 FLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMKSADN 2202 F RP+ AD A+ F GDH+TL+NVY+ +++++ WC EN+V R MK A + Sbjct: 820 FYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARD 879 Query: 2203 VRQQLVRIMTRFNLK-MCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQV 2379 VR QLV ++ R ++ STD + IRKA+ +GYF V+ L+ TGHY TVK Sbjct: 880 VRDQLVGLLERVEIETKSSTD------TIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHT 933 Query: 2380 VHLHPSNCM-DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYY 2523 H HP++C+ + P WV+Y E V T++ F+R +++I WL+++AP YY Sbjct: 934 THPHPNSCLFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYY 982
>P24384:PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 -| Saccharomyces cerevisiae (Baker's yeast) Length = 1145 Score = 491 bits (1265), Expect = e-138 Identities = 243/466 (52%), Positives = 328/466 (70%) Frame = +2 Query: 245 LEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVA 424 L I +R+TLPV+ + E ++ +RDNQ L++VGETGSGKTTQI Q+ L+ EG SN M+ Sbjct: 474 LPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQY-LDEEGFSNYGMIG 532 Query: 425 CTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADP 604 CTQP EE+ +G +VGY+IRFED + T +KY+TDGML REA+ DP Sbjct: 533 CTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDP 592 Query: 605 LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPL 784 + +Y VI+LDEAHERT+ATDVLF LLK+ RP+LK++V SATL + KF YF P+ Sbjct: 593 EMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPI 652 Query: 785 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKIN 964 + +PG+ PVE+ Y+Q P+ DY+EAA+ V+ IH+ E GDILVFLTG+EEI+ C + Sbjct: 653 INIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILY 712 Query: 965 KEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLT 1144 V +GD +G + ++P+YS LP +Q KIF+P P RK+V +TNIAETS+T Sbjct: 713 DRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTP-------KGSRKVVFATNIAETSIT 765 Query: 1145 IDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKS 1324 IDGI YV+DPGF+K +YN R +E L+VSPIS+A A+QR GRAGRT PGKC+RLYTE + Sbjct: 766 IDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESA 825 Query: 1325 FNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 1504 F ++ T PEI R NL++T+L LK +GI+DL+ FDFMDPP ++ AL L +L +L Sbjct: 826 FYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSL 885 Query: 1505 DDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 DDEG LT+LG+ MS FP+DP +S+ L+ S CS+EI++I +MLS Sbjct: 886 DDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLS 931 Score = 126 bits (316), Expect = 6e-28 Identities = 74/204 (36%), Positives = 115/204 (56%), Gaps = 4/204 (1%) Frame = +1 Query: 2011 VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMK 2190 V N F RP++ Q AD KA+F H GDHLTLLNVY ++Q N +C NF++ R +K Sbjct: 932 VQNVFYRPKDRQLEADSKKAKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLK 991 Query: 2191 SADNVRQQLVRIMTRFNLKM--CSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTV 2364 A +V+ Q+ I + LK+ C +D + IRK +SG+FM A + Y T+ Sbjct: 992 RARDVKSQISMIFKKIGLKLISCHSDPDL------IRKTFVSGFFMNAAKRDSQVGYKTI 1045 Query: 2365 KDNQVVHLHPSNCMDHKP-EWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYYDLTNFP 2541 V +HPS+ + K E+V+Y+ VLT+R ++ VT I +WL+++AP +Y + Sbjct: 1046 NGGTEVGIHPSSSLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFYKAGDAE 1105 Query: 2542 SCEAKRV-LERLHNKRERERAASR 2610 S K+ + LHNK +++ + R Sbjct: 1106 SQSRKKAKIIPLHNKFAKDQNSWR 1129
>P34498:MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 -| Caenorhabditis elegans Length = 1131 Score = 478 bits (1230), Expect = e-134 Identities = 237/465 (50%), Positives = 332/465 (71%), Gaps = 1/465 (0%) Frame = +2 Query: 251 ILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVACT 430 I ++R LPV+ + + + V+R+N +I+VGETGSGKTTQ+ Q++LE +G + ++ CT Sbjct: 434 IKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLE-DGFGDSGLIGCT 492 Query: 431 QPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPLL 610 QP +EM V +G++VGY+IRFEDC+S KT++KY+TDG+LLRE + D L Sbjct: 493 QPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSL 552 Query: 611 ERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSG-APLM 787 ++Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SAT++A+KF +F G P Sbjct: 553 DQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTF 612 Query: 788 KVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINK 967 +PGR PVE+F+ + P DY++AA++ V IH+ GDIL+F+ G+E+IE C I + Sbjct: 613 TIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKE 672 Query: 968 EVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTI 1147 ++ + D+ P+ V+P+YS LP +Q KIF AP GG RK +V+TNIAETSLT+ Sbjct: 673 KLGEL-DEAPPLAVLPIYSQLPSDLQAKIFQRAP-----GGM--RKAIVATNIAETSLTV 724 Query: 1148 DGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSF 1327 DGI++VIDPGF K KVYNPRI +++L + P+S+ASA+QR GRAGRT PG+C+RLYTE+ F Sbjct: 725 DGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQF 784 Query: 1328 NGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD 1507 +L T PEI R+NLAN VL LK LG+DDL+ F FMD P + ++ ++ L LGALD Sbjct: 785 KDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALD 844 Query: 1508 DEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 + G LT +G M EFPLDP +SKML++S CS+E+L+I +MLS Sbjct: 845 NTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLS 889 Score = 112 bits (281), Expect = 7e-24 Identities = 57/176 (32%), Positives = 96/176 (54%), Gaps = 3/176 (1%) Frame = +1 Query: 2011 VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMK 2190 VP F RP+ ++ AD K +F + DHLT LNVY ++ + WC +N+++ +A+K Sbjct: 890 VPAIFFRPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALK 949 Query: 2191 SADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKD 2370 VR QL IM L + S N E+ + +RK + S YF A L+ G Y+ V+ Sbjct: 950 KVREVRAQLKEIMQDLKLPLIS---NGSEWDI-VRKCICSAYFHNAARLKGIGEYVNVRT 1005 Query: 2371 NQVVHLHPSNC---MDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYYDL 2529 LHP++ M P++V+Y+E ++T + +++ VT + WL ++ P +Y + Sbjct: 1006 GIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSI 1061
>Q92620:PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 - Homo| sapiens (Human) Length = 1227 Score = 468 bits (1205), Expect = e-131 Identities = 233/469 (49%), Positives = 332/469 (70%) Frame = +2 Query: 236 ARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRS 415 A+ ILE+R+ LP++ + E L ++RDN +I+VGETGSGKTTQ+ Q++ E +G ++ Sbjct: 520 AKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHE-DGYTDYG 578 Query: 416 MVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAM 595 M+ CTQP EEM +GEEVGY+IRFEDC+S T++KY+TDG+LLRE++ Sbjct: 579 MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESL 638 Query: 596 ADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSG 775 + L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SAT++AEKF +F Sbjct: 639 READLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGN 698 Query: 776 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACR 955 P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+F+ G+E+IE Sbjct: 699 VPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSD 758 Query: 956 KINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAET 1135 +I + + + + + V+P+YS LP +Q KIF AP + RK +V+TNIAET Sbjct: 759 QIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV-------RKCIVATNIAET 810 Query: 1136 SLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYT 1315 SLT+DGI++VID G+ K KV+NPRI +++L + PIS+A+A+QR+GRAGRT PG+CFRLYT Sbjct: 811 SLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYT 870 Query: 1316 EKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 1495 + ++ +L T PEI R+NLAN VL LK LG+ DL+ F FMDPP + ++ ++ L L Sbjct: 871 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 930 Query: 1496 GALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 GALD+ G LTS G +M EFPLDP +SKML++S CS+EIL I +MLS Sbjct: 931 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLS 979 Score = 133 bits (334), Expect = 5e-30 Identities = 63/178 (35%), Positives = 106/178 (59%), Gaps = 5/178 (2%) Frame = +1 Query: 2011 VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMK 2190 VP F RP+ ++ +D+ + +F + DHLT LNVY +K NN WC ++F++A+AM+ Sbjct: 980 VPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMR 1039 Query: 2191 SADNVRQQLVRIMT--RFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTV 2364 VR QL IM R +L C TD++ +RK + + YF Q A L+ G Y+ + Sbjct: 1040 KVREVRAQLKDIMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYVNI 1093 Query: 2365 KDNQVVHLHPSNC---MDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYYDL 2529 + HLHP++ M + P++++Y+E V+TT+ +++ VT + GEWL ++ P +Y + Sbjct: 1094 RTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1151
>Q17R09:PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 - Bos| taurus (Bovine) Length = 1227 Score = 468 bits (1205), Expect = e-131 Identities = 233/469 (49%), Positives = 332/469 (70%) Frame = +2 Query: 236 ARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRS 415 A+ ILE+R+ LP++ + E L ++RDN +I+VGETGSGKTTQ+ Q++ E +G ++ Sbjct: 520 AKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHE-DGYTDYG 578 Query: 416 MVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAM 595 M+ CTQP EEM +GEEVGY+IRFEDC+S T++KY+TDG+LLRE++ Sbjct: 579 MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESL 638 Query: 596 ADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSG 775 + L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SAT++AEKF +F Sbjct: 639 READLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGN 698 Query: 776 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACR 955 P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+F+ G+E+IE Sbjct: 699 VPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSD 758 Query: 956 KINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAET 1135 +I + + + + + V+P+YS LP +Q KIF AP + RK +V+TNIAET Sbjct: 759 QIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV-------RKCIVATNIAET 810 Query: 1136 SLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYT 1315 SLT+DGI++VID G+ K KV+NPRI +++L + PIS+A+A+QR+GRAGRT PG+CFRLYT Sbjct: 811 SLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYT 870 Query: 1316 EKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 1495 + ++ +L T PEI R+NLAN VL LK LG+ DL+ F FMDPP + ++ ++ L L Sbjct: 871 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 930 Query: 1496 GALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 GALD+ G LTS G +M EFPLDP +SKML++S CS+EIL I +MLS Sbjct: 931 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLS 979 Score = 131 bits (330), Expect = 1e-29 Identities = 62/178 (34%), Positives = 106/178 (59%), Gaps = 5/178 (2%) Frame = +1 Query: 2011 VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMK 2190 VP F RP+ ++ +D+ + +F + DHL+ LNVY +K NN WC ++F++A+AM+ Sbjct: 980 VPAIFYRPKGREEESDQIREKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMR 1039 Query: 2191 SADNVRQQLVRIMT--RFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTV 2364 VR QL IM R +L C TD++ +RK + + YF Q A L+ G Y+ + Sbjct: 1040 KVREVRAQLKDIMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYVNI 1093 Query: 2365 KDNQVVHLHPSNC---MDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYYDL 2529 + HLHP++ M + P++++Y+E V+TT+ +++ VT + GEWL ++ P +Y + Sbjct: 1094 RTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1151
>Q9P774:PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 -| Schizosaccharomyces pombe (Fission yeast) Length = 1173 Score = 468 bits (1204), Expect = e-131 Identities = 238/469 (50%), Positives = 331/469 (70%) Frame = +2 Query: 236 ARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRS 415 AR E+R LP + +++ L V+RDNQ LI+VGETGSGKTTQ+ QF+ E +G Sbjct: 480 ARTKSYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYE-DGYHRNG 538 Query: 416 MVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAM 595 M+ CTQP EEM V +G VGYSIRFED + TV+KY+TDG+LLRE++ Sbjct: 539 MIGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESL 598 Query: 596 ADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSG 775 LE+Y VI++DEAHER+L TD+L GLLK+VL R D+KL+V SAT+ ++KF +F G Sbjct: 599 MQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGG 658 Query: 776 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACR 955 AP +PGR +PV+I + + P DY+EAA+R V+QIH+ +PAGDILVF+TG+E+IE C Sbjct: 659 APQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCE 718 Query: 956 KINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAET 1135 I +N + D + ++P+YS +P +Q KIFD A P + RK+VV+TNIAET Sbjct: 719 IIADRLNQLHD-APRLSILPIYSQMPADLQAKIFDSAEPGV-------RKVVVATNIAET 770 Query: 1136 SLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYT 1315 SLT+ GI YV+D G+ K K+YN ++ +++L V+PIS+A+A+QRAGRAGRT PG +RLYT Sbjct: 771 SLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYT 830 Query: 1316 EKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 1495 E ++ ++ T PEI R+NL+NTVL LK LG++++ FDFMD P +TLM +L L L Sbjct: 831 EMAYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTL 890 Query: 1496 GALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 GALD+ G LT+LG+ MS FP+DP +SK+++I+ Y C+ EI++I +MLS Sbjct: 891 GALDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLS 939 Score = 112 bits (281), Expect = 7e-24 Identities = 55/176 (31%), Positives = 102/176 (57%), Gaps = 3/176 (1%) Frame = +1 Query: 2011 VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMK 2190 VP+ F RP+E + +D A+ +F + DHL LLN+Y +++N +WC ++F++++ +K Sbjct: 940 VPSVFYRPKERAEESDAAREKFNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLK 999 Query: 2191 SADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKD 2370 A ++RQQLV IM++ + + S + +R+ + S YF Q A + G Y+ ++ Sbjct: 1000 RARDIRQQLVEIMSKQKISL-----ESVSDWDIVRRVLCSAYFHQAACAKGIGEYVHLRS 1054 Query: 2371 NQVVHLHPSNC---MDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYYDL 2529 HLH ++ + + P++VIY+E VLT++ ++ VT + WL + YY + Sbjct: 1055 GMPCHLHVTSSLYGLGYLPDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGGVYYSV 1110
>P20095:PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2 -| Saccharomyces cerevisiae (Baker's yeast) Length = 876 Score = 437 bits (1123), Expect = e-121 Identities = 235/475 (49%), Positives = 320/475 (67%), Gaps = 8/475 (1%) Frame = +2 Query: 239 RYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRS- 415 R L I E R+ LPV Q KDE L+ ++ NQ LI++GETGSGKTTQ+PQ+++E +G +++ Sbjct: 212 RILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVE-DGFTDQGK 270 Query: 416 -MVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSS-HKTVLKYLTDGMLLRE 589 +A TQP +EM+V +G+EVGY IRFED ++ +KTVLKY+TDGMLLRE Sbjct: 271 LQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLRE 330 Query: 590 AMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYF 769 + D L +Y I++DEAHERTLATD+L GLLK++L RP LKL++ SAT+ A+KF +F Sbjct: 331 FLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFF 390 Query: 770 SGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPA-GDILVFLTGEEEIED 946 P+ VPGR +PV+I YT +PE +Y+ AAI T+ QIH + GDILVFLTG+EEIE Sbjct: 391 DNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIER 450 Query: 947 ACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNI 1126 K+ + ++ +G + + + P+Y+ LP Q KIF P P RK+V++TNI Sbjct: 451 TKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENC-------RKVVLATNI 503 Query: 1127 AETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFR 1306 AETSLTIDGI YVIDPGF K+ Y P + LL P S+AS QRAGRAGR PGKCFR Sbjct: 504 AETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFR 563 Query: 1307 LYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVL 1486 ++T+ S+ +L+ PEI R+NL+NTVL L LG+ DL+ F MD P+ TL ++LE L Sbjct: 564 IFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENL 623 Query: 1487 NYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRY-NCS---NEILSISAML 1639 LGAL+ +G +T LG+MM EFP +P+ +K+L + + C E L+I +ML Sbjct: 624 YILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSML 678 Score = 67.4 bits (163), Expect = 3e-10 Identities = 43/173 (24%), Positives = 84/173 (48%), Gaps = 17/173 (9%) Frame = +1 Query: 2056 DEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMKSADNVRQQLVRIMTR 2235 D A + ++ DH+ L +++ ++ + +WC ++ + + M N+R QL R + Sbjct: 691 DAAASVLSEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTMLRVRNIRNQLFRCSEK 750 Query: 2236 FNL----KMCSTDFNSREYYVNIR--KAMLSGYFMQVAHLERTGHYLTVKDN--QVVHLH 2391 L + Y+N R + +SG+ M + L TG+ + + V +H Sbjct: 751 VGLVEKNDQARMKIGNIAGYINARITRCFISGFPMNIVQLGPTGYQTMGRSSGGLNVSVH 810 Query: 2392 PSNCM--DHK------PEWVIYNEYVLTTRNFIRTVTDI-RGEWLIDIAPQYY 2523 P++ + +HK ++V+Y + +LT++ FIR I + EWLID+ PQ + Sbjct: 811 PTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLVIPKEEWLIDMVPQIF 863
>Q03319:PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 - Schizosaccharomyces pombe| (Fission yeast) Length = 719 Score = 422 bits (1085), Expect = e-117 Identities = 216/465 (46%), Positives = 312/465 (67%) Frame = +2 Query: 248 EILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVAC 427 +ILE+R+ LP+W+ D + ++DN+ +++VGETGSGK+TQIPQF+ E + VA Sbjct: 88 DILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECP-YAQEGCVAI 146 Query: 428 TQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPL 607 TQP E +GE+VGYSIRF+D +S KT +KYLTDGMLLRE + DP+ Sbjct: 147 TQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPI 206 Query: 608 LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLM 787 L +Y ++LDEAHERTL TD+L G +K+++K RP L++++MSATL AE+F +F GA + Sbjct: 207 LSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGAEIC 266 Query: 788 KVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINK 967 + GR +PV+I YT PE DYL+A +RT+ Q+H P GDILVFLTG++EIE I Sbjct: 267 YISGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIEALEALIKS 326 Query: 968 EVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTI 1147 + + ++ PL+++LP Q ++F PA RK+V+STNIAETS+TI Sbjct: 327 YSKQLPSNLPQIQACPLFASLPQEQQLQVFLPAL-------ANHRKVVLSTNIAETSVTI 379 Query: 1148 DGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSF 1327 GI YVID G +K K +N ++ +ESL V PIS+++A QR+GRAGR G+C+R+YTE F Sbjct: 380 SGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADF 439 Query: 1328 NGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD 1507 + L +T PEI R +L+ VLTLK G +D+++F +MDPP+ E L+RALE L +GALD Sbjct: 440 D-KLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALD 498 Query: 1508 DEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 D G++ LG MS PL P +++ ++ + +NC +E++ + + LS Sbjct: 499 DNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLS 543 Score = 108 bits (271), Expect = 1e-22 Identities = 63/178 (35%), Positives = 101/178 (56%), Gaps = 4/178 (2%) Frame = +1 Query: 1999 ILCL-VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPT--WCYENF 2169 + CL + FL P+E + A EA+ +F H +GD LT LN Y +++ D WC +NF Sbjct: 539 VSCLSTDSMFLFPQEKRDEAIEARLKFLHSEGDLLTCLNALRQYLESSHDSRKQWCSQNF 598 Query: 2170 VNARAMKSADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTG 2349 +N RA+K+ ++R+QL + ++ S+ + E N+ + LSGY A L G Sbjct: 599 INRRALKTILDIRKQLREHCLKDGWELNSSPEVNSE---NLLLSFLSGYITNTALLHPDG 655 Query: 2350 HYLTVKDNQVVHLHPSNCM-DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQY 2520 Y T+ NQ + +HPS+ + K E ++Y+E V TT++++R V+ IR WL +AP Y Sbjct: 656 SYRTIIGNQTISIHPSSSLFGKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAVAPHY 713
>Q5RBD4:DHX35_PONPY Probable ATP-dependent RNA helicase DHX35 - Pongo pygmaeus| (Orangutan) Length = 720 Score = 419 bits (1077), Expect = e-116 Identities = 226/485 (46%), Positives = 322/485 (66%), Gaps = 14/485 (2%) Frame = +2 Query: 227 PYSARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLS 406 PY+A L I ++R+ LPV++ ++ L ++ + QT+++VGETG GK+TQIPQ++ EA + Sbjct: 41 PYAA--LSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTA 98 Query: 407 NRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSH-KTVLKYLTDGMLL 583 +V TQP EE +G EVGY IRF+DC+ T +K+LTDGML+ Sbjct: 99 EGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLV 158 Query: 584 REAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 763 RE M DPLL +Y VI+LDEAHERTL TD+ GLLK++ K R DL+L+V SATL+A+KF+ Sbjct: 159 REMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRD 218 Query: 764 YFSG----------APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDIL 913 +F+ ++ V GR PV+IFY Q P DY+++ + TVV+IH E GDIL Sbjct: 219 FFNQNETSDPARDTCVILTVGGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDIL 278 Query: 914 VFLTGEEEIEDACRKINKEVNNMG--DQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEG 1087 FLTG+EE+E + ++ + ++V+P+Y+ LP Q K+F+ + Sbjct: 279 AFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSV--- 335 Query: 1088 GPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRA 1267 RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V P+S+ASA+QRA Sbjct: 336 ----RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRA 391 Query: 1268 GRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 1447 GR GR++ GKC+RLYTE++F+ L T PE+ RSNLA +L LK LGID+++ F FM P Sbjct: 392 GRGGRSRSGKCYRLYTEEAFD-KLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSP 450 Query: 1448 PAPETLMRALEVLNYLGALDDEGNLTS-LGEMMSEFPLDPQMSKMLVISPRYNCSNEILS 1624 P +++++ALE+L LG LD + LT LG ++EFPL+P +KML+ S + CS EILS Sbjct: 451 PPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILS 510 Query: 1625 ISAML 1639 I+AM+ Sbjct: 511 IAAMM 515 Score = 127 bits (318), Expect = 4e-28 Identities = 61/188 (32%), Positives = 109/188 (57%), Gaps = 7/188 (3%) Frame = +1 Query: 1981 FVCYYHILCL-----VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNED 2145 F C IL + + N F+ P + A +F +GDHLT+LNVY A+ ++N++ Sbjct: 502 FGCSQEILSIAAMMQIQNIFVVPPNQKSQAIRVHRKFAVEEGDHLTMLNVYEAFIKHNKN 561 Query: 2146 PTWCYENFVNARAMKSADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQ 2325 WC E+F+N + + A VR+QL +++ +F + S++ + + + ++SG+F Sbjct: 562 SQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSEGDPDP----VLRCIVSGFFAN 617 Query: 2326 VAHLERTGHYLTVKDNQVVHLHPSNCM--DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWL 2499 A TG Y T++D+ +H+HP++ + + P WVIYNE + T++ ++R VT I WL Sbjct: 618 AARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWL 677 Query: 2500 IDIAPQYY 2523 +++AP +Y Sbjct: 678 LELAPHFY 685
>Q9H5Z1:DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 - Homo sapiens (Human)| Length = 703 Score = 419 bits (1077), Expect = e-116 Identities = 225/485 (46%), Positives = 322/485 (66%), Gaps = 14/485 (2%) Frame = +2 Query: 227 PYSARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLS 406 PY+A L I ++R+ LPV++ ++ L ++ + QT+++VGETG GK+TQIPQ++ EA + Sbjct: 41 PYAA--LSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTA 98 Query: 407 NRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSH-KTVLKYLTDGMLL 583 +V TQP EE +G EVGY IRF+DC+ T +K+LTDGML+ Sbjct: 99 EGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLV 158 Query: 584 REAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 763 RE M DPLL +Y VI+LDEAHERTL TD+ GLLK++ K R DL+L+V SATL+A+KF+ Sbjct: 159 REMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRD 218 Query: 764 YFSG----------APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDIL 913 +F+ ++ V GR PV+IFY Q P DY+++ + TVV+IH E GD+L Sbjct: 219 FFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVL 278 Query: 914 VFLTGEEEIEDACRKINKEVNNMG--DQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEG 1087 FLTG+EE+E + ++ + ++V+P+Y+ LP Q K+F+ + Sbjct: 279 AFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSV--- 335 Query: 1088 GPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRA 1267 RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V P+S+ASA+QRA Sbjct: 336 ----RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRA 391 Query: 1268 GRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 1447 GR GR++ GKC+RLYTE++F+ L T PE+ RSNLA +L LK LGID+++ F FM P Sbjct: 392 GRGGRSRSGKCYRLYTEEAFD-KLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSP 450 Query: 1448 PAPETLMRALEVLNYLGALDDEGNLTS-LGEMMSEFPLDPQMSKMLVISPRYNCSNEILS 1624 P +++++ALE+L LG LD + LT LG ++EFPL+P +KML+ S + CS EILS Sbjct: 451 PPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILS 510 Query: 1625 ISAML 1639 I+AM+ Sbjct: 511 IAAMM 515 Score = 131 bits (329), Expect = 2e-29 Identities = 65/200 (32%), Positives = 114/200 (57%), Gaps = 7/200 (3%) Frame = +1 Query: 1981 FVCYYHILCL-----VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNED 2145 F C IL + + N F+ P + A +F +GDHLT+LN+Y A+ ++N+D Sbjct: 502 FGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKD 561 Query: 2146 PTWCYENFVNARAMKSADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQ 2325 WC E+F+N + + A VR+QL +++ +F + S++ + + + ++SG+F Sbjct: 562 SKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPD----LVLRCIVSGFFAN 617 Query: 2326 VAHLERTGHYLTVKDNQVVHLHPSNCM--DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWL 2499 A TG Y T++D+ +H+HP++ + + P WVIYNE + T++ ++R VT I WL Sbjct: 618 AARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWL 677 Query: 2500 IDIAPQYYDLTNFPSCEAKR 2559 +++AP +Y S +AKR Sbjct: 678 LELAPHFYQQGTHLSLKAKR 697
