>P42251:PPBD_BACSU Alkaline phosphatase D precursor - Bacillus subtilis|
          Length = 556
 Score = 42.4 bits (98), Expect = 0.007
 Identities = 50/220 (22%), Positives = 78/220 (35%), Gaps = 45/220 (20%)
 Frame = +3

Query: 480  TWDDHDYGLNDAGKEYSGKEFSQRLLLDFLDEAEDSSRRKQAGVYASYMF---------- 629
            TWDDH+   N A K     +  +  +L            ++A  Y +Y            
Sbjct: 263  TWDDHEVENNYANKIPEKGQSVEAFVL------------RRAAAYQAYYEHMPLRISSLP 310

Query: 630  -GPE---------GKRVKVIMLDTRYHREPLLS-DG-------------TILGDPQWQWL 737
             GP+         G      +LDTR +R+   + DG             T+LG  Q QWL
Sbjct: 311  NGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWL 370

Query: 738  ERELHGPPSEMTIIGSSIQVVS-NLSATTGPLFYVESWAXXXXXXXXXXXXIDSSKRNGV 914
               L    +   ++   I     N   +  P++ ++SW             I S   N V
Sbjct: 371  FNNLGSSTAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNV 430

Query: 915  LFISGDVH----------FGEIARFDCGAQYPLYDITSSG 1004
            + ++GDVH          F + +    GA++    ITS G
Sbjct: 431  VVLTGDVHASWASNLHVDFEKTSSKIFGAEFVGTSITSGG 470

>P78316:NOP14_HUMAN Nucleolar protein 14 - Homo sapiens (Human)|
          Length = 857

 Score = 37.0 bits (84), Expect = 0.30
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
 Frame = +3

Query: 408 RGKYELAKANPGYAKL-RERARVIGTWDDHDYGLNDAGKEYSGKEFSQRLLLDFLD-EAE 581
           RG    A +NP   K+ R++ +++G    HD GL    +  + ++ +Q LL ++ + +  
Sbjct: 21  RGGPAKANSNPFEVKVNRQKFQILGRKTRHDVGLPGVSRARALRKRTQTLLKEYKERDKS 80

Query: 582 DSSRRKQAGVYASYMFGPEGKRVKVIMLDTRYHRE 686
           +  R K+ G Y S M  PE K +K   L+ + H E
Sbjct: 81  NVFRDKRFGEYNSNM-SPEEKMMKRFALEQQRHHE 114

>Q9CQ18:RNH2C_MOUSE Ribonuclease H2 subunit C - Mus musculus (Mouse)|
          Length = 166

 Score = 35.4 bits (80), Expect = 0.88
 Identities = 31/91 (34%), Positives = 35/91 (38%), Gaps = 13/91 (14%)
 Frame = +2

Query: 230 ERAPARVGGDRGVRPAGLHLARGQRLRGQQAPV-----PGVREGADG--------GALEE 370
           +R   R G  RG  PA LHL     L  + APV     P VR  ADG        G   E
Sbjct: 12  QRIHLRPGSLRGAAPAKLHLLPCDVLVSRPAPVDRFFTPAVRHDADGLQASFRGRGLRGE 71

Query: 371 RAAVLPGHRGGAAREVRAGQGQPGVRQAEGE 463
             AV PG  G        G+G  G     G+
Sbjct: 72  EVAVPPGFAGFVMVTEEKGEGLIGKLNFSGD 102

>Q12068:GRE2_YEAST NADPH-dependent methylglyoxal reductase GRE2 - Saccharomyces|
           cerevisiae (Baker's yeast)
          Length = 342

 Score = 34.7 bits (78), Expect = 1.5
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +3

Query: 417 YELAKANPGYAKLRERARVIGTWDDHDYGLNDAGKEYSG-KEFSQRLLLDFLDEAEDSSR 593
           +++AK N       E +    TW+      +D    Y G K+F+++   +FL+E  DS +
Sbjct: 132 FDMAKENDKSLTFNEESWNPATWESCQ---SDPVNAYCGSKKFAEKAAWEFLEENRDSVK 188

