ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf43d21 |
|---|---|
| Clone Library Name | barley_pub |
>Q7Y1X1:EST_HEVBR Esterase precursor - Hevea brasiliensis (Para rubber tree)| Length = 391 Score = 174 bits (441), Expect = 8e-43 Identities = 129/364 (35%), Positives = 178/364 (48%), Gaps = 19/364 (5%) Frame = +2 Query: 71 FHSIFSFGSSYSDTGNFVLLSAGFPFSPFNNSPYGETFFRRPTGRPSDGRLIIDFIAEAL 250 F +IF+FG S SDTG +A +P +P PYGETFF R TGR SDGRLIIDFIAE+ Sbjct: 32 FPAIFNFGDSNSDTGGKA--AAFYPLNP----PYGETFFHRSTGRYSDGRLIIDFIAESF 85 Query: 251 ELPLVPPFLSKSKAQNFTQGANFAIVGGT-ALDVGFFLRHNSGSVPPFRSSLRAQIAWFR 427 LP + P+LS S NF GA+FA G T L H G PF L Q + FR Sbjct: 86 NLPYLSPYLS-SLGSNFKHGADFATAGSTIKLPTTIIPAH--GGFSPF--YLDVQYSQFR 140 Query: 428 KVAKQSLGCNTTAQCRERL---------ARSLFVVGELGLTDYSYILSGGKSLQEAKSFV 580 + +S T L A F +G+ LT+ L +++E + V Sbjct: 141 QFIPRSQFIRETGGIFAELVPEEYYFEKALYTFDIGQNDLTEGFLNL----TVEEVNATV 196 Query: 581 PDVVQAIIRGVERLVEEGARYVVVSGTPLMGCTPMALTKYAVAANATEYDRRTGCLRRLN 760 PD+V + V+++ + GAR + T +GC LT + A + GC + N Sbjct: 197 PDLVNSFSANVKKIYDLGARTFWIHNTGPIGCLSFILTYFPWAEKDS-----AGCAKAYN 251 Query: 761 GLSQYHNWMLQESVRRMRVKYPGTTLVYADYHKPVARLIRRPGKLGFTAEPLRACCGGGG 940 ++Q+ N L+E V ++R P T V+ D + L P K GF PL CCG GG Sbjct: 252 EVAQHFNHKLKEIVAQLRKDLPLATFVHVDIYSVKYSLFSEPEKHGFEF-PLITCCGYGG 310 Query: 941 RYNYNTDGSACGLPGAT---------TCSDPSTHLFWDGIHYTEAANKYIAHGWLTGLYA 1093 +YN++ + CG +C+ PS + WDG HYTEAAN+Y TG ++ Sbjct: 311 KYNFSVT-APCGDTVTADDGTKIVVGSCACPSVRVNWDGAHYTEAANEYFFDQISTGAFS 369 Query: 1094 HPAI 1105 P + Sbjct: 370 DPPV 373
>Q9FXE5:FUCO3_ARATH Alpha-L-fucosidase 3 precursor - Arabidopsis thaliana (Mouse-ear| cress) Length = 372 Score = 162 bits (409), Expect = 4e-39 Identities = 114/356 (32%), Positives = 173/356 (48%), Gaps = 16/356 (4%) Frame = +2 Query: 44 PEAELHAPRFHSIFSFGSSYSDTGNFVLLSAGFPFSPFNNSPYGETFFRRPTGRPSDGRL 223 P H F +IF+FG S SDTG LSA F + P+G +FF P GR DGRL Sbjct: 19 PSTHAHQCHFPAIFNFGDSNSDTGG---LSAAFGQA---GPPHGSSFFGSPAGRYCDGRL 72 Query: 224 IIDFIAEALELPLVPPFLSKSKAQNFTQGANFAIVGGTALDVGFFLRHNSGSVPPFRSSL 403 +IDFIAE+L LP + FL S NF+ GANFA G + LR + S PF SL Sbjct: 73 VIDFIAESLGLPYLSAFLD-SVGSNFSHGANFATAGSPIRALNSTLRQSGFS--PF--SL 127 Query: 404 RAQIAWF-----RKVAKQSLG--CNTTAQCRERLARSLFVVGELGLTDYSYILSGGKSLQ 562 Q F R +S G T + +++L+ ++G D + K+++ Sbjct: 128 DVQFVQFYNFHNRSQTVRSRGGVYKTMLPESDSFSKALYTF-DIGQNDLTAGYFANKTVE 186 Query: 563 EAKSFVPDVVQAIIRGVERLVEEGARYVVVSGTPLMGCTPMALTKYAVAANATEYDRRTG 742 + ++ VP+++ + ++ + +G RY + T +GC + ++ A+++D G