ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf43e06 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os06g31280:12006.t02829:unspliced-genomic leaf-specific thionin BTH6 precursor, putative| Length = 711 Score = 78.0 bits (164), Expect(3) = 4e-19 Identities = 28/48 (58%), Positives = 32/48 (66%) Frame = +1 / +1 Query: 121 EHVQVEGKSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCP 264 EH+QVE KSCC +TT RN YN+CRF G SR C GCKI+ G P Sbjct: 61 EHIQVEAKSCCPSTTARNIYNSCRFTGASRDKCCKISGCKIVDGKCKP 204 Score = 31.8 bits (63), Expect(3) = 4e-19 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +1 / +2 Query: 304 EPNATEYCTIGCMTSVCDNMD 366 E + ++C +GC +SVC NM+ Sbjct: 440 ESDVLDFCKLGCTSSVCSNMN 502 Score = 24.4 bits (47), Expect(3) = 4e-19 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = +1 / +1 Query: 409 CSNTCVRFCNDGAVIQSVEA* 471 C+ C RFC + A I +V +* Sbjct: 649 CNEACYRFCTNEAEIVTVAS* 711
>LOC_Os06g31960:12006.t02895:unspliced-genomic thionin precursor, putative, expressed| Length = 1109 Score = 80.8 bits (170), Expect(2) = 7e-17 Identities = 30/48 (62%), Positives = 34/48 (70%) Frame = +1 / +3 Query: 121 EHVQVEGKSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCP 264 E +QVE KSCC +TT RN YN+CRFAGGSR CA GCKI+ G P Sbjct: 162 EKIQVEAKSCCPSTTARNVYNSCRFAGGSRDTCAKLSGCKIVDGNCKP 305 Score = 28.6 bits (56), Expect(2) = 7e-17 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +1 / +1 Query: 304 EPNATEYCTIGCMTSVCDNM 363 E ++C +GC +SVC M Sbjct: 523 ESEVVDFCKLGCASSVCSTM 582 Score = 34.1 bits (68), Expect = 0.99 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 / -2 Query: 251 PLMILQPQAVAQTGREPPAKR 189 P ILQP+++AQ EPPAKR Sbjct: 292 PSTILQPESLAQVSLEPPAKR 230 Score = 31.3 bits (62), Expect = 6.7 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +3 / +2 Query: 129 PSRRQELLQEHDGQKLLQRLPFRRWFPTSLRNCLWL*N 242 P +ELL H +K L +PFR W L WL N Sbjct: 170 PGGSKELLPIHHSKKRL*LMPFRGWLKRHLC*TFWLQN 283
>LOC_Os06g31890:12006.t02888:unspliced-genomic thionin precursor, putative, expressed| Length = 1108 Score = 80.8 bits (170), Expect(2) = 7e-17 Identities = 30/48 (62%), Positives = 34/48 (70%) Frame = +1 / +2 Query: 121 EHVQVEGKSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCP 264 E +QVE KSCC +TT RN YN+CRFAGGSR CA GCKI+ G P Sbjct: 161 EKIQVEAKSCCPSTTARNVYNSCRFAGGSRDTCAKLSGCKIVDGNCKP 304 Score = 28.6 bits (56), Expect(2) = 7e-17 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +1 / +3 Query: 304 EPNATEYCTIGCMTSVCDNM 363 E ++C +GC +SVC M Sbjct: 522 ESEVVDFCKLGCASSVCSTM 581 Score = 34.1 bits (68), Expect = 0.99 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 / -2 Query: 251 PLMILQPQAVAQTGREPPAKR 189 P ILQP+++AQ EPPAKR Sbjct: 291 PSTILQPESLAQVSLEPPAKR 229 Score = 31.8 bits (63), Expect = 4.9 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +3 / +1 Query: 129 PSRRQELLQEHDGQKLLQRLPFRRWFPTSLRNCLWL*N 242 P +ELL H +K L +PFR W L WL N Sbjct: 169 PGGSKELLPIHHSKKCL*LMPFRGWLKRHLC*TFWLQN 282
>LOC_Os06g32020:12006.t02900:unspliced-genomic thionin precursor, putative, expressed| Length = 1121 Score = 80.8 bits (170), Expect(2) = 7e-17 Identities = 30/48 (62%), Positives = 34/48 (70%) Frame = +1 / +2 Query: 121 EHVQVEGKSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCP 264 E +QVE KSCC +TT RN YN+CRFAGGSR CA GCKI+ G P Sbjct: 158 EKIQVEAKSCCPSTTARNVYNSCRFAGGSRDTCAKLSGCKIVDGNCKP 301 Score = 28.6 bits (56), Expect(2) = 7e-17 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +1 / +3 Query: 304 EPNATEYCTIGCMTSVCDNM 363 E ++C +GC +SVC M Sbjct: 519 ESEVVDFCKLGCASSVCSTM 578 Score = 34.1 bits (68), Expect = 0.99 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 / -3 Query: 251 PLMILQPQAVAQTGREPPAKR 189 P ILQP+++AQ EPPAKR Sbjct: 288 PSTILQPESLAQVSLEPPAKR 226 Score = 31.3 bits (62), Expect = 6.7 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +3 / +1 Query: 129 PSRRQELLQEHDGQKLLQRLPFRRWFPTSLRNCLWL*N 242 P +ELL H +K L +PFR W L WL N Sbjct: 166 PGGSKELLPIHHSKKRL*LMPFRGWLKRHLC*TFWLQN 279
