ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf43d23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK069742:Os02g0592200 707 0.0
2Os03g0145000:Os03g0145000 33 0.96
3Os05g0102700:Os05g0102700 32 1.6
4AK073848:Os01g0816100 32 1.6
5AB028183:Os01g0816100 32 1.6
6AK106351:Os10g0136200 32 2.1
7AK069758:Os10g0136200 32 2.1
8Os04g0429000:Os04g0429000 31 3.6
9AK099104:Os01g0674500 30 4.8
10AK070401:Os01g0674500 30 4.8
11Os03g0732800:Os03g0732800 30 6.2
12AK121769:Os12g0145900 30 6.2
13Os08g0176200:Os08g0176200 30 8.1
14AK110062: 30 8.1
15AK110045: 30 8.1
16AK072036:Os02g0580900 30 8.1
17Os01g0916700:Os01g0916700 30 8.1
18AK110966:Os05g0457000 30 8.1

>AK069742:Os02g0592200 |
          Length = 454
 Score =  707 bits (1825), Expect = 0.0
 Identities = 341/432 (78%), Positives = 373/432 (86%)
 Frame = +3

Query: 162  SLRAATNATAVVSRIAFGSCANQSAPQPVWEAIVGFDPQVFIWLGDNVYGDNKRPFRVFG 341
            SL    +  A VSRIAFGSCANQSAPQPVWEA+VGFDPQVFIWLGDNVYGDNKRPFRVFG
Sbjct: 22   SLSLRADPGAAVSRIAFGSCANQSAPQPVWEAVVGFDPQVFIWLGDNVYGDNKRPFRVFG 81

Query: 342  RERTVGPWRNVPRFYPATEEELRGKYELAKANPGYAKLRERARVIGTWDDHDYGLNDAGK 521
            RERTVGPWRNVPRFYP+TE ELR +YE+AKA PGYAKLRERA+VIGTWDDHDYGLNDAGK
Sbjct: 82   RERTVGPWRNVPRFYPSTEAELRRRYEMAKAKPGYAKLRERAQVIGTWDDHDYGLNDAGK 141

Query: 522  EYSGKEFSQRLLLDFLDEAEDSSRRKQAGVYASYMFGPEGKRVKVIMLDTRYHREPLLSD 701
            E+ GK  SQRLLLDFLDEAEDSSRR+QAGVYASYMFGPEGKRVKVI+LDTRYHR+PL SD
Sbjct: 142  EFGGKVTSQRLLLDFLDEAEDSSRRQQAGVYASYMFGPEGKRVKVILLDTRYHRDPLSSD 201

Query: 702  GTILGDPQWQWLERELHGPPSEMTIIGSSIQVVSNLSATTGPLFYVESWAXXXXXXXXXX 881
            G +LGDPQWQWLERELHGP SE+TIIGSSIQV+SNLSATTGPLFYVESWA          
Sbjct: 202  GAVLGDPQWQWLERELHGPRSEITIIGSSIQVISNLSATTGPLFYVESWARFPRERERLF 261

Query: 882  XXIDSSKRNGVLFISGDVHFGEIARFDCGAQYPLYDITSSGLTQSVENSVPAVLQSVMRL 1061
              IDSSKRNGV FISGDVHFGEI+R+DCGAQYPLYDITSSGLTQSVENSVP+V Q +MRL
Sbjct: 262  RLIDSSKRNGVFFISGDVHFGEISRYDCGAQYPLYDITSSGLTQSVENSVPSVFQPLMRL 321

Query: 1062 LAWLTPTPMRVFSPNCRHKSCSYGQPNFGAIEIDWNAVPSWVKIELRDLQGNSVDGVEFP 1241
            +A LTPT +RVFSPNCR+KSC+YGQPNFGAIEIDWNAVP  +K+ELRD++GNSV GVEFP
Sbjct: 322  VALLTPTTLRVFSPNCRYKSCTYGQPNFGAIEIDWNAVPPQIKLELRDVEGNSVGGVEFP 381

Query: 1242 ISELKPSNAHANKKEGHSFEAHCSLETELSWLVRYRLALLFFGTIAXXXXXXXXXXIACC 1421
            ISEL PS AHA  K+GHS++ HC+LETEL WLV +RLALL FGTIA          I C 
Sbjct: 382  ISELDPSKAHAITKQGHSYQRHCALETELPWLVWHRLALLLFGTIAVLVIAVVLLGITCL 441

Query: 1422 SATKMFTRKCKM 1457
            SA  +FT+K KM
Sbjct: 442  SAANIFTKKSKM 453



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>Os03g0145000:Os03g0145000 |
          Length = 1324

 Score = 32.7 bits (73), Expect = 0.96
 Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 10/93 (10%)
 Frame = +2