Sbjct: 187 QVETEVPEIISQFMNAIKNIYGQGGRYFWIHNTGPIGCLAYVIERF--PNKASDFDSH-G 243 Query: 743 CLRRLNGLSQYHNWMLQESVRRMRVKYPGTTLVYADYHKPVARLIRRPGKLGFTAEPLRA 922 C+ LN L+Q N L+++V +R + Y D + L GF L + Sbjct: 244 CVSPLNHLAQQFNHALKQAVIELRSSLSEAAITYVDVYSLKHELFVHAQGHGFKGS-LVS 302 Query: 923 CCGGGGRYNYNTDGSACGLPG---------ATTCSDPSTHLFWDGIHYTEAANKYI 1063 CCG GG+YNYN G CG+ C +P + WDG+H+T+AANK+I Sbjct: 303 CCGHGGKYNYN-KGIGCGMKKIVKGKEVYIGKPCDEPDKAVVWDGVHFTQAANKFI 357
>P40602:APG_ARATH Anter-specific proline-rich protein APG precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 534 Score = 90.5 bits (223), Expect = 2e-17 Identities = 90/337 (26%), Positives = 149/337 (44%), Gaps = 8/337 (2%) Frame = +2 Query: 77 SIFSFGSSYSDTGNFVLLSAGFPFSPFNNSPYGETF-FRRPTGRPSDGRLIIDFIAEALE 253 ++F FG S DTGN L N PYG F FR TGR S+G + D++A+ + Sbjct: 204 AVFFFGDSVFDTGNNNNLETKIKS---NYRPYGMDFKFRVATGRFSNGMVASDYLAKYMG 260 Query: 254 LP-LVPPFLS-KSKAQNFTQGANFAIVGGTALDVGFFLRHNSGSVPPFRSSLRAQIAWFR 427 + +VP +L K + + G +FA GG + N+ + + + I Sbjct: 261 VKEIVPAYLDPKIQPNDLLTGVSFAS-GGAGYNPTTSEAANAIPMLDQLTYFQDYIEKVN 319 Query: 428 KVAKQSLGCNTTA---QCRERLARSL-FVVGELGLTDYSYILSGGKSLQ-EAKSFVPDVV 592 ++ +Q A + + +++ + VVG +Y SG + L+ + S+ + Sbjct: 320 RLVRQEKSQYKLAGLEKTNQLISKGVAIVVGGSNDLIITYFGSGAQRLKNDIDSYTTIIA 379 Query: 593 QAIIRGVERLVEEGARYVVVSGTPLMGCTPMALTKYAVAANATEYDRRTGCLRRLNGLSQ 772 + V +L GAR + V GTP +GC P K ++ C LN SQ Sbjct: 380 DSAASFVLQLYGYGARRIGVIGTPPLGCVPSQRLK-----------KKKICNEELNYASQ 428 Query: 773 YHNWMLQESVRRMRVKYPGTTLVYADYHKPVARLIRRPGKLGFTAEPLRACCGGGGRYNY 952 N L + ++ P +T VY D + +++++ P GF E + CC G Sbjct: 429 LFNSKLLLILGQLSKTLPNSTFVYMDIYTIISQMLETPAAYGFE-ETKKPCCKTG----L 483 Query: 953 NTDGSACGLPGATTCSDPSTHLFWDGIHYTEAANKYI 1063 + G+ C + C + S++LFWDG+H T+ A K I Sbjct: 484 LSAGALCKKSTSKICPNTSSYLFWDGVHPTQRAYKTI 520
>P40603:APG_BRANA Anther-specific proline-rich protein APG - Brassica napus (Rape)| Length = 449 Score = 89.7 bits (221), Expect = 3e-17 Identities = 95/351 (27%), Positives = 155/351 (44%), Gaps = 11/351 (3%) Frame = +2 Query: 77 SIFSFGSSYSDTGNFVLLSAGFPFSPFNNSPYGETF-FRRPTGRPSDGRLIIDFIAEALE 253 ++F FG S DTGN L N PYG F TGR S+GR+ D+I++ L Sbjct: 125 AVFFFGDSIFDTGNNNNLDTKLKC---NYRPYGMDFPMGVATGRFSNGRVASDYISKYLG 181 Query: 254 LP-LVPPFLSKSKAQNFTQGANFAIVGGTALDVGFFLRHNSGSVPPFRSSLRA-----QI 415 + +VP ++ K QN + + G + F +G +P S + Q+ Sbjct: 182 VKEIVPAYVDKKLQQNNELQQSDLLTGVS------FASGGAGYLPQTSESWKVTTMLDQL 235 Query: 416 AWF---RKVAKQSLGCNTTAQCRERLARSLFVVGELGLTDYSYILSGGKSLQ-EAKSFVP 583 +F +K K+ +G T + + A ++ V G L Y+Y +G + L+ + SF Sbjct: 236 TYFQDYKKRMKKLVGKKKTKKIVSKGA-AIVVAGSNDLI-YTYFGNGAQHLKNDVDSFTT 293 Query: 584 DVVQAIIRGVERLVEEGARYVVVSGTPLMGCTPMALTKYAVAANATEYDRRTGCLRRLNG 763 + + V +L GAR + V GTP +GCTP K ++ C LN Sbjct: 294 MMADSAASFVLQLYGYGARRIGVIGTPPIGCTPSQRVK-----------KKKICNEDLNY 342 Query: 764 LSQYHNWMLQESVRRMRVKYPGTTLVYADYHKPVARLIRRPGKLGFTAEPLRACCGGGGR 943 +Q N L + ++ P +T+VY D + ++++ P GF E + CC + Sbjct: 343 AAQLFNSKLVIILGQLSKTLPNSTIVYGDIYSIFSKMLESPEDYGF-EEIKKPCC----K 397 Query: 944 YNYNTDGSACGLPGATTCSDPSTHLFWDGIHYTEAANKYIAHGWLTGLYAH 1096 G C S+ S++LFWDG+H ++ A + I++ L Y H Sbjct: 398 IGLTKGGVFCKERTLKNMSNASSYLFWDGLHPSQRAYE-ISNRKLVKKYIH 447
>Q6B6R8:ESTA_PSEPU Esterase estA precursor - Pseudomonas putida| Length = 646 Score = 39.3 bits (90), Expect = 0.042 Identities = 87/379 (22%), Positives = 133/379 (35%), Gaps = 25/379 (6%) Frame = +2 Query: 71 FHSIFSFGSSYSDTGNFVLLSAGFPFSPFNNSPYGET--FFRR--PTGRPSDGRLIIDFI 238 + ++ FG S SD G F P P G T F R PT + G + Sbjct: 29 YSTLVVFGDSLSDAGQF----------PDPAGPAGSTSRFTNRVGPTYQNGSGEIFGPTA 78 Query: 239 AEAL--ELPLVPPFLSKSKA-----QNFTQGANFAIVGGTALDVGF--FLRHNSGSVPPF 391 L +L + P L+ S + Q G N+A VGG D + N + Sbjct: 79 PMLLGNQLGIAPGDLAASTSPVNAQQGIADGNNWA-VGGYRTDQIYDSITAANGSLIERD 137 Query: 392 RSSLRAQIAWFRKVAKQSLGCNTTAQCRERLARSLFVVGELGLTDYSYILSGGKSLQEAK 571 + LR++ + A+Q LG + A YI GG + + Sbjct: 138 NTLLRSRDGYLVDRARQGLGADPNA--------------------LYYITGGGNDFLQGR 177 Query: 572 SFVPDVVQA------IIRGVERLVEEGARYVVVSGTPLMGCTPMA----LTKYAVAANAT 721 + + VQA ++ V+ L + GARY+VV P +G TP L +A + T Sbjct: 178 --ILNDVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATFGGPLQPFASQLSGT 235 Query: 722 EYDRRTGCLRRLNGLSQYHNWMLQESVRRMRVKYPGTTLVYADYHKPVARLIRRPGKLGF 901 T ++ G ++ + + + P G Sbjct: 236 FNAELTA-----------------------QLSQAGANVIPLNIPLLLKEGMANPASFGL 272 Query: 902 TAEP--LRACCGGGGRYNYNTDGSACGLPGATTCSDPSTHLFWDGIHYTEAANKYIAHGW 1075 A+ + C G G T G+ G+T DPS LF D +H T + IA Sbjct: 273 AADQNLIGTCFSGNG----CTMNPTYGINGST--PDPSKLLFNDSVHPTITGQRLIADYT 326 Query: 1076 LTGLYAHPAILSLPQ*IHG 1132 + L A + LP+ HG Sbjct: 327 YSLLSAPWELTLLPEMAHG 345
>O33407:ESTA_PSEAE Esterase estA precursor - Pseudomonas aeruginosa| Length = 646 Score = 39.3 bits (90), Expect = 0.042 Identities = 87/379 (22%), Positives = 133/379 (35%), Gaps = 25/379 (6%) Frame = +2 Query: 71 FHSIFSFGSSYSDTGNFVLLSAGFPFSPFNNSPYGET--FFRR--PTGRPSDGRLIIDFI 238 + ++ FG S SD G F P P G T F R PT + G + Sbjct: 29 YSTLVVFGDSLSDAGQF----------PDPAGPAGSTSRFTNRVGPTYQNGSGEIFGPTA 