Query: 594 RKQAGVYASYMFGPE 638
            +   V   Y+FGP+
Sbjct: 189 FELTAVNPVYVFGPQ 203

>P19837:SPD1_NEPCL Spidroin-1 - Nephila clavipes (Golden silk orbweaver)|
          Length = 747

 Score = 33.1 bits (74), Expect = 4.4
 Identities = 23/64 (35%), Positives = 27/64 (42%)
 Frame = +2

Query: 296 GQRLRGQQAPVPGVREGADGGALEERAAVLPGHRGGAAREVRAGQGQPGVRQAEGEG*GH 475
           GQ      A   GVR+G  GG L  + A   G   GAA     G GQ G     G+G G 
Sbjct: 557 GQGAGAAAAAAGGVRQGGYGG-LGSQGAGRGGQGAGAAAAAAGGAGQGGYGGLGGQGVGR 615

Query: 476 WNMG 487
             +G
Sbjct: 616 GGLG 619

>P08681:COX1_CHLRE Cytochrome c oxidase subunit 1 - Chlamydomonas reinhardtii|
          Length = 505

 Score = 33.1 bits (74), Expect = 4.4
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
 Frame = +1

Query: 1600 DASTYWTSVTKL**VSV*HGGEMMSWKS------LWLTMNEWVQYGFICLF 1734
            D   Y+TS T +  ++V  G ++ SW +      +W T   W   GFICLF
Sbjct: 294  DTVAYFTSATMI--IAVPTGMKIFSWMATIYSGRVWFTTPMWFAVGFICLF 342

>Q7SAF6:CEF1_NEUCR Pre-mRNA-splicing factor cef-1 - Neurospora crassa|
          Length = 779

 Score = 32.7 bits (73), Expect = 5.7
 Identities = 23/76 (30%), Positives = 37/76 (48%)
 Frame = +3

Query: 372 VPRFYPATEEELRGKYELAKANPGYAKLRERARVIGTWDDHDYGLNDAGKEYSGKEFSQR 551
           VP FY  TEE  R +Y+ A  +P   ++  + +  G  D+ D       K+ S +   + 
Sbjct: 232 VPGFYDTTEEMSRNEYQRAHFDPKKQQVGNKRK--GEEDERDGKRRKGDKDPSVQAALKA 289

Query: 552 LLLDFLDEAEDSSRRK 599
             L  + EAE SS+R+
Sbjct: 290 GQLQKMREAEQSSKRR 305

>Q9JM00:VAX1_RAT Ventral anterior homeobox 1 - Rattus norvegicus (Rat)|
          Length = 336

 Score = 32.3 bits (72), Expect = 7.5
 Identities = 19/51 (37%), Positives = 21/51 (41%)
 Frame = +2

Query: 290 ARGQRLRGQQAPVPGVREGADGGALEERAAVLPGHRGGAAREVRAGQGQPG 442
           A G  LRG   P  G    A   A    AA  PG  G A++   A  G PG
Sbjct: 204 ALGSALRGPSLPALGAGAAAGSAAAAAAAATAPGPAGAASQHPPAVGGAPG 254

>Q2NUP0:SYQ_SODGM Glutaminyl-tRNA synthetase - Sodalis glossinidius (strain morsitans)|
          Length = 556

 Score = 32.3 bits (72), Expect = 7.5
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 1457 GIATHDRGQGKGVFDQTSVVKTELD-TDQVSRDVDWPRINMTLDCEYS 1597
            GIA   +GQ    FD T+ VK +++  D +  DV W   N + D  YS
Sbjct: 53   GIAQDYQGQCNLRFDDTNPVKEDMEYVDSIKHDVQWLGFNWSGDIHYS 100

>Q52QH4:NAC68_ORYSJ NAC domain-containing protein 68 - Oryza sativa subsp. japonica|
           (Rice)
          Length = 318

