ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf43c23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001056685.1| Oryza sativa (japonica cultivar-group) Os03g0359100 (Os03g0359100) mRNA, partial cds Length = 2708 Score = 1526 bits (770), Expect = 0.0 Identities = 1261/1427 (88%), Gaps = 5/1427 (0%) Strand = Plus / Plus Query: 100 gccggagccggcggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcat 159 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104 gccggagccggtggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcat 163 Query: 160 gtactccttctcccagagggatgacatggatgtgcttgacgagcctctctacgctaattt 219 |||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 164 gtactccttcgcccagagggatgacatggaggtgctcgacgagccgctctacgctaattt 223 Query: 220 cctgcgtgtcactggcgttgacaggccctatcgccaggagcttctctctaaaatg----- 274 |||||| ||||| ||||| |||||||| |||||| |||||||||| ||||| ||| Sbjct: 224 cctgcgcgtcaccggcgtcgacaggccgtatcgcgaggagcttctgtctaacatgtgcag 283 Query: 275 gatcctgatggcaacaaagttgtcaaagaagtcatttttggaccaggagagaaagcatat 334 ||||||||||| ||||||||| ||| |||||||||||||| ||||| ||| | |||| Sbjct: 284 gatcctgatggtaacaaagttatcagtgaagtcatttttgggccagggaagagaaaatat 343 Query: 335 cgttactgcaagcacattgcgaagcagcgcctccctaatctcacaggtgacctgatgaag 394 |||||||||||||||||||| ||||||||||||||||| || || ||||||||||||| Sbjct: 344 cgttactgcaagcacattgcaaagcagcgcctccctaacctgtcaagtgacctgatgaaa 403 Query: 395 aagggaaaacatttcatattaatacgtaaccctatgaatatccttccgtcatttgataaa 454 |||||||||||||||||||| ||||| |||||| | |||||||| || |||||||| ||| Sbjct: 404 aagggaaaacatttcatattgatacgcaaccctctaaatatcctgccatcatttgacaaa 463 Query: 455 gttgttccaccatccttcctggagctcggtgtagcagaacttgtcgcaatatacagtgag 514 || || |||||||| ||| | |||||||| |||| ||||||||| | ||||||||||| Sbjct: 464 gtcgtcccaccatcattctttgagctcggcatagcggaacttgtctcgatatacagtgaa 523 Query: 515 ttgtgtgatcttgggagccctccacctgtgatagatgcagatgatctccaaagagatcct 574 |||||||| |||||||||||||| ||||||||||||||||| ||||| ||| | |||||| Sbjct: 524 ttgtgtgagcttgggagccctccgcctgtgatagatgcagacgatctacaacgggatcct 583 Query: 575 gaggctgtcttgagtggactctgtgaggacctgggtattcctttccagccacaaatgctc 634 |||||||||||||||||||| |||||||| || |||||||||| ||||||||||||||| Sbjct: 584 gaggctgtcttgagtggactatgtgaggatctaggtattccttatcagccacaaatgctc 643 Query: 635 aaatggaaagctggccccagggactttgatggtatttgggctccctggtggtatgaaagt 694 ||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 644 caatgggaagctggccccaaggactttgatggtatttgggctccctggtggtataggagt 703 Query: 695 gtacacacatcaacgggcttctcgaaatcccgtcgttaccctatgacttttccatttgca 754 ||||||| || || || ||||| | | || ||||| ||| |||||||||||||||| Sbjct: 704 gtacacaagtctactggtttctctatgccacgccgttatcctttgacttttccatttgct 763 Query: 755 ttttatgacctacttgagcaaagcttgcccttctacaatatgctgaagcgccaggtaagg 814 || ||||| |||||||| ||||||||||| || ||||| ||||||| ||||| ||||| Sbjct: 764 ttgtatgatctacttgaacaaagcttgccattttacaacgtgctgaaacgccatgtaagc 823 Query: 815 agaacagcaggatccctgctgccaccaccgcctgatcctcctcttcctgtaccaagaaat 