>P15938:PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 -| Saccharomyces cerevisiae (Baker's yeast) Length = 1071 Score = 411 bits (1056), Expect = e-114 Identities = 218/480 (45%), Positives = 320/480 (66%), Gaps = 15/480 (3%) Frame = +2 Query: 248 EILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNR--SMV 421 +I + LPV++ + + L ++R+NQ ++++GETGSGKTTQ+ Q++ E EG +N + Sbjct: 342 DIKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYE-EGYANDRGKSI 400 Query: 422 ACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCS-SHKTVLKYLTDGMLLREAMA 598 TQP EM V +G+EVGYSIRFED + S T LK++TDG+LLRE + Sbjct: 401 VVTQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLL 460 Query: 599 DPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGA 778 D L++Y +++DEAHER+L TD+L G K +L R DLKL++ SAT+ A+KF +F A Sbjct: 461 DDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNA 520 Query: 779 PLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP--AGDILVFLTGEEEIEDAC 952 P +PGR PV+ YT P +DY+EAA+ V+IH+ +GDIL+F+TG+E+IE Sbjct: 521 PQFTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTF 580 Query: 953 RKINKEVNNMG---------DQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRK 1105 + ++ + +++ ++++P+YS LP +Q KIF ++ RK Sbjct: 581 DTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIF-------QDLHGTKRK 633 Query: 1106 IVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRT 1285 I+++TNIAETSLTI GI YVID G+SK KVYNP+I ++SL+++PISKA+A QR+GRAGRT Sbjct: 634 IIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRT 693 Query: 1286 QPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGI-DDLVHFDFMDPPAPET 1462 PG +RLYTE +F D+ QT PEI R+NL+NT+L LK L + D+L F F+D P +T Sbjct: 694 APGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQT 753 Query: 1463 LMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 + +L L ++GA+D G LT LG M++FPL P +SK+L+I+ R CS+E+L+I +MLS Sbjct: 754 FLSSLYELWFIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLS 813 Score = 103 bits (256), Expect = 5e-21 Identities = 57/176 (32%), Positives = 98/176 (55%), Gaps = 3/176 (1%) Frame = +1 Query: 2011 VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMK 2190 VP F RP+E QK AD A+ +F DHLTLLNV+ ++ NN WC ++FV +++ Sbjct: 814 VPQVFYRPKERQKEADIARNKFFIAKSDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLV 873 Query: 2191 SADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKD 2370 A ++R QL+ I+ + + S S + + I+K + SG+ Q A + +Y+ +K Sbjct: 874 RARDIRDQLLTILKSQKIPVIS----SGKDWDIIKKCICSGFAHQAAKITGLRNYVHLKT 929 Query: 2371 NQVVHLHPSNC---MDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYYDL 2529 V LHP++ + P +V+Y+E ++T++ +I VT + WL++ YD+ Sbjct: 930 GVSVQLHPTSALHGLGDLPPYVVYHELLMTSKEYICCVTSVDPFWLMEYGGLLYDI 985
>Q9H6R0:DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 - Homo sapiens (Human)| Length = 707 Score = 406 bits (1043), Expect = e-112 Identities = 217/484 (44%), Positives = 318/484 (65%), Gaps = 11/484 (2%) Frame = +2 Query: 224 RPYSARYLEILE-KRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEG 400 +P ++ Y E +E +RR+LP+ Q + + L LR+ +L+GETGSGKTTQIPQ++ E G Sbjct: 57 QPSASPYPEAVELQRRSLPILQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEG-G 115 Query: 401 LSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGML 580 +S + ++A TQP +E +G+ VGY++RF+D +S T +K+LTDGML Sbjct: 116 ISRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTGIKFLTDGML 175 Query: 581 LREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD-----LKLVVMSATLE 745 LREA++D LL +Y ++LDEAHERT+ TDVLFG++K K R + LK++VMSAT++ Sbjct: 176 LREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMD 235 Query: 746 AEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAG-DILVFL 922 + F YF+GAP++ + GR HP+++FYT++P+ DYL AA+ +V QIH P+ DILVFL Sbjct: 236 VDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFL 295 Query: 923 TGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAG- 1099 TG+EEIE + ++ D + V+PLY++LP A Q ++F +G P G Sbjct: 296 TGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVF--------QGAPKGY 347 Query: 1100 RKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAG 1279 RK+++STNIAETS+TI GI YV+D G K K YNP +E L V +SK A QR GRAG Sbjct: 348 RKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAG 407 Query: 1280 RTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 1459 R G C+RLYTE F T PEI R NLA+ +L L + + +++ FDFM P+P+ Sbjct: 408 REDSGICYRLYTEDEFE-KFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPD 466 Query: 1460 TLMRALEVLNYLGAL---DDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSIS 1630 + A+ L+ LGAL DD+ LT +G M+ FPL+P+ +K +++SP+++C+ EIL+I Sbjct: 467 HIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIV 526 Query: 1631 AMLS 1642 ++LS Sbjct: 527 SLLS 530 Score = 103 bits (257), Expect = 4e-21 Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 1/175 (0%) Frame = +1 Query: 2002 LCLVPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNAR 2181 L V + P ++ + +F +GDH+TLLN+Y +K + WC ENFVN++ Sbjct: 528 LLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSK 587 Query: 2182 AMKSADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLT 2361 M VR QL I + ++ + S SR ++R+ + FM A L+ G Y T Sbjct: 588 NMTLVAEVRAQLRDICLKMSMPIAS----SRGDVESVRRCLAHSLFMSTAELQPDGTYAT 643 Query: 2362 VKDNQVVHLHPSNCMDH-KPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYY 2523 +Q V +HPS+ + H KP V+Y E + T + ++R + I +WL + AP+Y+ Sbjct: 644 TDTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYF 698
>Q80VY9:DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 - Mus musculus (Mouse)| Length = 698 Score = 404 bits (1038), Expect = e-111 Identities = 217/484 (44%), Positives = 319/484 (65%), Gaps = 11/484 (2%) Frame = +2 Query: 224 RPYSARYLEILE-KRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEG 400 +P ++ Y E LE +RR+LP+++ + + L LR+ +L+GETGSGKTTQIPQ++ E G Sbjct: 48 QPSASPYREALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEG-G 106 Query: 401 LSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGML 580 +S + ++A TQP +E +G+ VGY++RFED +S T +K+LTDGML Sbjct: 107 ISRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGML 166 Query: 581 LREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD-----LKLVVMSATLE 745 LREA++D LL +Y ++LDEAHERT+ TDVLFG++K K R + LK++VMSAT++ Sbjct: 167 LREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMD 226 Query: 746 AEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAG-DILVFL 922 + F YF+ AP++ + GR HP++IFYT++P++DYL AA+ +V QIH PA DILVFL Sbjct: 227 VDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQDILVFL 286 Query: 923 TGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAG- 1099 TG+EEIE + ++ D + V+PLY++LP + Q ++F +G P G Sbjct: 287 TGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVF--------QGAPKGY 338 Query: 1100 RKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAG 1279 RK+++STNIAETS+TI GI YV+D G K K YNP +E L V +SK A QR GRAG Sbjct: 339 RKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAG 398 Query: 1280 RTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 1459 R G C+RLYTE F + T PEI R NLA+ +L L + + +++ FDFM P+P+ Sbjct: 399 REDSGICYRLYTEDEFE-KFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPD 457 Query: 1460 TLMRALEVLNYLGAL---DDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSIS 1630 + A+ L+ LGAL DD+ LT +G M+ FPL+P+ +K +++S +++C+ EIL+I Sbjct: 458 HIEAAIAQLDLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIV 517 Query: 1631 AMLS 1642 ++LS Sbjct: 518 SLLS 521 Score = 104 bits (259), Expect = 2e-21 Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 1/175 (0%) Frame = +1 Query: 2002 LCLVPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNAR 2181 L V + P + + +F +GDH+TLLN+Y +K + WC ENFVN++ Sbjct: 519 LLSVDSVLYNPPARRDEVQSVRKKFISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSK 578 Query: 2182 AMKSADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLT 2361 M VR QL I LKM +SR ++R+ M FM A L+ G Y T Sbjct: 579 NMLLVAEVRAQLREIC----LKMSMPIMSSRGDMESVRRCMAHSLFMNTAELQTDGTYAT 634 Query: 2362 VKDNQVVHLHPSNCMDH-KPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYY 2523 +Q V +HPS+ + H KP V+Y + T + ++R + + EWL + AP Y+ Sbjct: 635 TDTHQPVAIHPSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYF 689
>Q9BKQ8:DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog - Caenorhabditis| elegans Length = 732 Score = 386 bits (992), Expect = e-106 Identities = 209/485 (43%), Positives = 302/485 (62%), Gaps = 11/485 (2%) Frame = +2 Query: 218 NGRPYSARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAE 397 + PY++ L I ++R LP+++ + L + +T+I+VGETG GK+TQ+PQF+LEA Sbjct: 61 HNNPYAS--LNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAG 118 Query: 398 GLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGM 577 ++ + TQP EE D +G +VGY++RF+D S T +K++TDG+ Sbjct: 119 WAADGRQIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGL 178 Query: 578 LLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 757 LLRE +ADPLL +Y +I++DEAHER+ TD+L GLL+++++ R DL+++V SATL+AE F Sbjct: 179 LLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELF 238 Query: 758 QGYF----------SGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGD 907 + +F A ++ V GR HPV + +T+ DY ++A+ TV+ IH E GD Sbjct: 239 KDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGD 298 Query: 908 ILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEG 1087 ILVFLTG++E+ED C K+ + N+ + VVP Y LP Q K FD P Sbjct: 299 ILVFLTGQDEVEDVCEKLRELAGNL-KNCDRLWVVPCYGALPAREQMKAFDSTP------ 351 Query: 1088 GPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRA 1267 RK+VV+TNIAE S+TI GI YVID G+ K + + VE+L+ +SKASA QRA Sbjct: 352 -HGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRA 410 Query: 1268 GRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 1447 GRAGR +PGKC+RLY E F T PEI R +A+T+L LK LG+ ++ F ++ P Sbjct: 411 GRAGRIRPGKCYRLYPESEFE-RFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSP 469 Query: 1448 PAPETLMRALEVLNYLGALDDEGNLTS-LGEMMSEFPLDPQMSKMLVISPRYNCSNEILS 1624 P ++ LE+L LGA+D+ LTS LG M+EFPL P SK L+ S + CS E+++ Sbjct: 470 PPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVT 529 Query: 1625 ISAML 1639 I AM+ Sbjct: 530 IVAMM 534 Score = 122 bits (307), Expect = 7e-27 Identities = 66/189 (34%), Positives = 108/189 (57%), Gaps = 5/189 (2%) Frame = +1 Query: 2011 VPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMK 2190 + + F+ P + AD + +F +GDH+T+LNV+ + +N WC ++FVN R + Sbjct: 536 IQDVFITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLM 595 Query: 2191 SADNVRQQLVRIMTRFNLKMCSTD--FNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTV 2364 ADNVR QLVR++ RF ++ S+ N E NIR+ +++G+F Q A TG Y+TV Sbjct: 596 RADNVRSQLVRLLKRFEIEKVSSRGLINCSE---NIRQCLVTGFFSQAAQYHYTGKYMTV 652 Query: 2365 KDNQVVHLHPSNCMDHK---PEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYYDLTN 2535 K++ +++ + + K P+WVI+ E + ++ IR VT I EWL ++AP YY+ Sbjct: 653 KESFPFNMYKGSSIMFKKDYPKWVIFTEVM---QDSIRDVTVIEPEWLYELAPHYYEFGT 709 Query: 2536 FPSCEAKRV 2562 KR+ Sbjct: 710 EGELAEKRM 718
>Q5XI69:DHX40_RAT Probable ATP-dependent RNA helicase DHX40 - Rattus norvegicus (Rat)| Length = 779 Score = 382 bits (980), Expect = e-105 Identities = 205/476 (43%), Positives = 299/476 (62%), Gaps = 18/476 (3%) Frame = +2 Query: 269 TLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVACTQPXXXX 448 T P+ +Q+ + ++ +RDN LI+ G TGSGKTTQ+P+++ EA G S M+ TQP Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA-GFSQHGMIGVTQPRKVA 110 Query: 449 XXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPLLERYKVI 628 EEM T+G +VGY +RF+DCSS +T +KY+TDG LL+ + DP L ++ VI Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVI 170 Query: 629 VLDEAHERTLATDVLFGLLKEVLKNRPD-----LKLVVMSATLEAEKFQGYFSGAPLMKV 793 +LDEAHERTL TD+LFGLLK++ +++ LK+VVMSAT+E K +F P+ + Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDI 230 Query: 794 PGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACR 955 PGRL+PV E F RD Y++A ++ + IH+ E AGDILVFLTG+ EIE +C Sbjct: 231 PGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCE 290 Query: 956 -------KINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVV 1114 ++ + + + + ++P Y ++ Q++IF P PP + RK V+ Sbjct: 291 LLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGI-------RKCVI 343 Query: 1115 STNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPG 1294 STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QR+GRAGRT G Sbjct: 344 STNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASG 403 Query: 1295 KCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 1474 KCFR+Y++ +N + PEI R++L + VLTLK L I D++ F ++DPP ++ A Sbjct: 404 KCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEA 463 Query: 1475 LEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 L+ L A+D G++T LG M EFPL P ++ ++ + +C + +L I+AMLS Sbjct: 464 LKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLS 519 Score = 79.3 bits (194), Expect = 8e-14 Identities = 52/187 (27%), Positives = 97/187 (51%), Gaps = 14/187 (7%) Frame = +1 Query: 2011 VPNCFLRP------REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFV 2172 V N F+RP +EA++ E A+ G + D TL ++ K + +WC ++++ Sbjct: 520 VENVFIRPVDPEYQKEAEQKHRELAAKAGGFN-DFATLAVIFEQCKSSGAPASWCQKHWI 578 Query: 2173 NARAMKSADNVRQQLVRIMTRFNLKMCSTDFNSREY----YVNIRKAMLSGYFMQVAHLE 2340 + R + SA V QL ++ + + +DF + + +R+ + +GYF VA Sbjct: 579 HWRCLFSAFRVEAQLRELIRKLKQQ---SDFPRETFEGPKHEVLRRCLCAGYFKNVARRS 635 Query: 2341 RTGHYLTVKDN-QVVHLHPSNCM---DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDI 2508 + T+ VH+HPS+ + + K EW+I++E ++TT+ + R V IR EW+ D+ Sbjct: 636 VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDL 695 Query: 2509 APQYYDL 2529 P+ ++L Sbjct: 696 LPKLHEL 702
>Q8IX18:DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 - Homo sapiens (Human)| Length = 779 Score = 382 bits (980), Expect = e-105 Identities = 207/476 (43%), Positives = 300/476 (63%), Gaps = 18/476 (3%) Frame = +2 Query: 269 TLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVACTQPXXXX 448 T P+ +Q+ + ++ +RDN LI+ G TGSGKTTQ+P+++ EA G S M+ TQP Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA-GFSQHGMIGVTQPRKVA 110 Query: 449 XXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPLLERYKVI 628 EEM T+G +VGY +RF+DCSS +T +KY+TDG LL+ + DP L ++ VI Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 170 Query: 629 VLDEAHERTLATDVLFGLLKEVLK----NRPD-LKLVVMSATLEAEKFQGYFSGAPLMKV 793 +LDEAHERTL TD+LFGLLK++ + NR + LK+VVMSAT+E K +F P+ + Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDI 230 Query: 794 PGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACR 955 PGRL+PV E F RD Y++A ++ + IH+ E AGDILVFLTG+ EIE +C Sbjct: 231 PGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCE 290 Query: 956 -------KINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVV 1114 ++ + + + + ++P Y ++ Q++IF P PP + RK V+ Sbjct: 291 LLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGI-------RKCVI 343 Query: 1115 STNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPG 1294 STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QR+GRAGRT G Sbjct: 344 STNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSG 403 Query: 1295 KCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 1474 KCFR+Y++ +N + PEI R++L + VLTLK L I D++ F ++DPP ++ A Sbjct: 404 KCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEA 463 Query: 1475 LEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 L+ L A+D G++T LG M EFPL P ++ ++ + +C + +L I+AMLS Sbjct: 464 LKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLS 519 Score = 78.2 bits (191), Expect = 2e-13 Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 14/186 (7%) Frame = +1 Query: 2011 VPNCFLRP------REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFV 2172 V N F+RP +EA++ E A+ G + D TL ++ K + +WC ++++ Sbjct: 520 VENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAVIFEQCKSSGAPASWCQKHWI 578 Query: 2173 NARAMKSADNVRQQLVRIMTRFNLKMCSTDFNSREY----YVNIRKAMLSGYFMQVAHLE 2340 + R + SA V QL ++ + + +DF + + +R+ + +GYF VA Sbjct: 579 HWRCLFSAFRVEAQLRELIRKLKQQ---SDFPKETFEGPKHEVLRRCLCAGYFKNVARRS 635 Query: 2341 RTGHYLTVKDN-QVVHLHPSNCM---DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDI 2508 + T+ VH+HPS+ + + K EW+I++E ++TT+ + R V IR EW+ D+ Sbjct: 636 VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDL 695 Query: 2509 APQYYD 2526 P+ ++ Sbjct: 696 LPKLHE 701
>Q5R864:DHX40_PONPY Probable ATP-dependent RNA helicase DHX40 - Pongo pygmaeus| (Orangutan) Length = 779 Score = 381 bits (979), Expect = e-105 Identities = 207/476 (43%), Positives = 300/476 (63%), Gaps = 18/476 (3%) Frame = +2 Query: 269 TLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVACTQPXXXX 448 T P+ +Q+ + ++ +RDN LI+ G TGSGKTTQ+P+++ EA G S M+ TQP Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA-GFSQHGMIGVTQPRKVA 110 Query: 449 XXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPLLERYKVI 628 EEM T+G +VGY +RF+DCSS +T +KY+TDG LL+ + DP L ++ VI Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 170 Query: 629 VLDEAHERTLATDVLFGLLKEVLK----NRPD-LKLVVMSATLEAEKFQGYFSGAPLMKV 793 +LDEAHERTL TD+LFGLLK++ + NR + LK+VVMSAT+E K +F P+ + Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDI 230 Query: 794 PGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACR 955 PGRL+PV E F RD Y++A ++ + IH+ E AGDILVFLTG+ EIE +C Sbjct: 231 PGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCE 290 Query: 956 -------KINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVV 1114 ++ + + + + ++P Y ++ Q++IF P PP + RK V+ Sbjct: 291 LLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGI-------RKCVI 343 Query: 1115 STNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPG 1294 STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QR+GRAGRT G Sbjct: 344 STNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASG 403 Query: 1295 KCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 1474 KCFR+Y++ +N + PEI R++L + VLTLK L I D++ F ++DPP ++ A Sbjct: 404 KCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEA 463 Query: 1475 LEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 L+ L A+D G++T LG M EFPL P ++ ++ + +C + +L I+AMLS Sbjct: 464 LKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLS 519 Score = 77.4 bits (189), Expect = 3e-13 Identities = 50/186 (26%), Positives = 96/186 (51%), Gaps = 14/186 (7%) Frame = +1 Query: 2011 VPNCFLRP------REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFV 2172 V N F+RP +EA++ E A+ G + D TL ++ K + +WC ++++ Sbjct: 520 VENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAVIFEQCKSSGAPASWCQKHWI 578 Query: 2173 NARAMKSADNVRQQLVRIMTRFNLKMCSTDFNSREY----YVNIRKAMLSGYFMQVAHLE 2340 + R + SA V QL ++ + + +DF + + +R+ + +GYF VA Sbjct: 579 HWRCLFSAFRVEAQLRELIRKLKQQ---SDFPRETFEGPKHEVLRRCLCAGYFKNVARRS 635 Query: 2341 RTGHYLTVKDN-QVVHLHPSNCM---DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDI 2508 + T+ VH+HPS+ + + K EW++++E ++TT+ + R V IR EW+ D+ Sbjct: 636 VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIVFHEVLVTTKVYARIVCPIRYEWVRDL 695 Query: 2509 APQYYD 2526 P+ ++ Sbjct: 696 LPKLHE 701
>Q6PE54:DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 - Mus musculus (Mouse)| Length = 779 Score = 380 bits (977), Expect = e-104 Identities = 204/476 (42%), Positives = 300/476 (63%), Gaps = 18/476 (3%) Frame = +2 Query: 269 TLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVACTQPXXXX 448 T P+ +Q+ + ++ +RDN LI+ G TGSGKTTQ+P+++ EA G S M+ TQP Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA-GFSQHGMIGVTQPRKVA 110 Query: 449 XXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPLLERYKVI 628 EEM T+G +VGY +RF+DCSS +T +KY+TDG LL+ + DP L ++ VI Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVI 170 Query: 629 VLDEAHERTLATDVLFGLLKEVLKNRPD-----LKLVVMSATLEAEKFQGYFSGAPLMKV 793 +LDEAHERTL TD+LFGLLK++ +++ LK+VVMSAT+E K +F P+ + Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDI 230 Query: 794 PGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACR 955 PGRL+PV E F RD Y++A ++ + IH+ E AGDILVFLTG+ EIE +C Sbjct: 231 PGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCE 290 Query: 956 -------KINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVV 1114 ++ + + + + ++P Y ++ Q++IF P PP + RK V+ Sbjct: 291 LLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGI-------RKCVI 343 Query: 1115 STNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPG 1294 STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QR+GRAGRT G Sbjct: 344 STNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASG 403 Query: 1295 KCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 1474 KCFR+Y+++ ++ + PEI R++L + VLTLK L I D++ F ++DPP ++ A Sbjct: 404 KCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEA 463 Query: 1475 LEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 L+ L A+D G++T LG M EFPL P ++ ++ + +C + +L I+AMLS Sbjct: 464 LKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLS 519 Score = 79.3 bits (194), Expect = 8e-14 Identities = 52/187 (27%), Positives = 97/187 (51%), Gaps = 14/187 (7%) Frame = +1 Query: 2011 VPNCFLRP------REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFV 2172 V N F+RP +EA++ E A+ G + D TL ++ K + +WC ++++ Sbjct: 520 VENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAVIFEQCKSSGAPASWCQKHWI 578 Query: 2173 NARAMKSADNVRQQLVRIMTRFNLKMCSTDFNSREY----YVNIRKAMLSGYFMQVAHLE 2340 + R + SA V QL ++ + + +DF + + +R+ + +GYF VA Sbjct: 579 HWRCLFSAFRVEAQLRELIRKLKQQ---SDFPRETFEGPKHEVLRRCLCAGYFKNVARRS 635 Query: 2341 RTGHYLTVKDN-QVVHLHPSNCM---DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDI 2508 + T+ VH+HPS+ + + K EW+I++E ++TT+ + R V IR EW+ D+ Sbjct: 636 VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDL 695 Query: 2509 APQYYDL 2529 P+ ++L Sbjct: 696 LPKLHEL 702
>P36009:DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 - Saccharomyces cerevisiae| (Baker's yeast) Length = 735 Score = 371 bits (952), Expect = e-101 Identities = 218/539 (40%), Positives = 322/539 (59%), Gaps = 12/539 (2%) Frame = +2 Query: 62 ATSLAAAMGTERKRKV--SLFDVVDKTSV--SSKLGRAGINGXXXXXXXNPSINRWNGRP 229 + S A+ T +K+KV ++ + T + +SK+ + +G S N+ N Sbjct: 5 SNSRVASNHTSKKQKVRRNIHPFTNNTRIKRASKIVKFNDSGEGDHVSDQRS-NKENVLT 63 Query: 230 YSA---RYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEA-E 397 Y + R ++L+ R TLPV+Q K E + + N +L+GETGSGK+TQIPQFVLE Sbjct: 64 YKSLKSRASDLLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLY 123 Query: 398 GLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGM 577 +A TQP +E +GE+VGYS+RF++ ++ +T LKYLTDGM Sbjct: 124 DTKKHGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGM 183 Query: 578 LLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKN-RPDLKLVVMSATLEAEK 754 LLRE M + L Y VIV+DEAHERT+ TD++ G LK +++ RPDL+++VMSATL+AEK Sbjct: 184 LLRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEK 243 Query: 755 FQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEE 934 F +F+ AP++ V GR V+ +Y + P D ++A IR +QI+ E GDIL FL G+E Sbjct: 244 FSEFFNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFLPGQE 303 Query: 935 EIEDACRKINKEVNNMGDQVGPVKVV---PLYSTLPPAMQQKIFDPAPPPLKEGGPAGRK 1105 EI+ A + K + D+ PV ++ PLY+ LP Q +F P RK Sbjct: 304 EIDKAVTIMEKIAKYVSDE-APVPLIVPYPLYAALPAVQQSLVFAPIK-------GFKRK 355 Query: 1106 IVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRT 1285 +V STNIAETS+TI G+ +V+D G K KV+ ++ + +LL PIS+ASA QR+GRAGR Sbjct: 356 VVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRE 415 Query: 1286 QPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETL 1465 GK FRLY E + L Q+ PEI RS++ + VL LK+ G+DDL+++ + + P E + Sbjct: 416 SEGKSFRLYCESDY-VKLPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAI 474 Query: 1466 MRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 + L+ L LGALD G +T G+ M+ PL P +S +L+ + C ++++ I + LS Sbjct: 475 VMGLQELYELGALDTRGKITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLS 533 Score = 53.1 bits (126), Expect = 6e-06 Identities = 50/193 (25%), Positives = 77/193 (39%), Gaps = 23/193 (11%) Frame = +1 Query: 1999 ILCL-VPNCFLRPREAQKAADEAKAR------FGHIDGDHLTLLNVYHAY--------KQ 2133 + CL V N L P ++ DE R G GD + L ++ Y Sbjct: 529 VSCLSVENLLLNPSPEER--DEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDA 586 Query: 2134 NNEDPTWCYENFVNARAMKSADNVRQQLVRIMTRFNLKMCSTDFNSR------EYYVNIR 2295 ++E WC ++ R K+ VR QL R + D S+ E I Sbjct: 587 SSERNDWCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGEDGELISKIL 646 Query: 2296 KAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC--MDHKPEWVIYNEYVLTTRNFIR 2469 K L+G+ A Y TV + + +HPS+ M+ ++Y EYV TT+ + R Sbjct: 647 KCFLTGFIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKSCPGIMYTEYVFTTKGYAR 706 Query: 2470 TVTDIRGEWLIDI 2508 V+ I WL ++ Sbjct: 707 NVSRIELSWLQEV 719