78 Query: 239 AEAL--ELPLVPPFLSKSKA-----QNFTQGANFAIVGGTALDVGF--FLRHNSGSVPPF 391 L +L + P L+ S + Q G N+A VGG D + N + Sbjct: 79 PMLLGNQLGIAPGDLAASTSPVNAQQGIADGNNWA-VGGYRTDQIYDSITAANGSLIERD 137 Query: 392 RSSLRAQIAWFRKVAKQSLGCNTTAQCRERLARSLFVVGELGLTDYSYILSGGKSLQEAK 571 + LR++ + A+Q LG + A YI GG + + Sbjct: 138 NTLLRSRDGYLVDRARQGLGADPNA--------------------LYYITGGGNDFLQGR 177 Query: 572 SFVPDVVQA------IIRGVERLVEEGARYVVVSGTPLMGCTPMA----LTKYAVAANAT 721 + + VQA ++ V+ L + GARY+VV P +G TP L +A + T Sbjct: 178 --ILNDVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATFGGPLQPFASQLSGT 235 Query: 722 EYDRRTGCLRRLNGLSQYHNWMLQESVRRMRVKYPGTTLVYADYHKPVARLIRRPGKLGF 901 T ++ G ++ + + + P G Sbjct: 236 FNAELTA-----------------------QLSQAGANVIPLNIPLLLKEGMANPASFGL 272 Query: 902 TAEP--LRACCGGGGRYNYNTDGSACGLPGATTCSDPSTHLFWDGIHYTEAANKYIAHGW 1075 A+ + C G G T G+ G+T DPS LF D +H T + IA Sbjct: 273 AADQNLIGTCFSGNG----CTMNPTYGINGST--PDPSKLLFNDSVHPTITGQRLIADYT 326 Query: 1076 LTGLYAHPAILSLPQ*IHG 1132 + L A + LP+ HG Sbjct: 327 YSLLSAPWELTLLPEMAHG 345
>P58295:SC6A5_RAT Sodium- and chloride-dependent glycine transporter 2 - Rattus| norvegicus (Rat) Length = 799 Score = 33.9 bits (76), Expect = 1.8 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 7/65 (10%) Frame = +1 Query: 733 PDGMPAAAQRPLAVPQLDAAGER-----EAHACEVPRDDAGVCRL--PQARGAAHPAPGK 891 P PAAA +P VP+ + G + +A ACE R G C+L PQA+ + Sbjct: 40 PAAAPAAAVQPPRVPRSASTGAQTFQSADARACEAQRPGVGFCKLSSPQAQATSAALRDL 99 Query: 892 ARVHS 906 + HS Sbjct: 100 SEGHS 104
>Q8NFD5:ARI1B_HUMAN AT-rich interactive domain-containing protein 1B - Homo sapiens| (Human) Length = 2236 Score = 33.9 bits (76), Expect = 1.8 Identities = 31/108 (28%), Positives = 42/108 (38%) Frame = +1 Query: 670 GVHANGADEIRGGGERDGVRPPDGMPAAAQRPLAVPQLDAAGEREAHACEVPRDDAGVCR 849 G A G E G G +PP +P P AVP+ + A A P AG C Sbjct: 193 GEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPC- 251 Query: 850 LPQARGAAHPAPGKARVHSGAPESVLRRGWAVQLQHGWISVRLTRCNH 993 Q G +PG +HS + + G LQ+ ++CNH Sbjct: 252 FDQHGG--QQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNH 297
>Q741Q1:RUVA_MYCPA Holliday junction ATP-dependent DNA helicase ruvA - Mycobacterium| paratuberculosis Length = 199 Score = 33.1 bits (74), Expect = 3.0 Identities = 20/50 (40%), Positives = 29/50 (58%) Frame = -3 Query: 340 RRAADDGEVGSLGEVLRLGLGQEGRHQRELQRLRDEVDDEAAVGRPAGGA 191 R+A DG+V +L V G+G+ G + L+ LRD++ A G PAG A Sbjct: 98 RQALHDGDVAALTRVP--GIGKRGAERMVLE-LRDKIGAAGAAGAPAGAA 144