874 | ||| |||||||| || ||| || ||||||||||||||||| ||||| |||| Sbjct: 824 aaaaccataggatccccgcaaccaacattacctgatcctcctcttccagtacctgaaaat 883 Query: 875 nnnnnnnttcttgtttgggttggaaatgagcttttgccacgtgatagtgcaagggtttca 934 ||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| Sbjct: 884 aaaaaaattcttgtttgggttggagatgagcttttgccccgtgatagtgcaaaggtttca 943 Query: 935 gtgttcgattcagttgtacaaggaggggatgctgtgtgggaaggattgcgtatatatgat 994 || || ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 944 gtatttgattcagttgtacaaggaggggatgctgtgtgggaaggattacgtatatacgat 1003 Query: 995 gggaaagtattcaaacttgaagaacacttggatagattgtttgattctacaaaagctatg 1054 |||||||| ||||||||||| |||||||||||||| |||||||||||| ||||||||||| Sbjct: 1004 gggaaagtgttcaaacttgatgaacacttggataggttgtttgattctgcaaaagctatg 1063 Query: 1055 gccttcagcaatgtgcccagtcgtgattggattaaggatgcaatatttaagactcttaat 1114 ||||||||||||||||| ||||||||||||||||||||||| || |||| |||||| ||| Sbjct: 1064 gccttcagcaatgtgcctagtcgtgattggattaaggatgccatctttaggactctcaat 1123 Query: 1115 gcaaatgggatgttcaatgatgcacatataaggctcactctcacccgtgggaagaaggtg 1174 |||||||| ||||||||| |||| ||||||||||| || ||||||||||||||||||||| Sbjct: 1124 gcaaatggaatgttcaataatgctcatataaggcttacactcacccgtgggaagaaggtg 1183 Query: 1175 acatctggaatgagtccagctttcaatctatatgggtgtgtcttgattgtacttgcggag 1234 |||||||||||||||||||||||||| || ||||| || |||||| || ||||| ||| Sbjct: 1184 acatctggaatgagtccagctttcaacctctatggatgcaccttgatagtgcttgcagag 1243 Query: 1235 tggaaaccaccagtttatgataactcacatgggattaagttggtaactgccaccacacgt 1294 |||||||||||||||||||||||||| ||||| || |||||||||||||||||||| || Sbjct: 1244 tggaaaccaccagtttatgataactcgcatggaataaagttggtaactgccaccacgcgg 1303 Query: 1295 cgtaattctccaaatagcgtagattcgaagatacatcacaacaatcttattaacaacatt 1354 ||||||||||| |||||| ||||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 1304 cgtaattctccgaatagcatagattcaaagatacatcacaacaatcttatcaacaatatt 1363 Query: 1355 ctggcaaagatagaaggtaatcttgcacaggctgaggatgctatcatgctagatcaagat 1414 ||||| |||||||| ||||| |||||||||||||||||||| |||||||||||| ||||| Sbjct: 1364 ctggcgaagatagagggtaaccttgcacaggctgaggatgccatcatgctagataaagat 1423 Query: 1415 ggttttgtatcagaaacaaatgcaacaaacatatttatggtcaagaagggcattgtattg 1474 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| Sbjct: 1424 ggttttgtatcagaaacaaatgcaacaaacatttttatggttaagaagggcattgtgttg 1483 Query: 1475 acacctcatgcggactactgccttccaggaattacccgtgcaactgt 1521 ||||||||||| || |||||||||||||| ||||| ||||||||||| Sbjct: 1484 acacctcatgctgagtactgccttccaggcattacgcgtgcaactgt 1530 Score = 178 bits (90), Expect = 5e-41 Identities = 171/198 (86%) Strand = Plus / Plus Query: 1520 gtcatggatcttattgtgaaagaaaacctggtattacatgaacggcgaattagtctatct 1579 |||||||||||| | || ||||| | |||||| ||||||||||| || |||||| |||| Sbjct: 2236 gtcatggatcttgtggtaaaagagagcctggtgttacatgaacgtcgcattagtttatca 2295 Query: 1580 gaatttcatgctgccgatgaggtgtggacaaccggaacaatgggcgaaattacaccggtt 1639 |||||||||||||| || ||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct: 2296 gaatttcatgctgcagacgaggtatggactactggaacgatgggtgaaatcacaccggtc 2355 Query: 1640 gtgatgattgacgggcgtgaaattggtgatgcgaaaatcggtccagtcacaagacaaatc 1699 || |||||||| || |||||||||||||| | |||||| ||||| ||||||||||||||| Sbjct: 2356 gtaatgattgatggtcgtgaaattggtgacgggaaaataggtccggtcacaagacaaatc 2415 Query: 1700 cagaacgcatacaaagtc 1717 ||||| |||||||||||| Sbjct: 2416 cagaatgcatacaaagtc 2433
>dbj|AK073091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022E01, full insert sequence Length = 2712 Score = 1526 bits (770), Expect = 0.0 Identities = 1261/1427 (88%), Gaps = 5/1427 (0%) Strand = Plus / Plus Query: 100 gccggagccggcggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcat 159 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106 gccggagccggtggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcat 165 Query: 160 gtactccttctcccagagggatgacatggatgtgcttgacgagcctctctacgctaattt 219 |||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 166 gtactccttcgcccagagggatgacatggaggtgctcgacgagccgctctacgctaattt 225 Query: 220 cctgcgtgtcactggcgttgacaggccctatcgccaggagcttctctctaaaatg----- 274 |||||| ||||| ||||| |||||||| |||||| |||||||||| ||||| ||| Sbjct: 226 cctgcgcgtcaccggcgtcgacaggccgtatcgcgaggagcttctgtctaacatgtgcag 285 Query: 275 gatcctgatggcaacaaagttgtcaaagaagtcatttttggaccaggagagaaagcatat 334 ||||||||||| ||||||||| ||| |||||||||||||| ||||| ||| | |||| Sbjct: 286 gatcctgatggtaacaaagttatcagtgaagtcatttttgggccagggaagagaaaatat 345 Query: 335 cgttactgcaagcacattgcgaagcagcgcctccctaatctcacaggtgacctgatgaag 394 |||||||||||||||||||| ||||||||||||||||| || || ||||||||||||| Sbjct: 346 cgttactgcaagcacattgcaaagcagcgcctccctaacctgtcaagtgacctgatgaaa 405 Query: 395 aagggaaaacatttcatattaatacgtaaccctatgaatatccttccgtcatttgataaa 454 |||||||||||||||||||| ||||| |||||| | |||||||| || |||||||| ||| Sbjct: 406 aagggaaaacatttcatattgatacgcaaccctctaaatatcctgccatcatttgacaaa 465 Query: 455 gttgttccaccatccttcctggagctcggtgtagcagaacttgtcgcaatatacagtgag 514 || || |||||||| ||| | |||||||| |||| ||||||||| | ||||||||||| Sbjct: 466 gtcgtcccaccatcattctttgagctcggcatagcggaacttgtctcgatatacagtgaa 525 Query: 515 ttgtgtgatcttgggagccctccacctgtgatagatgcagatgatctccaaagagatcct 574 |||||||| |||||||||||||| ||||||||||||||||| ||||| ||| | |||||| Sbjct: 526 ttgtgtgagcttgggagccctccgcctgtgatagatgcagacgatctacaacgggatcct 585 Query: 575 gaggctgtcttgagtggactctgtgaggacctgggtattcctttccagccacaaatgctc 634 |||||||||||||||||||| |||||||| || |||||||||| ||||||||||||||| Sbjct: 586 gaggctgtcttgagtggactatgtgaggatctaggtattccttatcagccacaaatgctc 645 Query: 635 aaatggaaagctggccccagggactttgatggtatttgggctccctggtggtatgaaagt 694 ||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 646 caatgggaagctggccccaaggactttgatggtatttgggctccctggtggtataggagt 705 Query: 695 gtacacacatcaacgggcttctcgaaatcccgtcgttaccctatgacttttccatttgca 754 ||||||| || || || ||||| | | || ||||| ||| |||||||||||||||| Sbjct: 706 