>Q7L7V1:DHX32_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 -| Homo sapiens (Human) Length = 743 Score = 370 bits (949), Expect = e-101 Identities = 200/482 (41%), Positives = 303/482 (62%), Gaps = 3/482 (0%) Frame = +2 Query: 206 INRWNGRPYSARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFV 385 +N ++G PYS+RY ++L++R LP+W++K F+ L NQ +I+ G+ GK+ Q+PQ+ Sbjct: 40 LNPFDGLPYSSRYYKLLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWC 99 Query: 386 LEAEGLS---NRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVL 556 E LS V CTQ +EMDV IG EVGY I FE+C +++T+L Sbjct: 100 AEY-CLSIHYQHGGVICTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETIL 158 Query: 557 KYLTDGMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 736 +Y TD ML RE M++P L Y VI+LD+ HER++ATDVL GLLK+VL RP+LKL++ S+ Sbjct: 159 RYCTDDMLQREMMSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSS 218 Query: 737 TLEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILV 916 K Y+ P+++V + HPVE+ Y E ++D E+ +R + +IH GDI+V Sbjct: 219 PHLISKLNSYYGNVPVIEVKNK-HPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVV 277 Query: 917 FLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPA 1096 FL E++IE C + + +N+ +G + VVPLY P + +F P K Sbjct: 278 FLACEQDIEKVCETVYQG-SNLNPDLGELVVVPLY----PKEKCSLFKPLDETEKRCQVY 332 Query: 1097 GRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRA 1276 R++V++T+ E + + + +VID G ++KVYNPRIR SL++ PIS++ A R Sbjct: 333 QRRVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQIL 392 Query: 1277 GRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 1456 G + GK F LYTE+ + D+ P E+ +NL + VL +K++ I L H DFM+ PAP Sbjct: 393 GSSSSGKFFCLYTEEFASKDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRPAP 452 Query: 1457 ETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAM 1636 E+LM+ALE L+YL ALD++GNL+ G +MSEFPLDPQ+SK ++ S ++C +E+L+I+AM Sbjct: 453 ESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAM 512 Query: 1637 LS 1642 ++ Sbjct: 513 VT 514 Score = 134 bits (337), Expect = 2e-30 Identities = 71/199 (35%), Positives = 117/199 (58%), Gaps = 12/199 (6%) Frame = +1 Query: 2014 PNCFLR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPT-------WCYENF 2169 PNCF P A++AA F H +GDH TL+++Y AY+ + + WC + F Sbjct: 516 PNCFSHVPHGAEEAALTCWKTFLHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYF 575 Query: 2170 VNARAMKSADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAH-LERT 2346 +N A++ AD +R +L+ I+ R L F S+E +NI+KA+LSGYFMQ+A ++ + Sbjct: 576 LNCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIARDVDGS 635 Query: 2347 GHYLTVKDNQVVHLHP---SNCMDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQ 2517 G+YL + QV LHP + PEWV+++++ ++ N+IR ++I E + + PQ Sbjct: 636 GNYLMLTHKQVAQLHPLSGYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQLVPQ 695 Query: 2518 YYDLTNFPSCEAKRVLERL 2574 YY +N P E+K +L+++ Sbjct: 696 YY-FSNLPPSESKDILQQV 713
>Q8BZS9:DHX32_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 -| Mus musculus (Mouse) Length = 744 Score = 369 bits (948), Expect = e-101 Identities = 199/485 (41%), Positives = 304/485 (62%), Gaps = 3/485 (0%) Frame = +2 Query: 206 INRWNGRPYSARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFV 385 +N ++G PYS+RY ++L++R LP+W++K F+ L NQ +++ G++ GK++Q+PQ+ Sbjct: 40 LNPFDGLPYSSRYYKLLKEREELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWC 99 Query: 386 LEAEGLS---NRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVL 556 E LS V CTQ +EMDV IG EVGY I FE+C + +T+L Sbjct: 100 AEY-CLSIHYQHGGVICTQAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETIL 158 Query: 557 KYLTDGMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 736 +Y TD ML RE M++P L Y VI+LD+ HER+LATDVL GLLK+VL RP+LKL+V + Sbjct: 159 RYCTDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCS 218 Query: 737 TLEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILV 916 L K Y+ P+++V + HPVE+ Y ++D E+ IR + +IH GD++V Sbjct: 219 PLLTSKLSSYYGDVPVIEVRNK-HPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVV 277 Query: 917 FLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPA 1096 FL E++IE + +E +N+ VG + V+PLY P + +F P K Sbjct: 278 FLACEQDIEKTYELVCQEGSNLNPDVGDLVVIPLY----PKEKCSLFRPVDETEKRCQVY 333 Query: 1097 GRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRA 1276 R++V++T+ E+ + + +VID G +++VYNPRIR SL++ PIS++ A R Sbjct: 334 QRRVVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLL 393 Query: 1277 GRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 1456 G + GK F LYTE+ + D++P E+ +NL + VL +K++ I L DFM+ PAP Sbjct: 394 GSSPSGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAP 453 Query: 1457 ETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAM 1636 E+LM+ALE L+YL ALD++GNL+ G +MSEFPLDPQ+SK ++ S ++C +E+L+I+AM Sbjct: 454 ESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAM 513 Query: 1637 LSGMS 1651 ++ S Sbjct: 514 VTAPS 518 Score = 135 bits (340), Expect = 1e-30 Identities = 73/198 (36%), Positives = 118/198 (59%), Gaps = 12/198 (6%) Frame = +1 Query: 2014 PNCFLR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQN-----NED--PTWCYENF 2169 P+CFL P A++AA F H +GDH TL+NVY+AY+ NE WC++ F Sbjct: 517 PSCFLHVPHGAEEAAVTCWKTFLHPEGDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCF 576 Query: 2170 VNARAMKSADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAH-LERT 2346 ++ A++ AD +R +L+ I+ R L F S+E +NI+KA+LSGYFMQ+A ++ + Sbjct: 577 LSCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENGLNIKKALLSGYFMQIARDVDGS 636 Query: 2347 GHYLTVKDNQVVHLHPSNCMD---HKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQ 2517 G+YL + QV LHP + PEWV+++++ ++ N+IR + + E + + PQ Sbjct: 637 GNYLMLTHKQVAQLHPLSSYSITKKMPEWVLFHQFSISENNYIRVASAVSPELFMQLVPQ 696 Query: 2518 YYDLTNFPSCEAKRVLER 2571 YY +N P E+K +L++ Sbjct: 697 YY-FSNLPPSESKDILQQ 713
>Q9HE06:YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09| - Schizosaccharomyces pombe (Fission yeast) Length = 647 Score = 364 bits (935), Expect = 1e-99 Identities = 200/464 (43%), Positives = 297/464 (64%), Gaps = 3/464 (0%) Frame = +2 Query: 260 KRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVACTQPX 439 +++ LP+ + +++ L + NQ I++G TG GKTTQIPQF+ EA S ++ CTQP Sbjct: 21 QKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPR 80 Query: 440 XXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPLLERY 619 E++ G GYSI+F+ S KT +KY+TDG+LL E DPLLERY Sbjct: 81 RLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERY 140 Query: 620 KVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPL--MKV 793 +++LDE HERTL+TD+L G+LK +L+ R D +LV+ SA+++A K +F + M + Sbjct: 141 SIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCTMSI 200 Query: 794 PGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEV 973 G+L PVE + Q+P +Y+++AI TV+ I+ P GDILVFL+G +EIE +KI + Sbjct: 201 EGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIEDSL 260 Query: 974 NNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDG 1153 + + + +PL++ L Q ++F+ + +G RK++ STNIAETS+TIDG Sbjct: 261 IHASEDCQTLVPLPLHAGLTVDEQMRVFN-----IYDGD--FRKVIFSTNIAETSITIDG 313 Query: 1154 IVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNG 1333 IVYV+D GF+KQ++YNP R L+ PISK+SA QR+GRAGRT GK FRLYTEK+++ Sbjct: 314 IVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYS- 372 Query: 1334 DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDE 1513 ++ + +IL +++ VL LK LG+ +++ F F P LM ALE L LG LD+ Sbjct: 373 LMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVLDES 432 Query: 1514 GNLTS-LGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 GNLT LG +S LD +SK L+ S ++ C++EILSI+++L+ Sbjct: 433 GNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILT 476 Score = 81.3 bits (199), Expect = 2e-14 Identities = 53/184 (28%), Positives = 93/184 (50%), Gaps = 11/184 (5%) Frame = +1 Query: 1981 FVCYYHILCLVP-----NCFLRPREAQKA-ADEAKARFGHIDGDHLTLLNVYHAYKQNNE 2142 F C + IL + F P + K A A + F +GD +T LNV+ ++ N + Sbjct: 462 FGCTHEILSIASILTAGEVFYNPTSSSKNDAFVAHSSFFANEGDIITALNVFESFVGNKK 521 Query: 2143 DPTWCYENFVNARAMKSADNVRQQLVRIMTRFNL----KMCSTDFNSREYYVNIRKAMLS 2310 D WC +N++N + ++ A ++R LVR + +F++ ++ S+D + I K +L Sbjct: 522 DLQWCRKNYLNYQTLRQALDIRTHLVRFLNKFSIPTAQRLPSSDCS------KILKCLLD 575 Query: 2311 GYFMQVAHLERTGHYLTVKDNQVVHLHPSNCMDHKPEWVIYNEYVLT-TRNFIRTVTDIR 2487 G+ VAHL+ G Y T+ QV S + K W++Y+ V + T+ F++ ++ I Sbjct: 576 GFVRNVAHLQNDGSYKTIGGKQVWLDSSSVLHEKKTPWIMYSSAVESETQIFVKNISKIE 635 Query: 2488 GEWL 2499 WL Sbjct: 636 SFWL 639
>Q5XH12:DHX32_XENLA Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 -| Xenopus laevis (African clawed frog) Length = 748 Score = 343 bits (879), Expect = 3e-93 Identities = 190/483 (39%), Positives = 291/483 (60%), Gaps = 4/483 (0%) Frame = +2 Query: 206 INRWNGRPYSARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFV 385 +N ++G PYS+R+ ++L++R TLP+W+ K +FL L NQ +++ SGK++QIPQ+ Sbjct: 42 LNPFDGLPYSSRFYKLLKERETLPIWKIKYDFLEHLAHNQIVVVSAGPKSGKSSQIPQWC 101 Query: 386 LE--AEGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLK 559 E G V CTQ +EMDV IG EVGY + FE+C + +T+L+ Sbjct: 102 AEYCLAGHYQHGAVVCTQAHKQTAVWLAMRVADEMDVNIGHEVGYIVPFENCCTSETILR 161 Query: 560 YLTDGMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 739 Y TD ML RE M++PLL Y V+++D+ +ER ++TDVL LK + +RP+LK+V+++ Sbjct: 162 YCTDEMLRREMMSNPLLSSYGVVIIDDVYERFVSTDVLLSFLKVIAVSRPELKVVIITCP 221 Query: 740 LEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVF 919 + Y+ APL++ H VE YT RDY +A+R + +IH + GDI+VF Sbjct: 222 SLSGTLVSYYGNAPLVEAE-NTHSVESVYTTSLPRDYFHSALRLLFEIHHTKEKGDIVVF 280 Query: 920 LTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAG 1099 L EEEI+ A I +E +M ++G + + LY Q I D P + Sbjct: 281 LACEEEIKRAYEHIKQEALHMNPELGELMPIALYP------HQSISDYIPYEELDDNSKN 334 Query: 1100 --RKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGR 1273 RK+V++T++ E+ + + I +VID G K+KVYN RIR ESL+ PISK A R Sbjct: 335 PKRKVVLTTSLGESLIWMKNIFFVIDVGIEKRKVYNTRIRAESLVTQPISKVRAKMRKHI 394 Query: 1274 AGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 1453 + GK F LY E F +++P ++ NL + VL LK++ I L H DF++ P Sbjct: 395 LSSSSEGKLFCLYPE-DFAHEMKPFLTAKVEECNLISMVLFLKRMDIAGLAHCDFINRPD 453 Query: 1454 PETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISA 1633 PE+LM+ALE L+YL ALD++GNL+ G +MSEFPLDPQ+SK ++ + ++C +E+L+++A Sbjct: 454 PESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILAACEFDCVDEMLTLAA 513 Query: 1634 MLS 1642 M++ Sbjct: 514 MVT 516 Score = 124 bits (311), Expect = 2e-27 Identities = 72/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%) Frame = +1 Query: 2014 PNCFLR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ---NNEDP----TWCYENF 2169 PNCF+ P EA++ K +F H +GDH TL+N+Y+ Y+Q NN WC + Sbjct: 518 PNCFIDLPPEAKELDLIGKGKFFHPEGDHFTLINIYNEYEQMKRNNASQYDVEKWCQNHC 577 Query: 2170 VNARAMKSADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAH-LERT 2346 ++ A++ A +R +L+ IM R L + F S E NI+K++LSGYFMQ+A ++ Sbjct: 578 LSFVALEMARAIRNELLDIMRRIELPLTGPAFGSDENVTNIKKSLLSGYFMQIARDVDGL 637 Query: 2347 GHYLTVKDNQVVHLHPSN--CMDHK-PEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQ 2517 G+Y+ + QV LHP + C K PEWV+++E+ ++ R+ IR V++I ++ P Sbjct: 638 GNYIMLTHKQVGQLHPDSGFCNSAKVPEWVLFHEFSVSERSCIRIVSEISPNLFMEFVPP 697 Query: 2518 YYDLTNFPSCEAKRVLER 2571 YY +N P E K +L++ Sbjct: 698 YY-FSNLPPSETKDLLQQ 714
>P43329:HRPA_ECOLI ATP-dependent RNA helicase hrpA - Escherichia coli| Length = 1300 Score = 333 bits (854), Expect = 2e-90 Identities = 186/469 (39%), Positives = 286/469 (60%), Gaps = 12/469 (2%) Frame = +2 Query: 272 LPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVACTQPXXXXX 451 LPV Q+K + L +RD+Q +I+ GETGSGKTTQ+P+ +E G + ++ TQP Sbjct: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL-GRGIKGLIGHTQPRRLAA 135 Query: 452 XXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPLLERYKVIV 631 EE+ G +GY +RF D S T++K +TDG+LL E D LL +Y I+ Sbjct: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 Query: 632 LDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLMKVPGRLHP 811 +DEAHER+L D L G LKE+L RPDLK+++ SAT++ E+F +F+ AP+++V GR +P Sbjct: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 Query: 812 VEIFY------TQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEV 973 VE+ Y + ERD L+A V ++ E GDIL+F++GE EI D +NK Sbjct: 256 VEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNKL- 313 Query: 974 NNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDG 1153 + +++PLY+ L + Q ++F +GR+IV++TN+AETSLT+ G Sbjct: 314 -----NLRHTEILPLYARLSNSEQNRVFQ---------SHSGRRIVLATNVAETSLTVPG 359 Query: 1154 IVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNG 1333 I YVIDPG ++ Y+ R +V+ L + PIS+ASA+QR GR GR G C RLY+E F Sbjct: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 Query: 1334 DLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL-- 1504 +P+ T PEILR+NLA+ +L + LG+ D+ F F++ P + + +L LGA+ Sbjct: 420 --RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT 477 Query: 1505 DDEGN---LTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 D++ + LT LG +S+ P+DP++++M++ + ++ C E + I++ LS Sbjct: 478 DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALS 526 Score = 48.1 bits (113), Expect = 2e-04 Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 7/168 (4%) Frame = +1 Query: 2029 RPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ------NNEDPTWCYENFVNARAMK 2190 RP + Q+A+DE RF + D L +N+++ + +N C +++N ++ Sbjct: 533 RPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVR 592 Query: 2191 SADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKD 2370 ++ QL +++ + + S RE ++ A+L+G + + T Sbjct: 593 EWQDIYTQLRQVVKELGIPVNSEPAEYREIHI----ALLTGLLSHIGMKDADKQEYTGAR 648 Query: 2371 NQVVHLHPSNCMDHKP-EWVIYNEYVLTTRNFIRTVTDIRGEWLIDIA 2511 N + P + + KP +WV+ E V T+R + R I EW+ +A Sbjct: 649 NARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696
>P45018:HRPA_HAEIN ATP-dependent RNA helicase hrpA homolog - Haemophilus influenzae| Length = 1304 Score = 326 bits (835), Expect = 4e-88 Identities = 180/470 (38%), Positives = 285/470 (60%), Gaps = 12/470 (2%) Frame = +2 Query: 269 TLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVACTQPXXXX 448 +LPV Q+K E +++ ++Q +++ GETGSGKTTQ+P+ LE G N M+ TQP Sbjct: 82 SLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLEL-GFGNLGMIGHTQPRRIA 140 Query: 449 XXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPLLERYKVI 628 EE++ +G VGY +RF D S T +K +TDG+LL E D L +Y + Sbjct: 141 ARSVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMTDGILLAEIQNDRFLNQYSCL 200 Query: 629 VLDEAHERTLATDVLFGLLKEVL-KNRPDLKLVVMSATLEAEKFQGYFSGAPLMKVPGRL 805 ++DEAHER+L D + G LK++L + R DLKL++ SAT++ E+F +F+ AP+++V GR Sbjct: 201 IIDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVERFSKHFNNAPIIEVSGRT 260 Query: 806 HPVEIFY---TQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVN 976 +PVE+ Y +E ++D L+ + V ++ E GDIL+F+ GE EI D + K+ Sbjct: 261 YPVEVRYRPVVEEDDQDQLQGILNAVDELQ-AEGRGDILIFMNGEREIRDTAEALQKQ-- 317 Query: 977 NMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGI 1156 + +++PL++ L Q KIF P+ +IV++TN+AETSLT+ I Sbjct: 318 ----NLKHTEILPLFARLSAQEQNKIFHPS---------GLNRIVLATNVAETSLTVPSI 364 Query: 1157 VYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNGD 1336 YVIDPG ++ Y+ R +V+ L + PIS+ASA+QR GR GR G C RLY+E+ FN Sbjct: 365 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDFNS- 423 Query: 1337 LQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD-- 1507 +P+ T PEILR+NLA+ +L + LG+DD+ F F+D P + +++L LGA + Sbjct: 424 -RPEFTDPEILRTNLASVILQMTALGLDDIEAFPFVDAPDERHIQDGVKLLEELGAFETV 482 Query: 1508 -----DEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 ++ LT +G +++ P+DP+++KM++ + + C E++ I + LS Sbjct: 483 QTKSGEKRLLTRVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALS 532 Score = 60.1 bits (144), Expect = 5e-08 Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 13/192 (6%) Frame = +1 Query: 1975 MGFVCYYHILCLVPNCFL-----RPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNN 2139 + F C Y ++ +V + RP+E Q+A+DE RF D L LN++ ++ Sbjct: 516 VNFGCVYEMMIIVSALSIQDPRERPQEKQQASDEKHRRFADKKSDFLAFLNLWRYLQEQQ 575 Query: 2140 EDPT------WCYENFVNARAMKSADNVRQQLVRIMTRFNLKMCSTDFNS-REYYVNIRK 2298 ++ + C ++F+N ++ ++ Q+ R ++ S NS + Y I Sbjct: 576 KESSKNQFRRQCQKDFLNYLRIREWQDIYHQI-----RLTVREMSLPINSEKAEYQQIHT 630 Query: 2299 AMLSGYFMQVAHLE-RTGHYLTVKDNQVVHLHPSNCMDHKPEWVIYNEYVLTTRNFIRTV 2475 A+LSG + E YL ++ S +P+WV+ E V T++ + R V Sbjct: 631 ALLSGLLSHIGLKEAEKQQYLGARNAHFAIFPNSVLFKKQPKWVMAAELVETSKLWGRMV 690 Query: 2476 TDIRGEWLIDIA 2511 +I EW+ +A Sbjct: 691 AEIEPEWIEPLA 702
>Q9HDY4:YK16_SCHPO Putative ATP-dependent RNA helicase PB1A10.06c - Schizosaccharomyces| pombe (Fission yeast) Length = 1183 Score = 325 bits (832), Expect = 9e-88 Identities = 198/527 (37%), Positives = 286/527 (54%), Gaps = 62/527 (11%) Frame = +2 Query: 248 EILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLS----NRS 415 EI E R LP+ ++ + + N +I+ G TGSGKTTQ+PQF+ EA S N Sbjct: 390 EIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPG 449 Query: 416 MVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAM 595 M+A TQP EE+ +V Y IRF+ + T +K++TDG+LLRE Sbjct: 450 MIAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELS 508 Query: 596 ADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD----------LKLVVMSATLE 745 +D LL Y +++DEAHER++ TD+L GLL +++ R + LKL++MSATL Sbjct: 509 SDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLR 568 Query: 746 AEKFQG----YFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDIL 913 F + P++K+ R +PV I + + + DYL+ A V IH PAG IL Sbjct: 569 VTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSIL 628 Query: 914 VFLTGEEEIEDACRKINKE----------------------VNN---------------- 979 VFLTG++E+E C+ + K V N Sbjct: 629 VFLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQVPTS 688 Query: 980 ------MGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSL 1141 D+ P+ V+PLYS L Q K+FD +P EG R +V+TN+AETS+ Sbjct: 689 SSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSP----EGH---RMCIVATNVAETSI 741 Query: 1142 TIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEK 1321 TI I YV+D G +K++VYN + V+ V ISKA+A QRAGRAGRT PG C+RLY+ Sbjct: 742 TIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSA 801 Query: 1322 SFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGA 1501 F+ + PEILR+ + + VL +K + ID++ +F F P L ++L++L+ LGA Sbjct: 802 VFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLGA 861 Query: 1502 LDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 +D EG LT LGE MS FPL P+ SKML+I ++ C ++++ + LS Sbjct: 862 IDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALS 908 Score = 44.7 bits (104), Expect = 0.002 Identities = 40/163 (24%), Positives = 80/163 (49%), Gaps = 13/163 (7%) Frame = +1 Query: 2062 AKARFGHIDGDH--LTLLNVYHAYKQNNEDPTWCYENFVNARAMKSADNVRQQLVRIMTR 2235 A +RF ID D L+LL+ AY ++ +C EN++ +A++ N+R+Q++ ++ R Sbjct: 957 AISRFQAIDPDAPALSLLSAVCAYDYASDKRKFCKENYLREKALEEVTNLRKQIIGLLKR 1016 Query: 2236 FNLKMCSTDFN------SREYYVNIRKAMLSGYFMQVAHLERTGH-YLTV--KDNQVVHL 2388 + +++ F + +R+ + S Y QVA ++ Y+T+ ++VV Sbjct: 1017 YMVRVEKEFFKLQLKPPTSVQIKALRQFIASAYIDQVALYDKEKRGYVTLFPSGSEVVQF 1076 Query: 2389 HPSNCMDHKPEWVIYNEY--VLTTRNFIRTVTDIRGEWLIDIA 2511 P + E+V+Y + R ++ +T+I E L +A Sbjct: 1077 VPDRTYNIDSEYVVYLSLHESRSGRVYMSPLTEISPEHLARLA 1119
>Q9DBV3:DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 - Mus musculus (Mouse)| Length = 1145 Score = 307 bits (787), Expect = 1e-82 Identities = 183/483 (37%), Positives = 274/483 (56%), Gaps = 12/483 (2%) Frame = +2 Query: 239 RYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSM 418 R ++ +R LP+ Q + L+ L+++Q +++ G+TG GK+TQ+PQ++L A G S+ Sbjct: 153 RLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAA-GFSH--- 208 Query: 419 VACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMA 598 VACTQP E G +VGY IRFE S T + +LT G+LLR+ Sbjct: 209 VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQR 268 Query: 599 DPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGA 778 +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+++MSAT+ F YFS A Sbjct: 269 EPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHA 328 Query: 779 PLMKVPGRLHPVEIFYTQEPERDYLEA------------AIRTVVQIHMCEPAGDILVFL 922 P+++VPGRL P+ + Y Q E D + + + + E GD+LVFL Sbjct: 329 PVVQVPGRLFPITVVY-QPQEADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFL 387 Query: 923 TGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGR 1102 +G EI + V V+PL+S L + Q K+FD AP + R Sbjct: 388 SGMAEITTVLDAAQAYASLTQRWV----VLPLHSALSVSDQDKVFDVAPAGV-------R 436 Query: 1103 KIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGR 1282 K ++STNIAETS+TIDGI +V+D G K+ Y+P+ +++ L IS+ASA QR GRAGR Sbjct: 437 KCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGR 496 Query: 1283 TQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPET 1462 T PG C+RLY E ++ P PEI R L VL +K + + D F F++PP P + Sbjct: 497 TGPGVCYRLYAESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPAS 555 Query: 1463 LMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 + A+ L GALD LT +G ++++ P+D + KML++ ++ + +L+I+A LS Sbjct: 556 VETAILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALS 615 Query: 1643 GMS 1651 S Sbjct: 616 VQS 618
>Q924H9:DQX1_MOUSE ATP-dependent RNA helicase DQX1 - Mus musculus (Mouse)| Length = 718 Score = 307 bits (786), Expect = 2e-82 Identities = 184/489 (37%), Positives = 287/489 (58%), Gaps = 9/489 (1%) Frame = +2 Query: 203 SINRWNGRPYSARYLEILEKRRTLPVWQQKDEFLRVLRDNQT--LILVGETGSGKTTQIP 376 ++N ++G P+S+ Y E+LE+RR LP+W + FL L + T +++ G+ GSGK+TQIP Sbjct: 19 AVNPFDGLPFSSCYYELLEQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIP 78 Query: 377 QFVLE---AEGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHK 547 Q+ E A G V TQP +EMD+T+G E+GYSI EDC+ Sbjct: 79 QWCAEFALARGFQT-GQVTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPN 137 Query: 548 TVLKYLTDGMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEV-LKNRP-DLKL 721 T+L++ D + L+E + + V++LDEA ER++A+D+L GLL++ L+N P D ++ Sbjct: 138 TMLRFCWDRLFLQEVASTRGPGAWSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDPRV 197 Query: 722 VVMSATLEAEKFQGYFSGAPLMKVPGRLH-PVEIFYTQEPERDYLEAAIRTVVQIHMCEP 898 VV++ KFQ ++ +P+++VP + Y D +EAA + V+++ E Sbjct: 198 VVVTDPALEPKFQAFWGNSPIVRVPREPGGDPTLAYKDTVPTDLVEAACQAVLELCQQEE 257 Query: 899 A-GDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPP 1075 A GD+LV+L EEEI C ++ E+ + P +V+PL+ A+Q D Sbjct: 258 APGDVLVYLPSEEEISLCCESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQTVYEDT---- 313 Query: 1076 LKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASA 1255 + RKIVV+ +A+ S ++ I +VID G + VYNPRIR ES ++ PISK A Sbjct: 314 ----DVSVRKIVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQA 369 Query: 1256 HQRAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFD 1435 R RA PG C RLY++ + + P +P++ NL++ VL L + I + Sbjct: 370 EARLLRAKGFPPGSCLRLYSKSTLELEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECH 429 Query: 1436 FMDPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNE 1615 F+D PAPE LMRALE L+YL AL+D+G L+ LG ++SEFPL P+++K L+ S +NC +E Sbjct: 430 FLDRPAPEALMRALEDLDYLAALNDDGELSDLGVILSEFPLPPELAKALLASCEFNCVDE 489 Query: 1616 ILSISAMLS 1642 +L+++AML+ Sbjct: 490 MLTLAAMLT 498 Score = 109 bits (272), Expect = 8e-23 Identities = 65/210 (30%), Positives = 110/210 (52%), Gaps = 7/210 (3%) Frame = +1 Query: 1999 ILCLVPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNA 2178 +L P P A +AA + H DGDH +L+ VY A+ Q+ D WC +N Sbjct: 496 MLTAAPGFTRPPLSAGEAA--LRRALEHADGDHSSLIQVYEAFVQSGADEAWCQARGLNW 553 Query: 2179 RAMKSADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAH-LERTGHY 2355 ++ A +R +LV +M R L + F S + +++KA+LSGYF++VA + TG+Y Sbjct: 554 ESLCQARKLRAELVELMQRIELPLSQPAFGSEQNRRDLQKALLSGYFLKVARDTDGTGNY 613 Query: 2356 LTVKDNQVVHLHPSNCMDHK------PEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQ 2517 L + V L P ++ P WV+Y+ + ++ N + V++I+ E L+++AP Sbjct: 614 LLLTHKHVAQLSPYCSYRNRRTPAQPPTWVLYHSFSISKDNCLCIVSEIQPEMLVELAPP 673 Query: 2518 YYDLTNFPSCEAKRVLERLHNKRERERAAS 2607 Y+ L+N P E++ +L +L AA+ Sbjct: 674 YF-LSNLPPSESRDLLNQLREGTAEPPAAA 702
>Q8TE96:DQX1_HUMAN ATP-dependent RNA helicase DQX1 - Homo sapiens (Human)| Length = 717 Score = 305 bits (782), Expect = 6e-82 Identities = 186/489 (38%), Positives = 286/489 (58%), Gaps = 9/489 (1%) Frame = +2 Query: 203 SINRWNGRPYSARYLEILEKRRTLPVWQQKDEFLRVLRDNQT--LILVGETGSGKTTQIP 376 ++N ++G P+S+RY E+L++R+ LP+W + FL L N T +++ GE GSGK+TQIP Sbjct: 22 AVNPFDGLPFSSRYYELLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIP 81 Query: 377 QFVLE---AEGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHK 547 Q+ E A G + V TQP +EMD+T+G EVGYSI EDC+ Sbjct: 82 QWCAEFALARGFQ-KGQVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPN 140 Query: 548 TVLKYLTDGMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEV-LKNRP-DLKL 721 T+L++ D +LL+E + + V+VLDEA ER++A+D L GLL++ L+ P DL++ Sbjct: 141 TLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRV 200 Query: 722 VVMSATLEAEKFQGYFSGAPLMKVPGRL--HPVEIFYTQEPERDYLEAAIRTVVQIHMCE 895 VV++ K + ++ P++ +P P I++ P D +EAA + V+++ E Sbjct: 201 VVVTDPALEPKLRAFWGNPPIVHIPREPGERPSPIYWDTIPP-DRVEAACQAVLELCRKE 259 Query: 896 PAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPP 1075 GD+LVFL EEEI C +++EV ++ Q P +V+PL+ A+Q D Sbjct: 260 LPGDVLVFLPSEEEISLCCESLSREVESLLLQGLPPRVLPLHPDCGRAVQAVYEDMD--- 316 Query: 1076 LKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASA 1255 RK+VV+ +A+ S ++ I +VID G + VYNPRIR E ++ PISK A Sbjct: 317 -------ARKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQA 369 Query: 1256 HQRAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFD 1435 R RA PG C LY + + P P + NL++ VL LK+ I + Sbjct: 370 EARRLRARGFPPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECH 429 Query: 1436 FMDPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNE 1615 F+D PAPE LM+ALE L+YL ALDD+G+L+ LG ++SEFPL P+++K L+ S ++C +E Sbjct: 430 FLDQPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDE 489 Query: 1616 ILSISAMLS 1642 +L+++AML+ Sbjct: 490 MLTLAAMLT 498 Score = 109 bits (272), Expect = 8e-23 Identities = 63/212 (29%), Positives = 111/212 (52%), Gaps = 7/212 (3%) Frame = +1 Query: 1999 ILCLVPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNA 2178 +L P P A++AA + H DGDH +L+ VY A+ Q+ D WC +N Sbjct: 496 MLTAAPGFTRPPLSAEEAA--LRRALEHTDGDHSSLIQVYEAFIQSGADEAWCQARGLNW 553 Query: 2179 RAMKSADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAH-LERTGHY 2355 A+ A +R +L+ +M R L + F S + +++KA++SGYF++VA + TG+Y Sbjct: 554 AALCQAHKLRGELLELMQRIELPLSLPAFGSEQNRRDLQKALVSGYFLKVARDTDGTGNY 613 Query: 2356 LTVKDNQVVHLHPSNCMDHK------PEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQ 2517 L + V L C + P WV+Y+ + ++ N + V++I+ + L+++AP Sbjct: 614 LLLTHKHVAQLSSYCCYRSRRAPARPPPWVLYHNFTISKDNCLSIVSEIQPQMLVELAPP 673 Query: 2518 YYDLTNFPSCEAKRVLERLHNKRERERAASRN 2613 Y+ L+N P E++ +L +L A S++ Sbjct: 674 YF-LSNLPPSESRDLLNQLREGMADSTAGSKS 704