>Q99289:HLT_VIBPA Thermolabile hemolysin precursor - Vibrio parahaemolyticus| Length = 418 Score = 33.1 bits (74), Expect = 3.0 Identities = 78/348 (22%), Positives = 128/348 (36%), Gaps = 4/348 (1%) Frame = +2 Query: 47 EAELHAPRFHSIFSFGSSYSDTGNFVLLSAGFPFSPFNNSPYGETFFRRPTGRPSDGRLI 226 +A + + + + + G S SDTGN + +A P NS + G S+G + Sbjct: 136 DAAMQPDQINKVVALGDSLSDTGN--IFNASQWRFPNPNSWF--------LGHFSNGFVW 185 Query: 227 IDFIAEALELPLVPPFLSKSKAQNFTQGANFAIVGGTALDVGFFLRHNSGSVPPFRSSLR 406 ++IA+A LPL + + +N + + G V +L Sbjct: 186 TEYIAKAKNLPLYNWAVGGAAGEN-----QYIALTGVGEQVSSYLT-------------- 226 Query: 407 AQIAWFRKVAKQSLGCNTTAQCRERLARSLFVVGELGLTDYSYILSGGKSLQEAKSFVPD 586 + K+AK NT LF + E GL D+ ++ + + E K+ D Sbjct: 227 -----YAKLAKNYKPANT-----------LFTL-EFGLNDF---MNYNRGVPEVKA---D 263 Query: 587 VVQAIIRGVERLVEEGARYVVVSGTPLMGCTPMALTKYAVAANATEYDRRTGCLRRLNGL 766 +A+I RL + GA+ ++ P T KY + E D+ + +N Sbjct: 264 YAEALI----RLTDAGAKNFMLMTLP--DATKAPQFKY---STQEEIDKIRAKVLEMNEF 314 Query: 767 SQYHNWMLQESVRRMRVKYPGTTLVYADYHKPVARLIRRPGKLGF--TAEP-LRACCGGG 937 + + M K G + D H L P + GF ++P L Sbjct: 315 IK---------AQAMYYKAQGYNITLFDTHALFETLTSAPEEHGFVNASDPCLDINRSSS 365 Query: 938 GRYNY-NTDGSACGLPGATTCSDPSTHLFWDGIHYTEAANKYIAHGWL 1078 Y Y + S C GA +FWD H T A ++Y+A L Sbjct: 366 VDYMYTHALRSECAASGA------EKFVFWDVTHPTTATHRYVAEKML 407
>Q9Y6A5:TACC3_HUMAN Transforming acidic coiled-coil-containing protein 3 - Homo sapiens| (Human) Length = 838 Score = 33.1 bits (74), Expect = 3.0 Identities = 41/159 (25%), Positives = 58/159 (36%) Frame = +1 Query: 400 PARADSVVPEGGEAVARLQHHRAMQGAPREISVRGGRAGPDRLQLHPLRREEPAGGQVLR 579 PA + VP G H A + + GRA + L P +EE A GQ+ Sbjct: 276 PAGVGTPVPADGTQTLTCAHTSAPESTAPTNHLVAGRA----MTLSP--QEEVAAGQMAS 329 Query: 580 AGRCASHHQXXXXXXXXXXXXXXXXXDAADGVHANGADEIRGGGERDGVRPPDGMPAAAQ 759 + R D +DG + A R GER G++PP + AA Sbjct: 330 SSRSGP---------------VKLEFDVSDGATSKRAPPPRRLGERSGLKPP--LRKAAV 372 Query: 760 RPLAVPQLDAAGEREAHACEVPRDDAGVCRLPQARGAAH 876 R PQ + + A E P +P +RG+ H Sbjct: 373 RQQKAPQEVEEDDGRSGAGEDP-------PMPASRGSYH 404
>Q9Y345:SC6A5_HUMAN Sodium- and chloride-dependent glycine transporter 2 - Homo sapiens| (Human) Length = 797 Score = 32.0 bits (71), Expect = 6.7 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 11/79 (13%) Frame = +1 Query: 679 ANGADEIRGGGERDGVRPPDGMP------AAAQRPLAVPQLDAAGER-----EAHACEVP 825 AN + G DG P P AAA P VP+ + G + +A ACE Sbjct: 14 ANSPEAAAAQGHPDGPCAPRTSPEQELPAAAAPPPPRVPRSASTGAQTFQSADARACEAE 73 Query: 826 RDDAGVCRLPQARGAAHPA 882 R G C+L R A A Sbjct: 74 RPGVGSCKLSSPRAQAASA 92
