ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf43d17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os08g0176000:Os08g0176000 31 0.82
2AK110052: 30 1.1

>Os08g0176000:Os08g0176000 |
          Length = 1504
 Score = 30.8 bits (68), Expect = 0.82
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -2

Query: 378  PGPFCLEPATSSSSCRGMSGLQRQHNSQLEPYRHYPK 268
            PGP    PA S+S+C    GL R     L P  H P+
Sbjct: 922  PGPPSAGPAPSASTCPAPPGLPRLDGPHLPPAPHVPR 958



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>AK110052: |
          Length = 913

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 24/62 (38%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = -3

Query: 317 SKDNTTVNWNLTDITRNNPVGHGILHTYSEALVA-RIHDVLINNVARRRSTGSGYLGHSD 141
           S DNT   WNL   T N P G     T S+ LV  R H   +  VA  RS    Y G  D
Sbjct: 558 SDDNTIKFWNLDAQTLNQPAGKS--GTDSQPLVTFRGHSAAVTCVAVSRSKRRFYSGSLD 615

Query: 140 GA 135
            +
Sbjct: 616 SS 617


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 17,719,742
Number of extensions: 389475
Number of successful extensions: 1149
Number of sequences better than 10.0: 2
Number of HSP's gapped: 1149
Number of HSP's successfully gapped: 2
Length of query: 216
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 120
Effective length of database: 11,555,919
Effective search space: 1386710280
Effective search space used: 1386710280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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