>Q3ZBE0:DQX1_BOVIN ATP-dependent RNA helicase DQX1 - Bos taurus (Bovine)| Length = 719 Score = 294 bits (752), Expect = 2e-78 Identities = 181/489 (37%), Positives = 288/489 (58%), Gaps = 9/489 (1%) Frame = +2 Query: 203 SINRWNGRPYSARYLEILEKRRTLPVWQQKDEFLRVLRDNQT--LILVGETGSGKTTQIP 376 ++N ++G P+S+RY ++LE+RR+LPVW + FL L + + +++ GE G GK+TQIP Sbjct: 22 AVNPFDGLPFSSRYYKLLEQRRSLPVWAARFIFLEHLESSPSGVVLVSGEPGCGKSTQIP 81 Query: 377 QFVLE---AEGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHK 547 Q+ E A G + V TQP +EMD+T+G EVGYSI EDC+ Sbjct: 82 QWCAEFVLARGFQ-KGWVTVTQPYPLAALSLALRVADEMDLTLGHEVGYSIPQEDCTGPD 140 Query: 548 TVLKYLTDGMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEV-LKNRP-DLKL 721 T+L++ D +LL+E + V++LDEA ER++A+D+L GLL++ L + P DL++ Sbjct: 141 TLLRFCWDRLLLQEVASTRGTGARGVLILDEAQERSVASDLLQGLLRDARLGSLPGDLRV 200 Query: 722 VVMSATLEAEKFQGYFSGAPLMKVPGRLH--PVEIFYTQEPERDYLEAAIRTVVQIHMCE 895 VV++ K Q ++ G P + VP + P ++ P D ++AA + V++ E Sbjct: 201 VVVTDPSLEPKLQDFWGGPPTVCVPRKTGSCPTPVYRDSLPA-DRVDAACQAVLEWCQEE 259 Query: 896 PAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPP 1075 GD+LV+L EEEI C ++++V ++ +Q P +V+PL+ A+Q D Sbjct: 260 APGDVLVYLPSEEEISLCCESLSRKVRSLENQGPPPRVLPLHPGCGQAVQAVYEDT---- 315 Query: 1076 LKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASA 1255 E G RK+VV+ +A+ S ++ I +VID G + VY+P+IR ES ++ P+SK A Sbjct: 316 --ESG--ARKVVVTHWLADFSFSLPSIRHVIDSGLELRSVYSPQIRAESQVLRPVSKCQA 371 Query: 1256 HQRAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFD 1435 R RA PG C LY + + P + NL++ +L LK+ I + Sbjct: 372 EARRLRAAGIPPGSCLCLYPKSFLELEAPYLPQPRVWAENLSSLMLLLKRRQIAEPGKCH 431 Query: 1436 FMDPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNE 1615 F+D PAPE LM+ALE L+YL ALDD+G+L+ LG ++SEFPL P+++K L+ S ++C +E Sbjct: 432 FLDRPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDE 491 Query: 1616 ILSISAMLS 1642 +L+++AML+ Sbjct: 492 MLTLAAMLT 500 Score = 112 bits (279), Expect = 1e-23 Identities = 61/187 (32%), Positives = 105/187 (56%), Gaps = 9/187 (4%) Frame = +1 Query: 2053 ADEAKAR--FGHIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMKSADNVRQQLVRI 2226 A+EA R H+DGDH +L+ VY A+ Q+ D WC +N A+ A +R +L+ + Sbjct: 512 AEEAALRRALEHVDGDHSSLIQVYEAFIQSGADKAWCQARGLNWAALCQARKLRGELLEL 571 Query: 2227 MTRFNLKMCSTDFNSREYYVNIRKAMLSGYFMQVAH-LERTGHYLTVKDNQVVHLHPSNC 2403 M R L + F S +++KA++SGYF++VA + TG+YL + V L P+ C Sbjct: 572 MQRIELPLSQPAFGSERNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSPNCC 631 Query: 2404 MDHK------PEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQYYDLTNFPSCEAKRVL 2565 + P WV+Y+ + ++ N + V++I+ + L+++AP Y+ L+N P E++ L Sbjct: 632 YRSRRAPARPPLWVLYHSFSISKDNCLSIVSEIQPQMLVELAPPYF-LSNLPPSESRDFL 690 Query: 2566 ERLHNKR 2586 +L +R Sbjct: 691 NQLREER 697
>Q5ZI74:DHX30_CHICK Putative ATP-dependent RNA helicase DHX30 - Gallus gallus (Chicken)| Length = 1231 Score = 250 bits (638), Expect = 3e-65 Identities = 166/490 (33%), Positives = 260/490 (53%), Gaps = 28/490 (5%) Frame = +2 Query: 257 EKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLE---AEGLSNRSMVAC 427 ++ LPV KD L + N +++ G+TG GKTT+IPQ +LE EG R V Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVI 532 Query: 428 TQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKT-VLKYLTDGMLLREAMADP 604 TQP +E+ + + VGY +R E + L + T G+LLR+ +P Sbjct: 533 TQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNP 592 Query: 605 LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPL 784 LE +V+DE HER + TD L LLK + K PDL+LV+MSAT + ++F YF G P+ Sbjct: 593 SLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGGCPV 652 Query: 785 MKVPGRLHPVEIFYTQE--------PERDY------------LEAAIRTVVQIHMCEPAG 904 +KVPG ++PV+ +Y +E R Y L+ V+QI G Sbjct: 653 VKVPGFMYPVKEYYLEEILAKLGRHRHRHYEIKQSDDECVLDLDLITDLVLQIDAHGEPG 712 Query: 905 DILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKE 1084 IL FL G +EI+ +++ + +G Q V+P++S +P QQ IF PP + Sbjct: 713 GILCFLPGWQEIKGVQQRL---LEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGV-- 767 Query: 1085 GGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQR 1264 RKIV++TNIAETS+TI+ IV+V+D G K++ Y+ + +V L +SK++ QR Sbjct: 768 -----RKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQR 822 Query: 1265 AGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDF-- 1438 GRAGR Q G + L+ + + PEILR+ L N V+ K+ + + +F Sbjct: 823 RGRAGRCQSGFAYHLFPRSRLD-KMPTYQVPEILRTPLENLVVQ-AKIHMPEKTAVEFLS 880 Query: 1439 --MDPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSN 1612 +D P + + A+ +L +G LD LT+LG+ +++ DP+++K +V++ Y C + Sbjct: 881 KALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLH 940 Query: 1613 EILSISAMLS 1642 +L I + L+ Sbjct: 941 PLLVIVSCLT 950
>Q2NKY8:DHX30_BOVIN Putative ATP-dependent RNA helicase DHX30 - Bos taurus (Bovine)| Length = 1220 Score = 236 bits (601), Expect = 5e-61 Identities = 172/553 (31%), Positives = 277/553 (50%), Gaps = 47/553 (8%) Frame = +2 Query: 125 VDKTSVSSKLGRAGINGXXXXXXXNPSINRWNGRPY----SARYLEILEK-----RRTLP 277 V+ + +SS+L G + P + G+PY A L + + RR P Sbjct: 393 VESSWISSELRLQGEDILPLGKDSGPLSDPITGKPYVPLSEAEELRLSQSLLELWRRRGP 452 Query: 278 VWQQ---------KDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLE---AEGLSNRSMV 421 VWQ+ +D L + + +++ G+TG GKTT+IPQ +LE EG R V Sbjct: 453 VWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNV 512 Query: 422 ACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKT-VLKYLTDGMLLREAMA 598 TQP E+ T+ VG+ +R E + L + T G+LLR+ + Sbjct: 513 IITQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQS 572 Query: 599 DPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGA 778 +P LE +V+DE HER + TD L LLK + + P L+LV+MSAT + E+F YF G Sbjct: 573 NPSLEGVSHVVVDEEHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGC 632 Query: 779 PLMKVPGRLHPVEIFYTQE----------PERDY-----------LEAAIRTVVQIHMCE 895 P++KVPG ++PV+ Y ++ P R L+ V+ I Sbjct: 633 PVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARG 692 Query: 896 PAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPP 1075 G IL FL G +EI+ +++ + +G ++P++S +P Q+ IF PP Sbjct: 693 EPGGILCFLPGWQEIKGVQQRLQEA---LGMHESKYLILPVHSNIPMMDQKAIFQ--QPP 747 Query: 1076 LKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASA 1255 + RKIV++TNIAETS+TI+ IV+V+D G K++ Y+ + +V L +S+A+ Sbjct: 748 I-----GVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANV 802 Query: 1256 HQRAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFD 1435 QR GRAGR Q G + L+ + P PEILR+ L N VL K+ + + + Sbjct: 803 IQRRGRAGRCQSGFAYHLFPRSRLE-KMAPFQVPEILRTPLENLVLQ-AKIHMPEKTAVE 860 Query: 1436 FM----DPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYN 1603 F+ D P + + A+ +L +G LD LT+LG+ ++ DP+++K +V++ + Sbjct: 861 FLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFR 920 Query: 1604 CSNEILSISAMLS 1642 C + +L + + L+ Sbjct: 921 CLHPLLVVVSCLT 933
>Q06698:YL419_YEAST Putative ATP-dependent RNA helicase YLR419W - Saccharomyces| cerevisiae (Baker's yeast) Length = 1435 Score = 233 bits (594), Expect = 3e-60 Identities = 161/527 (30%), Positives = 264/527 (50%), Gaps = 55/527 (10%) Frame = +2 Query: 233 SARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLE----AEG 400 S+ Y + R LP W+++ + ++ N+ +++ GETGSGK+TQ+ QF+L+ +G Sbjct: 591 SSEYKSMQLVREQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDFLQKEKG 650 Query: 401 LSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGML 580 ++ + CTQP +E VT GEEVGY IR + + T +K++T G+L Sbjct: 651 DFGKTKIVCTQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKASTRIKFMTTGVL 710 Query: 581 LREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQ 760 +R + ++V+DE HER++ TD++ L+K +L +K+V+MSAT+ + F+ Sbjct: 711 VRLLQNARTMLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVNVDLFK 770 Query: 761 GYFSGAPLMKVPGRLHPVEIFYTQEPERD--------------------------YL--- 853 +F G + GR P+ ++ ++ D YL Sbjct: 771 KFFPGLATCHIEGRTFPITDYFLEDILSDLDFKIKREKALSYDDDSVDERNNDDQYLKPR 830 Query: 854 -EAAIRTVVQIH---MCEPA-------------GDILVFLTGEEEIEDACRKINKEVNNM 982 ++ T QI+ +C+ G I+VFL G EI C + + N Sbjct: 831 ADSKFFTSGQINYDLLCQVVEYVHKRLKAANDNGSIIVFLPGVGEINKCCNLLANKSNE- 889 Query: 983 GDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVY 1162 V+PL+S L P Q+++F K G RK+VVSTNIAETS+TID V Sbjct: 890 ----ADFMVLPLHSALTPEDQKRVFK------KYHGK--RKVVVSTNIAETSITIDDCVA 937 Query: 1163 VIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNGDLQ 1342 ID G +K YNP+ L+ S ISKA QR GRAGR + G ++L+++ + D+ Sbjct: 938 TIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMI 997 Query: 1343 PQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDD-E 1513 PEI R L + L++K +GI D+ F +D P L +A +L +G +D+ + Sbjct: 998 SMPIPEIKRIPLESLYLSVKAMGIKDVKAFLSTALDAPPLPALQKAERILTTIGLVDESD 1057 Query: 1514 GNLTSLGEMMSEFP-LDPQMSKMLVISPRYNCSN-EILSISAMLSGM 1648 +LT LG+ +S P +D + K+L+ + C++ +L +S + G+ Sbjct: 1058 KSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLLVSILGIGV 1104
>Q7L2E3:DHX30_HUMAN Putative ATP-dependent RNA helicase DHX30 - Homo sapiens (Human)| Length = 1194 Score = 231 bits (589), Expect = 1e-59 Identities = 158/498 (31%), Positives = 256/498 (51%), Gaps = 38/498 (7%) Frame = +2 Query: 263 RRTLPVWQQ---------KDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLE---AEGLS 406 RR PVWQ+ +D L + + +++ G+TG GKTT+IPQ +LE EG Sbjct: 422 RRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRG 481 Query: 407 NRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCS-SHKTVLKYLTDGMLL 583 R V TQP E+ ++ VG+ +R E S L + T G+LL Sbjct: 482 ARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILL 541 Query: 584 REAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 763 R+ ++P LE +++DE HER + TD L LLK + + P L+LV+MSAT + E+F Sbjct: 542 RKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSR 601 Query: 764 YFSGAPLMKVPGRLHPVEIFYTQE-----PERDY----------------LEAAIRTVVQ 880 YF G P++KVPG ++PV+ Y ++ + Y L+ V+ Sbjct: 602 YFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLH 661 Query: 881 IHMCEPAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFD 1060 I G IL FL G +EI+ +++ + +G ++P++S +P Q+ IF Sbjct: 662 IDARGEPGGILCFLPGWQEIKGVQQRLQEA---LGMHESKYLILPVHSNIPMMDQKAIFQ 718 Query: 1061 PAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPI 1240 P + RKIV++TNIAETS+TI+ IV+V+D G K++ Y+ + +V L + Sbjct: 719 QPPVGV-------RKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771 Query: 1241 SKASAHQRAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDD 1420 S+A+ QR GRAGR Q G + L+ + P PEILR+ L N VL K+ + + Sbjct: 772 SRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQ-AKIHMPE 829 Query: 1421 LVHFDFM----DPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVI 1588 +F+ D P + + A+ +L +G LD LT+LG+ ++ DP+++K +V+ Sbjct: 830 KTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVL 889 Query: 1589 SPRYNCSNEILSISAMLS 1642 + + C + +L + + L+ Sbjct: 890 AAIFRCLHPLLVVVSCLT 907
>Q5UQ96:YL540_MIMIV Putative ATP-dependent RNA helicase L540 - Mimivirus| Length = 695 Score = 231 bits (588), Expect = 2e-59 Identities = 154/504 (30%), Positives = 257/504 (50%), Gaps = 19/504 (3%) Frame = +2 Query: 209 NRWNGRPYSARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVL 388 N N PYS Y ++ T P + D L L + Q + + TGSGK+ IP+ L Sbjct: 22 NPLNNEPYSDDYKKLAMVWSTYPAYSAADRVLSALENYQLVFVTSSTGSGKSVLIPKLAL 81 Query: 389 EAEGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLK--Y 562 + R V T P + DV +GE +GY+ + D S + K Y Sbjct: 82 HYTNYNGR--VVMTLPKRIITLSAAIFSAKVSDVKLGESIGYAYKGSDKSMYNDQNKIIY 139 Query: 563 LTDGMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLK--NRPDLKLVVMSA 736 +TDG+ + E + DPLL ++ V+++DEAHER + D++ L+ +L+ NRPDLK+++MSA Sbjct: 140 VTDGIFVMEYVRDPLLSKFNVVIIDEAHERRIQIDLILLFLRTLLQSGNRPDLKVIIMSA 199 Query: 737 TLEAEKFQGYFSG--APLMKVPGRL-HPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGD 907 T++ +K+Q YF+ + ++ + G+ HP+E + +P Y++ + + + + D Sbjct: 200 TIDTDKYQKYFNSVDSTVIDIAGQPNHPIETHFMDKPVTSYMKEGLELIEDLIHQQIKKD 259 Query: 908 ILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEG 1087 +L F+T E CR I Q V V +YS + ++Q + + E Sbjct: 260 MLFFITTSNEALQLCRSIRP-------QYPRVYCVEVYSDMDKNLKQ--YAESRDKYLEL 310 Query: 1088 GPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRA 1267 G +K+V++TN+AE+SLTIDG+VYVID G+ ++P + L +SKA A QR Sbjct: 311 GNYDQKLVMATNVAESSLTIDGLVYVIDSGYELSSRFDPECYGQILEKKFVSKAQALQRR 370 Query: 1268 GRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKL--------GIDDL 1423 GR GRT+PG C+ L T++ F+G L P+ILR ++ ++ + ++ GI+ Sbjct: 371 GRVGRTEPGVCYHLLTKQQFDG-LADYPTPDILRQDITMDLIKIIQVSPNKTYAEGIN-- 427 Query: 1424 VHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDP-QMSKMLVISPRY 1600 + MDPP + + + +DD G LT +G + ++F P L+ + Sbjct: 428 MMNQLMDPPLRSHINATRNLFDLYNVVDDNGILTQVGIVATQFSSLPLNRILFLIYAFEL 487 Query: 1601 NCSNE---ILSISAMLSGMSTNNF 1663 C+ E I++++ L+G TN F Sbjct: 488 QCAREASIIVAMTEFLNGRVTNLF 511
>Q5BJS0:DHX30_RAT Putative ATP-dependent RNA helicase DHX30 - Rattus norvegicus (Rat)| Length = 1194 Score = 230 bits (587), Expect = 2e-59 Identities = 158/498 (31%), Positives = 257/498 (51%), Gaps = 38/498 (7%) Frame = +2 Query: 263 RRTLPVWQQ---------KDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLE---AEGLS 406 RR P+WQ+ +D L + + +++ G+TG GKTT+IPQ +LE EG Sbjct: 422 RRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRG 481 Query: 407 NRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKT-VLKYLTDGMLL 583 R V TQP E+ ++ VG+ +R E + L + T G+LL Sbjct: 482 ARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILL 541 Query: 584 REAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 763 R+ ++P LE +++DE HER + TD L LLK + + P L+LV+MSAT + E+F Sbjct: 542 RKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSR 601 Query: 764 YFSGAPLMKVPGRLHPVEIFYTQE----------PERDY-----------LEAAIRTVVQ 880 YF G P++KVPG ++PV+ Y ++ P R L+ V+ Sbjct: 602 YFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLH 661 Query: 881 IHMCEPAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFD 1060 I G IL FL G +EI+ +++ + +G ++P++S +P Q+ IF Sbjct: 662 IDARGEPGGILCFLPGWQEIKGVQQRLQEA---LGMHESKYLILPVHSNIPMMDQKAIFQ 718 Query: 1061 PAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPI 1240 PPL RKIV++TNIAETS+T++ IV+V+D G K++ Y+ + +V L + Sbjct: 719 --QPPL-----GVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771 Query: 1241 SKASAHQRAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDD 1420 S+A+ QR GRAGR Q G + L+ + P PEILR+ L N VL K+ + + Sbjct: 772 SRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQ-AKIHMPE 829 Query: 1421 LVHFDFM----DPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVI 1588 +F+ D P + + A+ +L +G LD LT+LG+ ++ DP+++K +V+ Sbjct: 830 KTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVL 889 Query: 1589 SPRYNCSNEILSISAMLS 1642 + + C + +L + + L+ Sbjct: 890 AAIFRCLHPLLVVVSCLT 907
>Q99PU8:DHX30_MOUSE Putative ATP-dependent RNA helicase DHX30 - Mus musculus (Mouse)| Length = 1217 Score = 230 bits (587), Expect = 2e-59 Identities = 158/498 (31%), Positives = 257/498 (51%), Gaps = 38/498 (7%) Frame = +2 Query: 263 RRTLPVWQQ---------KDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLE---AEGLS 406 RR P+WQ+ +D L + + +++ G+TG GKTT+IPQ +LE EG Sbjct: 445 RRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRG 504 Query: 407 NRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKT-VLKYLTDGMLL 583 R V TQP E+ ++ VG+ +R E + L + T G+LL Sbjct: 505 ARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILL 564 Query: 584 REAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 763 R+ ++P LE +++DE HER + TD L LLK + + P L+LV+MSAT + E+F Sbjct: 565 RKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSR 624 Query: 764 YFSGAPLMKVPGRLHPVEIFYTQE----------PERDY-----------LEAAIRTVVQ 880 YF G P++KVPG ++PV+ Y ++ P R L+ V+ Sbjct: 625 YFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLH 684 Query: 881 IHMCEPAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFD 1060 I G IL FL G +EI+ +++ + +G ++P++S +P Q+ IF Sbjct: 685 IDARGEPGGILCFLPGWQEIKGVQQRLQEA---LGMHESKYLILPVHSNIPMMDQKAIFQ 741 Query: 1061 PAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPI 1240 PPL RKIV++TNIAETS+T++ IV+V+D G K++ Y+ + +V L + Sbjct: 742 --QPPL-----GVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 794 Query: 1241 SKASAHQRAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDD 1420 S+A+ QR GRAGR Q G + L+ + P PEILR+ L N VL K+ + + Sbjct: 795 SRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQ-AKIHMPE 852 Query: 1421 LVHFDFM----DPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVI 1588 +F+ D P + + A+ +L +G LD LT+LG+ ++ DP+++K +V+ Sbjct: 853 KTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVL 912 Query: 1589 SPRYNCSNEILSISAMLS 1642 + + C + +L + + L+ Sbjct: 913 AAIFRCLHPLLVVVSCLT 930
>Q5R607:DHX30_PONPY Putative ATP-dependent RNA helicase DHX30 - Pongo pygmaeus| (Orangutan) Length = 1194 Score = 227 bits (579), Expect = 2e-58 Identities = 156/498 (31%), Positives = 255/498 (51%), Gaps = 38/498 (7%) Frame = +2 Query: 263 RRTLPVWQQ---------KDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLE---AEGLS 406 RR PVWQ+ +D L + + +++ G+TG GKTT+IPQ +LE EG Sbjct: 422 RRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRG 481 Query: 407 NRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKT-VLKYLTDGMLL 583 R V TQP E+ ++ VG+ +R E + L + T G+LL Sbjct: 482 ARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILL 541 Query: 584 REAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 763 R+ ++P LE +++DE HER + TD L LLK + + P L+LV+MSAT + E+F Sbjct: 542 RKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSR 601 Query: 764 YFSGAPLMKVPGRLHPVEIFYTQE-----PERDY----------------LEAAIRTVVQ 880 YF G P++KVPG ++PV+ Y ++ + Y L+ V+ Sbjct: 602 YFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLH 661 Query: 881 IHMCEPAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFD 1060 I G IL FL G +EI+ +++ + +G ++P++S +P Q+ IF Sbjct: 662 IDARGEPGGILCFLPGWQEIKGVQQRLQEA---LGMHESKYLILPVHSNIPMMDQKAIFQ 718 Query: 1061 PAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPI 1240 P + RKIV++TNIAETS TI+ IV+V+D G K++ Y+ + +V L + Sbjct: 719 QPPVGV-------RKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771 Query: 1241 SKASAHQRAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDD 1420 S+A+ QR GRAGR Q G + L+ + P PEILR+ L N VL K+ + + Sbjct: 772 SRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQ-AKIHMPE 829 Query: 1421 LVHFDFM----DPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVI 1588 +F+ D P + + A+ +L +G LD LT+LG+ ++ +P+++K +V+ Sbjct: 830 KTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTEPRLAKAIVL 889 Query: 1589 SPRYNCSNEILSISAMLS 1642 + + C + +L + + L+ Sbjct: 890 AAIFRCLHPLLVVVSCLT 907
>Q68FK8:DHX9_XENLA ATP-dependent RNA helicase A-like protein - Xenopus laevis (African| clawed frog) Length = 1262 Score = 215 bits (547), Expect = 1e-54 Identities = 153/520 (29%), Positives = 258/520 (49%), Gaps = 58/520 (11%) Frame = +2 Query: 248 EILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSM--- 418 ++L R +LPV + ++E + + ++ +I+ G TG GKTTQ+PQ++L+ ++R+ Sbjct: 382 QVLIDRESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIRNDRAAQCN 441 Query: 419 VACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDC--SSHKTVLKYLTDGMLLREA 592 + TQP E IG+ GYS+RFE H ++L + T G+LLR+ Sbjct: 442 IVVTQPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASML-FCTVGVLLRKL 500 Query: 593 MADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFS 772 + + +++DE HER + TD L +L++V++ P++++++MSAT++ F YF Sbjct: 501 ESG--IRGISHVIVDEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYFF 558 Query: 773 GAPLMKVPGRLHPVEIFYTQE---------PERDY------------------------- 850 P+++V GR PV+ +Y ++ P RD Sbjct: 559 NCPIIEVFGRTFPVQEYYLEDCIQMTQFIPPPRDKKKKDKDEEGGDDEETNCNLVCGDDY 618 Query: 851 -----------------LEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNN 979 LE + I G +LVFL G I A +K + + Sbjct: 619 GPETRRSMSQLSEKETPLELIEALLKYIETLNVPGAVLVFLPGWNLIY-AMQKHLEMNPH 677 Query: 980 MGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIV 1159 G ++PL+S +P Q+K+FDP P + K+++STNIAETS+TI+ +V Sbjct: 678 FGSH--SYCILPLHSQIPRDEQRKVFDPVPDGII-------KVILSTNIAETSITINDVV 728 Query: 1160 YVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNGDL 1339 YVID K K++ + + SK + QR GRAGR +PG CF L ++ F+ L Sbjct: 729 YVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFD-KL 787 Query: 1340 QPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDE 1513 + PEI R+ L L++K L + + HF ++PP + ++ A L L ALD Sbjct: 788 ETHLTPEIFRTPLHEVALSIKLLRLGGIGHFLSKAIEPPPLDAVIEAEHTLRELDALDSN 847 Query: 1514 GNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISA 1633 LT LG ++++ P++P++ KM++I + + + +ISA Sbjct: 848 DELTPLGRILAKLPIEPRLGKMMIIGCIFYVGDALCTISA 887
>P37024:HRPB_ECOLI ATP-dependent RNA helicase hrpB - Escherichia coli| Length = 809 Score = 211 bits (537), Expect = 1e-53 Identities = 146/458 (31%), Positives = 236/458 (51%), Gaps = 1/458 (0%) Frame = +2 Query: 269 TLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVACTQPXXXX 448 +LPV E L L ++L TG+GK+T +P +L G++ + + +P Sbjct: 3 SLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHPGINGK--IILLEPRRLA 60 Query: 449 XXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPLLERYKVI 628 E ++ G+ VGY +R ++C T L+ +T+G+L R DP L ++ Sbjct: 61 ARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGLV 120 Query: 629 VLDEAHERTLATDVLFGLLKEVLKN-RPDLKLVVMSATLEAEKFQGYFSGAPLMKVPGRL 805 +LDE HER+L D+ LL +V + R DLKL++MSATL+ ++ Q AP++ GR Sbjct: 121 ILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRS 180 Query: 806 HPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNNMG 985 PVE Y P + A+ + + +G +L+FL G EI+ ++ + + Sbjct: 181 FPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLFLPGVGEIQRVQEQLASRIGS-- 238 Query: 986 DQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYV 1165 V + PLY L Q+K PAP + RK+V++TNIAETSLTI+GI V Sbjct: 239 ----DVLLCPLYGALSLNDQRKAILPAPQGM-------RKVVLATNIAETSLTIEGIRLV 287 Query: 1166 IDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNGDLQP 1345 +D + ++PR + L+ +S+AS QRAGRAGR +PG L ++ Sbjct: 288 VDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGISLHLIAKEQAE-RAAA 346 Query: 1346 QTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLT 1525 Q+ PEIL+S+L+ ++ L + G D ++D P L+ A +L LGAL+ E L+ Sbjct: 347 QSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPVVNLLAAKRLLQMLGALEGE-RLS 405 Query: 1526 SLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAML 1639 + G+ M+ DP+++ MLV + + + I+A+L Sbjct: 406 AQGQKMAALGNDPRLAAMLVSAKNDDEAATAAKIAAIL 443
>Q5R874:DHX9_PONPY ATP-dependent RNA helicase A - Pongo pygmaeus (Orangutan)| Length = 1269 Score = 209 bits (532), Expect = 5e-53 Identities = 150/524 (28%), Positives = 256/524 (48%), Gaps = 63/524 (12%) Frame = +2 Query: 251 ILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSM---V 421 IL++R LPV + + E L + N +I+ G TG GKTTQ+PQF+L+ ++R+ + Sbjct: 381 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 440 Query: 422 ACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDC--SSHKTVLKYLTDGMLLREAM 595 TQP E G+ GYS+RFE H +++ + T G+LLR+ Sbjct: 441 VVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIM-FCTVGVLLRKLE 499 Query: 596 ADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSG 775 A + +++DE HER + TD L +L++V++ P++++V+MSAT++ F YF Sbjct: 500 AG--IRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFN 557 Query: 776 APLMKVPGRLHPVEIFYTQE---------PERD--------------------------- 847 P+++V GR +PV+ ++ ++ P +D Sbjct: 558 CPIIEVYGRTYPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDANCNLICGDEYG 617 Query: 848 ------------------YLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEV 973 +EA ++ + +++ G +LVFL G I + + Sbjct: 618 PETRLSMSQLNEKETPFELIEALLKYIETLNV---PGAVLVFLPGWNLIYTMQKHLE--- 671 Query: 974 NNMGDQVGP--VKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTI 1147 M G +++PL+S +P Q+K+FDP P + K+++STNIAETS+TI Sbjct: 672 --MNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVT-------KVILSTNIAETSITI 722 Query: 1148 DGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSF 1327 + +VYVID K K++ + + SK + QR GRAGR +PG CF L + F Sbjct: 723 NDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF 782 Query: 1328 NGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGA 1501 L+ PE+ R+ L L++K L + + F ++PP + ++ A L L A Sbjct: 783 E-RLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDA 841 Query: 1502 LDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISA 1633 LD LT LG ++++ P++P+ KM+++ + + I +I+A Sbjct: 842 LDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAA 885