gtacacaagtctactggtttctctatgccacgccgttatcctttgacttttccatttgct 765 Query: 755 ttttatgacctacttgagcaaagcttgcccttctacaatatgctgaagcgccaggtaagg 814 || ||||| |||||||| ||||||||||| || ||||| ||||||| ||||| ||||| Sbjct: 766 ttgtatgatctacttgaacaaagcttgccattttacaacgtgctgaaacgccatgtaagc 825 Query: 815 agaacagcaggatccctgctgccaccaccgcctgatcctcctcttcctgtaccaagaaat 874 | ||| |||||||| || ||| || ||||||||||||||||| ||||| |||| Sbjct: 826 aaaaccataggatccccgcaaccaacattacctgatcctcctcttccagtacctgaaaat 885 Query: 875 nnnnnnnttcttgtttgggttggaaatgagcttttgccacgtgatagtgcaagggtttca 934 ||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| Sbjct: 886 aaaaaaattcttgtttgggttggagatgagcttttgccccgtgatagtgcaaaggtttca 945 Query: 935 gtgttcgattcagttgtacaaggaggggatgctgtgtgggaaggattgcgtatatatgat 994 || || ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 946 gtatttgattcagttgtacaaggaggggatgctgtgtgggaaggattacgtatatacgat 1005 Query: 995 gggaaagtattcaaacttgaagaacacttggatagattgtttgattctacaaaagctatg 1054 |||||||| ||||||||||| |||||||||||||| |||||||||||| ||||||||||| Sbjct: 1006 gggaaagtgttcaaacttgatgaacacttggataggttgtttgattctgcaaaagctatg 1065 Query: 1055 gccttcagcaatgtgcccagtcgtgattggattaaggatgcaatatttaagactcttaat 1114 ||||||||||||||||| ||||||||||||||||||||||| || |||| |||||| ||| Sbjct: 1066 gccttcagcaatgtgcctagtcgtgattggattaaggatgccatctttaggactctcaat 1125 Query: 1115 gcaaatgggatgttcaatgatgcacatataaggctcactctcacccgtgggaagaaggtg 1174 |||||||| ||||||||| |||| ||||||||||| || ||||||||||||||||||||| Sbjct: 1126 gcaaatggaatgttcaataatgctcatataaggcttacactcacccgtgggaagaaggtg 1185 Query: 1175 acatctggaatgagtccagctttcaatctatatgggtgtgtcttgattgtacttgcggag 1234 |||||||||||||||||||||||||| || ||||| || |||||| || ||||| ||| Sbjct: 1186 acatctggaatgagtccagctttcaacctctatggatgcaccttgatagtgcttgcagag 1245 Query: 1235 tggaaaccaccagtttatgataactcacatgggattaagttggtaactgccaccacacgt 1294 |||||||||||||||||||||||||| ||||| || |||||||||||||||||||| || Sbjct: 1246 tggaaaccaccagtttatgataactcgcatggaataaagttggtaactgccaccacgcgg 1305 Query: 1295 cgtaattctccaaatagcgtagattcgaagatacatcacaacaatcttattaacaacatt 1354 ||||||||||| |||||| ||||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 1306 cgtaattctccgaatagcatagattcaaagatacatcacaacaatcttatcaacaatatt 1365 Query: 1355 ctggcaaagatagaaggtaatcttgcacaggctgaggatgctatcatgctagatcaagat 1414 ||||| |||||||| ||||| |||||||||||||||||||| |||||||||||| ||||| Sbjct: 1366 ctggcgaagatagagggtaaccttgcacaggctgaggatgccatcatgctagataaagat 1425 Query: 1415 ggttttgtatcagaaacaaatgcaacaaacatatttatggtcaagaagggcattgtattg 1474 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| Sbjct: 1426 ggttttgtatcagaaacaaatgcaacaaacatttttatggttaagaagggcattgtgttg 1485 Query: 1475 acacctcatgcggactactgccttccaggaattacccgtgcaactgt 1521 ||||||||||| || |||||||||||||| ||||| ||||||||||| Sbjct: 1486 acacctcatgctgagtactgccttccaggcattacgcgtgcaactgt 1532 Score = 178 bits (90), Expect = 5e-41 Identities = 171/198 (86%) Strand = Plus / Plus Query: 1520 gtcatggatcttattgtgaaagaaaacctggtattacatgaacggcgaattagtctatct 1579 |||||||||||| | || ||||| | |||||| ||||||||||| || |||||| |||| Sbjct: 2238 gtcatggatcttgtggtaaaagagagcctggtgttacatgaacgtcgcattagtttatca 2297 Query: 1580 gaatttcatgctgccgatgaggtgtggacaaccggaacaatgggcgaaattacaccggtt 1639 |||||||||||||| || ||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct: 2298 gaatttcatgctgcagacgaggtatggactactggaacgatgggtgaaatcacaccggtc 2357 Query: 1640 gtgatgattgacgggcgtgaaattggtgatgcgaaaatcggtccagtcacaagacaaatc 1699 || |||||||| || |||||||||||||| | |||||| ||||| ||||||||||||||| Sbjct: 2358 gtaatgattgatggtcgtgaaattggtgacgggaaaataggtccggtcacaagacaaatc 2417 Query: 1700 cagaacgcatacaaagtc 1717 ||||| |||||||||||| Sbjct: 2418 cagaatgcatacaaagtc 2435
>gb|BT009083.1| Triticum aestivum clone wkm1c.pk0004.c7:fis, full insert mRNA sequence Length = 1186 Score = 1471 bits (742), Expect = 0.0 Identities = 832/862 (96%) Strand = Plus / Plus Query: 1005 tcaaacttgaagaacacttggatagattgtttgattctacaaaagctatggccttcagca 1064 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8 tcaaacttgaagaacacttggatagattgtttgattctacaaaagctatggccttcagca 67 Query: 1065 atgtgcccagtcgtgattggattaaggatgcaatatttaagactcttaatgcaaatggga 1124 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 68 atgtgcccagtcgtgattggattaaggatgcaatatttaagactcttaacgcaaatggga 127 Query: 1125 tgttcaatgatgcacatataaggctcactctcacccgtgggaagaaggtgacatctggaa 1184 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 tgttcaataatgcacatataaggctcactctcacccgtgggaagaaggtgacatctggaa 187 Query: 1185 tgagtccagctttcaatctatatgggtgtgtcttgattgtacttgcggagtggaaaccac 1244 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 188 tgagtccaactttcaatctatatgggtgtgtcttgattgtacttgcagagtggaaaccac 247 Query: 1245 cagtttatgataactcacatgggattaagttggtaactgccaccacacgtcgtaattctc 1304 ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 248 cagtttatgataactcacatgggataaagttggtaactgccgccacacgtcgtaattctc 307 Query: 1305 caaatagcgtagattcgaagatacatcacaacaatcttattaacaacattctggcaaaga 1364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 caaatagcgtagattcgaagatacatcacaacaatcttattaacaacattctggcaaaga 367 Query: 1365 tagaaggtaatcttgcacaggctgaggatgctatcatgctagatcaagatggttttgtat 1424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 tagaaggtaatcttgcacaggctgaggatgctatcatgctagatcaagatggttttgtat 427 Query: 1425 cagaaacaaatgcaacaaacatatttatggtcaagaagggcattgtattgacacctcatg 1484 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 428 cagaaacaaatgcaacaaacatatttatggttaagaagggcattgtattgacacctcatg 487 Query: 1485 cggactactgccttccaggaattacccgtgcaactgtcatggatcttattgtgaaagaaa 1544 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 488 cggactactgccttccaggaattacccgtgcaactgtcaaggatcttgttgtgaaagaaa 547 Query: 1545 acctggtattacatgaacggcgaattagtctatctgaatttcatgctgccgatgaggtgt 1604 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 548 