>LOC_Os06g31930:12006.t02892:unspliced-genomic thionin precursor, putative, expressed| Length = 1134 Score = 80.8 bits (170), Expect(2) = 7e-17 Identities = 30/48 (62%), Positives = 34/48 (70%) Frame = +1 / +2 Query: 121 EHVQVEGKSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCP 264 E +QVE KSCC +TT RN YN+CRFAGGSR CA GCKI+ G P Sbjct: 146 EKIQVEAKSCCPSTTARNVYNSCRFAGGSRDTCAKLSGCKIVDGNCKP 289 Score = 28.6 bits (56), Expect(2) = 7e-17 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +1 / +3 Query: 304 EPNATEYCTIGCMTSVCDNM 363 E ++C +GC +SVC M Sbjct: 507 ESEVVDFCKLGCASSVCSTM 566 Score = 34.1 bits (68), Expect = 0.99 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 / -1 Query: 251 PLMILQPQAVAQTGREPPAKR 189 P ILQP+++AQ EPPAKR Sbjct: 276 PSTILQPESLAQVSLEPPAKR 214 Score = 31.3 bits (62), Expect = 6.7 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +3 / +1 Query: 129 PSRRQELLQEHDGQKLLQRLPFRRWFPTSLRNCLWL*N 242 P +ELL H +K L +PFR W L WL N Sbjct: 154 PGGSKELLPIHHSKKRL*LMPFRGWLKRHLC*TFWLQN 267
>LOC_Os06g32240:12006.t02922:unspliced-genomic thionin precursor, putative, expressed| Length = 1338 Score = 80.8 bits (170), Expect(2) = 8e-17 Identities = 30/48 (62%), Positives = 34/48 (70%) Frame = +1 / +1 Query: 121 EHVQVEGKSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCP 264 E +QVE KSCC +TT RN YN+CRFAGGSR CA GCKI+ G P Sbjct: 349 EKIQVEAKSCCPSTTARNVYNSCRFAGGSRDTCAKLSGCKIVDGNCKP 492 Score = 28.6 bits (56), Expect(2) = 8e-17 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +1 / +2 Query: 304 EPNATEYCTIGCMTSVCDNM 363 E ++C +GC +SVC M Sbjct: 710 ESEVVDFCKLGCASSVCSTM 769 Score = 34.1 bits (68), Expect = 0.99 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 / -2 Query: 251 PLMILQPQAVAQTGREPPAKR 189 P ILQP+++AQ EPPAKR Sbjct: 479 PSTILQPESLAQVSLEPPAKR 417
>LOC_Os06g31800:12006.t02879:unspliced-genomic thionin precursor, putative, expressed| Length = 1143 Score = 80.8 bits (170), Expect(2) = 1e-16 Identities = 30/48 (62%), Positives = 34/48 (70%) Frame = +1 / +2 Query: 121 EHVQVEGKSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCP 264 E +QVE KSCC +TT RN YN+CRFAGGSR CA GCKI+ G P Sbjct: 158 EKIQVEAKSCCPSTTARNVYNSCRFAGGSRDTCAKLSGCKIVDGNCKP 301 Score = 28.1 bits (55), Expect(2) = 1e-16 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +1 / +3 Query: 304 EPNATEYCTIGCMTSVCDNM 363 E ++C +GC +SVC M Sbjct: 519 ESEVLDFCKLGCASSVCSTM 578 Score = 34.1 bits (68), Expect = 0.99 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 / -1 Query: 251 PLMILQPQAVAQTGREPPAKR 189 P ILQP+++AQ EPPAKR Sbjct: 288 PSTILQPESLAQVSLEPPAKR 226 Score = 31.3 bits (62), Expect = 6.7 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +3 / +1 Query: 129 PSRRQELLQEHDGQKLLQRLPFRRWFPTSLRNCLWL*N 242 P +ELL H +K L +PFR W L WL N Sbjct: 166 PGGSKELLPIHHSKKRL*LMPFRGWLKRHLC*TFWLQN 279