>Q08211:DHX9_HUMAN ATP-dependent RNA helicase A - Homo sapiens (Human)| Length = 1270 Score = 209 bits (532), Expect = 5e-53 Identities = 150/524 (28%), Positives = 256/524 (48%), Gaps = 63/524 (12%) Frame = +2 Query: 251 ILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSM---V 421 IL++R LPV + + E L + N +I+ G TG GKTTQ+PQF+L+ ++R+ + Sbjct: 381 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 440 Query: 422 ACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDC--SSHKTVLKYLTDGMLLREAM 595 TQP E G+ GYS+RFE H +++ + T G+LLR+ Sbjct: 441 VVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIM-FCTVGVLLRKLE 499 Query: 596 ADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSG 775 A + +++DE HER + TD L +L++V++ P++++V+MSAT++ F YF Sbjct: 500 AG--IRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFN 557 Query: 776 APLMKVPGRLHPVEIFYTQE---------PERD--------------------------- 847 P+++V GR +PV+ ++ ++ P +D Sbjct: 558 CPIIEVYGRTYPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDANCNLICGDEYG 617 Query: 848 ------------------YLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEV 973 +EA ++ + +++ G +LVFL G I + + Sbjct: 618 PETRLSMSQLNEKETPFELIEALLKYIETLNV---PGAVLVFLPGWNLIYTMQKHLE--- 671 Query: 974 NNMGDQVGP--VKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTI 1147 M G +++PL+S +P Q+K+FDP P + K+++STNIAETS+TI Sbjct: 672 --MNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVT-------KVILSTNIAETSITI 722 Query: 1148 DGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSF 1327 + +VYVID K K++ + + SK + QR GRAGR +PG CF L + F Sbjct: 723 NDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF 782 Query: 1328 NGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGA 1501 L+ PE+ R+ L L++K L + + F ++PP + ++ A L L A Sbjct: 783 E-RLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDA 841 Query: 1502 LDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISA 1633 LD LT LG ++++ P++P+ KM+++ + + I +I+A Sbjct: 842 LDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAA 885
>Q28141:DHX9_BOVIN ATP-dependent RNA helicase A - Bos taurus (Bovine)| Length = 1287 Score = 209 bits (532), Expect = 5e-53 Identities = 152/522 (29%), Positives = 249/522 (47%), Gaps = 61/522 (11%) Frame = +2 Query: 251 ILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVAC- 427 +L++R LPV + + E L + N +I+ G TG GKTTQ+PQF+L+ + + N C Sbjct: 378 VLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILD-DCIQNDRAAECN 436 Query: 428 ---TQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDC--SSHKTVLKYLTDGMLLREA 592 TQP E G+ GYS+RFE H +++ + T G+LLR+ Sbjct: 437 IVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIM-FCTVGVLLRKL 495 Query: 593 MADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFS 772 A + +++DE HER + TD L +L++V++ P++++V+MSAT++ F YF Sbjct: 496 EAG--IRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFF 553 Query: 773 GAPLMKVPGRLHPVEIFYTQE---------PERDY------------------------- 850 P+++V GR PV+ ++ ++ P +D Sbjct: 554 NCPIIEVYGRTFPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDANCNLICGDEY 613 Query: 851 -----------------LEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNN 979 E ++ I G +LVFL G I + + Sbjct: 614 GAETRISMAQLNEKETPFELIEALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLE----- 668 Query: 980 MGDQVGP--VKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDG 1153 M G +++PL+S +P Q+K+FDP P + KI++STNIAETS+TI+ Sbjct: 669 MNPHFGSHRYQILPLHSQIPREEQRKVFDPVPSGVT-------KIILSTNIAETSITIND 721 Query: 1154 IVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNG 1333 +VYVID K K++ + + SK + QR GRAGR +PG CF L + F Sbjct: 722 VVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFE- 780 Query: 1334 DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALD 1507 L+ PE+ R+ L L++K L + + F ++PP + ++ A L L ALD Sbjct: 781 RLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALD 840 Query: 1508 DEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISA 1633 LT LG ++++ P++P+ KM+++ + + I +ISA Sbjct: 841 ANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISA 882
>O70133:DHX9_MOUSE ATP-dependent RNA helicase A - Mus musculus (Mouse)| Length = 1380 Score = 208 bits (530), Expect = 9e-53 Identities = 148/522 (28%), Positives = 255/522 (48%), Gaps = 61/522 (11%) Frame = +2 Query: 251 ILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSM---V 421 +L++R LPV + + E L + N +I+ G TG GKTTQ+PQ++L+ ++R+ + Sbjct: 383 VLQERELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECNI 442 Query: 422 ACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDC--SSHKTVLKYLTDGMLLREAM 595 TQP E G+ GYS+RFE H +++ + T G+LLR+ Sbjct: 443 VVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIM-FCTVGVLLRKLE 501 Query: 596 ADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSG 775 A + +++DE HER + TD L +L++V+ P++++V+MSAT++ F YF Sbjct: 502 AG--IRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFN 559 Query: 776 APLMKVPGRLHPVEIFYTQE---------PERD--------------------------- 847 P+++V GR PV+ ++ ++ P +D Sbjct: 560 CPIIEVYGRTFPVQEYFLEDCIQMTQFIPPPKDKKKKDKEDDGGEDDDANCNLICGDEYG 619 Query: 848 ------------------YLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEV 973 +EA ++ + +++ G +LVFL G I + + Sbjct: 620 PETKLSMSQLNEKETPFELIEALLKYIETLNV---PGAVLVFLPGWNLIYTMQKHLE--- 673 Query: 974 NNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDG 1153 NN +++PL+S +P Q+K+FDP P + K+++STNIAETS+TI+ Sbjct: 674 NNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVT-------KVILSTNIAETSITIND 726 Query: 1154 IVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNG 1333 +VYVID K K++ + + SK + QR GRAGR +PG CF L + F+ Sbjct: 727 VVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFD- 785 Query: 1334 DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALD 1507 L+ PE+ R+ L L++K L + + F ++PP + ++ A L L ALD Sbjct: 786 RLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAIIEAEHTLRELDALD 845 Query: 1508 DEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISA 1633 LT LG ++++ P++P+ KM+++ + + + +ISA Sbjct: 846 ANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISA 887
>Q04217:DHR1_YEAST Probable ATP-dependent RNA helicase DHR1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 1267 Score = 179 bits (455), Expect = 5e-44 Identities = 100/238 (42%), Positives = 145/238 (60%) Frame = +2 Query: 929 EEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKI 1108 E+E E+ ++ E D P+ V+PLYS LP Q ++F P R Sbjct: 708 EDEEEEGFEEVLTEGQTAND---PLYVLPLYSLLPTKEQMRVFQKPPQ-------GSRLC 757 Query: 1109 VVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQ 1288 +V+TN+AETSLTI G+ YV+D G SK++ YN V+S V +SKASA+QR+GRAGRT Sbjct: 758 IVATNVAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTG 817 Query: 1289 PGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLM 1468 PG C+RLY+ F D + + PEILR + + VL +K + I ++++F F PP L Sbjct: 818 PGHCYRLYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALS 877 Query: 1469 RALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 +A+++L YLGALD++ +T G+ MS FPL P+ SKML++S C I++I + LS Sbjct: 878 KAIQLLQYLGALDNKEMITEDGKKMSLFPLSPRFSKMLLVSDEKACLPYIVAIVSALS 935 Score = 159 bits (401), Expect = 8e-38 Identities = 95/261 (36%), Positives = 139/261 (53%), Gaps = 20/261 (7%) Frame = +2 Query: 248 EILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEA-----EGLSNR 412 EI + R LPV+ ++ + + + N +I+ GETGSGKTTQ+PQF+ EA + Sbjct: 383 EIQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYP 442 Query: 413 SMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREA 592 MV TQP E+ G +VGY IRF+ + T +K++TDG+LLRE Sbjct: 443 GMVGITQPRRVAAVSMAERVANELG-DHGHKVGYQIRFDSTAKEDTKVKFMTDGVLLREM 501 Query: 593 MADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNR-----------PDLKLVVMSAT 739 M D L +Y I++DEAHER + TD+L G+L ++ R LKL++MSAT Sbjct: 502 MHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMSAT 561 Query: 740 LEAEKFQG----YFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGD 907 L F + P+++V R PV I + + +Y + A R +IH P G Sbjct: 562 LRVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQKLPPGA 621 Query: 908 ILVFLTGEEEIEDACRKINKE 970 ILVFLTG++EI +++ KE Sbjct: 622 ILVFLTGQQEITHMVKRLRKE 642
>Q8IY37:DHX37_HUMAN Probable ATP-dependent RNA helicase DHX37 - Homo sapiens (Human)| Length = 1157 Score = 171 bits (433), Expect = 2e-41 Identities = 98/249 (39%), Positives = 147/249 (59%), Gaps = 9/249 (3%) Frame = +2 Query: 248 EILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVAC 427 E+ E+R LP+ ++ + + ++ +I+ GETGSGKTTQ+PQF+ EA S S++ Sbjct: 244 EMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGV 303 Query: 428 TQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPL 607 T+P +EM+++ V Y IR+E + +T +K++TDG+LL+E D L Sbjct: 304 TEPRRVAAVAMSQRVAKEMNLS-QRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFL 362 Query: 608 LERYKVIVLDEAHERTLATDVLFGLLKEVL----KNRPDLKLVVMSATLEAEKF----QG 763 L RYKV+++DEAHER++ TD+L GLL ++ K LKL++MSATL E F + Sbjct: 363 LLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRL 422 Query: 764 YFSGAPLMKVPGRLHPVEI-FYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEI 940 + P++KV R PV + F + P DY R V +IH PAG ILVFLTG+ E+ Sbjct: 423 FAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEV 482 Query: 941 EDACRKINK 967 CR++ K Sbjct: 483 HALCRRLRK 491 Score = 154 bits (389), Expect = 2e-36 Identities = 93/230 (40%), Positives = 135/230 (58%), Gaps = 15/230 (6%) Frame = +2 Query: 998 PVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPG 1177 P+ V+PLYS L P Q ++F P P EG R VV+TN+AETSLTI GI YV+D G Sbjct: 587 PLHVLPLYSLLAPEKQAQVFKPPP----EGT---RLCVVATNVAETSLTIPGIKYVVDCG 639 Query: 1178 FSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYP 1357 K++ Y+ V S V+ +S+ASA QRAGRAGRT+PG C+RLY+ F GD + P Sbjct: 640 KVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVF-GDFEQFPPP 698 Query: 1358 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGN------ 1519 EI R + + +L +K L ++ +++F F PP+ E L+ A E+L LGAL Sbjct: 699 EITRRPVEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQ 758 Query: 1520 ---------LTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 +T+LG M+ FP+ P+ +KML +S ++ C ++I A ++ Sbjct: 759 LQENRLSCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMT 808 Score = 42.4 bits (98), Expect = 0.011 Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 15/159 (9%) Frame = +1 Query: 2089 GDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMKSADNVRQQLVRIMTRF--------NL 2244 GD + LL A + + P +C N + +AM +R QL + + Sbjct: 853 GDLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEIRRLRGQLTTAVNAVCPEAELFVDP 912 Query: 2245 KMCSTDFNSREYYVNIRKAMLSGYFMQVAHLERT------GHYLTVKDNQVVHLHPSNCM 2406 KM + Y I A L + + E Y T + V +HPS+ + Sbjct: 913 KMQPPTESQVTYLRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFIHPSSVL 972 Query: 2407 DHK-PEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQY 2520 + PE+V+Y E V TT+ +++ V+ + +W+ + P Y Sbjct: 973 FKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSY 1011
>O46072:KZ_DROME Probable ATP-dependent RNA helicase kurz - Drosophila melanogaster| (Fruit fly) Length = 1192 Score = 168 bits (425), Expect = 1e-40 Identities = 96/251 (38%), Positives = 143/251 (56%), Gaps = 8/251 (3%) Frame = +2 Query: 239 RYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSM 418 R E+ R LP+ ++ + + + +N +I+ GETGSGKTTQ+PQF+ EA G + M Sbjct: 249 RTTEVQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEA-GYAQHKM 307 Query: 419 VACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMA 598 + T+P EM++ EV Y IRFE + T +K++TDG+LL+E Sbjct: 308 IGVTEPRRVAAIAMSKRVAHEMNLP-ESEVSYLIRFEGNVTPATRIKFMTDGVLLKEIET 366 Query: 599 DPLLERYKVIVLDEAHERTLATDVLFGLLKEVL----KNRPDLKLVVMSATLEAEKF--- 757 D LL +Y VI+LDEAHER++ TD+L GLL ++ K LKL++MSATL F Sbjct: 367 DFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATLRVSDFTEN 426 Query: 758 -QGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEE 934 + + PL+KV R PV I + + DY+ A R ++IH P G IL+F+TG++ Sbjct: 427 TRLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHNKLPEGGILIFVTGQQ 486 Query: 935 EIEDACRKINK 967 E+ RK+ + Sbjct: 487 EVNQLVRKLRR 497 Score = 140 bits (353), Expect = 3e-32 Identities = 94/247 (38%), Positives = 129/247 (52%), Gaps = 8/247 (3%) Frame = +2 Query: 926 GEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRK 1105 G EE D + E Q P+ V+PLYS L Q +IF P P R Sbjct: 592 GLEEDNDDELGLEDESGMGSGQRQPLWVLPLYSLLSSEKQNRIFLPVPDGC-------RL 644 Query: 1106 IVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRT 1285 VVSTN+AETSLTI I YV+D G K ++Y+ V + +V+ SKASA QRAGRAGR Sbjct: 645 CVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRI 704 Query: 1286 QPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETL 1465 G C+RLY+ +N + + P+I + + + +L ++ +GID +VHF F PP L Sbjct: 705 SAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQL 764 Query: 1466 MRALEVLNYLGAL--------DDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEIL 1621 A L LGAL D +T LG ++S FP+ P+ KML +S + N + Sbjct: 765 QAAERRLIVLGALEVAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTV 824 Query: 1622 SISAMLS 1642 + A LS Sbjct: 825 CLVAALS 831 Score = 37.0 bits (84), Expect = 0.48 Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 34/176 (19%) Frame = +1 Query: 2089 GDHLTLLNVYHAYKQNNED---PTWCYENFVNARAMKSADNVRQQLVRIMTRFNLKMCS- 2256 GD + LL A + P +C N + +AM VR+ V++ NL + Sbjct: 871 GDPMVLLRAVGAAEYAGSQGRLPEFCAANGLRQKAMSE---VRKLRVQLTNEINLNVSDV 927 Query: 2257 -----------TDFNSREYYVNIRKAMLSGYFMQVAHL------------ERTGHYLTVK 2367 TD +R +R+ +L+G +VA R + Sbjct: 928 ELGVDPELKPPTDAQARF----LRQILLAGMGDRVARKVPLADIADKEERRRLKYAYNCA 983 Query: 2368 D-NQVVHLHPSNCMDHK-PEWVIYNE-YVL----TTRNFIRTVTDIRGEWLIDIAP 2514 D + LH S+ + K PEWVIY E Y L +T+ FIR +T I EWL+ P Sbjct: 984 DMEEPAFLHVSSVLRQKAPEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYVP 1039
>Q14147:DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 - Homo sapiens (Human)| Length = 576 Score = 159 bits (403), Expect = 5e-38 Identities = 82/200 (41%), Positives = 123/200 (61%) Frame = +2 Query: 239 RYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSM 418 R ++ +R LP+ Q + L+ L+++Q +++ G+TG GK+TQ+PQ++L A G S+ Sbjct: 151 RLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAA-GFSH--- 206 Query: 419 VACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMA 598 VACTQP E G +VGY IRFE S T + +LT G+LLR+ Sbjct: 207 VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQR 266 Query: 599 DPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGA 778 +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+++MSAT+ F YFS A Sbjct: 267 EPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNA 326 Query: 779 PLMKVPGRLHPVEIFYTQEP 838 P+++VPGRL P+ +F P Sbjct: 327 PVVQVPGRLFPITVFDVAPP 346 Score = 157 bits (398), Expect = 2e-37 Identities = 94/239 (39%), Positives = 135/239 (56%), Gaps = 2/239 (0%) Frame = +2 Query: 1052 IFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLV 1231 +FD APP + RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ +++ L Sbjct: 340 VFDVAPPGV-------RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQE 392 Query: 1232 SPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLG 1411 IS+ASA QR GRAGRT PG CFRLY E ++ P PEI R L + VL +K + Sbjct: 393 FWISQASAEQRKGRAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDSLVLQMKSMS 451 Query: 1412 IDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVIS 1591 + D F F++PP P +L A+ L GALD LT +G ++++ P+D + KML++ Sbjct: 452 VGDPRTFPFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILG 511 Query: 1592 PRYNCSNEILSISAMLSGMSTNNFSL*IPFLQLHYHVVICCT--CTVLLAPVCASKLPW 1762 ++ +L+I+A LS S PF + CCT + L AP C + W Sbjct: 512 SMFSLVEPVLTIAAALSVQS--------PFTRSAQSSPECCTPPASSLAAPRCCTHRSW 562
>P34305:RHA2_CAEEL Putative ATP-dependent RNA helicase rha-2 - Caenorhabditis elegans| Length = 1148 Score = 155 bits (392), Expect = 9e-37 Identities = 90/252 (35%), Positives = 140/252 (55%), Gaps = 9/252 (3%) Frame = +2 Query: 239 RYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSM 418 R EI + R LP++ ++ + + +N ++ GETGSGKTTQIPQF+ EA S + Sbjct: 225 RSKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEGEL 284 Query: 419 VACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMA 598 + T+P E+ +EV Y IR+E S T + ++TDG+L++E Sbjct: 285 IGITEPRRVAAIAMAQRVGVELAKP--DEVSYQIRYEGTRSETTNILFMTDGVLMKEMEQ 342 Query: 599 DPLLERYKVIVLDEAHERTLATDVLFGLLKEVL----KNRPDLKLVVMSATLEAEKFQGY 766 D +L++Y VI++DEAHER++ +DVL G+L ++ K L+LV+MSATL + F + Sbjct: 343 DVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRLDDFT-H 401 Query: 767 FSGAPLM-----KVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGE 931 PL+ KV R PV + + + DY+ +A R +IH P G ILVF+TG+ Sbjct: 402 KKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTCRIHETLPPGAILVFVTGQ 461 Query: 932 EEIEDACRKINK 967 E++ K+ K Sbjct: 462 HEVKQLITKLKK 473 Score = 134 bits (337), Expect = 2e-30 Identities = 88/257 (34%), Positives = 131/257 (50%), Gaps = 7/257 (2%) Frame = +2 Query: 893 EPAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPP 1072 E D F G+ ++ D K+ + P+ +PLYS L Q+++FD P Sbjct: 541 EAFDDYEEFENGDGDLSDG--KVENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETPA 598 Query: 1073 PLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKAS 1252 + R V+STN+AETSLTI G+ YVID GF K+++Y+ V V IS+AS Sbjct: 599 GM-------RLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQAS 651 Query: 1253 AHQRAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 1432 QRAGRAGR G +RLY+ + D PEIL VL LK + I +V+F Sbjct: 652 GDQRAGRAGRISAGHAYRLYSSAVYQ-DFVKFADPEILSKPADQLVLHLKSMNIVKVVNF 710 Query: 1433 DFMDPPAPETLMRALEVLNYLGALDD-------EGNLTSLGEMMSEFPLDPQMSKMLVIS 1591 F P + L A + L LGAL + E +T LG+ ++ FPL P +K + ++ Sbjct: 711 PFPSAPDEQMLESAEKRLCRLGALSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIAMA 770 Query: 1592 PRYNCSNEILSISAMLS 1642 ++N + + + ++LS Sbjct: 771 DQHNLMSHAILLISLLS 787
>Q6P158:DHX57_HUMAN Putative ATP-dependent RNA helicase DHX57 - Homo sapiens (Human)| Length = 1386 Score = 154 bits (390), Expect = 2e-36 Identities = 80/207 (38%), Positives = 123/207 (59%), Gaps = 6/207 (2%) Frame = +2 Query: 233 SARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLE------A 394 S ++ IL++R++LP W++++ L +LR +Q +++ G TG GKTTQIPQF+L+ Sbjct: 531 SRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPP 590 Query: 395 EGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDG 574 E ++N + CTQP +E +G VGY IR E S T L Y T G Sbjct: 591 EKVAN---IICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTG 647 Query: 575 MLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK 754 +LLR D L+ I++DE HERT +D L +LK+++ RP L++++MSATL AE Sbjct: 648 VLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAEL 707 Query: 755 FQGYFSGAPLMKVPGRLHPVEIFYTQE 835 F YF+ P++ +PGR PV+ F+ ++ Sbjct: 708 FSDYFNSCPVITIPGRTFPVDQFFLED 734 Score = 136 bits (343), Expect = 4e-31 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 5/271 (1%) Frame = +2 Query: 845 DYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYS 1024 + +EA + +V P G ILVFL G EI+ ++ + + PL+S Sbjct: 829 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHS 888 Query: 1025 TLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNP 1204 +L QQ +F P + KI++STNIAETS+TID +VYVID G K+K Y+ Sbjct: 889 SLSSEEQQAVFVKPPAGVT-------KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 941 Query: 1205 RIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLAN 1384 +ESL + +S+A+A QR GRAGR G CF L+T +N L Q PEI R L Sbjct: 942 SKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQ 1001 Query: 1385 TVLTLKKLGIDDL-----VHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSE 1549 L +K L + V ++PP ++L + L LGAL + LT LG ++ Sbjct: 1002 LCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLAS 1061 Query: 1550 FPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 P+D ++ K+++ + C + L+I+A L+ Sbjct: 1062 LPVDVRIGKLMLFGSIFRCLDPALTIAASLA 1092
>Q9H2U1:DHX36_HUMAN Probable ATP-dependent RNA helicase DHX36 - Homo sapiens (Human)| Length = 1008 Score = 154 bits (390), Expect = 2e-36 Identities = 98/281 (34%), Positives = 153/281 (54%), Gaps = 4/281 (1%) Frame = +2 Query: 812 VEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNNMGDQ 991 V++ E ++ L + + I + E G ILVFL G + I + +V D+ Sbjct: 459 VDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDK 518 Query: 992 VGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVID 1171 ++PL+S +P Q ++F PP + RKIV++TNIAETS+TID +VYVID Sbjct: 519 F---LIIPLHSLMPTVNQTQVFKRTPPGV-------RKIVIATNIAETSITIDDVVYVID 568 Query: 1172 PGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYT--EKSFNGDLQP 1345 G K+ ++ + + ++ +SKA+A QR GRAGR QPG C+ LY S D Q Sbjct: 569 GGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQ- 627 Query: 1346 QTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDEGN 1519 PEILR+ L L +K L + + +F MDPP+ E ++ ++ L L ALD + Sbjct: 628 --LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEE 685 Query: 1520 LTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 LT LG ++ P++P + KM++ + C + +L+I+A LS Sbjct: 686 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLS 726 Score = 129 bits (323), Expect = 9e-29 Identities = 73/198 (36%), Positives = 107/198 (54%), Gaps = 6/198 (3%) Frame = +2 Query: 239 RYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLE---AEGLSN 409 RY+E+ R LP + + E + ++ ++Q ++ GETG GKTTQ+ QF+L+ G + Sbjct: 196 RYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGS 255 Query: 410 RSMVACTQPXXXXXXXXXXXXXEEMDVTIGE--EVGYSIRFEDCSSHKT-VLKYLTDGML 580 + CTQP E + G GY IR + K + Y T G++ Sbjct: 256 ACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGII 315 Query: 581 LREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQ 760 L+ +DP L IVLDE HER L +DVL ++K++L R DLK+++MSATL AEKF Sbjct: 316 LQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFS 375 Query: 761 GYFSGAPLMKVPGRLHPV 814 YF P++ +PG PV Sbjct: 376 EYFGNCPMIHIPGFTFPV 393
>Q8VHK9:DHX36_MOUSE Probable ATP-dependent RNA helicase DHX36 - Mus musculus (Mouse)| Length = 1001 Score = 152 bits (385), Expect = 6e-36 Identities = 97/281 (34%), Positives = 153/281 (54%), Gaps = 4/281 (1%) Frame = +2 Query: 812 VEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNNMGDQ 991 V++ + ++ L + I + E G ILVFL G + I + +V D+ Sbjct: 452 VDVLQMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDK 511 Query: 992 VGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVID 1171 ++PL+S +P Q ++F PP + RKIV++TNIAETS+TID +VYVID Sbjct: 512 F---LIIPLHSLMPTVNQTQVFKKTPPGV-------RKIVIATNIAETSITIDDVVYVID 561 Query: 1172 PGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYT--EKSFNGDLQP 1345 G K+ ++ + + ++ +SKA+A QR GRAGR QPG C+ LY S D Q Sbjct: 562 GGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQ- 620 Query: 1346 QTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDEGN 1519 PEILR+ L L +K L + + +F MDPP+ E ++ +++ L L ALD + Sbjct: 621 --LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEE 678 Query: 1520 LTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 LT LG ++ P++P + KM++ + C + +L+I+A LS Sbjct: 679 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLS 719 Score = 127 bits (318), Expect = 4e-28 Identities = 72/198 (36%), Positives = 107/198 (54%), Gaps = 6/198 (3%) Frame = +2 Query: 239 RYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLE---AEGLSN 409 RY+E+ R+ LP + + E + ++ ++Q ++ GETG GKTTQ+ QF+L+ G + Sbjct: 189 RYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGKGS 248 Query: 410 RSMVACTQPXXXXXXXXXXXXXEEMDVTIGE--EVGYSIRFEDCSSHKT-VLKYLTDGML 580 + CTQP E + G GY IR + K + Y T G++ Sbjct: 249 ACRIVCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGII 308 Query: 581 LREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQ 760 L+ +D L IVLDE HER L +DVL ++K++L R DLK+++MSATL AEKF Sbjct: 309 LQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFS 368 Query: 761 GYFSGAPLMKVPGRLHPV 814 YF P++ +PG PV Sbjct: 369 EYFGNCPMIHIPGFTFPV 386