acctggtattacatgaacggcgaattagtctatctgaatttcatgctgcagatgaggtgt 607 Query: 1605 ggacaaccggaacaatgggcgaaattacaccggttgtgatgattgacgggcgtgaaattg 1664 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 608 ggacaaccggaacaatgggtgaaattacaccggttgtgatgattgacgggcgtgaaattg 667 Query: 1665 gtgatgcgaaaatcggtccagtcacaagacaaatccagaacgcatacaaagtcctgacag 1724 |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 668 gtgatgggaaaatcggtctggtcacaagacaaatccagagcgcatacaaagtcctgacag 727 Query: 1725 cagggttaggggtaccaatacccaggaacgcggaggcataatcatttgcgcggacattct 1784 ||||||| || ||| |||| |||||||| |||||||||||||||||||||| |||||||| Sbjct: 728 cagggttgggagtaacaattcccaggaatgcggaggcataatcatttgcgcagacattct 787 Query: 1785 tcttttccttttgaaaaggagaaggcacttgttatctatggacaaactttcagggcccag 1844 |||| ||||||||||||||||||||||| | |||||||||||||||||||||||| ||| Sbjct: 788 tcttgtccttttgaaaaggagaaggcacctattatctatggacaaactttcagggttcag 847 Query: 1845 ttgagagtaataacaataaata 1866 || ||||||| | |||||||| Sbjct: 848 tttcgagtaatgataataaata 869 Score = 143 bits (72), Expect = 3e-30 Identities = 105/116 (90%) Strand = Plus / Plus Query: 1876 gttcaaagaagcacccagtgaaagcggcacaccgaacagaaaagcgagtatttgaaaaat 1935 |||||||||||||||||||||||| ||||||||| |||||||| ||||||| ||||||| Sbjct: 994 gttcaaagaagcacccagtgaaagtggcacaccggacagaaaactgagtattcgaaaaat 1053 Query: 1936 acttgttgggtctatggattcatgatttattgtgtgcgtgtgtgcgccgaacctgt 1991 ||| | ||||||| || |||||||||||| ||||||| |||||||||||||||||| Sbjct: 1054 actggctgggtctgtgaattcatgatttactgtgtgcctgtgtgcgccgaacctgt 1109 Score = 46.1 bits (23), Expect = 0.51 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2009 tgtggctgatcctggaaatagaacagaaaat 2039 |||||||||||||||| | |||||||||||| Sbjct: 1107 tgtggctgatcctggacacagaacagaaaat 1137
>gb|AY106246.1| Zea mays PCO105094 mRNA sequence Length = 1477 Score = 993 bits (501), Expect = 0.0 Identities = 774/865 (89%) Strand = Plus / Plus Query: 882 ttcttgtttgggttggaaatgagcttttgccacgtgatagtgcaagggtttcagtgttcg 941 ||||||||||||||||| |||| |||||||| ||| | ||||||| |||||||||||| | Sbjct: 404 ttcttgtttgggttggagatgaacttttgccccgtaacagtgcaaaggtttcagtgtttg 463 Query: 942 attcagttgtacaaggaggggatgctgtgtgggaaggattgcgtatatatgatgggaaag 1001 ||||||||||||||||||| |||||||| |||||||| || |||||||||||||| |||| Sbjct: 464 attcagttgtacaaggaggagatgctgtttgggaaggtttacgtatatatgatggaaaag 523 Query: 1002 tattcaaacttgaagaacacttggatagattgtttgattctacaaaagctatggccttca 1061 |||||||| | || ||||| ||||| ||||||||||||||| |||||||||||||||||| Sbjct: 524 tattcaaattagatgaacatttggacagattgtttgattctgcaaaagctatggccttca 583 Query: 1062 gcaatgtgcccagtcgtgattggattaaggatgcaatatttaagactcttaatgcaaatg 1121 |||||||||| | ||||||||||||||||||||| || ||||||||||| | |||||||| Sbjct: 584 gcaatgtgcctactcgtgattggattaaggatgccatctttaagactctgattgcaaatg 643 Query: 1122 ggatgttcaatgatgcacatataaggctcactctcacccgtgggaagaaggtgacatctg 1181 | |||||||| |||| |||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 644 gaatgttcaacaatgctcatataaggctcacgctcacccgtgggaaaaaggtgacatctg 