>LOC_Os06g32160:12006.t02914:unspliced-genomic thionin precursor, putative, expressed| Length = 1155 Score = 79.9 bits (168), Expect(2) = 1e-16 Identities = 29/44 (65%), Positives = 33/44 (75%) Frame = +1 / +2 Query: 121 EHVQVEGKSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISG 252 E +QVE KSCC +TT RN YN+CRFAGGSR CA GCKI+ G Sbjct: 161 EKIQVEAKSCCPSTTARNVYNSCRFAGGSRNTCAKLSGCKIVDG 292 Score = 28.6 bits (56), Expect(2) = 1e-16 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +1 / +3 Query: 304 EPNATEYCTIGCMTSVCDNM 363 E ++C +GC +SVC M Sbjct: 522 ESEVVDFCKLGCASSVCSTM 581 Score = 32.7 bits (65), Expect = 2.6 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 / -1 Query: 251 PLMILQPQAVAQTGREPPAKR 189 P ILQP+++AQ EPPAKR Sbjct: 291 PSTILQPESLAQVFLEPPAKR 229 Score = 31.3 bits (62), Expect = 6.7 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +3 / +1 Query: 129 PSRRQELLQEHDGQKLLQRLPFRRWFPTSLRNCLWL*N 242 P +ELL H +K L +PFR W L WL N Sbjct: 169 PGGSKELLPIHHSKKRL*LMPFRGWLKKHLC*TFWLQN 282
>LOC_Os06g32550:12006.t02953:unspliced-genomic leaf-specific thionin BTH6 precursor, putative, expressed| Length = 736 Score = 71.2 bits (149), Expect(2) = 9e-15 Identities = 27/48 (56%), Positives = 32/48 (66%) Frame = +1 / +1 Query: 121 EHVQVEGKSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCP 264 E ++VE KSCC TT RN YNACRFA G+R C+ GCKI+ G P Sbjct: 151 ETIKVEAKSCCPTTTARNIYNACRFALGTRERCSKLSGCKIVDGKCKP 294 Score = 30.4 bits (60), Expect(2) = 9e-15 Identities = 8/21 (38%), Positives = 15/21 (71%) Frame = +1 / +1 Query: 304 EPNATEYCTIGCMTSVCDNMD 366 E + ++C +GC +S+C NM+ Sbjct: 463 ESDVLDFCMLGCTSSMCSNMN 525
>LOC_Os06g32600:12006.t02958:unspliced-genomic leaf-specific thionin BTH6 precursor, putative, expressed| Length = 1041 Score = 68.9 bits (144), Expect(2) = 2e-13 Identities = 26/48 (54%), Positives = 31/48 (64%) Frame = +1 / +1 Query: 121 EHVQVEGKSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCP 264 E ++V KSCC TT RN YNACRFA G+R C+ GCKI+ G P Sbjct: 151 ETIKVGAKSCCPTTTARNIYNACRFAHGTRERCSKLSGCKIVDGKCKP 294 Score = 29.0 bits (57), Expect(2) = 2e-13 Identities = 8/21 (38%), Positives = 15/21 (71%) Frame = +1 / +1 Query: 304 EPNATEYCTIGCMTSVCDNMD 366 E + ++C +GC +SVC N++ Sbjct: 478 ELDVLDFCMLGCTSSVCSNIN 540 Score = 32.2 bits (64), Expect = 3.6 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +3 / +3 Query: 141 QELLQEHDGQKLLQRLPFRRWFPTSLRNCLWL*N 242 +ELL H G+K L +PF W + LWL*N Sbjct: 171 KELLPNHHGKKHL*CMPFCAWHKGKMF*TLWL*N 272
>LOC_Os06g32350:12006.t02933:unspliced-genomic leaf-specific thionin precursor, putative| Length = 634 Score = 67.5 bits (141), Expect(2) = 3e-12 Identities = 26/48 (54%), Positives = 30/48 (62%) Frame = +1 / +1 Query: 121 EHVQVEGKSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCP 264 E + VE KSCC +T+ RN YN+CRFAGGSR CA CK G P Sbjct: 61 EKIHVEAKSCCPSTSVRNVYNSCRFAGGSREACAKLSTCKHFDGSCQP 204 Score = 25.4 bits (49), Expect(2) = 3e-12 Identities = 6/16 (37%), Positives = 12/16 (75%) Frame = +1 / +3 Query: 319 EYCTIGCMTSVCDNMD 366 ++C +GC +SVC ++ Sbjct: 396 DFCKLGCTSSVCSKIN 443
>LOC_Os06g32290:12006.t02927:unspliced-genomic hypothetical protein| Length = 1076 Score = 39.1 bits (79), Expect(3) = 3e-11 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = +1 / +1 Query: 121 EHVQVEGKSCCKNTTGRNCYNA 186 E +QVE KSCC +T RN YNA Sbjct: 61 EKIQVEAKSCCPSTIARNVYNA 126 Score = 37.3 bits (75), Expect(3) = 3e-11 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = +1 / +2 Query: 181 NACRFAGGSRPVCATACGCKIISGPTCP 264 N+CRFAGGSR A G KI+ G P Sbjct: 458 NSCRFAGGSRDTSAKLSGYKIVDGKCKP 541 Score = 32.2 bits (64), Expect(3) = 3e-11 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +1 / +2 Query: 319 EYCTIGCMTSVCDNMDNVFRGQEMKFN 399 ++C +GC +SVC M+ R + +K N Sbjct: 773 DFCKMGCTSSVCSTMNTCKRKKNIKLN 853