>Q6PGC1:DHX29_MOUSE Putative ATP-dependent RNA helicase DHX29 - Mus musculus (Mouse)| Length = 1365 Score = 150 bits (378), Expect = 4e-35 Identities = 76/208 (36%), Positives = 126/208 (60%), Gaps = 9/208 (4%) Frame = +2 Query: 239 RYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEA----EGLS 406 +Y +L++R+ LPV++ +D + L+ ++ +++ GETGSGK+TQ+P F+LE E + Sbjct: 560 KYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDECGA 619 Query: 407 NRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEE-----VGYSIRFEDCSSHKTVLKYLTD 571 + + CTQP EE+ G GY IR E +S T L Y T Sbjct: 620 RKCNIVCTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYCTT 679 Query: 572 GMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAE 751 G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R DL L++MSAT++++ Sbjct: 680 GVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSD 739 Query: 752 KFQGYFSGAPLMKVPGRLHPVEIFYTQE 835 KF YF+ P++++ GR +PVE+F+ ++ Sbjct: 740 KFSTYFTHCPILRISGRSYPVEVFHLED 767 Score = 131 bits (329), Expect = 2e-29 Identities = 86/253 (33%), Positives = 140/253 (55%), Gaps = 3/253 (1%) Frame = +2 Query: 902 GDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLK 1081 G +L+FL G I+ ++ + ++ +V+ L+S L Q F PP + Sbjct: 867 GAVLIFLPGLAHIQQLYDLLSSDRRFYSERY---QVIALHSVLSTQDQAAAFMFPPPGV- 922 Query: 1082 EGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQ 1261 RKIV++TNIAET +TI +V+VID G +K+ Y+ ++ SL+ + +SKASA Q Sbjct: 923 ------RKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQ 976 Query: 1262 RAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKK--LGIDDLVHFD 1435 R GRAGR + G CFRLYT + F G L + PEILR L L + K LG + Sbjct: 977 RQGRAGRVRDGFCFRLYTRERFEGFLD-YSVPEILRVPLEELCLHIMKCDLGSPEDFLSK 1035 Query: 1436 FMDPPAPETLMRALEVLNYLGALD-DEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSN 1612 +DPP + + A+ +L +GA + +E LT LG+ ++ P++ ++ KML+ + C Sbjct: 1036 ALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLE 1095 Query: 1613 EILSISAMLSGMS 1651 + +++A+++ S Sbjct: 1096 PVATLAAVMTEKS 1108 Score = 45.4 bits (106), Expect = 0.001 Identities = 37/175 (21%), Positives = 72/175 (41%), Gaps = 23/175 (13%) Frame = +1 Query: 2023 FLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP------TWCYENFVNARA 2184 F+ P + AD AK+ D DHLT+ N Y +K+ ++ ++C NF+N + Sbjct: 1110 FITPIGRKDEADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTS 1169 Query: 2185 MKSADNVRQQLVRIMTRFNLKMC-STDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLT 2361 + + ++V+Q+L++++ S + ++ + L + + G + Sbjct: 1170 LLTLEDVKQELMKLVKAAGFSSSPSWEGRKGPQTLSFQDIALLKAVLAAGLYDSVGKIMC 1229 Query: 2362 VKDNQV--------------VHLHPSNCMDHKPE--WVIYNEYVLTTRNFIRTVT 2478 K V +HPS+ W++Y E V TR ++R T Sbjct: 1230 TKSVDVTEKLACMVETAQGKAQVHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETT 1284
>Q7Z478:DHX29_HUMAN Putative ATP-dependent RNA helicase DHX29 - Homo sapiens (Human)| Length = 1369 Score = 150 bits (378), Expect = 4e-35 Identities = 75/208 (36%), Positives = 127/208 (61%), Gaps = 9/208 (4%) Frame = +2 Query: 239 RYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEA----EGLS 406 +Y ++L++R+ LPV++ +D + L+ ++ +++ GETGSGK+TQ+P F+LE E + Sbjct: 561 KYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEA 620 Query: 407 NRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEE-----VGYSIRFEDCSSHKTVLKYLTD 571 ++ + CTQP +E+ G GY IR E + T L Y T Sbjct: 621 SKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTT 680 Query: 572 GMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAE 751 G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R DL L++MSAT+++E Sbjct: 681 GVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSE 740 Query: 752 KFQGYFSGAPLMKVPGRLHPVEIFYTQE 835 KF YF+ P++++ GR +PVE+F+ ++ Sbjct: 741 KFSTYFTHCPILRISGRSYPVEVFHLED 768 Score = 132 bits (333), Expect = 6e-30 Identities = 84/253 (33%), Positives = 139/253 (54%), Gaps = 3/253 (1%) Frame = +2 Query: 902 GDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLK 1081 G +L+FL G I+ ++ + ++ KV+ L+S L Q F PP + Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSNDRRFYSERY---KVIALHSILSTQDQAAAFTLPPPGV- 923 Query: 1082 EGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQ 1261 RKIV++TNIAET +TI +V+VID G +K+ Y+ ++ SL+ + +SKASA Q Sbjct: 924 ------RKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQ 977 Query: 1262 RAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--D 1435 R GRAGR + G CFR+YT + F G + PEILR L L + K + F Sbjct: 978 RQGRAGRVRDGFCFRMYTRERFEG-FMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSK 1036 Query: 1436 FMDPPAPETLMRALEVLNYLGALD-DEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSN 1612 +DPP + + A+ +L +GA + +E LT LG+ ++ P++ ++ KML+ + C + Sbjct: 1037 ALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLD 1096 Query: 1613 EILSISAMLSGMS 1651 + +++A+++ S Sbjct: 1097 PVATLAAVMTEKS 1109 Score = 48.1 bits (113), Expect = 2e-04 Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 26/178 (14%) Frame = +1 Query: 2023 FLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP------TWCYENFVNARA 2184 F P + AD AK+ D DHLT+ N Y +K+ ++ T+C NF+N + Sbjct: 1111 FTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTS 1170 Query: 2185 MKSADNVRQQLVRIM--TRFNLKMCSTDF--NSREYYVNIRKAMLSGYFMQVAHLERTGH 2352 + + ++V+Q+L++++ F+ ST + N ++ ++ L + + G Sbjct: 1171 LLTLEDVKQELIKLVKAAGFSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGK 1230 Query: 2353 YLTVKDNQV--------------VHLHPS--NCMDHKPEWVIYNEYVLTTRNFIRTVT 2478 + K V +HPS N W++Y E + R ++R T Sbjct: 1231 IIYTKSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTHGWLLYQEKIRYARVYLRETT 1288
>Q6P5D3:DHX57_MOUSE Putative ATP-dependent RNA helicase DHX57 - Mus musculus (Mouse)| Length = 1388 Score = 145 bits (367), Expect = 7e-34 Identities = 78/204 (38%), Positives = 120/204 (58%), Gaps = 3/204 (1%) Frame = +2 Query: 233 SARYLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLE--AEGLS 406 S ++ IL++R+ LP W++++ L++L +Q +++ G TG GKTTQIPQF+L+ G Sbjct: 532 SRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPP 591 Query: 407 NR-SMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLL 583 R + + CTQP +E +G VGY IR E S T L Y T G+LL Sbjct: 592 ERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLL 651 Query: 584 REAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 763 R D L+ I++DE HERT +D L +LK+++ R L++++MSATL+A F Sbjct: 652 RRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSK 711 Query: 764 YFSGAPLMKVPGRLHPVEIFYTQE 835 YFS P++ +PGR PV+ F+ ++ Sbjct: 712 YFSYCPVITIPGRAFPVDQFFLED 735 Score = 136 bits (342), Expect = 6e-31 Identities = 93/271 (34%), Positives = 142/271 (52%), Gaps = 5/271 (1%) Frame = +2 Query: 845 DYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYS 1024 + +EA + +V P G +LVFL G EI+ ++ + + PL+S Sbjct: 831 ELIEALLEWIVDGKHAYPPGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 890 Query: 1025 TLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNP 1204 +L QQ +F PP+ KI++STNIAETS+TID +VYVID G K+K Y+ Sbjct: 891 SLSSEEQQAVF--VKPPM-----GVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 943 Query: 1205 RIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLAN 1384 +ESL + +S+A+A QR GRAGR G CF L+T +N L Q PEI R L Sbjct: 944 GKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQ 1003 Query: 1385 TVLTLKKLGIDDL-----VHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSE 1549 L +K L + V ++PP ++L + L LGAL + LT LG ++ Sbjct: 1004 LCLRIKILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLAS 1063 Query: 1550 FPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 P+D ++ K++++ + C + L+I+A L+ Sbjct: 1064 LPVDVRIGKLMLLGSIFRCLDPALTIAASLA 1094
>P24785:MLE_DROME Dosage compensation regulator - Drosophila melanogaster (Fruit fly)| Length = 1293 Score = 140 bits (354), Expect = 2e-32 Identities = 96/289 (33%), Positives = 154/289 (53%), Gaps = 4/289 (1%) Frame = +2 Query: 902 GDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLK 1081 G ILVFL G I A K + N GD +++P +S +P Q+K+F+P P + Sbjct: 654 GAILVFLPGWNLIF-ALMKFLQNTNIFGD-TSQYQILPCHSQIPRDEQRKVFEPVPEGVT 711 Query: 1082 EGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQ 1261 KI++STNIAETS+TID IV+VID ++ K++ + S SK + Q Sbjct: 712 -------KIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQ 764 Query: 1262 RAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--D 1435 R GRAGR +PG CF L + F L+ PE+ R+ L LT+K L + + HF Sbjct: 765 RKGRAGRVRPGFCFTLCSRARFQA-LEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSK 823 Query: 1436 FMDPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNE 1615 ++PP + ++ A +L + LD LT LG +++ P++P++ KM+V+ + C+ + Sbjct: 824 ALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCA-D 882 Query: 1616 ILSISAMLSGMSTNNFSL*IPFLQL--HYHVVICCTCTVLLAPVCASKL 1756 +++I A S + FSL I +L H + C+ +A + AS++ Sbjct: 883 LMAIMASYSSTFSEVFSLDIGQRRLANHQKALSGTKCSDHVAMIVASQM 931 Score = 123 bits (308), Expect = 5e-27 Identities = 70/202 (34%), Positives = 109/202 (53%), Gaps = 4/202 (1%) Frame = +2 Query: 242 YLEILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLE---AEGLSNR 412 Y + LE R LP+ + E L + DN +I+ G TG GKTTQI Q++L+ G Sbjct: 374 YRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGY 433 Query: 413 SMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKT-VLKYLTDGMLLRE 589 + + TQP E +G+ VGYS+RFE + + T G+LLR+ Sbjct: 434 ANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRK 493 Query: 590 AMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYF 769 A L I++DE HER + +D L +L++++ PDL +++MSAT++ KF YF Sbjct: 494 LEAG--LRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYF 551 Query: 770 SGAPLMKVPGRLHPVEIFYTQE 835 P+++VPGR PV+ F+ ++ Sbjct: 552 GICPVLEVPGRAFPVQQFFLED 573
>Q22307:DHX9_CAEEL Probable ATP-dependent RNA helicase A - Caenorhabditis elegans| Length = 1301 Score = 127 bits (319), Expect = 3e-28 Identities = 84/249 (33%), Positives = 132/249 (53%), Gaps = 2/249 (0%) Frame = +2 Query: 902 GDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLK 1081 G +LVFL G EI C ++ E G Q +++PL+S L Q+K+F+ P Sbjct: 660 GAVLVFLPGWAEIMTLCNRL-LEHQEFG-QANKYEILPLHSQLTSQEQRKVFNHYP---- 713 Query: 1082 EGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQ 1261 RKI+VSTNIAETS+TID +VYVID +K+++Y + SK + Q Sbjct: 714 ----GKRKIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQ 769 Query: 1262 RAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--D 1435 R GRAGR + G F L ++ F L E+LR L LT+K L + + F Sbjct: 770 RRGRAGRVRAGYAFHLCSKMRFEA-LDDHGTAEMLRIPLHQIALTIKLLRLGSVGEFLGK 828 Query: 1436 FMDPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNE 1615 + PP + ++ + VL +GALD LTSLG+M++ P++P ++K+L++ + Sbjct: 829 ALQPPPYDMVVESEAVLQAMGALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSV 888 Query: 1616 ILSISAMLS 1642 + +++ +S Sbjct: 889 MCDVASAMS 897 Score = 104 bits (259), Expect = 2e-21 Identities = 64/208 (30%), Positives = 113/208 (54%), Gaps = 12/208 (5%) Frame = +2 Query: 248 EILEKRRTLPVWQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEA-----EGLSNR 412 +I +R LPV Q ++ ++ + +N+ ++ GETG GK+TQ+ QF+LE+ G S Sbjct: 373 KITAQRGELPVAQYRENIVQTVAENRVTLIKGETGCGKSTQVAQFLLESFLENSNGASFN 432 Query: 413 SMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKT-VLKYLTDGMLLRE 589 ++V+ QP E +GE GY++RF+ + + + T G+LLR Sbjct: 433 AVVS--QPRRISAISLAERVANERGEEVGETCGYNVRFDSATPRPYGSIMFCTVGVLLR- 489 Query: 590 AMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYF 769 M + L +++DE HER + TD + +L+E++ DL++V+MSAT++ + F +F Sbjct: 490 -MMENGLRGISHVIIDEIHERDVDTDFVLIVLREMISTYRDLRVVLMSATIDTDLFTNFF 548 Query: 770 SG------APLMKVPGRLHPVEIFYTQE 835 S P++ + GR PV+ FY ++ Sbjct: 549 SSIPDVGPTPVITMHGRTFPVQSFYLED 576
>Q5UR20:YR366_MIMIV Putative ATP-dependent RNA helicase R366 - Mimivirus| Length = 1766 Score = 117 bits (294), Expect = 2e-25 Identities = 114/477 (23%), Positives = 203/477 (42%), Gaps = 102/477 (21%) Frame = +2 Query: 281 WQQKDEFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAEGL---SNRSMVACTQPXXXXX 451 W + F +N+ L + G TG GK+TQ+P+ ++ ++ + ++ + CTQP Sbjct: 649 WVSQLNFYHHYSNNRVLYITGATGVGKSTQVPKLLMYSQKMLDYNSNGKIICTQPRVPPT 708 Query: 452 XXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTV------------------------LK 559 E D TI E+G IR + K+V L+ Sbjct: 709 V-------ENAD-TISRELGVPIRAYNKLYDKSVFTSNFYVQYKHQKEEHIDRQADYFLR 760 Query: 560 YLTDGMLLREAMADPLLER--------------------------YKVIVLDEAHERTLA 661 +TDG LL E + P L R Y ++++DEAHE Sbjct: 761 IVTDGTLLEEMIGSPFLTRSIEDPYAVDNLGNQLDWVKTYSTGNVYDIVIVDEAHEHNAN 820 Query: 662 TDVLFGLLKEVLKNRPDLKLVVMSATLEAEK--FQGYFSGA------PLM---------- 787 D++ L ++ + KLV++SAT++ ++ ++ Y+ PL Sbjct: 821 MDMILTLARDSIYVNNSTKLVIVSATMDDDEPIYRRYYRRINDNRTYPLSAFIDYNQLDR 880 Query: 788 -KVPGRLH----------PVEIFYTQEPE------RDYLEAAIRTVVQIHMCEPAGDILV 916 + R+H + FY + E +++++ I+ +++ GDIL+ Sbjct: 881 ANMDRRIHISPPGATTQYVIRDFYLTDEESALINEKNFIDYGIKKTIELANSTTNGDILL 940 Query: 917 FLTGEEEIEDACRKINKEV----------NNMGDQVGPVKVVPLYSTLPPAMQQKI-FDP 1063 F+TG+ +I + + IN + + ++ + +V ++ TL + K + Sbjct: 941 FMTGQADIHKSIKAINAATPPNIVALGYYSELSEETKEL-IVKIHQTLASYTRYKEDVEL 999 Query: 1064 APPPLKEGGPAG---RKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVS 1234 + P G R I+++TN+AE S+T+ + YV+D G++K VY+P V Sbjct: 1000 DESEITRRVPKGTYTRAIIIATNVAEASITLKNLKYVVDTGYNKVVVYDPIDGVYDTWTL 1059 Query: 1235 PISKASAHQRAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKK 1405 PIS +SA QR GR GR G + LY S N + +T +I N+ +T++ L K Sbjct: 1060 PISFSSAMQRRGRVGRLSSGDFYALY---SLNKVINNKTAYKIADINIKDTMVKLIK 1113
>Q98218:NTP2_MCV1 Nucleoside triphosphatase II - Molluscum contagiosum virus subtype 1| (MOCV) (MCVI) Length = 684 Score = 63.5 bits (153), Expect = 5e-09 Identities = 84/309 (27%), Positives = 132/309 (42%), Gaps = 18/309 (5%) Frame = +2 Query: 626 IVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLE--AEKFQGYFSGAPLMKVPG 799 ++LDE HE D++ +L+ V + R D +V+MSATLE E+ Q +F A + +PG Sbjct: 305 VILDEVHEHDQMADIMLAVLR-VHRARVD-SIVLMSATLEDDRERLQEFFPDAEFVHIPG 362 Query: 800 ----RLHPVEIFYTQEPE--RDYLEAAIRTV---VQIHMCEPAGDILVFLTGEEEIEDAC 952 + V + + +P R Y E R V + H ++F+ + ED Sbjct: 363 STRFEIRGVYVRNSSDPRDARAYDEEERRNVSAALSAHRPRAGRCGILFVASVAQCEDYA 422 Query: 953 RKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAE 1132 R + +E +G V VV + A+ +++ A P ++VST E Sbjct: 423 RLLTREHPELG-----VYVVHGKTPNVDALLAEVYASARP----------CVLVSTPYLE 467 Query: 1133 TSLTIDGIVYVIDPGFSKQKVYNPR-IRVESLLVSPISKASAHQRAGRAGRTQPGKCFRL 1309 +S+TI + +V D G +V+ P +L+SP A QR GR GR PG Sbjct: 468 SSVTIRTVTHVYDTG----RVFVPAPFGGRQMLISP---AMRTQRRGRVGRVMPGTYVYF 520 Query: 1310 YTEKSFNGDLQPQTYPEILRSN---LANTVLTLKKLGI---DDLVHFDFMDPPAPETLMR 1471 Y P I R + L N ++ + G+ DDL ++ P E L R Sbjct: 521 Y---------DPARLAPIKRIDSEFLYNYIIYARHYGLVLPDDL----YVQPSDLELLRR 567 Query: 1472 ALEVLNYLG 1498 E L+ G Sbjct: 568 CEEYLDGFG 576
>P19712:POLG_CSFVA Genome polyprotein [Contains: N-terminal protease - Classical swine| fever virus (strain Alfort) (CSFV) (Hog cholera virus) Length = 3898 Score = 60.1 bits (144), Expect = 5e-08 Identities = 80/340 (23%), Positives = 139/340 (40%), Gaps = 20/340 (5%) Frame = +2 Query: 347 TGSGKTTQIPQFVLEAEGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRF 526 TG+GKTT++P+ V+E G R +V P ++ + +++R Sbjct: 1817 TGAGKTTELPRSVIEEIGRHKRVLVLI--PLRAAAESVYQYMRQKHP-----SIAFNLRI 1869 Query: 527 EDCSSHK--TVLKYLTDGMLLREAMADPLLE----RYKVIVLDEAHERTLATDVLFGLLK 688 + T + Y + G + M+ P L Y I LDE H AT ++ Sbjct: 1870 GEMKEGDMATGITYASYGYFCQ--MSQPKLRAAMVEYSFIFLDEYH---CATPEQLAIMG 1924 Query: 689 EVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPER------DY 850 ++ + +L++V M+AT A + G+ HP+E F E + +Y Sbjct: 1925 KIHRFSENLRVVAMTAT-----------PAGTVTTTGQKHPIEEFIAPEVMKGEDLGSEY 1973 Query: 851 LEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTL 1030 L+ A ++I + E ++LVF+ +A +K+ + N G YS Sbjct: 1974 LDIA---GLKIPVEEMKNNMLVFVPTRNMAVEAAKKLKAKGYNSGYY---------YSGE 2021 Query: 1031 PPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRI 1210 P+ + + +P +VV+TN E+ +T+ + V+D G +K RI Sbjct: 2022 DPSNLRVVTSQSP-----------YVVVATNAIESGVTLPDLDVVVDTGLKCEK----RI 2066 Query: 1211 R--------VESLLVSPISKASAHQRAGRAGRTQPGKCFR 1306 R V L ++ QR GR GR +PG+ +R Sbjct: 2067 RLSPKMPFIVTGLKRMAVTIGEQAQRRGRVGRVKPGRYYR 2106
>Q01499:POLG_BVDVS Genome polyprotein [Contains: N-terminal protease - Bovine viral| diarrhea virus (strain SD-1) (BVDV) (Mucosal disease virus) Length = 3898 Score = 60.1 bits (144), Expect = 5e-08 Identities = 78/337 (23%), Positives = 134/337 (39%), Gaps = 17/337 (5%) Frame = +2 Query: 347 TGSGKTTQIPQFVLEAEGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRF 526 TG+GKTT++P+ V+E G R +V + +++R Sbjct: 1817 TGAGKTTELPKAVIEEIGRHKRVLVLIPLRAAAESVYQYMRLKHP-------SISFNLRI 1869 Query: 527 EDCSSHK--TVLKYLTDGMLLREAMADPLLE----RYKVIVLDEAHERTLATDVLFGLLK 688 D T + Y + G + M P L Y I LDE H AT ++ Sbjct: 1870 GDMKEGDMATGITYASYGYFCQ--MPQPKLRAAMVEYSYIFLDEYH---CATPEQLAIIG 1924 Query: 689 EVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEP-ERDYLEAAI 865 ++ + +++V M+AT A + G+ HP+E F E E + L + Sbjct: 1925 KIHRFSESIRVVAMTAT-----------PAGSVTTTGQKHPIEEFIAPEVMEGEDLGSQF 1973 Query: 866 RTV--VQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPA 1039 + ++I + E G++LVF+ + +K+ + N G YS PA Sbjct: 1974 LDIAGLKIPVDEMKGNMLVFVPTRNMAVEVAKKLKAKGYNSGYY---------YSGEDPA 2024 Query: 1040 MQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVE 1219 + + +P ++V+TN E+ +T+ + V+D G +K R+RV Sbjct: 2025 NLRVVTSQSP-----------YVIVATNAIESGVTLPDLDTVVDTGLKCEK----RVRVS 2069 Query: 1220 S--------LLVSPISKASAHQRAGRAGRTQPGKCFR 1306 S L ++ QR GR GR +PG+ +R Sbjct: 2070 SKIPFIVTGLKRMAVTVGEQAQRRGRVGRVKPGRYYR 2106
>P19711:POLG_BVDVN Genome polyprotein [Contains: N-terminal protease - Bovine viral| diarrhea virus (isolate NADL) (BVDV) (Mucosal disease virus) Length = 3988 Score = 60.1 bits (144), Expect = 5e-08 Identities = 79/340 (23%), Positives = 134/340 (39%), Gaps = 20/340 (5%) Frame = +2 Query: 347 TGSGKTTQIPQFVLEAEGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRF 526 TG+GKTT++P+ V+E G R +V + +++R Sbjct: 1907 TGAGKTTELPKAVIEEIGRHKRVLVLIPLRAAAESVYQYMRLKHP-------SISFNLRI 1959 Query: 527 EDCSSHK--TVLKYLTDGMLLREAMADPLLE----RYKVIVLDEAHERTLATDVLFGLLK 688 D T + Y + G + M P L Y I LDE H AT ++ Sbjct: 1960 GDMKEGDMATGITYASYGYFCQ--MPQPKLRAAMVEYSYIFLDEYH---CATPEQLAIIG 2014 Query: 689 EVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPER------DY 850 ++ + +++V M+AT A + G+ HP+E F E + + Sbjct: 2015 KIHRFSESIRVVAMTAT-----------PAGSVTTTGQKHPIEEFIAPEVMKGEDLGSQF 2063 Query: 851 LEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTL 1030 L+ A ++I + E G++LVF+ + +K+ + N G YS Sbjct: 2064 LDIA---GLKIPVDEMKGNMLVFVPTRNMAVEVAKKLKAKGYNSGYY---------YSGE 2111 Query: 1031 PPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRI 1210 PA + + +P ++V+TN E+ +T+ + VID G +K R+ Sbjct: 2112 DPANLRVVTSQSP-----------YVIVATNAIESGVTLPDLDTVIDTGLKCEK----RV 2156 Query: 1211 RVES--------LLVSPISKASAHQRAGRAGRTQPGKCFR 1306 RV S L ++ QR GR GR +PG+ +R Sbjct: 2157 RVSSKIPFIVTGLKRMAVTVGEQAQRRGRVGRVKPGRYYR 2196
>Q96662:POLG_BVDVC Genome polyprotein [Contains: N-terminal protease - Bovine viral| diarrhea virus (strain CP7) (BVDV) (Mucosal disease virus) Length = 3907 Score = 59.3 bits (142), Expect = 9e-08 Identities = 79/340 (23%), Positives = 134/340 (39%), Gaps = 20/340 (5%) Frame = +2 Query: 347 TGSGKTTQIPQFVLEAEGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRF 526 TG+GKTT++P+ V+E G R +V + +++R Sbjct: 1826 TGAGKTTELPKAVIEEIGRHKRVLVLIPLRAAAESVYQYMRLKHP-------SISFNLRI 1878 Query: 527 EDCSSHK--TVLKYLTDGMLLREAMADPLLE----RYKVIVLDEAHERTLATDVLFGLLK 688 D T + Y + G + M P L Y I LDE H AT ++ Sbjct: 1879 GDMKEGDMATGITYASYGYFCQ--MPQPKLRAAMIEYSYIFLDEYH---CATPEQLAVIG 1933 Query: 689 EVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPER------DY 850 ++ + +++V M+AT A + G+ HP+E F E + + Sbjct: 1934 KIHRFSESIRVVAMTAT-----------PAGSVTTTGQKHPIEEFIAPEVMKGEDLGSQF 1982 Query: 851 LEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTL 1030 L+ A ++I + E G++LVF+ + +K+ + N G YS Sbjct: 1983 LDIA---GLKIPVEEMKGNMLVFVPTRNMAVEVAKKLKAKGYNSGYY---------YSGE 2030 Query: 1031 PPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRI 1210 PA + + +P +VV+TN E+ +T+ + V+D G +K R+ Sbjct: 2031 DPANLRVVTSQSP-----------YVVVATNAIESGVTLPDLDTVVDTGLKCEK----RV 2075 Query: 1211 RVES--------LLVSPISKASAHQRAGRAGRTQPGKCFR 1306 RV S L ++ QR GR GR +PG+ +R Sbjct: 2076 RVSSKIPFIVTGLKRMAVTVGEQAQRRGRVGRVKPGRYYR 2115
>O72904:NTP2_FOWPV Nucleoside triphosphatase II - Fowlpox virus (FPV)| Length = 682 Score = 58.9 bits (141), Expect = 1e-07 Identities = 81/358 (22%), Positives = 147/358 (41%), Gaps = 25/358 (6%) Frame = +2 Query: 296 EFLRVLRDNQTLILVGETGSGKTTQIPQFVLEAE----GLSNRSMV---------ACTQP 436 + +LR + +++ G TG GKT+Q+P+ ++ G N V + P Sbjct: 179 QIFELLRKRKQIVVTGSTGIGKTSQLPKVIMWYNYLFGGWDNLDRVRFDYISRPIVLSLP 238 Query: 437 XXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLR-EAMADPLLE 613 + + + E +R+ + H T DG++L + L Sbjct: 239 RVALVKSNGINFLQSLGFSDFEGSPVELRYGGKTEHTTRQH---DGIVLSTNKLTSYSLS 295 Query: 614 RYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL-KLVVMSATLE--AEKFQGYFSGAPL 784 Y +I++DE HE D++ +L+ KN + LV+MSATLE ++ Q + Sbjct: 296 NYNIIIVDEIHEHDRIADIIISVLR---KNIDTIHSLVLMSATLEDDRDRLQEFLPDVEF 352 Query: 785 MKVPGR-LHPVEIFYTQE----PERDYLEAAIRTV-VQIHMCEPAGDI--LVFLTGEEEI 940 + G L+ ++ Y + + Y E + + ++ C P + ++FL + Sbjct: 353 YHIEGPVLYSIKEIYVKNKYSYDSKAYTEEEKKNISTTLNWCRPRNGMCGILFLASVSQC 412 Query: 941 EDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVST 1120 + + K ++M + ++ +P + + + P +E P I+VST Sbjct: 413 ISYKKYLEKSNSDM-------DFIIIHGKIPDITE--VLNAVQRPGRE-RPC---ILVST 459 Query: 1121 NIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPG 1294 E+S+TI +V D G +VY P+ L ISK+ QR GR GR G Sbjct: 460 PYLESSITIRTATHVYDTG----RVYVPKPFGGDQLF--ISKSMMTQRKGRVGRVSKG 511
>P21530:POLG_CSFVB Genome polyprotein [Contains: N-terminal protease - Classical swine| fever virus (strain Brescia) (CSFV) (Hog cholera virus) Length = 3898 Score = 55.8 bits (133), Expect = 1e-06 Identities = 79/340 (23%), Positives = 135/340 (39%), Gaps = 20/340 (5%) Frame = +2 Query: 347 TGSGKTTQIPQFVLEAEGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRF 526 TG+GKTT++P+ V+E G R +V P ++ + +++R Sbjct: 1817 TGAGKTTELPRSVIEEIGRHKRVLVLI--PLRAAAESVYQYMRQKHP-----SIAFNLRI 1869 Query: 527 EDCSSHK--TVLKYLTDGMLLREAMADPLLE----RYKVIVLDEAHERTLATDVLFGLLK 688 + T + Y + G + M P L Y I LDE H T + G + Sbjct: 1870 GEMKEGDMATGITYASYGYFCQ--MPQPKLRAAMVEYSFIFLDEYHCSTPEQLAIMGKIH 1927 Query: 689 EVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPER------DY 850 +N L++V M+AT A + G+ HP+E + E + +Y Sbjct: 1928 RFSEN---LRVVAMTAT-----------PAGTVTTTGQKHPIEEYIAPEVMKGEDLGPEY 1973 Query: 851 LEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTL 1030 L+ A ++I + E ++LVF+ + +K+ + N G YS Sbjct: 1974 LDIA---GLKIPVEEMKSNMLVFVPTRNMAVETAKKLKAKGYNSGYY---------YSGE 2021 Query: 1031 PPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRI 1210 P+ + + +P +VV+TN E+ +T+ + V+D G +K RI Sbjct: 2022 DPSNLRVVTSQSP-----------YVVVATNAIESGVTLPDLDVVVDTGLKCEK----RI 2066 Query: 1211 R--------VESLLVSPISKASAHQRAGRAGRTQPGKCFR 1306 R V L ++ QR GR GR +PG+ +R Sbjct: 2067 RLSPKMPFIVTGLKRMAVTIGEQAQRRGRVGRVKPGRYYR 2106
>Q9YW06:NTP2_MSEPV Nucleoside triphosphatase II - Melanoplus sanguinipes entomopoxvirus| (MsEPV) Length = 717 Score = 55.5 bits (132), Expect = 1e-06 Identities = 73/296 (24%), Positives = 128/296 (43%), Gaps = 6/296 (2%) Frame = +2 Query: 626 IVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAE--KFQGYFSGAPLMKVPG 799 +++DE HE D+ + + K +V++SAT+E++ + YF + +PG Sbjct: 328 VIIDEIHEHDKFGDIAIAIARTKKKKYNIRNIVLISATIESDIDNIRIYFKNIVEIYIPG 387 Query: 800 RLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNN 979 V +F +E E + + + ++++ +M +++F + +KIN E Sbjct: 388 ----VSLFPVKEIECE--DKDVISILKNYMPSVGKSVIIFY-------ETIKKIN-EYKE 433 Query: 980 MGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLK-EGGPAGRKIVVSTNIAETSLTIDGI 1156 + + + K+ +Y+ + KI + K + I++STN E+S+TI Sbjct: 434 ILESILIDKIYKIYT-----IHSKITNINAIINKLQNDKKHIHIILSTNYLESSITITNA 488 Query: 1157 VYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNGD 1336 VID G K+Y + S + I+++ QR GR GR G R Y++ D Sbjct: 489 TLVIDNG----KMYQKKFLTGSTMY--ITESMYIQRKGRVGRISKGTYIRTYSK-----D 537 Query: 1337 LQPQTYPEILRSNLANTVLTLKKLGID---DLVHFDFMDPPAPETLMRALEVLNYL 1495 L T+ I L +L K +D DL F+ P P R LNYL Sbjct: 538 LLQTTFKHINYQYLWEYILVFKYNNMDYYNDL----FIKPDDPS---RIENTLNYL 586
>Q9Q8Q2:NTP2_MYXVL Nucleoside triphosphatase II - Myxoma virus (strain Lausanne) (MYXV)| Length = 678 Score = 53.5 bits (127), Expect = 5e-06 Identities = 81/359 (22%), Positives = 146/359 (40%), Gaps = 31/359 (8%) Frame = +2 Query: 329 LILVGETGSGKTTQIPQFVLEAE-------GLSNRSMVACTQPXXXXXXXXXXXXX--EE 481 ++L G+TG GKT+Q+P+ +L LS + +P E Sbjct: 184 VVLTGDTGVGKTSQVPKLLLWFNYLFGGFTDLSTLTFEVQEKPIVLSLPRVALVKLHSET 243 Query: 482 MDVTIG-EEVG---YSIRFEDCSSHKTVLKYLTDGMLLR-EAMADPLLERYKVIVLDEAH 646 + ++G EE+ S++F + ++ G++ + L +Y ++LDE H Sbjct: 244 LLTSLGFEEIHGSPVSLKFGNMQERFVNTRFSRYGIVFSTHKITLNTLFKYSTVILDEVH 303 Query: 647 ERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK--FQGYFSGAPLMKVPGRL----- 805 E D++ + ++ ++ L L M+ATLE ++ + +F+ + + +PG Sbjct: 304 EHDQTGDIIIAVCRKYIRKLDSLFL--MTATLEDDRRRIEEFFAESVFVHIPGGTLFSIS 361 Query: 806 --------HPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKI 961 P+ F E E+ L AI+T +VF++ + E + + Sbjct: 362 EAYVKNSNDPLNRFMYIEEEKRNLANAIKTYTPPKQSSG----IVFVSTVSQCEAYKQYL 417 Query: 962 NKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSL 1141 ++ + P K ++ + Q I D G + I++ST E+S+ Sbjct: 418 SERL--------PYKFYIIHGKV-----QNINDVLSDIYDNDGVS---IIISTPYLESSV 461 Query: 1142 TIDGIVYVIDPGFSKQKVY--NPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLY 1312 T+ +V D G +VY +P ES ISK+ QR GR GR PG Y Sbjct: 462 TVRNATHVYDTG----RVYIPSPYGGCESF----ISKSMRDQRKGRVGRVNPGMYVYFY 512