>Q86UL8:MAGI2_HUMAN Membrane-associated guanylate kinase, WW and PDZ domain-containing| protein 2 - Homo sapiens (Human) Length = 1455 Score = 32.0 bits (71), Expect = 6.7 Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = +1 Query: 727 RPPDGMPAAAQRPLAVPQLDAAGEREAHACEVPRDDAG--VCRLPQARGAAHPAPGKARV 900 RP G PA+ R + DAA A E PR AG +CR + GAA G Sbjct: 1337 RPEAGRPASEARAPGLAAADAADAARAGGKEAPRAAAGSELCR-REGPGAAPAFAGPGGG 1395 Query: 901 HSGAPESVLRRG 936 SGA E+ R G Sbjct: 1396 GSGALEAEGRAG 1407
>Q4UMJ9:BCRH_RICFE Uncharacterized transporter RF_0358 - Rickettsia felis (Rickettsia| azadi) Length = 405 Score = 31.6 bits (70), Expect = 8.7 Identities = 16/60 (26%), Positives = 29/60 (48%) Frame = +3 Query: 1263 GAAGISYGFHSTIIVVQVFFSMMPLSKESLSVHVWICFTLTCV*LSQFYSIFYVSSKKKK 1442 G AG +G +++ V + + + E++S +CF L+ FY I+ + KK K Sbjct: 345 GTAGSIFGAIYYVVIAAVTYLVSKIHSETISNFALLCFVLSISSAISFYCIWVLYKKKHK 404
>P50220:TITF1_MOUSE Thyroid transcription factor 1 - Mus musculus (Mouse)| Length = 372 Score = 31.6 bits (70), Expect = 8.7 Identities = 38/134 (28%), Positives = 46/134 (34%), Gaps = 2/134 (1%) Frame = +1 Query: 703 GGGERDGVRPPDGMPAAAQRP--LAVPQLDAAGEREAHACEVPRDDAGVCRLPQARGAAH 876 GGG G P A Q P +AVP L G+ P GA Sbjct: 236 GGGGGGGAGCPQQQQAQQQSPRRVAVPVLVKDGK------------------PCQAGA-- 275 Query: 877 PAPGKARVHSGAPESVLRRGWAVQLQHGWISVRLTRCNHLQRPIHPPLLGRHPLHRGCQQ 1056 PAPG A + S A + ++ A Q ISV LG HP H+ Sbjct: 276 PAPGAASLQSHAQQQAQQQAQAAQAAAAAISVGSGGAG----------LGAHPGHQPGSA 325 Query: 1057 VHRPRLAHRTLRPS 1098 P LAH P+ Sbjct: 326 GQSPDLAHHAASPA 339
>O15399:NMDE4_HUMAN Glutamate [NMDA] receptor subunit epsilon-4 precursor - Homo sapiens| (Human) Length = 1336 Score = 31.6 bits (70), Expect = 8.7 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = +1 Query: 730 PPDGMPAAAQRPLAVPQLDAAGEREAHACEVPRDDAGVCRLPQARGAAHP 879 PP P +PL P A G A VPR+ A V R + +GA P Sbjct: 903 PPPAKPPPPPQPLPSPAYPAPGPAPGPAPFVPRERASVDRWRRTKGAGPP 952 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 221,419,511 Number of extensions: 4948783 Number of successful extensions: 16182 Number of sequences better than 10.0: 16 Number of HSP's gapped: 16151 Number of HSP's successfully gapped: 17 Length of query: 483 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 366 Effective length of database: 68,593,924 Effective search space: 25105376184 Effective search space used: 25105376184 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