>LOC_Os06g32370:12006.t02935:unspliced-genomic leaf-specific thionin precursor, putative| Length = 447 Score = 68.9 bits (144), Expect = 3e-11 Identities = 26/48 (54%), Positives = 30/48 (62%) Frame = +1 / +1 Query: 121 EHVQVEGKSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCP 264 E + VE KSCC +T+ RN YN+CRFAGGSR CA CK G P Sbjct: 61 EKIHVEAKSCCPSTSARNVYNSCRFAGGSREACAKLSTCKHFDGSCQP 204 Score = 52.8 bits (109), Expect = 2e-06 Identities = 20/39 (51%), Positives = 23/39 (58%) Frame = +1 / +1 Query: 148 CCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCP 264 CC ++T RN Y +CRF GGS CA GCKI G P Sbjct: 241 CCPSSTARNIYTSCRFVGGSYDSCARLSGCKIDFGRCQP 357 Score = 31.8 bits (63), Expect = 4.9 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = -3 / -2 Query: 251 PLMILQPQAVAQTGREPPAKR 189 P ILQP+++AQ EPP KR Sbjct: 344 PKSILQPESLAQESYEPPTKR 282
>LOC_Os06g12340:12006.t01111:unspliced-genomic hypothetical protein| Length = 738 Score = 29.9 bits (59), Expect(2) = 0.26 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = -3 / -1 Query: 302 PYSGRRFSLG*SLGHVGPLMILQPQAVAQTGREPPAKRQA 183 P + RR LG PL+ LQP VA + + A RQ+ Sbjct: 294 PPACRRHHRSPHLGSSAPLLALQPATVASSSSQAQAHRQS 175 Score = 23.5 bits (45), Expect(2) = 0.26 Identities = 6/8 (75%), Positives = 6/8 (75%) Frame = -1 / -3 Query: 370 HCPCCHKR 347 HC CCH R Sbjct: 331 HCRCCHHR 308
>LOC_Os11g48040:12011.t04297:unspliced-genomic mitochondrial uncoupling protein 3, putative, expressed| Length = 3945 Score = 35.9 bits (72), Expect = 0.28 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -1 / -1 Query: 376 EKHCPCCHKRKSCIQLCSTQSHLVHR 299 + H PC H K LC+T+S+ VH+ Sbjct: 3153 DDHSPCSHSSKCVFALCNTESYTVHK 3076 Score = 35.9 bits (72), Expect = 0.28 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -1 / -2 Query: 376 EKHCPCCHKRKSCIQLCSTQSHLVHR 299 + H PC H K LC+T+S+ VH+ Sbjct: 3035 DDHSPCSHSSKCVFALCNTESYTVHK 2958
>LOC_Os06g37000:12006.t03395:unspliced-genomic heterogeneous nuclear ribonucleoprotein A3, putative, expressed| Length = 4840 Score = 35.4 bits (71), Expect = 0.39 Identities = 14/38 (36%), Positives = 17/38 (44%) Frame = -1 / -2 Query: 511 YELGHINHAQEGMIRLQQTE*PHHHYRNGHMCCCRVPC 398 + L H H +LQQ HHH + H CCC C Sbjct: 3576 HNLCHSQHNLCYRNKLQQLTDSHHHIHHSHRCCCFQNC 3463
>LOC_Os10g18510:12010.t01399:unspliced-genomic cytokinin-O-glucosyltransferase 2, putative, expressed| Length = 2337 Score = 34.5 bits (69), Expect = 0.73 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 / +1 Query: 184 ACRFAGGSRPVCATACGCKIISGPTCP 264 +CR AGG+RP A+ C+ GPT P Sbjct: 1960 SCRTAGGTRPWRASGTACRSWRGPTSP 2040
>LOC_Os03g55040:12003.t04769:unspliced-genomic indole-3-acetate beta-glucosyltransferase, putative, expressed| Length = 2136 Score = 27.6 bits (54), Expect(2) = 1.8 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = +1 / +1 Query: 169 RNCYNACRFAGGSRPVCATACGCKIISGPTCP 264 R + +CR AGG+R + C+ +G T P Sbjct: 1531 RRSHASCRTAGGTRRWKGSGMVCRFCAGRTSP 1626 Score = 26.3 bits (51), Expect(2) = 1.8 Identities = 12/39 (30%), Positives = 17/39 (43%) Frame = +3 / +2 Query: 75 Y*KCGYLCSHTGFSSGACPSRRQELLQEHDGQKLLQRLP 191 Y CG L S T C +R + ++ HD + R P Sbjct: 935 YYSCG*LRSRTYNHFRECEEKRDDPIETHDAARSSSRAP 1051
>LOC_Os08g31780:12008.t02923:unspliced-genomic mla1, putative, expressed| Length = 3635 Score = 33.1 bits (66), Expect = 1.9 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 / +2 Query: 130 QVEGKSCCKNTTGRNCYNACRFAGGSR 210 Q+ K CCK + + C F GGSR Sbjct: 1070 QISSKECCKIAGNSSFFKLCHFLGGSR 1150