 Score = 32.0 bits (71), Expect = 9.7
 Identities = 29/101 (28%), Positives = 40/101 (39%)
 Frame = +3

Query: 252 EAIVGFDPQVFIWLGDNVYGDNKRPFRVFGRERTVGPWRNVPRFYPATEEELRGKYELAK 431
           +A+ G     F    D  Y +  RP R  GR    G W+      P   +       + K
Sbjct: 69  KALFGRKEWYFFTPRDRKYPNGSRPNRAAGR----GYWKATGADKPVAPKGSARTVGIKK 124

Query: 432 ANPGYAKLRERARVIGTWDDHDYGLNDAGKEYSGKEFSQRL 554
           A   Y+    R  V   W  H+Y L DA +   GK+ SQ+L
Sbjct: 125 ALVFYSGKAPRG-VKTDWIMHEYRLADADRAPGGKKGSQKL 164

>P08488:GLT3_WHEAT Glutenin, high molecular weight subunit 12 precursor - Triticum|
           aestivum (Wheat)
          Length = 660

 Score = 32.0 bits (71), Expect = 9.7
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
 Frame = +2

Query: 227 PERAPARVGGDRGVRPAGLHL-ARGQRL-RGQQAPVPGVREGADGGALEERAAVLPGHRG 400
           PE+      G +G  P  L    +GQ+  +GQQ   P         +L++      GH  
Sbjct: 414 PEQEQQPGQGQQGYYPTSLQQPGQGQQQGQGQQGYYPT--------SLQQPGQGQQGHYP 465

Query: 401 GAAREVRAGQGQPGVRQAEGEG 466
            + ++   GQGQPG RQ  G+G
Sbjct: 466 ASLQQPGQGQGQPGQRQQPGQG 487

>P25940:CO5A3_HUMAN Collagen alpha-3(V) chain precursor - Homo sapiens (Human)|
          Length = 1745

 Score = 32.0 bits (71), Expect = 9.7
 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 12/86 (13%)
 Frame = +2

Query: 239  PARVGGDRGVRPAGLHLARGQR----------LRGQQAPV-PGVREGADGGALEERAAVL 385
            P + G +  V PAG   +RG+R          + G   P+ P    G  G   ++     
Sbjct: 1024 PGQSGSEGPVGPAGKKGSRGERGPPGPTGKDGIPGPLGPLGPPGAAGPSGEEGDKGDVGA 1083

Query: 386  PGHRGGAAREVRAG-QGQPGVRQAEG 460
            PGH+G    +  AG  GQPG+R   G
Sbjct: 1084 PGHKGSKGDKGDAGPPGQPGIRGPAG 1109

>Q8N726:CD2A2_HUMAN Cyclin-dependent kinase inhibitor 2A, isoform 4 - Homo sapiens|
           (Human)
          Length = 173

 Score = 32.0 bits (71), Expect = 9.7
 Identities = 27/71 (38%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
 Frame = +2

Query: 239 PARVGGDRGVRPAGLHLA---RGQRLRGQQAPVPGVREGADGGALEERAAVLPGHRGGAA 409
           P R G D G RP+G   A   RG +LR  +   P       GG        LPGH GGAA
Sbjct: 102 PRRPGHDDGQRPSGGAAAAPRRGAQLRRPRHSHPTRARRCPGG--------LPGHAGGAA 153

Query: 410 REVRAGQGQPG 442
                G+G  G
Sbjct: 154 ----PGRGAAG 160


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 357,879,830
Number of extensions: 8234870
Number of successful extensions: 22392
Number of sequences better than 10.0: 13
Number of HSP's gapped: 22364
Number of HSP's successfully gapped: 13
Length of query: 660
Length of database: 100,686,439
Length adjustment: 120
Effective length of query: 540
Effective length of database: 67,771,039
Effective search space: 36596361060
Effective search space used: 36596361060
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)