ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf43e04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os09g0556000:Os09g0556000 332 2e-91
2Os01g0131800:Os01g0131800 174 7e-44
3AK109646:Os01g0110200 29 3.8
4AK066731:Os08g0518100 29 3.8
5Os11g0256100:Os11g0256100 29 4.9
6Os03g0716200:Os03g0716200 29 4.9
7AK110101: 29 4.9
8AK063747:Os11g0181200 28 6.4
9Os06g0283300:Os06g0283300 28 8.4
10AK064101:Os08g0462300 28 8.4

>Os09g0556000:Os09g0556000 |
          Length = 167
 Score =  332 bits (851), Expect = 2e-91
 Identities = 160/167 (95%), Positives = 164/167 (98%)
 Frame = +2

Query: 128 MHSFGHRANAVATFALTILAAMCFAASFSDSFNSPTPTASVKILNINWFQKEANANDEVS 307
           MHSFGHRANAVATFA+TILAAMCFAASFSD FNSP+PTASVKILNINWFQKEAN NDEVS
Sbjct: 1   MHSFGHRANAVATFAVTILAAMCFAASFSDHFNSPSPTASVKILNINWFQKEANGNDEVS 60

Query: 308 MTLNISADLSSLFTWNTKQVFVFVAAEYETPQNALNQVSLWDGIIPAKEHAKFLIHTTNK 487
           MTLNISADLSSLFTWNTKQVFVFVAAEYETPQNALNQVSLWDGIIP+KEHAKFLIHTTNK
Sbjct: 61  MTLNISADLSSLFTWNTKQVFVFVAAEYETPQNALNQVSLWDGIIPSKEHAKFLIHTTNK 120

Query: 488 YRFIDQGSNLKAKDFNLTMHWHIMPKTGKMFADKIVMTGYQLPEQYR 628
           YRFIDQGSNLK KDFNLTMHWHIMPKTGKMFADKIVMTGY+LPEQYR
Sbjct: 121 YRFIDQGSNLKGKDFNLTMHWHIMPKTGKMFADKIVMTGYRLPEQYR 167



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>Os01g0131800:Os01g0131800 |
          Length = 168

 Score =  174 bits (441), Expect = 7e-44
 Identities = 82/166 (49%), Positives = 111/166 (66%)
 Frame = +2

Query: 128 MHSFGHRANAVATFALTILAAMCFAASFSDSFNSPTPTASVKILNINWFQKEANANDEVS 307
           MHS+  R    AT A  +L A C AAS  D+F+ P+  A   +  IN F K+ N ND+V+
Sbjct: 1   MHSWVQRLLTTATTAALLLLAACCAASALDAFHVPSVQAQAHVTKINRFHKQLNGNDKVT 60

Query: 308 MTLNISADLSSLFTWNTKQVFVFVAAEYETPQNALNQVSLWDGIIPAKEHAKFLIHTTNK 487
           +T N+SA+L SLFTW+TKQVFVF+ AEYE  +N+LNQVSLWD IIP K+ A   +   +K
Sbjct: 61  LTFNLSANLESLFTWSTKQVFVFLTAEYENSKNSLNQVSLWDHIIPDKDKANLQVEVKSK 120

Query: 488 YRFIDQGSNLKAKDFNLTMHWHIMPKTGKMFADKIVMTGYQLPEQY 625
           Y  IDQGS+L+ K   L +HWH+MPK G M  D++ ++ + LP+ Y
Sbjct: 121 YPLIDQGSSLRGKKVQLVLHWHVMPKAGVMIRDRMALSEFNLPDSY 166



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>AK109646:Os01g0110200 |
          Length = 240

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +3

Query: 6   AKQAAKSRQEKKNRESFARDSPAPPRSSKHRQAAASPGERGCTPSGTA 149
           A   +K++  KKN+      +PAP   S    AA SP +     SG A
Sbjct: 160 APTKSKNKHRKKNKRGKKASAPAPEPLSPPAPAALSPADNQADVSGPA 207



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>AK066731:Os08g0518100 |
          Length = 834

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = -3

Query: 486 LFVVWIKNLACSFAGMIPSQRET*FRAFCGVSYSAATKTKTCFVFHVKSDERSAEM 319
           L VVW K  ACS   ++ S  E  FR  C    +         + H++S   + E+
Sbjct: 337 LLVVWDKVFACSNNMLLSSDEEYNFRILCSDRGAFIAAMAVSMLLHIRSSLLATEL 392



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>Os11g0256100:Os11g0256100 |
          Length = 582

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 15/59 (25%), Positives = 26/59 (44%)
 Frame = -2

Query: 553 VPVHRQVEVLGLQVAPLVNESVLVCGMDQKLGVLLRRYDSIPKGDLIQGILWSLILSRH 377
           +P+H +  VLG+   P    S++       L    R +D+ P  D     +W+ +L  H
Sbjct: 42  LPIHARAVVLGISANPAFATSLITAVAPACLAYARRVFDAAPSRD---AYMWNTLLRAH 97



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>Os03g0716200:Os03g0716200 |
          Length = 872

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +3

Query: 3   GAKQAAKSRQEKKNRESFARDSPAPPRSSKHRQAAASPGERGCTPSGTA 149
           G  +A  S +  +   S+    P PP      +AAA+  ER C PS  A
Sbjct: 171 GEPRAMPSMRALERLASWPTPPPPPPPPPPPAKAAAAEAERPCPPSSAA 219



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>AK110101: |
          Length = 580

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 33  EKKNRESFARDSPAPPRSSKHRQAAASPGER 125
           +KK R++ A   PA P SSK R +A+  G+R
Sbjct: 103 KKKPRKNTADTDPAQPGSSKRRASASVAGDR 133



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>AK063747:Os11g0181200 |
          Length = 79

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 70  RRRRGAASTGRQQRAPASEDALLR 141
           RR+RG A+T R++R P S  AL R
Sbjct: 13  RRKRGTATTARRRRTPTSLRALWR 36



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>Os06g0283300:Os06g0283300 |
          Length = 452

 Score = 28.1 bits (61), Expect = 8.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 64  IHRRRRGAASTGRQQRAPASEDALLRA 144
           ++RRRR +AS     R+P S  A LRA
Sbjct: 32  LYRRRRASASVAAPARSPESSTATLRA 58



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>AK064101:Os08g0462300 |
          Length = 418

 Score = 28.1 bits (61), Expect = 8.4
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 378 TKTKTCFVFHVKSDERSAEMFSVMLTSS 295
           +  + CF+  V S  RS E+FSV +TSS
Sbjct: 363 SSNEMCFIKFVLSKARSLELFSVRVTSS 390


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 23,334,765
Number of extensions: 525584
Number of successful extensions: 2063
Number of sequences better than 10.0: 10
Number of HSP's gapped: 2060
Number of HSP's successfully gapped: 10
Length of query: 292
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 192
Effective length of database: 11,395,755
Effective search space: 2187984960
Effective search space used: 2187984960
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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