>LOC_Os01g10690:12001.t00942:unspliced-genomic expressed protein| Length = 5302 Score = 33.1 bits (66), Expect = 1.9 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 286 LLPEYGEPNATEYCTIGCM 342 LL EYG A E CT+GCM Sbjct: 4987 LLDEYGNDMACEVCTVGCM 5043
>LOC_Os06g47330:12006.t04419:unspliced-genomic EH-domain-containing protein 1, putative, expressed| Length = 5268 Score = 29.5 bits (58), Expect(2) = 2.2 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +2 / +1 Query: 488 MIYMTKFVLSFCLELSRYHQRYRSKCIILVMYFCFTLV 601 ++++ LSFC+ +RY S C ILV C T + Sbjct: 1282 VMFVLFIFLSFCVLNNRYLHEP*SSCKILVSSICITFI 1395 Score = 25.4 bits (49), Expect(2) = 2.2 Identities = 8/18 (44%), Positives = 10/18 (55%) Frame = +3 / +1 Query: 90 YLCSHTGFSSGACPSRRQ 143 YLC+H GF P+ Q Sbjct: 1201 YLCNHAGFPQAQSPATSQ 1254
>LOC_Os03g47550:12003.t04113:unspliced-genomic FHY1, putative, expressed| Length = 2569 Score = 24.9 bits (48), Expect(2) = 2.6 Identities = 12/32 (37%), Positives = 15/32 (46%) Frame = +3 / +1 Query: 369 CFSWPRDEIQHGTLQQHMCPFL**WCGHSVC* 464 CF P D+I+H + P L C S C* Sbjct: 1660 CFCSPEDDIRHWSKFPSFTPLLVFCCLSSCC* 1755 Score = 24.9 bits (48), Expect(2) = 2.6 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +3 / +1 Query: 465 SLIMPSWA*FI*PSSYCHFVLNY 533 +++ SW I*P Y H +LNY Sbjct: 1846 TMLTYSWYCTI*PFMYVHHLLNY 1914
>LOC_Os03g27960:12003.t02469:unspliced-genomic vacuolar cation/proton exchanger 2, putative, expressed| Length = 4019 Score = 26.7 bits (52), Expect(2) = 3.4 Identities = 9/27 (33%), Positives = 15/27 (55%) Frame = -1 / -2 Query: 385 LGHEKHCPCCHKRKSCIQLCSTQSHLV 305 L H+ H C+K+ C++ Q HL+ Sbjct: 2794 LQHKCHHQYCYKKSCCLEQLKIQVHLL 2714 Score = 22.6 bits (43), Expect(2) = 3.4 Identities = 6/12 (50%), Positives = 10/12 (83%) Frame = -2 / -1 Query: 255 WAAYDFTTTSSC 220 W +++ TTT+SC Sbjct: 2648 WNSFNITTTTSC 2613
>LOC_Os03g41612:12003.t03572:unspliced-genomic 5S rRNA binding protein, putative, expressed| Length = 4755 Score = 32.2 bits (64), Expect = 3.5 Identities = 17/60 (28%), Positives = 28/60 (46%) Frame = -3 / +1 Query: 455 *MTAPSLQKRTHVLLQSPMLNFISWPRKTLSMLSQTEVMHPIVQYSVAFGSPYSGRRFSL 276 *MT+PS+++ + + P L+ SWPR LS + Y + SP + + L Sbjct: 4381 *MTSPSIRR*GY*VKTRPCLSARSWPRNQLSRGIHANFWSLVTMYPSWYSSPVTSSPYVL 4560
>LOC_Os02g45830:12002.t04170:unspliced-genomic expressed protein| Length = 3227 Score = 32.2 bits (64), Expect = 3.5 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = +3 / +3 Query: 327 HNWMHDFRL*QHGQCFSWPRDEI 395 H W + QHG C WPR+++ Sbjct: 1605 HGWCRSGVVTQHGTCAGWPREDV 1673
>LOC_Os09g23300:12009.t02014:unspliced-genomic protein CCC1, putative, expressed| Length = 1787 Score = 32.2 bits (64), Expect = 3.6 Identities = 14/43 (32%), Positives = 19/43 (44%) Frame = +1 / +3 Query: 148 CCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCPRDYP 276 CC +T R+ R++ S TA C+ S P CP P Sbjct: 207 CCWTSTPRSTSPPARWSATSSSASPTASPCRSPSPPACPAPTP 335
>LOC_Os07g24820:12007.t02178:unspliced-genomic thionin-like peptide, putative| Length = 567 Score = 32.2 bits (64), Expect = 3.6 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +1 / +1 Query: 148 CCKNTTGRNCYNACRFAGGSRPVCATAC 231 CC ++ + C C AGGS VC C Sbjct: 94 CCISSRAKACCVGCIAAGGSNSVCKNTC 177
>LOC_Os06g45940:12006.t04282:unspliced-genomic potassium transporter 13, putative, expressed| Length = 7530 Score = 32.2 bits (64), Expect = 3.6 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +1 / -3 Query: 154 KNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCP 264 + T+ R CR GG ++A G + SGPTCP Sbjct: 6760 RRTSDRRRLRRCRPGGGGTRRPSSAVGSRS*SGPTCP 6650
