ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf43e06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AB072337:Os06g0514800 | 109 | 2e-24 | 2 | AK062831:Os06g0514100 | 108 | 2e-24 | 3 | Os06g0512700:Os06g0512700 | 107 | 5e-24 | 4 | Os06g0517700:Os06g0517700 | 95 | 5e-20 | 5 | AK068084:Os09g0536400 | 31 | 0.63 | 6 | AK111992:Os07g0647800 | 30 | 1.8 | 7 | AK120766:Os04g0615700 | 30 | 1.8 | 8 | Os07g0429600:Os07g0429600 | 29 | 2.4 | 9 | Os07g0429700:Os07g0429700 | 28 | 4.1 | 10 | AK107521:Os04g0615800 | 28 | 5.3 | 11 | AK101759:Os01g0765300 | 28 | 7.0 | 12 | AK102102:Os12g0527800 | 27 | 9.1 |
|---|
>AB072337:Os06g0514800 | Length = 135 Score = 109 bits (272), Expect = 2e-24 Identities = 50/109 (45%), Positives = 62/109 (56%) Frame = +1 Query: 121 EHVQVEGKSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCPRDYPKLNLLPEY 300 E +QVE KSCC +TT RN YN+CRFAGGSR CA GCKI+ G C Y L PE Sbjct: 21 EKIQVEAKSCCPSTTARNVYNSCRFAGGSRDTCAKLSGCKIVDG-NCKPPYVHHTLHPEA 79 Query: 301 GEPNATEYCTIGCMTSVCDNMDNVFRGQEMKFNMGLCSNTCVRFCNDGA 447 E ++C +GC +SVC M +F +E + C+ C RFC A Sbjct: 80 EESEVVDFCKLGCASSVCSTMSTLFANEEANHAVDRCNEACRRFCTKEA 128
>AK062831:Os06g0514100 | Length = 135 Score = 108 bits (271), Expect = 2e-24 Identities = 50/109 (45%), Positives = 62/109 (56%) Frame = +1 Query: 121 EHVQVEGKSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCPRDYPKLNLLPEY 300 E +QVE KSCC +TT RN YN+CRFAGGSR CA GCKI+ G C Y L PE Sbjct: 21 EKIQVEAKSCCPSTTARNVYNSCRFAGGSRNTCAKLSGCKIVDG-NCEPPYVHHTLHPEA 79 Query: 301 GEPNATEYCTIGCMTSVCDNMDNVFRGQEMKFNMGLCSNTCVRFCNDGA 447 E ++C +GC +SVC M +F +E + C+ C RFC A Sbjct: 80 EESEVVDFCKLGCASSVCSTMSTLFANEEANHAVDRCNEACRRFCTKEA 128
>Os06g0512700:Os06g0512700 | Length = 135 Score = 107 bits (268), Expect = 5e-24 Identities = 49/109 (44%), Positives = 63/109 (57%) Frame = +1 Query: 121 EHVQVEGKSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCPRDYPKLNLLPEY 300 E +QVE KSCC +TT RN YN+CRFAGGSR CA GCKI+ G C Y L PE Sbjct: 21 EKIQVEAKSCCPSTTARNVYNSCRFAGGSRDTCAKLSGCKIVDG-NCKPPYVHHTLHPEA 79 Query: 301 GEPNATEYCTIGCMTSVCDNMDNVFRGQEMKFNMGLCSNTCVRFCNDGA 447 E ++C +GC +SVC M + +E + + C++ C RFC A Sbjct: 80 EESEVLDFCKLGCASSVCSTMSTLSSNEEANYAVDRCNDACHRFCTKEA 128
>Os06g0517700:Os06g0517700 | Length = 135 Score = 94.7 bits (234), Expect = 5e-20 Identities = 46/114 (40%), Positives = 63/114 (55%) Frame = +1 Query: 121 EHVQVEGKSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCPRDYPKLNLLPEY 300 E ++V KSCC TT RN YNACRFA G+R C+ GCKI+ G C Y L PE Sbjct: 21 ETIKVGAKSCCPTTTARNIYNACRFAHGTRERCSKLSGCKIVDG-KCKPPYIHHTLHPES 79 Query: 301 GEPNATEYCTIGCMTSVCDNMDNVFRGQEMKFNMGLCSNTCVRFCNDGAVIQSV 462 E + ++C +GC +SVC N++ +E + C+ C FCN A I ++ Sbjct: 80 EELDVLDFCMLGCTSSVCSNINTFAGNEEGNGAVERCNEACYHFCNKEADIVTI 133