>P17765:POLG_BYMV Genome polyprotein [Contains: P1 proteinase - Bean yellow mosaic| virus Length = 3056 Score = 52.0 bits (123), Expect = 1e-05 Identities = 80/344 (23%), Positives = 140/344 (40%), Gaps = 9/344 (2%) Frame = +2 Query: 317 DNQTLILVGETGSGKTTQIPQFVLEAEGLSNRS---MVACTQPXXXXXXXXXXXXXEEMD 487 D +++ G GSGK+T +P + LSN+ M+ T+P E + Sbjct: 1219 DAHDILVRGAVGSGKSTGLPFY------LSNKGKVLMIESTRPLA-----------ENVF 1261 Query: 488 VTIGEEVGYS---IRFEDCSSH-KTVLKYLTDGMLLREAMADP-LLERYKVIVLDEAHER 652 + E Y+ +R +S+ + + +T G L +P +++ YK +++DE H Sbjct: 1262 KQLKSEPFYASPTLRMRGTTSYGASPITIMTSGYALHYYANNPAMMKEYKFVIIDECHVH 1321 Query: 653 TLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQ 832 LLKE D KL+ +SAT + + + + P+ V E F +Q Sbjct: 1322 DANAIAFVSLLKEY---SFDGKLIKVSATPPGREVE-FTTQYPVTLVTEESLSFEQFVSQ 1377 Query: 833 EPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVV 1012 + T M + +ILV++ E++ +++K + + G V V Sbjct: 1378 Q----------GTGANCDMLDVCDNILVYVASYNEVD----QLSKMLLDRGHIVTKVD-- 1421 Query: 1013 PLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQK 1192 + + + +G + R +V+TNI E +T+D I V+D G Sbjct: 1422 ----------GRTMKNGKTEIESKGSRSKRHFIVATNIIENGVTLD-IEGVVDFGLKVVP 1470 Query: 1193 VYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRL-YTEK 1321 + R+ +S QR GR GR + GK R+ TEK Sbjct: 1471 ELDVDNRLMRYTKQNVSYGERIQRLGRVGRHKAGKALRIGVTEK 1514
>Q9Q927:NTP2_SFVKA Nucleoside triphosphatase II - Shope fibroma virus (strain Kasza)| (SFV) Length = 678 Score = 51.6 bits (122), Expect = 2e-05 Identities = 76/362 (20%), Positives = 144/362 (39%), Gaps = 34/362 (9%) Frame = +2 Query: 329 LILVGETGSGKTTQIPQFVLEAE----GLSNRSMVAC-TQPXXXXXXXXXXXXXEEMDVT 493 ++L G+TG GKT+Q+P+ +L G N S + Q + T Sbjct: 184 VVLTGDTGVGKTSQVPKLLLWFNYLFGGFVNLSTITFDVQEKPIVLSLPRVALVKLHSET 243 Query: 494 IGEEVGY--------SIRFEDCSSHKTVLKYLTDGMLLR-EAMADPLLERYKVIVLDEAH 646 + +G+ S++F + ++ G++ + L Y ++LDE H Sbjct: 244 LLTSLGFNEIHKSPVSLKFGNMQEQFVNTRFRRYGIVFSTHKITLNTLFNYSTVILDEVH 303 Query: 647 ERTLATDVLFGLLKEVLKNRPDLKLVVMSATLE--AEKFQGYFSGAPLMKVPG-RLHPVE 817 E D++ + ++ ++ L L M+ATLE ++ + +F+ + + +PG L + Sbjct: 304 EHDQTGDIIIAVCRKYIRKLDSLFL--MTATLEDDRQRIEEFFTESVFVHIPGGTLFSIS 361 Query: 818 IFYTQEPERD-----YLEAAIRTVV---QIHMCEPAGDILVFLTGEEEIEDACRKINKEV 973 Y + Y+E R +V + + +VF++ + + + +++ + Sbjct: 362 EAYVKNSNDSLNKFMYIEEEKRNLVNAIKTYTPPKQSSGIVFVSTVSQCDVYKQYLSERL 421 Query: 974 NNMGDQVGPVKVVPLYSTLPPA--MQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTI 1147 P K ++ + + I+D G I++ST E+S+T+ Sbjct: 422 --------PYKFYIIHGKIQNINDLLSDIYDNE----------GVSIIISTPYLESSVTV 463 Query: 1148 DGIVYVIDPGFSKQKVYNPRIRVESLLVSP-------ISKASAHQRAGRAGRTQPGKCFR 1306 +V D G +VY P SP ISK+ QR GR GR +PG Sbjct: 464 QNATHVYDTG----RVYIP---------SPYGGREVFISKSMRDQRKGRVGRVKPGMYIY 510 Query: 1307 LY 1312 Y Sbjct: 511 FY 512
>P17766:POLG_PPVNA Genome polyprotein [Contains: P1 proteinase - Plum pox potyvirus| (isolate NAT) (PPV) Length = 3125 Score = 51.2 bits (121), Expect = 2e-05 Identities = 93/392 (23%), Positives = 152/392 (38%), Gaps = 32/392 (8%) Frame = +2 Query: 242 YLEILEKRRTLPVWQQKDEFLRVLRDN-------------QTLILVGETGSGKTTQIPQF 382 ++ LE +P ++ + FL R+N Q +++ G GSGK+T +P F Sbjct: 1207 WMNQLETGNVIPHYRTEGHFLEFTRENAAHIANEVMHGSHQDILIRGAVGSGKSTGLP-F 1265 Query: 383 VLEAEGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSH-KTVLK 559 L +G + ++ T+P ++ T+ R S+ T + Sbjct: 1266 HLSKKG--HVLLIEPTRPLAENVCKQLRGQPFNVNPTL--------RMRGMSTFGSTPIT 1315 Query: 560 YLTDGMLLREAMADPL-LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 736 +T G L +P L+ YK I+ DE H + LL E + P K++ +SA Sbjct: 1316 VMTSGYALHFLANNPTYLDNYKCIIFDECHVHDASAMAFRCLLSEY--SYPG-KILKVSA 1372 Query: 737 TLEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIR---------TVVQIHM 889 T PG H VE F TQ+ + +E ++ T + Sbjct: 1373 T-----------------PPG--HEVE-FKTQKEVKVIVEESLSFQQFVSNLGTGCNSDI 1412 Query: 890 CEPAGDILVFLTGEEEIE-------DACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQ 1048 + ++LV++ E++ D K++K V+ +VG V++ Sbjct: 1413 LKHGVNVLVYVASYNEVDTLSKLLTDRSFKVSK-VDGRTMKVGNVEIPT----------- 1460 Query: 1049 KIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLL 1228 G A VV+TNI E +T+D I V+D G V + R+ Sbjct: 1461 -----------SGTQAKPHFVVATNIIENGVTLD-IDVVVDFGLKVVPVLDIDNRLVRYT 1508 Query: 1229 VSPISKASAHQRAGRAGRTQPGKCFRL-YTEK 1321 IS QR GR GR +PG R+ +TEK Sbjct: 1509 KKSISYGERIQRLGRVGRNKPGAALRIGFTEK 1540
>P17767:POLG_PPVRA Genome polyprotein [Contains: P1 proteinase - Plum pox potyvirus| (strain Rankovic) (PPV) Length = 3140 Score = 49.7 bits (117), Expect = 7e-05 Identities = 91/381 (23%), Positives = 149/381 (39%), Gaps = 25/381 (6%) Frame = +2 Query: 254 LEKRRTLPVWQQKDEFLRVLRDN-------------QTLILVGETGSGKTTQIPQFVLEA 394 LE +P ++ + FL R+N Q +++ G GSGK+T +P F L Sbjct: 1211 LETGNVIPHYRTEGHFLEFTRENAAHIANEVMHGSHQDILIRGAVGSGKSTGLP-FHLSK 1269 Query: 395 EGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSH-KTVLKYLTD 571 +G + ++ T+P ++ T+ R S+ T + +T Sbjct: 1270 KG--HVLLIEPTRPLAENVCKQLRGQPFNVNPTL--------RMRGMSTFGSTPITVMTS 1319 Query: 572 GMLLREAMADPL-LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 748 G L +P L+ YK I+ DE H + LL E + P K++ +SAT Sbjct: 1320 GYALHFLANNPTYLDNYKCIIFDECHVHDASAMAFRCLLSEY--SYPG-KILKVSAT--- 1373 Query: 749 EKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIR---------TVVQIHMCEPA 901 PG H V+ F TQ+ + +E ++ T + + Sbjct: 1374 --------------PPG--HEVD-FKTQKEVKVIVEESLSFQQFVSNLGTGCNSDILKHG 1416 Query: 902 GDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLK 1081 ++LV++ E++ ++K + + +V V KI + P Sbjct: 1417 VNVLVYVASYNEVDT----LSKLLTDRSFKVSKVD----------GRTMKIGNVEIPT-- 1460 Query: 1082 EGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQ 1261 G A VV+TNI E +T+D I V+D G V + R+ IS Q Sbjct: 1461 SGTQAKPHFVVATNIIENGVTLD-IDVVVDFGLKVVPVLDIDNRLVRYTKKSISYGERIQ 1519 Query: 1262 RAGRAGRTQPGKCFRL-YTEK 1321 R GR GR +PG R+ +TEK Sbjct: 1520 RLGRVGRNKPGAALRIGFTEK 1540
>P13529:POLG_PPVD Genome polyprotein [Contains: P1 proteinase - Plum pox potyvirus| (strain D) (PPV) Length = 3141 Score = 49.7 bits (117), Expect = 7e-05 Identities = 91/381 (23%), Positives = 149/381 (39%), Gaps = 25/381 (6%) Frame = +2 Query: 254 LEKRRTLPVWQQKDEFLRVLRDN-------------QTLILVGETGSGKTTQIPQFVLEA 394 LE +P ++ + FL R+N Q +++ G GSGK+T +P F L Sbjct: 1212 LETGNVIPHYRTEGHFLEFTRENAAHIANEVMHGSHQDILIRGAVGSGKSTGLP-FHLSK 1270 Query: 395 EGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSH-KTVLKYLTD 571 +G + ++ T+P ++ T+ R S+ T + +T Sbjct: 1271 KG--HVLLIEPTRPLAENVCKQLRGQPFNVNPTL--------RMRGMSTFGSTPITVMTS 1320 Query: 572 GMLLREAMADPL-LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 748 G L +P L+ YK I+ DE H + LL E + P K++ +SAT Sbjct: 1321 GYALHFLANNPTYLDNYKCIIFDECHVHDASAMAFRCLLSEY--SYPG-KILKVSAT--- 1374 Query: 749 EKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIR---------TVVQIHMCEPA 901 PG H V+ F TQ+ + +E ++ T + + Sbjct: 1375 --------------PPG--HEVD-FKTQKEVKVIVEESLSFQQFVSNLGTGCNSDILKHG 1417 Query: 902 GDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLK 1081 ++LV++ E++ ++K + + +V V KI + P Sbjct: 1418 VNVLVYVASYNEVDT----LSKLLTDRSFKVSKVD----------GRTMKIGNVEIPT-- 1461 Query: 1082 EGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQ 1261 G A VV+TNI E +T+D I V+D G V + R+ IS Q Sbjct: 1462 SGTQAKPHFVVATNIIENGVTLD-IDVVVDFGLKVVPVLDIDNRLVRYTKKSISYGERIQ 1520 Query: 1262 RAGRAGRTQPGKCFRL-YTEK 1321 R GR GR +PG R+ +TEK Sbjct: 1521 RLGRVGRNKPGAALRIGFTEK 1541
>Q84934:POLG_PPVSK Genome polyprotein [Contains: P1 proteinase - Plum pox potyvirus| (strain SK 68) (PPV) Length = 3140 Score = 48.9 bits (115), Expect = 1e-04 Identities = 87/379 (22%), Positives = 145/379 (38%), Gaps = 23/379 (6%) Frame = +2 Query: 254 LEKRRTLPVWQQKDEFLRVLRDN-------------QTLILVGETGSGKTTQIPQFVLEA 394 LE +P ++ + FL R+N Q +++ G GSGK+T +P F L Sbjct: 1211 LETGNVIPHYRTEGHFLEFTRENAAHIANEVMHGSHQDILIRGAVGSGKSTGLP-FHLSK 1269 Query: 395 EGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSH-KTVLKYLTD 571 +G + ++ T+P ++ T+ R S+ T + +T Sbjct: 1270 KG--HVLLIEPTRPLAENVCKQLRGQPFNVNPTL--------RMRGMSTFGSTPITVMTS 1319 Query: 572 GMLLREAMADPL-LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 748 G L +P L+ YK I+ DE H + LL E + P K++ +SAT Sbjct: 1320 GYALHFLANNPTYLDNYKCIIFDECHVHDASAMAFRCLLSEY--SYPG-KILKVSATPP- 1375 Query: 749 EKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTG 928 GY K V++ + + + T + + ++LV++ Sbjct: 1376 ----GYEVDFKTQK------EVKVIVEEALSFQQFVSNLGTGCNSDILKHGVNVLVYVAS 1425 Query: 929 EEEIE-------DACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEG 1087 E++ D K++K V+ +VG V++ G Sbjct: 1426 YNEVDTLSKLLTDRSFKVSK-VDGRTMKVGNVEIPT----------------------SG 1462 Query: 1088 GPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRA 1267 A VV+TNI E +T+D I V+D G + + R+ IS QR Sbjct: 1463 TQAKPHFVVATNIIENGVTLD-IDVVVDFGLKVVPILDIDNRLVRYTKKSISYGERIQRL 1521 Query: 1268 GRAGRTQPGKCFRL-YTEK 1321 GR GR +PG R+ +TEK Sbjct: 1522 GRVGRNKPGMALRIGFTEK 1540
>P90245:POL1_BAMMN Genome polyprotein 1 [Contains: Protein P3; 6 kDa protein 1 - Barley| mild mosaic virus (strain Na1) (BaMMV) Length = 2258 Score = 48.9 bits (115), Expect = 1e-04 Identities = 78/348 (22%), Positives = 133/348 (38%), Gaps = 6/348 (1%) Frame = +2 Query: 335 LVGETGSGKTTQIPQFVLEA-EGLSNR--SMVACTQPXXXXXXXXXXXXXEEMDVTIGEE 505 +VG TGSGK+T++P +GL+ R +++ C + G Sbjct: 450 VVGHTGSGKSTRLPTAYANCLKGLAGRKKNVLVCEPTRAATVNVTSGISQNFGRLVYGRH 509 Query: 506 VGYSIRFEDCSSHKTVLKYLTDGMLLREAMAD-PLLERYKVIVLDEAHERTLATDVLFGL 682 G+S + ++ +T G L D L ++ + LDE+H T V + Sbjct: 510 EGWS------NLGDKTIQVMTYGSALAAWKVDNKFLSQFDAVFLDESHLITTHALVFESI 563 Query: 683 LKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAA 862 +EV R K V + + +K + V V+ F + + + L Sbjct: 564 CQEVTNVR---KFYVSATPRDGKKCPEAVRRYEIKTVKSECSSVDTFVRSQDKENSLYVL 620 Query: 863 IRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYST--LPP 1036 V LVFL G+ E + A NK LYST Sbjct: 621 QHETV-----------LVFLAGKAECDRAASNWNK----------------LYSTNMYAY 653 Query: 1037 AMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRV 1216 ++ F A + R IV TNI ET +T++ + V+D GF+ + + + Sbjct: 654 SLTGDNFTVAYENIVTRMLTDRIIVFCTNILETGVTLN-VDCVVDFGFTMRPELDLVDKS 712 Query: 1217 ESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNGDLQPQTYPE 1360 +L+ +++ QR GRAGR + G + ++ + + P+T E Sbjct: 713 LTLMRRRVTENERAQRIGRAGRLRTGHAICIGNPETRHDLVPPETLYE 760
>P09814:POLG_TVMV Genome polyprotein [Contains: P1 proteinase - Tobacco vein mottling| virus (TVMV) Length = 3023 Score = 48.5 bits (114), Expect = 2e-04 Identities = 75/346 (21%), Positives = 136/346 (39%), Gaps = 15/346 (4%) Frame = +2 Query: 317 DNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTI 496 +++ +IL+G GSGK+T +P + + G+ ++ T+P T+ Sbjct: 1207 EHKDIILMGAVGSGKSTGLPTNLCKFGGVL---LLEPTRPLAENVTKQMRGSPFFASPTL 1263 Query: 497 GEEVGYSIRFEDCSSH-KTVLKYLTDGMLLRE-AMADPLLERYKVIVLDEAHERTLATDV 670 R + S+ + + +T G L A +RY+ I+ DE H Sbjct: 1264 --------RMRNLSTFGSSPITVMTTGFALHFFANNVKEFDRYQFIIFDEFHVLDSNAIA 1315 Query: 671 LFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLMKVPGR------LHPVEIFYTQ 832 L E N K++ +SAT PGR +PVE+ + Sbjct: 1316 FRNLCHEYSYNG---KIIKVSAT-----------------PPGRECDLTTQYPVELLIEE 1355 Query: 833 EPE-RDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINK------EVNNMGDQ 991 + RD+++A T + + +ILV++ E++ + +N+ +V+ + Sbjct: 1356 QLSLRDFVDAQ-GTDAHADVVKKGDNILVYVASYNEVDQLSKMLNERGFLVTKVDGRTMK 1414 Query: 992 VGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVID 1171 +G V+++ +G + +V+TNI E +T+D + V+D Sbjct: 1415 LGGVEIIT----------------------KGSSIKKHFIVATNIIENGVTLD-VDVVVD 1451 Query: 1172 PGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRL 1309 G + R+ S PIS QR GR GR +PG R+ Sbjct: 1452 FGLKVVPNLDSDNRLVSYCKIPISLGERIQRFGRVGRNKPGVALRI 1497
>Q5R746:YTDC2_PONPY YTH domain-containing protein 2 - Pongo pygmaeus (Orangutan)| Length = 671 Score = 48.1 bits (113), Expect = 2e-04 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 4/100 (4%) Frame = +2 Query: 1355 PEILRSNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDEGNL 1522 PE+LR L L K L + DF+ +PP + A+++L + A+D +L Sbjct: 7 PELLRMPLQELCLHTKLLAPVNCPVADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDL 66 Query: 1523 TSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 T LG +++ P++P + KM++ + C + IL+I+ L+ Sbjct: 67 TELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLA 106
>Q9H6S0:YTDC2_HUMAN YTH domain-containing protein 2 - Homo sapiens (Human)| Length = 671 Score = 47.8 bits (112), Expect = 3e-04 Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 4/100 (4%) Frame = +2 Query: 1355 PEILRSNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDEGNL 1522 PE+LR L L K L + DF+ +PP + A+++L + A+D +L Sbjct: 7 PELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDL 66 Query: 1523 TSLGEMMSEFPLDPQMSKMLVISPRYNCSNEILSISAMLS 1642 T LG +++ P++P + KM++ + C + IL+++ L+ Sbjct: 67 TELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTVACTLA 106
>Q90069:POLG_SBMVG Genome polyprotein [Contains: P1 proteinase - Soybean mosaic virus| (strain G2) (SMV) Length = 3066 Score = 47.4 bits (111), Expect = 4e-04 Identities = 83/390 (21%), Positives = 133/390 (34%), Gaps = 38/390 (9%) Frame = +2 Query: 254 LEKRRTLPVWQQKDEFLRVLRDNQTLI-------------LVGETGSGKTTQIPQFVLEA 394 LE+ R +P ++ EFL R+ I + G GSGK+T +P Sbjct: 1207 LEQNRVIPHYRSTGEFLEFTRETAAKIANLVATSSHTEFLIRGAVGSGKSTGLPHH---- 1262 Query: 395 EGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTV------- 553 LS + V +P + E V + FE + T+ Sbjct: 1263 --LSRKGKVLLLEPTRP----------------LAENVSKQLSFEPFYHNVTLRMRGLSK 1304 Query: 554 -----LKYLTDGMLLREAMADPL-LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL 715 + +T G +P L + I++DE H + T LKE + Sbjct: 1305 FGSSNIVVMTSGFAFHYYFNNPQQLSDFDFIIIDECHVQDSPTIAFNCALKEFEFSG--- 1361 Query: 716 KLVVMSATLEAEKFQGYFSGAPLMKVPGR------LHPVEIFYTQEPERDYLEAAIRTVV 877 KL+ +SAT PGR HPV++ A T Sbjct: 1362 KLIKVSAT-----------------TPGRECEFTTQHPVKLKVEDHLSFQNFVQAQGTGS 1404 Query: 878 QIHMCEPAGDILVFLTGEEEIEDACRKINKE------VNNMGDQVGPVKVVPLYSTLPPA 1039 M + ++LV++ E++ R + ++ V+ Q+G V++ + + P Sbjct: 1405 NADMIQHGNNLLVYVASYNEVDQLSRLLTEKHYKVTKVDGRTMQMGNVEIATTGTEVKP- 1463 Query: 1040 MQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVE 1219 +V+TNI E +T+D I VID G + R Sbjct: 1464 ---------------------HFIVATNIIENGVTLD-IDCVIDFGLKVVATLDTDNRCV 1501 Query: 1220 SLLVSPISKASAHQRAGRAGRTQPGKCFRL 1309 +S QR GR GR +PG R+ Sbjct: 1502 RYNKQSVSYGERIQRLGRVGRCKPGFALRI 1531
>Q9W1I2:BGCN_DROME Benign gonial cell neoplasm protein - Drosophila melanogaster (Fruit| fly) Length = 1215 Score = 47.0 bits (110), Expect = 5e-04 Identities = 45/187 (24%), Positives = 83/187 (44%), Gaps = 7/187 (3%) Frame = +2 Query: 1103 KIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGR 1282 K+V++T+I E+ Y ID VY+ ++K + +R Sbjct: 561 KVVLATDIIESLCLKVPFKYQIDTACRLNNVYDTTSCSGDDRFEWVAKDALLRRELIL-- 618 Query: 1283 TQPGK----CFRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDF---M 1441 QP K CFRL +++++ +L + P + L L +K L + ++ + Sbjct: 619 -QPNKGDVQCFRLISKEAYE-ELSETSQPSLQTMQLDKICLAVKLLSPNTIISEYLGITI 676 Query: 1442 DPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVISPRYNCSNEIL 1621 PP + A++ L + LDD ++T LG + + P+ Q+ +ML+ C + IL Sbjct: 677 SPPPLINVHHAVQFLKKIDVLDDAEDVTWLGCRLMDIPVSCQLGRMLIFGILLRCLDPIL 736 Query: 1622 SISAMLS 1642 +I + LS Sbjct: 737 TIVSSLS 743 Score = 37.0 bits (84), Expect = 0.48 Identities = 22/92 (23%), Positives = 43/92 (46%) Frame = +2 Query: 494 IGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPLLERYKVIVLDEAHERTLATDVL 673 +GE VG + + S T + Y T LR ++ +V+++ H TD+L Sbjct: 223 LGETVGIQLPYFSAVSSSTFIIYSTAQYFLR-SLTSQQFRNISHLVVNDVHLHDPYTDIL 281 Query: 674 FGLLKEVLKNRPDLKLVVMSATLEAEKFQGYF 769 ++ L + +L++V++S +KF +F Sbjct: 282 LSEIRMALSSHQNLRVVLLSQMGNPKKFTDFF 313
>P21231:POLG_SBMVN Genome polyprotein [Contains: P1 proteinase - Soybean mosaic virus| (strain N) (SMV) Length = 3066 Score = 46.6 bits (109), Expect = 6e-04 Identities = 85/390 (21%), Positives = 135/390 (34%), Gaps = 38/390 (9%) Frame = +2 Query: 254 LEKRRTLPVWQQKDEFLRVLRDNQTLI-------------LVGETGSGKTTQIPQFVLEA 394 LE+ R +P ++ EFL R+ I + G GSGK+T +P Sbjct: 1207 LEQNRVIPHYRSTGEFLEFTRETAAKIANLVATSSHTEFLIRGAVGSGKSTGLPHH---- 1262 Query: 395 EGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTV------- 553 LS + V +P + E V + FE + T+ Sbjct: 1263 --LSKKGKVLLLEPTRP----------------LAENVSKQLSFEPFYHNVTLRMRGMSK 1304 Query: 554 -----LKYLTDGMLLREAMADPL-LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL 715 + +T G + +P L + I++DE H + T LKE + Sbjct: 1305 FGSSNIVVMTSGFAFHYYVNNPQQLSDFDFIIIDECHVQDSPTIAFNCALKEFEFSG--- 1361 Query: 716 KLVVMSATLEAEKFQGYFSGAPLMKVPGR------LHPVEIFYTQEPERDYLEAAIRTVV 877 KL+ +SAT PGR HPV++ A T Sbjct: 1362 KLIKVSAT-----------------PPGRECEFTTQHPVKLKVEDHLSFQNFVQAQGTGS 1404 Query: 878 QIHMCEPAGDILVFLTGEEEIEDACRKINKE------VNNMGDQVGPVKVVPLYSTLPPA 1039 M + ++LV++ E++ R + ++ V+ Q+G V++ + Sbjct: 1405 NADMIQHGNNLLVYVASYNEVDQLSRLLTEKHYKVTKVDGRTMQMGNVEIATTGT----- 1459 Query: 1040 MQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVE 1219 EG P +V+TNI E +T+D I VID G + R Sbjct: 1460 --------------EGKP---HFIVATNIIENGVTLD-IDCVIDFGLKVVATLDTDNRCV 1501 Query: 1220 SLLVSPISKASAHQRAGRAGRTQPGKCFRL 1309 +S QR GR GR +PG R+ Sbjct: 1502 RYNKQSVSYGERIQRLGRVGRCKPGFALRI 1531
>P18479:POLG_ZYMVC Genome polyprotein [Contains: P1 proteinase - Zucchini yellow mosaic| virus (strain California) (ZYMV) Length = 3080 Score = 45.1 bits (105), Expect = 0.002 Identities = 87/405 (21%), Positives = 148/405 (36%), Gaps = 29/405 (7%) Frame = +2 Query: 254 LEKRRTLPVWQQKDEFLRVLRDNQTLI-------------LVGETGSGKTTQIPQFVLEA 394 L++ RT+P ++ +FL R+ + + G GSGK+T +P Sbjct: 1207 LQQNRTVPHYRTTGKFLEFTRNTAAFVANEIASSSEGEFLVRGRVGSGKSTSLPAH---- 1262 Query: 395 EGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDC--SSHKTVLKYLT 568 L+ + V +P + + V +R C SS+ TV+ T Sbjct: 1263 --LAKKGKVLLLEPTRPLAENVSRQLAGD---PFFQNVTLRMRGLSCFGSSNITVM---T 1314 Query: 569 DGMLLREAMADP-LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLE 745 G + +P L + +++DE H AT LKE KL+ +SAT Sbjct: 1315 SGFAFHYYVNNPHQLMEFDFVIIDECHVTDSATIAFNCALKEYNFAG---KLIKVSAT-- 1369 Query: 746 AEKFQGYFSGAPLMKVPGRLHPVEI-FYTQEPERDYLE-----AAIRTVVQIHMCEPAGD 907 PGR + F + D+L A +T M + + Sbjct: 1370 ---------------PPGRECDFDTQFAVKVKTEDHLSFHAFVGAQKTGSNADMVQHGNN 1414 Query: 908 ILVFLTGEEEIEDACRKINK------EVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAP 1069 ILV++ E++ + + + +V+ Q+G + ++ P Sbjct: 1415 ILVYVASYNEVDMLSKLLTERQFSVTKVDGRTMQLGKTTIETHGTSQKP----------- 1463 Query: 1070 PPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKA 1249 +V+TNI E +T+D + V+D G + R R +S Sbjct: 1464 -----------HFIVATNIIENGVTLD-VECVVDFGLKVGRRTGQRNRCVRYNKKSVSYG 1511 Query: 1250 SAHQRAGRAGRTQPGKCFRL-YTEKSFNGDLQPQTYPEILRSNLA 1381 QR GR GR++PG R+ +TEK +T PE + + A Sbjct: 1512 ERIQRLGRVGRSKPGTALRIGHTEKGI------ETIPEFIATEAA 1550
>P31999:POLG_LMV0 Genome polyprotein [Contains: P1 proteinase - Lettuce mosaic virus| (strain 0 / isolate French) (LMV) Length = 3255 Score = 44.3 bits (103), Expect = 0.003 Identities = 69/319 (21%), Positives = 122/319 (38%), Gaps = 27/319 (8%) Frame = +2 Query: 608 LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLM 787 L+ Y I+ DE H + LL+E K++ +SAT K Sbjct: 1490 LKAYDFIIFDECHVLDASAMAFRCLLQEFEYQG---KIIKVSATPPGRKLDFK------- 1539 Query: 788 KVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINK 967 +H V+I E T V + +ILV+++ E++ ++K Sbjct: 1540 ----PMHMVDIATENELSIQQFVQGQGTGVNCDATKKGDNILVYVSSYNEVD----MLSK 1591 Query: 968 EVNNMGDQVGPV--KVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSL 1141 +N+ G +V V + + L S + G P + VV+TNI E + Sbjct: 1592 MLNDKGYKVTKVDGRTMKLGSVEVETV--------------GTPQRKHFVVATNIIENGV 1637 Query: 1142 TIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEK 1321 T+D + V+D G + + R+ I+ QR GR GR + G R+ + + Sbjct: 1638 TLD-VDVVVDFGQKVVPILDSEHRMIRYTKKSITYGERIQRVGRVGRNKAGSAIRIGSTE 1696 Query: 1322 SFNGDLQPQTYPE-----------ILRSNLANTVL---------TLKKLGID-----DLV 1426 ++ E ++ SN++ +VL T++K + DLV Sbjct: 1697 MGTEEIPASIATEAAFLCFTYGLPVMTSNVSTSVLGNCTVRQARTMQKFELSPFFMVDLV 1756 Query: 1427 HFDFMDPPAPETLMRALEV 1483 H D PA +L++ ++ Sbjct: 1757 HHDGTIHPAINSLLKQFKL 1775
>O36979:POLG_ZYMVS Genome polyprotein [Contains: P1 proteinase - Zucchini yellow mosaic| virus (strain Singapore) (ZYMV) Length = 3083 Score = 43.9 bits (102), Expect = 0.004 Identities = 86/405 (21%), Positives = 146/405 (36%), Gaps = 29/405 (7%) Frame = +2 Query: 254 LEKRRTLPVWQQKDEFLRVLRDNQTLI-------------LVGETGSGKTTQIPQFVLEA 394 L++ RT+P ++ +FL R + + G GSGK+T +P Sbjct: 1210 LQQNRTVPHYRTTGKFLEFTRSTAAYVANEIASSSEGEFLVRGAVGSGKSTSLPAH---- 1265 Query: 395 EGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDC--SSHKTVLKYLT 568 L+ + V +P + + V +R C SS+ TV+ T Sbjct: 1266 --LAKKGKVLLLEPTRPLAENVSRQLAGD---PFFQNVTLRMRGLSCFGSSNITVM---T 1317 Query: 569 DGMLLREAMADP-LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLE 745 G + +P L + +++DE H AT LKE KL+ +SAT Sbjct: 1318 SGFAFHYYVNNPHQLMEFDFVIIDECHVTDSATIAFNCALKEYSFAG---KLIKVSAT-- 1372 Query: 746 AEKFQGYFSGAPLMKVPGRLHPVEI-FYTQEPERDYLE-----AAIRTVVQIHMCEPAGD 907 PGR + F + D+L A +T M + + Sbjct: 1373 ---------------PPGRECDFDTQFAVKVKTEDHLSFNAFVGAQKTGSNADMVQHGNN 1417 Query: 908 ILVFLTGEEEIEDACRKINK------EVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAP 1069 ILV++ E++ + + + +V+ Q+G + ++ P Sbjct: 1418 ILVYVASYNEVDMLSKLLTERQFSVTKVDGRTMQLGKTTIETHGTSQKP----------- 1466 Query: 1070 PPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKA 1249 +V+TNI E +T+D + V+D G + R P+S Sbjct: 1467 -----------HFIVATNIIENGVTLD-VECVVDFGLKVVAELDSEKRCVRYSKKPVSYG 1514 Query: 1250 SAHQRAGRAGRTQPGKCFRL-YTEKSFNGDLQPQTYPEILRSNLA 1381 QR GR GR++PG R+ +TEK + PE + + A Sbjct: 1515 ERIQRLGRVGRSKPGTALRIGHTEKGI------ENIPEFIATEAA 1553
>P89876:POLG_LMVE Genome polyprotein [Contains: P1 proteinase - Lettuce mosaic virus| (strain E) (LMV) Length = 3255 Score = 43.9 bits (102), Expect = 0.004 Identities = 69/319 (21%), Positives = 122/319 (38%), Gaps = 27/319 (8%) Frame = +2 Query: 608 LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLM 787 L+ + I+ DE H + LL+E K++ +SAT K Sbjct: 1490 LKMFDFIIFDECHVLDASAMAFRCLLQEFEYQG---KIIKVSATPPGRKLDFK------- 1539 Query: 788 KVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINK 967 +H V+I E T V + +ILV+++ E++ ++K Sbjct: 1540 ----PMHMVDITTENELSIQQFVQGQGTGVNCDATKKGDNILVYVSSYNEVD----MLSK 1591 Query: 968 EVNNMGDQVGPV--KVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSL 1141 +N+ G +V V + + L S + G P + VV+TNI E + Sbjct: 1592 MLNDKGYKVTKVDGRTMKLGSVEVETV--------------GTPQRKHFVVATNIIENGV 1637 Query: 1142 TIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEK 1321 T+D + V+D G + + R+ I+ QR GR GR + G R+ + + Sbjct: 1638 TLD-VDVVVDFGQKVVPILDSEHRMIRYTKKSITYGERIQRVGRVGRNKAGSAIRIGSTE 1696 Query: 1322 SFNGDLQPQTYPE-----------ILRSNLANTVL---------TLKKLGID-----DLV 1426 ++ E ++ SN++ +VL T++K + DLV Sbjct: 1697 MGTEEIPASIATEAAFLCFTYGLPVMTSNVSTSVLGNCTVRQARTMQKFELSPFFMVDLV 1756 Query: 1427 HFDFMDPPAPETLMRALEV 1483 H D PA +L+R ++ Sbjct: 1757 HHDGTVHPAINSLLRQFKL 1775
>Q89330:POLG_ZYMVR Genome polyprotein [Contains: P1 proteinase - Zucchini yellow mosaic| virus (strain Reunion Island) (ZYMV) Length = 3083 Score = 43.5 bits (101), Expect = 0.005 Identities = 86/405 (21%), Positives = 147/405 (36%), Gaps = 29/405 (7%) Frame = +2 Query: 254 LEKRRTLPVWQQKDEFLRVLRDNQTLI-------------LVGETGSGKTTQIPQFVLEA 394 L++ RT+P ++ +FL R+ + + G GSGK+T +P Sbjct: 1210 LQQNRTVPHYRTTGKFLEFTRNTAAFVANEIASSNEGEFLVRGAVGSGKSTSLPAH---- 1265 Query: 395 EGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDC--SSHKTVLKYLT 568 L+ + V +P + + V +R C SS+ TV+ T Sbjct: 1266 --LAKKGKVLLLEPTRPLAENVSRQLAGD---PFFQNVTLRMRGLSCFGSSNITVM---T 1317 Query: 569 DGMLLREAMADP-LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLE 745 G + +P + + I++DE H AT LKE KL+ +SAT Sbjct: 1318 SGYAFHYYVNNPHQMMEFDFIIIDECHVTDSATIAFNCALKEYNFAG---KLIKVSAT-- 1372 Query: 746 AEKFQGYFSGAPLMKVPGRLHPVEI-FYTQEPERDYLE-----AAIRTVVQIHMCEPAGD 907 PGR + F + D+L A RT M + + Sbjct: 1373 ---------------PPGRECDFDTQFAVKVKTEDHLSFQAFVGAQRTGSNADMIQHGNN 1417 Query: 908 ILVFLTGEEEIEDACRKINK------EVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAP 1069 ILV++ E++ + + + +V+ Q+G + ++ P Sbjct: 1418 ILVYVASYNEVDMLSKLLTERQFSVTKVDGRTMQLGKTTIETHGTSQKP----------- 1466 Query: 1070 PPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKA 1249 +V+TNI E +T+D + V+D G + R P++ Sbjct: 1467 -----------HFIVATNIIENGVTLD-VDCVVDFGLKVVAELDSESRCVRYSKKPVNYG 1514 Query: 1250 SAHQRAGRAGRTQPGKCFRL-YTEKSFNGDLQPQTYPEILRSNLA 1381 QR GR GR++PG R+ +TEK + PE + + A Sbjct: 1515 ERIQRLGRVGRSKPGTALRIGHTEKGI------ENIPEFIATEAA 1553
>P12927:NTP2_VACCV Nucleoside triphosphatase II - Vaccinia virus (strain Western Reserve| / WR) (VACV) Length = 676 Score = 42.4 bits (98), Expect = 0.011 Identities = 75/364 (20%), Positives = 141/364 (38%), Gaps = 33/364 (9%) Frame = +2 Query: 320 NQTLILVGETGSGKTTQIPQFVLEAE----GLSNRSMVACTQPXXXXXXXXXXXXXEEMD 487 ++ ++L G TG GKT+Q+P+ +L G S + Sbjct: 178 HRPVVLTGGTGVGKTSQVPKLLLWFNYLFGGFSTLDKITNFHERPVILSLPRIALVRLHS 237 Query: 488 VTIGEEVGY--------SIRFEDCSS---HKTVLKYLTDGMLLR-EAMADPLLERYKVIV 631 TI + +G+ S+R+ +K KY G++ ++ L Y ++ Sbjct: 238 NTILKSLGFKVLDGSPISLRYGSIPEELINKQPKKY---GIVFSTHKLSLTKLFSYGTLI 294 Query: 632 LDEAHERTLATDVLFGLLKEVLKNRPDL-KLVVMSATLE--AEKFQGYFSGAPLMKVPG- 799 +DE HE D++ + + K+ + + +M+ATLE E+ + + + +PG Sbjct: 295 IDEVHEHDQIGDIIIAVAR---KHHTKIDSMFLMTATLEDDRERLKVFLPNPAFIHIPGD 351 Query: 800 ------------RLHPVE-IFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEI 940 +++P + Y +E +R+ + T +Q++ +VF+ + Sbjct: 352 TLFKISEVFIHNKINPSSRMAYIEEEKRNLV-----TAIQMYTPPDGSSGIVFVASVAQC 406 Query: 941 EDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVST 1120 + + K + P + ++ K+ D K I++ST Sbjct: 407 HEYKSYLEKRL--------PYDMYIIHG--------KVLDIDEILEKVYSSPNVSIIIST 450 Query: 1121 NIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKC 1300 E+S+TI + ++ D G KV+ P S ISK+ QR GR GR PG Sbjct: 451 PYLESSVTIRNVTHIYDMG----KVFVPAPFGGSQEF--ISKSMRDQRKGRVGRVNPGTY 504 Query: 1301 FRLY 1312 Y Sbjct: 505 VYFY 508