Query: 227  PERAPARVGGDRGVRPAGLHLARGQ-------RLRGQQAPVPGVREGADGGALEERAAVL 385
            P+ A +R  G   +R +G     G+         RG  A   G     +GG  + R  V+
Sbjct: 1195 PDLARSRSAGVTPMRRSGAAGGEGRGEATLVREGRGGSAGGGGGGRAREGGGRDGRGEVV 1254

Query: 386  PGHRGGAAREVRAGQGQPGVRQAEGE---G*GH 475
             G   G   EV+ G+G+  V +  GE   G GH
Sbjct: 1255 VGEERGKMAEVKEGRGKVAVGEGRGEVAVGEGH 1287



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>Os05g0102700:Os05g0102700 |
          Length = 161

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 9/78 (11%)
 Frame = +2

Query: 251 GGDRGVRPAGLHLARGQRLRGQQAPVPGVREGAD---------GGALEERAAVLPGHRGG 403
           G D G   AG    RG+R RG+   V GV              GG L E   V  G  GG
Sbjct: 71  GADGGDELAGT--PRGERCRGRGRGVGGVPGAVGATPLGGVGKGGGLGEAGGVPRGGAGG 128

Query: 404 AAREVRAGQGQPGVRQAE 457
           A  E+  G+G      A+
Sbjct: 129 ATEEIDLGRGGDAADHAD 146



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>AK073848:Os01g0816100 |
          Length = 318

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 29/101 (28%), Positives = 40/101 (39%)
 Frame = +3

Query: 252 EAIVGFDPQVFIWLGDNVYGDNKRPFRVFGRERTVGPWRNVPRFYPATEEELRGKYELAK 431
           +A+ G     F    D  Y +  RP R  GR    G W+      P   +       + K
Sbjct: 69  KALFGRKEWYFFTPRDRKYPNGSRPNRAAGR----GYWKATGADKPVAPKGSARTVGIKK 124

Query: 432 ANPGYAKLRERARVIGTWDDHDYGLNDAGKEYSGKEFSQRL 554
           A   Y+    R  V   W  H+Y L DA +   GK+ SQ+L
Sbjct: 125 ALVFYSGKAPRG-VKTDWIMHEYRLADADRAPGGKKGSQKL 164



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>AB028183:Os01g0816100 |
          Length = 318

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 29/101 (28%), Positives = 40/101 (39%)
 Frame = +3

Query: 252 EAIVGFDPQVFIWLGDNVYGDNKRPFRVFGRERTVGPWRNVPRFYPATEEELRGKYELAK 431
           +A+ G     F    D  Y +  RP R  GR    G W+      P   +       + K
Sbjct: 69  KALFGRKEWYFFTPRDRKYPNGSRPNRAAGR----GYWKATGADKPVAPKGSARTVGIKK 124

Query: 432 ANPGYAKLRERARVIGTWDDHDYGLNDAGKEYSGKEFSQRL 554
           A   Y+    R  V   W  H+Y L DA +   GK+ SQ+L
Sbjct: 125 ALVFYSGKAPRG-VKTDWIMHEYRLADADRAPGGKKGSQKL 164



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>AK106351:Os10g0136200 |
          Length = 402

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 1550 DVDWPRINMTLDCEYSMMRAHTGQV 1624
            D +WP++N + DC Y +MR   G V
Sbjct: 270  DGNWPQMNFSSDCHYCIMRGEDGNV 294



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>AK069758:Os10g0136200 |
          Length = 395

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 1550 DVDWPRINMTLDCEYSMMRAHTGQV 1624
            D +WP++N + DC Y +MR   G V
Sbjct: 263  DGNWPQMNFSSDCHYCIMRGEDGNV 287



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>Os04g0429000:Os04g0429000 |
          Length = 290

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 24/60 (40%), Positives = 31/60 (51%)
 Frame = +2

Query: 275 AGLHLARGQRLRGQQAPVPGVREGADGGALEERAAVLPGHRGGAAREVRAGQGQPGVRQA 454
           AG   AR +R R ++A  P V+E A   A EE     P   GGA R +R  +  PGV +A
Sbjct: 18  AGSARARARRRR-RRANAPRVQEAAVPAAAEE-----PVRDGGARRPLRRPRQDPGVVEA 71



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>AK099104:Os01g0674500 |
          Length = 130

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 24/57 (42%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
 Frame = +2

Query: 320 APVPGVREGADGGALEERAAVLPGHRGGAA---REVRAGQGQPGVR-----QAEGEG 466
           A   G R GA GG    RA   PG   GAA    +VR G  + GVR     +AEG G
Sbjct: 28  AAAAGGRRGARGGGGGGRAGGGPGGEVGAAAAGADVRGGAARGGVRGRALARAEGRG 84



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>AK070401:Os01g0674500 |
          Length = 147

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 24/57 (42%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
 Frame = +2