703 Query: 1182 gaatgagtccagctttcaatctatatgggtgtgtcttgattgtacttgcggagtggaaac 1241 |||||||||||||||||||||| |||||||||| ||||||||| ||||| |||||||||| Sbjct: 704 gaatgagtccagctttcaatctttatgggtgtgccttgattgtgcttgcagagtggaaac 763 Query: 1242 caccagtttatgataactcacatgggattaagttggtaactgccaccacacgtcgtaatt 1301 ||||||||||||||||||| |||||||| || ||||| ||||||||||||||||| |||| Sbjct: 764 caccagtttatgataactctcatgggataaaattggttactgccaccacacgtcgaaatt 823 Query: 1302 ctccaaatagcgtagattcgaagatacatcacaacaatcttattaacaacattctggcaa 1361 |||||||||| ||||||| ||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 824 ctccaaatagtatagattccaagattcatcacaacaatcttatcaacaatattctggcaa 883 Query: 1362 agatagaaggtaatcttgcacaggctgaggatgctatcatgctagatcaagatggttttg 1421 ||||||||||||||||||| |||||||||||||| || ||||||||| | ||||| |||| Sbjct: 884 agatagaaggtaatcttgcccaggctgaggatgccattatgctagataaggatggctttg 943 Query: 1422 tatcagaaacaaatgcaacaaacatatttatggtcaagaagggcattgtattgacacctc 1481 ||||||||||||| |||||||| || ||||||||||| ||||| |||||||||||||||| Sbjct: 944 tatcagaaacaaacgcaacaaatatttttatggtcaaaaagggaattgtattgacacctc 1003 Query: 1482 atgcggactactgccttccaggaattacccgtgcaactgtcatggatcttattgtgaaag 1541 |||| ||||| ||||||||||| ||||| || |||||||||||||||||| | ||||||| Sbjct: 1004 atgctgactattgccttccaggcattacgcgagcaactgtcatggatcttgtggtgaaag 1063 Query: 1542 aaaacctggtattacatgaacggcgaattagtctatctgaatttcatgctgccgatgagg 1601 ||||| | || ||||||||||| || |||||||| || ||||| |||||||| ||||||| Sbjct: 1064 aaaactttgtgttacatgaacgacgcattagtctgtcagaattccatgctgcagatgagg 1123 Query: 1602 tgtggacaaccggaacaatgggcgaaattacaccggttgtgatgattgacgggcgtgaaa 1661 | |||||||||||||||||||| ||||| ||||||||||| |||||||| || ||||||| Sbjct: 1124 tatggacaaccggaacaatgggtgaaatcacaccggttgtaatgattgatggacgtgaaa 1183 Query: 1662 ttggtgatgcgaaaatcggtccagtcacaagacaaatccagaacgcatacaaagtcctga 1721 | || || | |||||| ||||||||||| |||||||||||||| |||||||| |||||| Sbjct: 1184 tcggcgacgggaaaattggtccagtcactagacaaatccagaaggcatacaagatcctga 1243 Query: 1722 cagcagggttaggggtaccaatacc 1746 |||||||| ||| ||||| ||||| Sbjct: 1244 cagcagggcaaggagtaccgatacc 1268 Score = 240 bits (121), Expect = 2e-59 Identities = 268/317 (84%) Strand = Plus / Plus Query: 491 gaacttgtcgcaatatacagtgagttgtgtgatcttgggagccctccacctgtgatagat 550 ||||||||| ||||||||||||| || |||| ||||||||||| || |||||||||||| Sbjct: 13 gaacttgtctcaatatacagtgaattatgtggacttgggagcccaccccctgtgatagat 72 Query: 551 gcagatgatctccaaagagatcctgaggctgtcttgagtggactctgtgaggacctgggt 610 ||||||||||| ||| ||||||||||| ||| | ||||| ||||||||||| ||||| Sbjct: 73 gcagatgatctgcaacaggatcctgaggccgtcctaagtggtctctgtgaggatctgggc 132 Query: 611 attcctttccagccacaaatgctcaaatggaaagctggccccagggactttgatggtatt 670 ||||||||||||||||||||| | |||||| |||||||||||| ||| ||||||||||| Sbjct: 133 attcctttccagccacaaatgttgaaatgggaagctggccccaaggaatttgatggtata 192 Query: 671 tgggctccctggtggtatgaaagtgtacacacatcaacgggcttctcgaaatcccgtcgt 730 ||||| ||||||||||||| ||||| |||| || | || ||||| || | || | Sbjct: 193 tgggcaccctggtggtatgggagtgtgcacaagtcttcaggtttctctaagcctcgccaa 252 Query: 731 taccctatgacttttccatttgcattttatgacctacttgagcaaagcttgcccttctac 790 || ||| ||||||| ||||| | ||||||||||| ||||||||||||||||| |||||| Sbjct: 253 tatcctctgactttcccattcgtgttttatgacctgcttgagcaaagcttgcctttctac 312 Query: 791 aatatgctgaagcgcca 807 || |||||||||||||| Sbjct: 313 aacatgctgaagcgcca 329