>LOC_Os05g28390:12005.t02488:unspliced-genomic hypothetical protein| Length = 699 Score = 32.2 bits (64), Expect = 3.6 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = -1 / -1 Query: 367 CPCCHKRKSCIQLCSTQSHLVHRI 296 CP C +R+ C+ S S L+HR+ Sbjct: 192 CPSCRRRRPCVAAGSPPSSLLHRL 121
>LOC_Os03g02650:12003.t00154:unspliced-genomic expressed protein| Length = 955 Score = 32.2 bits (64), Expect = 3.6 Identities = 11/27 (40%), Positives = 12/27 (44%) Frame = +1 / -2 Query: 187 CRFAGGSRPVCATACGCKIISGPTCPR 267 C G RP C GC+ G CPR Sbjct: 249 CPARGSPRPTCRCGAGCRGTPGALCPR 169
>LOC_Os02g53660:12002.t04945:unspliced-genomic expressed protein| Length = 1152 Score = 32.2 bits (64), Expect = 3.6 Identities = 12/40 (30%), Positives = 19/40 (47%) Frame = +1 / +2 Query: 142 KSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTC 261 KSCC + R R A P C+++ C+ + P+C Sbjct: 734 KSCCARSAWRRRARGPRRAASPAPTCSSSRACRRSTTPSC 853
>LOC_Os11g42410:12011.t03772:unspliced-genomic expressed protein| Length = 3619 Score = 31.8 bits (63), Expect = 4.9 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = +1 / -1 Query: 214 VCATACGCKIISGPTCPRDYPKLNLLPEYGEPNATEYCTIGCMTSVCDN 360 +CA+ C C I+S T P +P+ N + + + + TI + VC + Sbjct: 967 LCASFCPCCILSTATKPYTFPR*NSVKTTTDKSQSHTDTIRSIACVCSS 821
>LOC_Os07g37150:12007.t03384:unspliced-genomic expressed protein| Length = 2953 Score = 31.8 bits (63), Expect = 4.9 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = +1 / -3 Query: 184 ACRFAGGSRPVCATACGCKIISGPTCPRDYPKLNL 288 A G SR VC AC C + P R P+L L Sbjct: 1820 AAHVVGSSRHVCVPACLCPLAGQPASVRAAPRLLL 1716
>LOC_Os06g22650:12006.t02079:unspliced-genomic VHS and GAT domain protein, putative, expressed| Length = 8117 Score = 31.8 bits (63), Expect = 4.9 Identities = 12/27 (44%), Positives = 13/27 (48%) Frame = -1 / +1 Query: 388 SLGHEKHCPCCHKRKSCIQLCSTQSHL 308 SLG KH PC H CI C + L Sbjct: 7378 SLGLNKHNPCTHNMVECILQCKVTNQL 7458
>LOC_Os02g45360:12002.t04123:unspliced-genomic hypothetical protein| Length = 993 Score = 31.8 bits (63), Expect = 4.9 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -2 / -1 Query: 276 RIVPRTCWAAYDFTTTSSCAD 214 R++ WA Y FTTTSS +D Sbjct: 120 RLITAAAWAYYQFTTTSSSSD 58
>LOC_Os06g33150:12006.t03012:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class, expressed| Length = 6752 Score = 29.0 bits (57), Expect(2) = 6.6 Identities = 14/27 (51%), Positives = 14/27 (51%) Frame = +1 / -1 Query: 184 ACRFAGGSRPVCATACGCKIISGPTCP 264 A R GSRP A A GC GPT P Sbjct: 3752 APRLPCGSRPSAARALGCG*RVGPTAP 3672 Score = 24.4 bits (47), Expect(2) = 6.6 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +3 / -3 Query: 123 ACPSRRQELLQEHDGQKL 176 ACPSR++ L GQK+ Sbjct: 6528 ACPSRKRLALHHWQGQKV 6475
>LOC_Os07g11190:12007.t00993:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2271 Score = 31.3 bits (62), Expect = 6.7 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = -3 / -3 Query: 416 LLQSPMLNFISWPRKTLSMLSQTEVMHPIVQY 321 L QSP+ ++WP+ L ++SQ V+ ++ Y Sbjct: 1381 LAQSPL*RLVAWPQVRLQLVSQRVVLRILLYY 1286
>LOC_Os02g14100:12002.t01206:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4820 Score = 31.3 bits (62), Expect = 6.7 Identities = 13/39 (33%), Positives = 24/39 (61%) Frame = -3 / +1 Query: 575 LR*YICFDTADGIEIIQDKMTIRTWSYKSCPRRHD*AST 459 LR* + +D GI+ + I++WS+++C +R D +T Sbjct: 1996 LR*ILHYDHDLGIDFFFKHVDIKSWSHRACQKRVDAKNT 2112
>LOC_Os10g13410:12010.t01071:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2686 Score = 31.3 bits (62), Expect = 6.7 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = -1 / +2 Query: 409 RVPC*ISSLGHEKHCPCCHKR 347 R+P ISS H KH PCC R Sbjct: 2099 RMPSFISSRSHMKHSPCCLMR 2161