Query: 320 APVPGVREGADGGALEERAAVLPGHRGGAA---REVRAGQGQPGVR-----QAEGEG 466
           A   G R GA GG    RA   PG   GAA    +VR G  + GVR     +AEG G
Sbjct: 45  AAAAGGRRGARGGGGGGRAGGGPGGEVGAAAAGADVRGGAARGGVRGRALARAEGRG 101



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>Os03g0732800:Os03g0732800 |
          Length = 324

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
 Frame = +2

Query: 245 RVGGDR---GVRPAGLHLARGQRLRGQQAPVPGVRE-----GADGGALEERAAVLPGHRG 400
           ++GG R   G RPA    AR      ++ P     E     GA+GGA+   AA   G   
Sbjct: 201 KIGGSRCGEGARPARSGGARRPGRPARRRPPAACEEAASRRGAEGGAVRGEAAAAAGGLA 260

Query: 401 GAAREVRAGQGQPGVRQAEG 460
              R  + G G+ G R+  G
Sbjct: 261 AGVRVAQRG-GRRGARRGGG 279



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>AK121769:Os12g0145900 |
          Length = 203

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 7/81 (8%)
 Frame = +2

Query: 239 PARVGGDRGVRPAGLHLARGQRLRGQQAPVPGVREGA---DGGALEERAAVLPGHRGG-- 403
           PA V G R  R       R + L G +    G   GA   DGG +   AA + GHRGG  
Sbjct: 89  PAAVAGRRRRRRRRRAEERQEVLDGGEPAGVGAIGGAGGVDGGGVRRGAAPVQGHRGGDG 148

Query: 404 --AAREVRAGQGQPGVRQAEG 460
             AAR         G     G
Sbjct: 149 GDAARRAGVRHAAAGAEAIHG 169



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>Os08g0176200:Os08g0176200 |
          Length = 1686

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 1721 LSVCFIYICIFVRTLVTNERQLGRTTIAED-LHGNLCWS 1834
            L  CF+Y+CIF      N+++L    IAE  +H    WS
Sbjct: 374  LRTCFLYLCIFPEDYKVNKQRLINRWIAEGFVHEKQGWS 412



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>AK110062: |
          Length = 998

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
 Frame = -3

Query: 514 ASFNP*SWSSHVPMTLALSLSLAYPGLALASSYFPRSSSSVAG*NRGTFLQGPTVRSLPN 335
           AS +P  WS  VP       +LA   L  A S+   + SS      G +   PT  SLP 
Sbjct: 256 ASASPAQWS-RVPERRG---TLANGELPSARSHRDSAQSSQVPPTPGAYFTPPTTASLPV 311

Query: 334 TR-NGRLLSP*T-LSPSQMKTCGSNPTI 257
            R N    SP T +SPS ++   S P +
Sbjct: 312 ARDNNDAPSPRTAISPSVLRNTSSTPNL 339



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>AK110045: |
          Length = 1017

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = -3

Query: 205 ILETTAVALVAARREGANRMRRKRWTSREPAIGASERA 92
           I  T A  L A  REGA    R+RW  RE      +RA
Sbjct: 502 ICTTNAQTLTALAREGAQIQDRRRWLRREAEQAERQRA 539



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>AK072036:Os02g0580900 |
          Length = 352

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 29/74 (39%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = +2

Query: 269 RPAG-LHLARGQRLRGQQAPVPGVREGADGGALEERAAVLPGHRGGAAREVRAGQGQPGV 445
           R AG L L  G+   GQ   VP VRE     A   +AA   G RGG AR  +      G 
Sbjct: 278 RQAGPLLLDAGRARGGQLRRVPRVRE-----APRVQAARRHGRRGGGARRCQ------GR 326

Query: 446 RQAEGEG*GHWNMG 487
           R+  GEG G    G
Sbjct: 327 RRRRGEGDGRLRRG 340



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>Os01g0916700:Os01g0916700 |
          Length = 140

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 11/51 (21%)
 Frame = -1

Query: 543 RTLFHYIPFLHHSIR------NHGH----PMFQ*P*PSPSAWR-TPGWPWP 424
           R   H  P  HH +       +HGH    P+   P P+P+A R TP  PWP
Sbjct: 13  RLHLHLDPRHHHHVHIRFCPHHHGHITPHPLAPAPAPAPAAHRTTPAAPWP 63



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>AK110966:Os05g0457000 |
          Length = 129

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 43  YPHLSSEPPPFLLSAPKLAHSHQ 111
           + H +S PPP  L APK AH H+
Sbjct: 2   WDHCTSAPPPASLYAPKTAHIHR 24


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 59,156,479
Number of extensions: 1431048
Number of successful extensions: 4179
Number of sequences better than 10.0: 18
Number of HSP's gapped: 4165
Number of HSP's successfully gapped: 18
Length of query: 660
Length of database: 15,399,855
Length adjustment: 107
Effective length of query: 553
Effective length of database: 11,115,468
Effective search space: 6146853804
Effective search space used: 6146853804
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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