>Q85197:POLG_PVMA Genome polyprotein [Contains: P1 proteinase - Potato virus A (PVA)| Length = 3059 Score = 42.0 bits (97), Expect = 0.015 Identities = 81/381 (21%), Positives = 137/381 (35%), Gaps = 22/381 (5%) Frame = +2 Query: 254 LEKRRTLPVWQQKDEFLRVLRDNQTLI-------------LVGETGSGKTTQIPQFVLEA 394 L R +P ++ + F+ R N I L G GSGK+T +P Sbjct: 1197 LNTNRIVPHYRTEGHFMEFTRANAPTIAHQIAHDLHTDIMLRGAVGSGKSTGLPYH---- 1252 Query: 395 EGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSH-KTVLKYLTD 571 LS + V +P + V ++R + T + +T Sbjct: 1253 --LSKKGTVLLLEPTRPLAENVTKQLKSDPF-----HVSPTLRMRGMAVFGSTPIHVMTT 1305 Query: 572 GMLLREAMAD-PLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 748 G L + +L Y I++DE H L LL E + KL+ +SAT Sbjct: 1306 GFALHYLANNLKMLSTYDFIIIDEFHVHDSNAIALRNLLHE---HNYQGKLIKVSATPPG 1362 Query: 749 EKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTG 928 + + FS +PVEI + A + + ++LV++ Sbjct: 1363 REVE--FSTQ---------YPVEIRVEDQVSFQDFVKAQGNGSNLDLTSKCDNLLVYVAS 1411 Query: 929 EEEIEDACRKINK------EVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGG 1090 E++ + + + +V+ ++G V+++ +G Sbjct: 1412 YNEVDQLSKLLLERHFLVTKVDGRSMKLGQVEIIT----------------------KGS 1449 Query: 1091 PAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAG 1270 + +V+TNI E +T+D I VID G + R+ S IS QR G Sbjct: 1450 ANKKHFIVATNIIENGVTLD-IDAVIDFGMKVVPFLDSDNRMISYNKVSISYGERIQRLG 1508 Query: 1271 RAGRTQPGKCFRL-YTEKSFN 1330 R GR + G R+ +TEK + Sbjct: 1509 RVGRNKAGVALRIGHTEKGIS 1529
>Q9JFC3:NTP2_VACCT Nucleoside triphosphatase II - Vaccinia virus (strain Tian Tan)| (VACV) Length = 676 Score = 42.0 bits (97), Expect = 0.015 Identities = 74/364 (20%), Positives = 141/364 (38%), Gaps = 33/364 (9%) Frame = +2 Query: 320 NQTLILVGETGSGKTTQIPQFVLEAE----GLSNRSMVACTQPXXXXXXXXXXXXXEEMD 487 ++ ++L G TG GKT+Q+P+ +L G S + Sbjct: 178 HRPVVLTGGTGVGKTSQVPKLLLWFNYLFGGFSTLDKITDFHERPVILSLPRIALVRLHS 237 Query: 488 VTIGEEVGY--------SIRFEDCSS---HKTVLKYLTDGMLLR-EAMADPLLERYKVIV 631 TI + +G+ S+R+ +K KY G++ ++ L Y ++ Sbjct: 238 NTILKSLGFKVLDGSPISLRYGSIPEELINKQPKKY---GIVFSTHKLSLTKLFSYGTLI 294 Query: 632 LDEAHERTLATDVLFGLLKEVLKNRPDL-KLVVMSATLE--AEKFQGYFSGAPLMKVPG- 799 +DE HE D++ + + K+ + + +M+ATLE E+ + + + +PG Sbjct: 295 IDEVHEHDQIGDIIIAVAR---KHHTKIDSMFLMTATLEDDRERLKVFLPNPAFIHIPGD 351 Query: 800 ------------RLHPVE-IFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEI 940 +++P + Y +E +R+ + T +Q++ +VF+ + Sbjct: 352 TLFKISEVFIHNKINPSSRMAYIEEEKRNLV-----TAIQMYTPPDGSSGIVFVASVAQC 406 Query: 941 EDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVST 1120 + + K + P + ++ K+ D K I++ST Sbjct: 407 HEYKSYLEKRL--------PYDMYIIHG--------KVLDIDEILEKVYSSPNVSIIIST 450 Query: 1121 NIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKC 1300 E+S+TI + ++ D G +V+ P S ISK+ QR GR GR PG Sbjct: 451 PYLESSVTIHNVTHIYDMG----RVFVPAPFGGSQQF--ISKSMRDQRKGRVGRVNPGTY 504 Query: 1301 FRLY 1312 Y Sbjct: 505 VYFY 508
>P89509:POLG_TUMVJ Genome polyprotein [Contains: P1 proteinase - Turnip mosaic virus| (strain Japanese) (TuMV) Length = 3164 Score = 41.2 bits (95), Expect = 0.025 Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Frame = +2 Query: 1085 GGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQR 1264 G P+ + +V+TNI E +T+D I V D G + R+ S + I+ QR Sbjct: 1522 GTPSKKHFIVATNIIENGVTLD-IDVVADFGTKVLPYLDTDSRMLSTTKTSINYGERIQR 1580 Query: 1265 AGRAGRTQPGKCFRL-YTEKSFN 1330 GR GR +PG R+ +TEK + Sbjct: 1581 LGRVGRHKPGHALRIGHTEKGLS 1603
>P20502:NTP2_VACCC Nucleoside triphosphatase II - Vaccinia virus (strain Copenhagen)| (VACV) Length = 676 Score = 41.2 bits (95), Expect = 0.025 Identities = 74/364 (20%), Positives = 141/364 (38%), Gaps = 33/364 (9%) Frame = +2 Query: 320 NQTLILVGETGSGKTTQIPQFVLEAE----GLSNRSMVACTQPXXXXXXXXXXXXXEEMD 487 ++ ++L G TG GKT+Q+P+ +L G S + Sbjct: 178 HRPVVLTGGTGVGKTSQVPKLLLWFNYLFGGFSTLDKITDFHERPVILSLPRIALVRLHS 237 Query: 488 VTIGEEVGY--------SIRFEDCSS---HKTVLKYLTDGMLLR-EAMADPLLERYKVIV 631 TI + +G+ S+R+ +K KY G++ ++ L Y ++ Sbjct: 238 NTILKSLGFKVLDGSPISLRYGSIPEELINKQPKKY---GIVFSTHKLSLTKLFSYGTLI 294 Query: 632 LDEAHERTLATDVLFGLLKEVLKNRPDL-KLVVMSATLE--AEKFQGYFSGAPLMKVPG- 799 +DE HE D++ + + K+ + + +M+ATLE E+ + + + +PG Sbjct: 295 IDEVHEHDQIGDIIIAVAR---KHHTKIDSMFLMTATLEDDRERLKVFLPNPAFIHIPGD 351 Query: 800 ------------RLHPVE-IFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEI 940 +++P + Y +E +R+ + T +Q++ +VF+ + Sbjct: 352 TLFKISEVFIHNKINPSSRMAYIEEEKRNLV-----TAIQMYTPPDGSSGIVFVASVAQC 406 Query: 941 EDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVST 1120 + + K + P + ++ K+ D K I++ST Sbjct: 407 HEYKSYLEKRL--------PYDMYIIHG--------KVLDIDEILEKVYSSPNVSIIIST 450 Query: 1121 NIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKC 1300 E+S+TI + ++ D G +V+ P S ISK+ QR GR GR PG Sbjct: 451 PYLESSVTIRNVTHIYDMG----RVFVPAPFGGSQEF--ISKSMRDQRKGRVGRVNPGTY 504 Query: 1301 FRLY 1312 Y Sbjct: 505 VYFY 508
>O57193:NTP2_VACCA Nucleoside triphosphatase II - Vaccinia virus (strain Ankara) (VACV)| Length = 676 Score = 41.2 bits (95), Expect = 0.025 Identities = 74/364 (20%), Positives = 141/364 (38%), Gaps = 33/364 (9%) Frame = +2 Query: 320 NQTLILVGETGSGKTTQIPQFVLEAE----GLSNRSMVACTQPXXXXXXXXXXXXXEEMD 487 ++ ++L G TG GKT+Q+P+ +L G S + Sbjct: 178 HRPVVLTGGTGVGKTSQVPKLLLWFNYLFGGFSTLDKITDFHERPVILSLPRIALVRLHS 237 Query: 488 VTIGEEVGY--------SIRFEDCSS---HKTVLKYLTDGMLLR-EAMADPLLERYKVIV 631 TI + +G+ S+R+ +K KY G++ ++ L Y ++ Sbjct: 238 NTILKSLGFKVLDGSPISLRYGSIPEELINKQPKKY---GIVFSTHKLSLTKLFSYGTLI 294 Query: 632 LDEAHERTLATDVLFGLLKEVLKNRPDL-KLVVMSATLE--AEKFQGYFSGAPLMKVPG- 799 +DE HE D++ + + K+ + + +M+ATLE E+ + + + +PG Sbjct: 295 IDEVHEHDQIGDIIIAVAR---KHHTKIDSMFLMTATLEDDRERLKVFLPNPAFIHIPGD 351 Query: 800 ------------RLHPVE-IFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEI 940 +++P + Y +E +R+ + T +Q++ +VF+ + Sbjct: 352 TLFKISEVFIHNKINPSSRMAYIEEEKRNLV-----TAIQMYTPPDGSSGIVFVASVAQC 406 Query: 941 EDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVST 1120 + + K + P + ++ K+ D K I++ST Sbjct: 407 HEYKSYLEKRL--------PYDMYIIHG--------KVLDIDEILEKVYSSPNVSIIIST 450 Query: 1121 NIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKC 1300 E+S+TI + ++ D G +V+ P S ISK+ QR GR GR PG Sbjct: 451 PYLESSVTIRNVTHIYDMG----RVFVPAPFGGSQEF--ISKSMRDQRKGRVGRVNPGTY 504 Query: 1301 FRLY 1312 Y Sbjct: 505 VYFY 508
>Q65399:POLG_BCMVN Genome polyprotein [Contains: P1 proteinase - Bean common mosaic| virus (strain NL-3 / Michigan) (BCMV) Length = 3066 Score = 40.8 bits (94), Expect = 0.033 Identities = 89/391 (22%), Positives = 144/391 (36%), Gaps = 34/391 (8%) Frame = +2 Query: 254 LEKRRTLPVWQQKDEFLRVLRDNQT-------------LILVGETGSGKTTQIPQFVLEA 394 L++ R +P ++ EFL R+ ++ G GSGK+T +P Sbjct: 1216 LQQNRVIPHYRTSGEFLEFTRETAAKVANTITLSTSTEFLIRGAVGSGKSTGLPHH---- 1271 Query: 395 EGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGY---SIRFEDC----SSHKTV 553 LS + V +P E + +G + + ++R SS+ TV Sbjct: 1272 --LSKKGKVLLLEPTRPLA--------ENVSKQLGRDPFFHAVTLRMRGLNRFGSSNITV 1321 Query: 554 LKYLTDGMLLREAMADP-LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 730 + T G + +P L + I++DE H AT LKE P KL+ + Sbjct: 1322 M---TSGFAFHYYVNNPHQLSDFDFIIIDECHVLDSATIAFNCALKEF--EFPG-KLLKV 1375 Query: 731 SATLEAEKFQGYFSGAPLMKVPGR------LHPVEIFYTQEPERDYLEAAIRTVVQIHMC 892 SAT PGR HPV++ + A T M Sbjct: 1376 SAT-----------------PPGRECEFTTQHPVKLKVEEHLSFQQFAQAQGTGSNADMV 1418 Query: 893 EPAGDILVFLTGEEEIEDACRKINK------EVNNMGDQVGPVKVVPLYSTLPPAMQQKI 1054 + ++LV++ E++ R + +V+ Q+G +++ + T Sbjct: 1419 QYGHNLLVYVASYNEVDQMSRHLLDRQFHVTKVDGRTMQMGNIEI-ETHGT--------- 1468 Query: 1055 FDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVS 1234 EG P +V+TNI E +T+D + VID G + R Sbjct: 1469 ---------EGKP---HFIVATNIIENGVTLD-VDCVIDFGLKVVAQLDSDNRCVRYEKK 1515 Query: 1235 PISKASAHQRAGRAGRTQPGKCFRL-YTEKS 1324 +S QR GR GR + G R+ +TEKS Sbjct: 1516 AVSFGERIQRLGRVGRHKAGFALRIGHTEKS 1546
>Q02597:POLG_TUMVQ Genome polyprotein [Contains: P1 proteinase - Turnip mosaic virus| (strain Quebec) (TuMV) Length = 3163 Score = 39.7 bits (91), Expect = 0.074 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Frame = +2 Query: 1085 GGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQR 1264 G P+ + +V+TNI E +T+D I V D G + R+ S + I+ QR Sbjct: 1522 GTPSRKHFIVATNIIENGVTLD-IDVVADFGTKVLPYLDTDNRMLSTTKTSINYGERIQR 1580 Query: 1265 AGRAGRTQPGKCFRL-YTEKSFN 1330 GR GR +PG R+ +TE+ + Sbjct: 1581 LGRVGRHKPGHALRIGHTERGLS 1603
>P33051:NTP2_VARV Nucleoside triphosphatase II - Variola virus| Length = 676 Score = 38.9 bits (89), Expect = 0.13 Identities = 93/462 (20%), Positives = 181/462 (39%), Gaps = 37/462 (8%) Frame = +2 Query: 320 NQTLILVGETGSGKTTQIPQFVLEAE----GLSNRSMVACTQPXXXXXXXXXXXXXEEMD 487 ++ ++L G TG GKT+Q+P+ +L G S + Sbjct: 178 HRPVVLTGGTGVGKTSQVPKLLLWFNYLFGGFSTLDKITDFHERPVILSLPRIALVRLHS 237 Query: 488 VTIGEEVGY--------SIRFEDCSS---HKTVLKYLTDGMLLR-EAMADPLLERYKVIV 631 TI + +G+ S+R+ +K KY G++ ++ L Y ++ Sbjct: 238 NTILKSLGFKVLDGSPISLRYGSIPEELINKQPKKY---GIVFSTHKLSLTKLFSYGTLI 294 Query: 632 LDEAHERTLATDVLFGLLKEVLKNRPDL-KLVVMSATLE--AEKFQGYFSGAPLMKVPG- 799 +DE HE D++ + + K+ + + +M+ATLE E+ + + + +PG Sbjct: 295 IDEVHEHDQIGDIIIAVAR---KHHTKIDSMFLMTATLEDDRERLKVFLPNPAFIHIPGD 351 Query: 800 ------------RLHPVE-IFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEI 940 +++P + Y +E +R+ + T +Q++ +VF+ + Sbjct: 352 TLFKISEVFIHNKINPSSRMAYIEEEKRNLV-----TAIQMYTPPDGSSGIVFVASVAQC 406 Query: 941 EDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVST 1120 + + K + P + ++ + KI + K I++S Sbjct: 407 HEYKSYLEKRL--------PYDMYIIHGKVLEI--DKILE------KVYSSPNVSIIISA 450 Query: 1121 NIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKC 1300 E+S+TI + ++ D G +V+ P S ISK+ QR GR GR PG Sbjct: 451 PYLESSVTIHNVTHIYDMG----RVFVPAPFGGSQQF--ISKSMRDQRKGRVGRVNPGTY 504 Query: 1301 FRLYTEKSFNGDLQPQTYPEILRSNLANTVLTLKKLGI---DDLVHFDFMDPPAPETLMR 1471 Y + S+ +Q I L N +L K + +DL F+ P + L R Sbjct: 505 VYFY-DLSYMKSIQ-----RINSEFLHNYILYANKFNLTLPEDL----FIIPTNLDILWR 554 Query: 1472 ALEVLNYLGALDDEGNLTSLGEMMSEFPLDP-QMSKMLVISP 1594 E ++ + N +++S + + + +K+ V+SP Sbjct: 555 TKEYIDSFDISTETWN-----KLLSNYYMKMIEYAKLYVLSP 591
>Q6XW15:POLG_BTMV Genome polyprotein [Contains: P1 proteinase - Beet mosaic virus| (BtMV) Length = 3085 Score = 37.4 bits (85), Expect = 0.37 Identities = 71/332 (21%), Positives = 122/332 (36%), Gaps = 3/332 (0%) Frame = +2 Query: 323 QTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGE 502 Q ++ G GSGK+T +P LS + V +P +E Sbjct: 1248 QEFVVRGAVGSGKSTGLPSH------LSRKGRVLLLEPTRPLAENVCKQLRKEPF----- 1296 Query: 503 EVGYSIRFEDCSSH-KTVLKYLTDGMLLREAMADPL-LERYKVIVLDEAHERTLATDVLF 676 + ++R ++ + + +T G L +P LE + I++DE+H +T + Sbjct: 1297 HLSPTLRMRGLTTFGSSNISVMTSGYALHFHANNPQRLEEFDFIMIDESHTMDSSTMAFY 1356 Query: 677 GLLKEVLKNRPDLKLVVMSATLEAE-KFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYL 853 LL+E LK+ E E K Q H V I + + Sbjct: 1357 CLLREYEFKGKILKVSATPPGRECEFKTQ---------------HDVLIKIEESLSYNSF 1401 Query: 854 EAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLP 1033 A T + + +ILV++ +++ +++K + G V V Sbjct: 1402 VTAQGTGSNADVVQNGDNILVYVPSYNDVD----QLSKGLMEKGHLVTKVD--------- 1448 Query: 1034 PAMQQKIFDPAPPPLKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIR 1213 K+ + P +G + + +V+TNI E +T+D I V+D G + R Sbjct: 1449 -GRTMKMGNVEIPT--KGTSSKKHFIVATNIIENGVTLD-IDVVVDFGLKVVAELDSDSR 1504 Query: 1214 VESLLVSPISKASAHQRAGRAGRTQPGKCFRL 1309 IS QR GR GR + G R+ Sbjct: 1505 CMRYKKVSISYGERLQRLGRVGRVKQGTALRI 1536
>A5DDF4:PRP5_PICGU Pre-mRNA-processing ATP-dependent RNA helicase PRP5 - Pichia| guilliermondii (Yeast) (Candida guilliermondii) Length = 862 Score = 35.8 bits (81), Expect = 1.1 Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 17/205 (8%) Frame = +2 Query: 608 LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATL--EAEKFQGYFSGAP 781 L R +VLDEA +R + K + + RPD ++V+ SAT + E F P Sbjct: 415 LRRTTFLVLDEA-DRMFDMGFEPQVNKVLSQIRPDKQMVLFSATFPKKLESLARSFLVDP 473 Query: 782 LMKVPGRLHPVEIFYTQ---------EPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEE 934 + V G + V TQ + + L+A ++ V + + +P G IL+F+ +E Sbjct: 474 IEIVAGGISVVAPEITQRVVLIDDSGDISQKKLQALLKIVDEFSVEDPEGKILIFVDKQE 533 Query: 935 EIED-ACRKINKE-----VNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPA 1096 +D R +N + ++ DQV + +S Sbjct: 534 AADDLMVRLLNNQILCIVIHGGKDQVDRKHAIKQFS---------------------DKN 572 Query: 1097 GRKIVVSTNIAETSLTIDGIVYVID 1171 G +++++T+IA L + G+ VI+ Sbjct: 573 GLRVLIATSIAARGLDVRGLNLVIN 597
>P29152:POLG_PSBMV Genome polyprotein [Contains: P1 proteinase - Pea seed-borne mosaic| virus (strain DPD1) Length = 3206 Score = 35.8 bits (81), Expect = 1.1 Identities = 77/373 (20%), Positives = 134/373 (35%), Gaps = 17/373 (4%) Frame = +2 Query: 254 LEKRRTLPVWQQKDEFLRVLRDNQTLI--------------LVGETGSGKTTQIPQFVLE 391 +E+ RT+P ++ +F+ R N + + G GSGK+T +P + L Sbjct: 1308 MEQNRTVPHYRTGGKFIEFTRSNAASVANEIAHTPDFSEYLIRGAVGSGKSTGLPCY-LS 1366 Query: 392 AEGLSNRSMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTD 571 A+G ++ T+P ++ G++ T + +T Sbjct: 1367 AKG--RVLLLEPTRPLTENVCAQLRGSPFHKSPSMSMRNGHTFG-------STPIHVMTT 1417 Query: 572 GMLLREAMAD-PLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 748 G L + + Y ++ DE H + + LKE LK+ E Sbjct: 1418 GYALHFFCNNVERIREYDFVIFDECHVIDSSAMSFYCALKEYSYQGKILKVSATPPGREV 1477 Query: 749 EKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTG 928 E F+ F PV I D A + + + +ILV+++ Sbjct: 1478 E-FKTQF-------------PVTIATEDSLSFDQFVQAQGSGANCDILKKGHNILVYVSS 1523 Query: 929 EEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRK- 1105 E++ +++K + + G +V V + + G A + Sbjct: 1524 YNEVD----RLSKLLVDRGFKVTKV-------------DGRTMKLGGVEINTSGTAEKPH 1566 Query: 1106 IVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRT 1285 +V+TNI E +T+D I V+D G + R IS QR GR GR Sbjct: 1567 FIVATNIIENGVTLD-IDVVVDFGVKVVAELDADARTMRYNKQAISYGERIQRLGRVGRL 1625 Query: 1286 QPGKCFRL-YTEK 1321 + G R+ +TEK Sbjct: 1626 KDGHALRIGHTEK 1638
>Q01500:POLG_PEMVC Genome polyprotein [Contains: P1 proteinase - Pepper mottle virus| (isolate California) (PeMV) (PepMoV C) Length = 3068 Score = 35.8 bits (81), Expect = 1.1 Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = +2 Query: 1109 VVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQ 1288 VV+TNI E +T+D I VID G + R + IS QR GR GR Q Sbjct: 1458 VVATNIIENGVTLD-IDVVIDFGMKVSPFLDVDNRSVAYNKVSISYGERIQRLGRVGRIQ 1516 Query: 1289 PGKCFRL-YTEK 1321 G R+ +TEK Sbjct: 1517 KGTALRIGHTEK 1528
>P04517:POLG_TEV Genome polyprotein [Contains: P1 proteinase - Tobacco etch virus| (TEV) Length = 3054 Score = 34.7 bits (78), Expect = 2.4 Identities = 24/78 (30%), Positives = 36/78 (46%) Frame = +2 Query: 1076 LKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASA 1255 + EG + +V+TNI E +TID I V+D G V + R + +S Sbjct: 1453 ITEGTSVKKHFIVATNIIENGVTID-IDVVVDFGTKVVPVLDVDNRAVQYNKTVVSYGER 1511 Query: 1256 HQRAGRAGRTQPGKCFRL 1309 Q+ GR GR + G R+ Sbjct: 1512 IQKLGRVGRHKEGVALRI 1529
>Q2RQY4:RPOA_RHORT DNA-directed RNA polymerase alpha chain - Rhodospirillum rubrum| (strain ATCC 11170 / NCIB 8255) Length = 340 Score = 34.3 bits (77), Expect = 3.1 Identities = 29/129 (22%), Positives = 56/129 (43%) Frame = -3 Query: 2565 QDTLGLT*REIGQIIVLWSYIDQPLSTDIGDCTDEIPGGQNIFIVDDPLRLMVHTIRGMK 2386 +D + L R + + L+ ++P + DE+P +N+ D L L V + +K Sbjct: 215 EDAVALAARILQDQLQLFINFEEPQAVSEEKKDDELPFNKNLLRKVDELELSVRSANCLK 274 Query: 2385 MDNLIILNGQVMPSSLQMSNLHKVPRKHCFPDIDIVLTTVEVCTAHLEVESGHDADKLLS 2206 DN+I + V + +M RK +I VL + + HL +E + + + Sbjct: 275 NDNIIYIGDLVQKTEAEMLRTPNFGRK-SLNEIKEVLAQMGL---HLGMEISNWPPENIE 330 Query: 2205 NIISRLHRP 2179 ++ +L P Sbjct: 331 DLAKKLEEP 339
>Q8ZRV8:RAPA_SALTY RNA polymerase-associated protein rapA - Salmonella typhimurium| Length = 968 Score = 34.3 bits (77), Expect = 3.1 Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 3/137 (2%) Frame = +2 Query: 617 YKVIVLDEAHERTLATDVL---FGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLM 787 + ++V+DEAH +TD + ++++ + P + L ++AT E + +F+ L+ Sbjct: 274 WDLLVVDEAHHLVWSTDAPSREYMAIEQLAERVPGVLL--LTATPEQLGMESHFARLRLL 331 Query: 788 KVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINK 967 P R H E F E +++Y P D + L ++ N Sbjct: 332 D-PNRFHDFEQFV--EEQKNY--------------RPVADAVAMLLAGNKLS------ND 368 Query: 968 EVNNMGDQVGPVKVVPL 1018 E+N +GD +G + PL Sbjct: 369 ELNRLGDLIGEQDIEPL 385
>Q8Z9J4:RAPA_SALTI RNA polymerase-associated protein rapA - Salmonella typhi| Length = 968 Score = 34.3 bits (77), Expect = 3.1 Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 3/137 (2%) Frame = +2 Query: 617 YKVIVLDEAHERTLATDVL---FGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLM 787 + ++V+DEAH +TD + ++++ + P + L ++AT E + +F+ L+ Sbjct: 274 WDLLVVDEAHHLVWSTDAPSREYMAIEQLAERVPGVLL--LTATPEQLGMESHFARLRLL 331 Query: 788 KVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINK 967 P R H E F E +++Y P D + L ++ N Sbjct: 332 D-PNRFHDFEQFV--EEQKNY--------------RPVADAVAMLLAGNKLS------ND 368 Query: 968 EVNNMGDQVGPVKVVPL 1018 E+N +GD +G + PL Sbjct: 369 ELNRLGDLIGEQDIEPL 385
>Q2KYS6:MSBA_BORA1 Lipid A export ATP-binding/permease protein msbA - Bordetella avium| (strain 197N) Length = 591 Score = 33.9 bits (76), Expect = 4.1 Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 3/29 (10%) Frame = +2 Query: 323 QTLILVGETGSGKTT---QIPQFVLEAEG 400 QT+ LVG +GSGKTT +P+FVL EG Sbjct: 378 QTVALVGRSGSGKTTLVNMLPRFVLPTEG 406
>Q5F485:DDX42_CHICK ATP-dependent RNA helicase DDX42 - Gallus gallus (Chicken)| Length = 944 Score = 33.9 bits (76), Expect = 4.1 Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 13/257 (5%) Frame = +2 Query: 608 LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATL--EAEKFQGYFSGAP 781 L+R +V DEA +R + + RPD + ++ SAT + EK P Sbjct: 398 LQRVTYLVFDEA-DRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDP 456 Query: 782 LMKVPGRLHP--------VEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEE 937 + V G + VEIF + + ++L R +V+ +G +L+F+T + Sbjct: 457 IRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLT---RRLVEF---TSSGSVLLFVTKKAN 510 Query: 938 IEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKIVVS 1117 E+ + +E +N+G L+ + + + K+ + E G I+V+ Sbjct: 511 AEELANNLKQEDHNLG---------LLHGDMDQSERNKV-------ISEFKKKGIPILVA 554 Query: 1118 TNIAETSLTIDGIVYVIDPGFSKQ-KVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPG 1294 T++A L I I VI+ ++ + RI R GRAG + G Sbjct: 555 TDVAARGLDIPSIKTVINYDVARDIDTHTHRI----------------GRTGRAG--EKG 596 Query: 1295 KCFRLYTEK--SFNGDL 1339 + L T K +F GDL Sbjct: 597 VAYTLLTPKDSNFAGDL 613
>Q01056:TEGU_SHV21 Probable large tegument protein - Saimiriine herpesvirus 2 (strain| 11) (SaHV-2) (Herpesvirus saimiri) Length = 2469 Score = 33.5 bits (75), Expect = 5.3 Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 1/112 (0%) Frame = +1 Query: 2080 HIDGDHLTLLNVYHAYKQNNEDPTWCYENFVNARAMKSADNVRQQLVRIMTRFNLKMCST 2259 HI+ +LT + YH YK P ++ A Q+ I + ++K T Sbjct: 2117 HINNINLTNNSTYHQYKDVLPQPLADKLSYEPKDLQNLASTTEPQIEDIFSELSIK--ET 2174 Query: 2260 DFNSREYYVNIRKAMLSGYFMQVAHLE-RTGHYLTVKDNQVVHLHPSNCMDH 2412 D ++ + +K + F+ H + +T + + ++N V + P+ C+ H Sbjct: 2175 DNTAKAPLLYPQKQPKTKKFLSPVHTKHKTSNSIIFEENTTVKVQPNTCIQH 2226
>Q2W2L3:RPOA_MAGMM DNA-directed RNA polymerase alpha chain - Magnetospirillum magneticum| (strain AMB-1 / ATCC 700264) Length = 338 Score = 33.5 bits (75), Expect = 5.3 Identities = 29/128 (22%), Positives = 55/128 (42%) Frame = -3 Query: 2562 DTLGLT*REIGQIIVLWSYIDQPLSTDIGDCTDEIPGGQNIFIVDDPLRLMVHTIRGMKM 2383 D + L R + + L+ ++P + + DE+P +N+ D L L V + +K Sbjct: 214 DAVALAARILQDQLQLFINFEEPTAVVEEEKKDELPFNKNLLRKVDELELSVRSANCLKN 273 Query: 2382 DNLIILNGQVMPSSLQMSNLHKVPRKHCFPDIDIVLTTVEVCTAHLEVESGHDADKLLSN 2203 DN+I + V + +M RK +I VL + + HL +E + + + Sbjct: 274 DNIIYIGDLVQKTEAEMLRTPNFGRK-SLNEIKEVLAQMGL---HLGMEIANWPPENIEE 329 Query: 2202 IISRLHRP 2179 + +L P Sbjct: 330 LAKKLEEP 337
>Q01901:POLG_PRSVH Genome polyprotein [Contains: P1 proteinase - Papaya ringspot virus| (strain P / mutant HA) Length = 3344 Score = 33.5 bits (75), Expect = 5.3 Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 1/95 (1%) Frame = +2 Query: 1100 RKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAG 1279 + +V+TNI E +T+D I VID G + R+ IS QR GR G Sbjct: 1700 KHFIVATNIIENGVTLD-IEAVIDFGMKVVPEMDSDNRMIRYSKQAISFGERIQRLGRVG 1758 Query: 1280 RTQPGKCFRL-YTEKSFNGDLQPQTYPEILRSNLA 1381 R + G R+ +TEK Q PE+ + A Sbjct: 1759 RHKEGIALRIGHTEKGI------QEIPEMAATEAA 1787
>P63975:DPO3X_MYCTU DNA polymerase III subunit gamma/tau - Mycobacterium tuberculosis| Length = 578 Score = 33.5 bits (75), Expect = 5.3 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = +2 Query: 530 DCSSHKTVLKYLTDGMLLRE-AMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNR 706 D +SH V D LR+ A P+ RY+V ++DEAH + T F L ++++ Sbjct: 93 DAASHGGV----DDTRELRDRAFYAPVQSRYRVFIVDEAH---MVTTAGFNALLKIVEEP 145 Query: 707 PDLKLVVMSATLEAEK 754 P+ L+ + AT E EK Sbjct: 146 PE-HLIFIFATTEPEK 160
>P63976:DPO3X_MYCBO DNA polymerase III subunit gamma/tau - Mycobacterium bovis| Length = 578 Score = 33.5 bits (75), Expect = 5.3 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = +2 Query: 530 DCSSHKTVLKYLTDGMLLRE-AMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNR 706 D +SH V D LR+ A P+ RY+V ++DEAH + T F L ++++ Sbjct: 93 DAASHGGV----DDTRELRDRAFYAPVQSRYRVFIVDEAH---MVTTAGFNALLKIVEEP 145 Query: 707 PDLKLVVMSATLEAEK 754 P+ L+ + AT E EK Sbjct: 146 PE-HLIFIFATTEPEK 160
>P18247:POLG_PVYN Genome polyprotein [Contains: P1 proteinase - Potato virus Y (strain| N) (PVY) Length = 3063 Score = 33.1 bits (74), Expect = 6.9 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%) Frame = +2 Query: 1082 EGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQ 1261 +G A VV+TNI E +T+D I V+D G + R + +S Q Sbjct: 1450 KGTSARPHFVVATNIIENGVTLD-IDVVVDFGLKVSPFLDIDNRSIAYNKVSVSYGERIQ 1508 Query: 1262 RAGRAGRTQPGKCFRL-YTEK 1321 R GR GR + G R+ +TEK Sbjct: 1509 RLGRVGRFKKGVALRIGHTEK 1529
>Q05549:HRQ1_YEAST Putative ATP-dependent helicase HRQ1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 1077 Score = 33.1 bits (74), Expect = 6.9 Identities = 21/60 (35%), Positives = 29/60 (48%) Frame = +2 Query: 1103 KIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGR 1282 K V+STN E + I G+ V+ GF P+S A+ HQ++GRAGR Sbjct: 590 KAVISTNALELGIDIGGLDAVLMCGF------------------PLSMANFHQQSGRAGR 631
>Q02963:POLG_PVYHU Genome polyprotein [Contains: P1 proteinase - Potato virus Y (strain| Hungarian) (PVY) Length = 3061 Score = 32.7 bits (73), Expect = 9.1 Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 1/80 (1%) Frame = +2 Query: 1085 GGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQR 1264 G A VV+TNI E +T+D I V+D G + R + +S QR Sbjct: 1451 GTSARPHFVVATNIIENGVTLD-IDVVVDFGLKVSPFLDIDNRSIAYNKVSVSYGERIQR 1509 Query: 1265 AGRAGRTQPGKCFRL-YTEK 1321 GR GR + G R+ +TEK Sbjct: 1510 LGRVGRFKKGVALRIGHTEK 1529
>Q00449:MDR49_DROME Multidrug resistance protein homolog 49 - Drosophila melanogaster| (Fruit fly) Length = 1302 Score = 32.7 bits (73), Expect = 9.1 Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 32/143 (22%) Frame = +2 Query: 311 LRDNQTLILVGETGSGKTTQIP---QFVLEAEGLSNRSMVACTQPXXXXXXXXXXXXXEE 481 ++ + T+ LVG +GSGK+T + ++ G N S V T+ +E Sbjct: 1084 IKKSTTVALVGPSGSGKSTCVQLLLRYYDPVSGSVNLSGVPSTEFPLDTLRSKLGLVSQE 1143 Query: 482 ---MDVTIGEEVGYSIRFEDCSSHKTVLK--------------------------YLTDG 574 D TI E + Y F D S + +++ L+ G Sbjct: 1144 PVLFDRTIAENIAYGNNFRDDVSMQEIIEAAKKSNIHNFISALPQGYDTRLGKTSQLSGG 1203 Query: 575 MLLREAMADPLLERYKVIVLDEA 643 R A+A L+ K+++LDEA Sbjct: 1204 QKQRIAIARALVRNPKILILDEA 1226
>O35795:ENTP2_RAT Ectonucleoside triphosphate diphosphohydrolase 2 - Rattus| norvegicus (Rat) Length = 495 Score = 32.7 bits (73), Expect = 9.1 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = -2 Query: 580 KHTICQIFENSFVTAAIFESDTVTNFLPDCDIHLLRDTPRDRHCSNPPWLGA 425 +H+ C + + +++ + L C LRD PRDRH S P +LGA Sbjct: 71 QHSSCDV-QGGGISSYANDPSKAGQSLVRCLEQALRDVPRDRHASTPLYLGA 121
>Q9ULD5:ZN777_HUMAN Zinc finger protein 777 - Homo sapiens (Human)| Length = 760 Score = 29.6 bits (65), Expect(2) = 9.2 Identities = 17/65 (26%), Positives = 33/65 (50%) Frame = +2 Query: 929 EEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQKIFDPAPPPLKEGGPAGRKI 1108 EEE E+ ++ + + ++G G + +Y T P + +PPPL+ G PA +++ Sbjct: 458 EEEEEEEEDELPQHLQSLGQLSGRYEA-SMYQTPLPGEMSPEGEESPPPLQLGNPAVKRL 516 Query: 1109 VVSTN 1123 S + Sbjct: 517 APSVH 521 Score = 21.6 bits (44), Expect(2) = 9.2 Identities = 7/26 (26%), Positives = 16/26 (61%) Frame = +3 Query: 1212 GWNPFWCLQFPRQVRIKELVVLEERS 1289 G PF C++ + R+K +++ +R+ Sbjct: 542 GERPFTCMECGKSFRLKINLIIHQRN 567 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 536,879,496 Number of extensions: 12476986 Number of successful extensions: 37774 Number of sequences better than 10.0: 130 Number of HSP's gapped: 37411 Number of HSP's successfully gapped: 205 Length of query: 989 Length of database: 100,686,439 Length adjustment: 123 Effective length of query: 866 Effective length of database: 66,948,154 Effective search space: 57977101364 Effective search space used: 57977101364 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