>LOC_Os09g38130:12009.t03288:unspliced-genomic auxin Efflux Carrier family protein, expressed| Length = 4725 Score = 31.3 bits (62), Expect = 6.7 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +2 / +2 Query: 461 LKPNHAFLGMIYMTKFVLSFCLELSRY 541 LKP+H+FL ++YM VL L LS + Sbjct: 656 LKPSHSFLFLVYMNACVLFSFLNLSLF 736
>LOC_Os07g25050:12007.t02201:unspliced-genomic thionin-like peptide, putative, expressed| Length = 932 Score = 31.3 bits (62), Expect = 6.7 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +1 / +1 Query: 148 CCKNTTGRNCYNACRFAGGSRPVCATAC 231 CC ++ + C C AGGS VC C Sbjct: 169 CCISSRAKACCFGCIAAGGSDSVCKNTC 252
>LOC_Os07g24830:12007.t02179:unspliced-genomic thionin-like peptide, putative, expressed| Length = 892 Score = 31.3 bits (62), Expect = 6.7 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +1 / +2 Query: 148 CCKNTTGRNCYNACRFAGGSRPVCATAC 231 CC ++ + C C AGGS VC C Sbjct: 167 CCISSRAKACCFGCIAAGGSDSVCKNTC 250
>LOC_Os03g22690:12003.t02017:unspliced-genomic nucleoporin interacting component, putative, expressed| Length = 9025 Score = 31.3 bits (62), Expect = 6.7 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = -1 / +3 Query: 361 CCHKRKSCIQLCSTQSHLVHRIQ 293 CCH RK C C + HL + I+ Sbjct: 8145 CCHGRKPCGPACGPKKHLKYSIE 8213
>LOC_Os02g34960:12002.t03134:unspliced-genomic pentatricopeptide repeat protein PPR868-14, putative, expressed| Length = 1883 Score = 31.3 bits (62), Expect = 6.7 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = -1 / -2 Query: 415 CCRVPC*ISSLGHEKHCPCCHKRKSCIQLCSTQSH 311 C C S + H H CH+R++C+ L + S+ Sbjct: 1747 CDEKACPASHIFHSPHGEMCHRRRTCVLLSAPLSN 1643
>LOC_Os01g62670:12001.t05641:unspliced-genomic avr9/Cf-9 rapidly elicited protein 137, putative, expressed| Length = 2504 Score = 31.3 bits (62), Expect = 6.7 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +1 / +2 Query: 148 CCKNTTGRNCYNACRFAGGSR 210 CC+ ++GR C +C GG+R Sbjct: 1262 CCRRSSGRRCGPSCATGGGTR 1324
>LOC_Os04g02070:12004.t00104:unspliced-genomic expressed protein| Length = 6425 Score = 24.0 bits (46), Expect(2) = 7.8 Identities = 7/13 (53%), Positives = 7/13 (53%) Frame = -1 / +3 Query: 448 PHHHYRNGHMCCC 410 P Y GH CCC Sbjct: 549 PASSYGYGHSCCC 587 Score = 24.0 bits (46), Expect(2) = 7.8 Identities = 6/11 (54%), Positives = 7/11 (63%) Frame = -1 / +2 Query: 367 CPCCHKRKSCI 335 C CCH SC+ Sbjct: 599 CGCCHATDSCV 631
>LOC_Os03g03900:12003.t00271:unspliced-genomic nodule inception protein, putative, expressed| Length = 4629 Score = 27.6 bits (54), Expect(2) = 8.5 Identities = 13/44 (29%), Positives = 17/44 (38%) Frame = -1 / -1 Query: 490 HAQEGMIRLQQTE*PHHHYRNGHMCCCRVPC*ISSLGHEKHCPC 359 H G L ++ H R G CCR C ++ H PC Sbjct: 1701 HFAAGWQLLPSSQKVWHDAREGTGSCCRW*CLGRNMAHSSQMPC 1570 Score = 24.9 bits (48), Expect(2) = 8.5 Identities = 10/33 (30%), Positives = 17/33 (51%) Frame = -3 / -1 Query: 290 RRFSLG*SLGHVGPLMILQPQAVAQTGREPPAK 192 R F++G + G + +QP+ T R PP + Sbjct: 483 RSFTVGSTATSCGAVWNVQPRCAGLTSRPPPPR 385
>LOC_Os06g25050:12006.t02313:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3677 Score = 30.9 bits (61), Expect = 9.2 Identities = 17/35 (48%), Positives = 19/35 (54%) Frame = +3 / -2 Query: 186 LPFRRWFPTSLRNCLWL*NHKRPNMS*GLS*AESS 290 L RW T LR L L H+RP S +S AESS Sbjct: 1303 LHLHRWRATGLRCSLLLRCHQRPEQSFTISTAESS 1199
>LOC_Os11g42430:12011.t03774:unspliced-genomic solute carrier family 2, facilitated glucose transporter member 8,| putative, expressed Length = 3508 Score = 30.9 bits (61), Expect = 9.2 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = -1 / +2 Query: 394 ISSLGHEKHCPCCHKRKSCIQLCST 320 +S G+E C C H R +C LC++ Sbjct: 713 VSGAGNEDFCSCLHCRMACNLLCTS 787