>AK068084:Os09g0536400 | Length = 312 Score = 31.2 bits (69), Expect = 0.63 Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 1/100 (1%) Frame = +1 Query: 136 EGKSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCPRDYPKLNLLPEYGEPNA 315 +GK C + CR AG + P AT + SG +DY ++L+ Y P Sbjct: 93 DGKGTCATGDCGSGEVECRGAGATPP--ATLVEFTLGSGGGGGKDYYDVSLVDGYNLPMV 150 Query: 316 TEYCTIGCMTSVCDNMDNVFRGQEMKFNMG-LCSNTCVRF 432 E GC + C N E+K G C + C F Sbjct: 151 VEAAAAGCPATGCVVDLNQRCPAELKAGHGQACRSACEAF 190
>AK111992:Os07g0647800 | Length = 180 Score = 29.6 bits (65), Expect = 1.8 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = -1 Query: 427 GHMCCCRVPC*ISSLGHEKHCPCCHKR 347 GHMCCC ++ H +CP C +R Sbjct: 149 GHMCCC-----MNCSSHLTNCPLCRRR 170
>AK120766:Os04g0615700 | Length = 1034 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Frame = +3 Query: 90 YLCSHTGFSSGACPSRRQELLQEH-----DGQKLLQRLPF 194 YLCSH G + P+ LL EH D QKL+ L F Sbjct: 920 YLCSHNGLIGTSRPTHYYSLLDEHGFASDDLQKLVYNLCF 959
>Os07g0429600:Os07g0429600 | Length = 107 Score = 29.3 bits (64), Expect = 2.4 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +1 Query: 148 CCKNTTGRNCYNACRFAGGSRPVCATAC 231 CC ++ + C C AGGS VC C Sbjct: 32 CCISSRAKACCVGCIAAGGSNSVCKNTC 59
>Os07g0429700:Os07g0429700 | Length = 95 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +1 Query: 148 CCKNTTGRNCYNACRFAGGSRPVCATAC 231 CC ++ + C C AGGS VC C Sbjct: 32 CCISSRAKACCFGCIAAGGSDSVCKNTC 59
>AK107521:Os04g0615800 | Length = 523 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Frame = +3 Query: 90 YLCSHTGFSSGACPSRRQELLQEH-----DGQKLLQRLPF 194 YLCSH G + P+ LL EH D QKL+ L F Sbjct: 368 YLCSHKGEVGTSRPTHYYSLLDEHGFASDDLQKLVYNLCF 407
>AK101759:Os01g0765300 | Length = 598 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/38 (28%), Positives = 19/38 (50%) Frame = -3 Query: 404 PMLNFISWPRKTLSMLSQTEVMHPIVQYSVAFGSPYSG 291 P+ NF+ +P K +++ +MH + Y GS G Sbjct: 31 PLANFLFYPPKNFALVEYGNIMHAVHAYGCMQGSSVWG 68
>AK102102:Os12g0527800 | Length = 688 Score = 27.3 bits (59), Expect = 9.1 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 8/124 (6%) Frame = +1 Query: 148 CCKNTTGRNCYNACRFAGGSRP-----VCATACGCKIISG---PTCPRDYPKLNLLPEYG 303 C K+T +C + +G S C ACG + G P C + Y ++P Sbjct: 98 CPKHTRCHSCGSGVPGSGHSTRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSEVIPMVC 157 Query: 304 EPNATEYCTIGCMTSVCDNMDNVFRGQEMKFNMGLCSNTCVRFCNDGAVIQSVEA*SCLL 483 ++ I C + Q +++ G C C + + ++ + ++ Sbjct: 158 CDVCEKWVHIECDGISEEKYQQFQSDQNLQYTCGACRGECSQIRDTEDAVRELWKRRDVV 217 Query: 484 GHDL 495 HDL Sbjct: 218 DHDL 221 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 17,932,504 Number of extensions: 386799 Number of successful extensions: 877 Number of sequences better than 10.0: 12 Number of HSP's gapped: 873 Number of HSP's successfully gapped: 12 Length of query: 217 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 120 Effective length of database: 11,515,878 Effective search space: 1381905360 Effective search space used: 1381905360 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