>LOC_Os07g25060:12007.t02202:unspliced-genomic thionin-like peptide, putative, expressed| Length = 844 Score = 30.9 bits (61), Expect = 9.2 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +1 / +1 Query: 148 CCKNTTGRNCYNACRFAGGSRPVCATAC 231 CC ++ + C C AGGS +C C Sbjct: 142 CCISSRAKACCFGCIAAGGSDSICKNTC 225
>LOC_Os05g51350:12005.t04563:unspliced-genomic aspartyl protease, putative| Length = 1362 Score = 30.9 bits (61), Expect = 9.2 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -1 / -3 Query: 382 GHEKHCPCCHKRKSCIQLCSTQSHLVHRIQ 293 G+ CPCC++ ++ + L S+ S L H+ Q Sbjct: 568 GYCTGCPCCNRTRNWLGLMSSSSFLHHQEQ 479
>LOC_Os05g37060:12005.t03250:unspliced-genomic DNA binding protein, putative, expressed| Length = 1199 Score = 30.9 bits (61), Expect = 9.2 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = -1 / -1 Query: 448 PHHHYRNGHMCCCRVP 401 PHH + G CCCR P Sbjct: 431 PHHCHGRGRRCCCRRP 384
>LOC_Os04g39670:12004.t03535:unspliced-genomic expressed protein| Length = 2855 Score = 30.9 bits (61), Expect = 9.2 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = -2 / +1 Query: 354 TNGSHASNCAVLSRIWFTVFREKIQLRIVPRTCWAAYDFTTTSSCA 217 + G+H+ C + + + EK+ LR++P Y T T+ CA Sbjct: 2128 SRGAHSCRCVKVYALLHSWEGEKVHLRLLPSCLLLPYLIT*TAQCA 2265
>LOC_Os03g33190:12003.t02913:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2655 Score = 30.9 bits (61), Expect = 9.2 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = -1 / +2 Query: 235 NHKQLRRLVGNHRRNGRR 182 N +QL L+ NHRRNGRR Sbjct: 1049 NIRQLAVLMANHRRNGRR 1102
>LOC_Os02g03280:12002.t00228:unspliced-genomic bax inhibitor 1, putative, expressed| Length = 3386 Score = 30.9 bits (61), Expect = 9.2 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +1 / +1 Query: 226 ACGCKIISGPTCPRDYPKLNLL 291 +CGCKI + CPR + ++LL Sbjct: 2344 SCGCKICNVTNCPRSFSLVDLL 2409
>LOC_Os01g51190:12001.t04553:unspliced-genomic expressed protein| Length = 4567 Score = 30.9 bits (61), Expect = 9.2 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +2 / +1 Query: 512 LSFCLELSRYHQRYRSKCIILVMYFCFTLVP 604 LS CL + YH R R +I ++ FC+ + P Sbjct: 943 LSSCL*VPMYHTRCRLSFLIPILSFCYFISP 1035
>LOC_Os01g44170:12001.t03928:unspliced-genomic conserved hypothetical protein| Length = 6386 Score = 30.9 bits (61), Expect = 9.2 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +2 / +2 Query: 497 MTKFVLSFCLELSRYHQRYRSKCII 571 + FVL F LE+ +Y Q Y+ +CII Sbjct: 4157 LVNFVLKFDLEVKKYTQIYQ*RCII 4231
>LOC_Os06g37510:12006.t03446:unspliced-genomic senescence-associated protein 5, putative, expressed| Length = 2613 Score = 29.5 bits (58), Expect(2) = 9.5 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = +1 / +2 Query: 19 SHSSRETKANEPTMAISKSI 78 SHS+R T EP+MA+S +I Sbjct: 29 SHSARATAEREPSMAVSNNI 88 Score = 22.1 bits (42), Expect(2) = 9.5 Identities = 7/16 (43%), Positives = 8/16 (50%) Frame = +1 / +3 Query: 211 PVCATACGCKIISGPT 258 P C GC+I G T Sbjct: 2490 PACVVGTGCQICHGRT 2537 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 277,267,022 Number of extensions: 4672161 Number of successful extensions: 19039 Number of sequences better than 10.0: 58 Length of query: 217 Length of database: 55,613,886 Length adjustment: 48 Effective length of query: 169 Effective length of database: 52,912,542 Effective search space: 8942219598 Effective search space used: 8942219598 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