>gb|BT019029.1| Zea mays clone Contig535.F mRNA sequence Length = 1152 Score = 971 bits (490), Expect = 0.0 Identities = 773/866 (89%), Gaps = 1/866 (0%) Strand = Plus / Plus Query: 882 ttcttgtttgggttggaaatgagcttttgccacgtgatagtgcaagggtttcag-tgttc 940 ||||||||||||||||| |||| |||||||| ||| | ||||||| ||||||| |||| Sbjct: 48 ttcttgtttgggttggagatgaacttttgccccgtaacagtgcaaaggtttcatctgttt 107 Query: 941 gattcagttgtacaaggaggggatgctgtgtgggaaggattgcgtatatatgatgggaaa 1000 |||||||||||||||||||| |||||||| |||||||| || |||||||||||||| ||| Sbjct: 108 gattcagttgtacaaggaggagatgctgtttgggaaggtttacgtatatatgatggaaaa 167 Query: 1001 gtattcaaacttgaagaacacttggatagattgtttgattctacaaaagctatggccttc 1060 ||||||||||| || ||||| ||||| ||||||||||||||| ||||||||||||||||| Sbjct: 168 gtattcaaactagatgaacatttggacagattgtttgattctgcaaaagctatggccttc 227 Query: 1061 agcaatgtgcccagtcgtgattggattaaggatgcaatatttaagactcttaatgcaaat 1120 ||||||||||| | ||||| ||||||||||||||| || ||||||||||| | ||||||| Sbjct: 228 agcaatgtgcctactcgtgtttggattaaggatgccatctttaagactctgattgcaaat 287 Query: 1121 gggatgttcaatgatgcacatataaggctcactctcacccgtgggaagaaggtgacatct 1180 || ||||||||| |||| |||||||||||||| |||||||||||||| |||||||||||| Sbjct: 288 ggaatgttcaataatgctcatataaggctcacgctcacccgtgggaaaaaggtgacatct 347 Query: 1181 ggaatgagtccagctttcaatctatatgggtgtgtcttgattgtacttgcggagtggaaa 1240 ||||||||||||||||||||||| |||||||||| ||||||||| ||||| ||||||||| Sbjct: 348 ggaatgagtccagctttcaatctttatgggtgtgccttgattgtgcttgcagagtggaaa 407 Query: 1241 ccaccagtttatgataactcacatgggattaagttggtaactgccaccacacgtcgtaat 1300 |||||||||||||||||||| |||||||| || ||||| ||||||||||||||||| || Sbjct: 408 ccaccagtttatgataactctcatgggataaaattggttactgccaccacacgtcgaaac 467 Query: 1301 tctccaaatagcgtagattcgaagatacatcacaacaatcttattaacaacattctggca 1360 ||||||||||| ||||||| |||||||||||||||||||||| ||||| ||||||||| Sbjct: 468 tctccaaatagtatagattccaagatacatcacaacaatcttaacaacaatattctggca 527 Query: 1361 aagatagaaggtaatcttgcacaggctgaggatgctatcatgctagatcaagatggtttt 1420 |||||||||||||||||||| |||||||||||||| || ||||||||| | ||||| ||| Sbjct: 528 aagatagaaggtaatcttgcccaggctgaggatgccattatgctagataaggatggcttt 587 Query: 1421 gtatcagaaacaaatgcaacaaacatatttatggtcaagaagggcattgtattgacacct 1480 |||||||||||||| |||||||| || ||||||||||| ||||| ||||||||||||||| Sbjct: 588 gtatcagaaacaaacgcaacaaatatttttatggtcaaaaagggaattgtattgacacct 647 Query: 1481 catgcggactactgccttccaggaattacccgtgcaactgtcatggatcttattgtgaaa 1540 ||||| ||||| ||||||||||| ||||| || |||||||||||||||||| | |||||| Sbjct: 648 catgctgactattgccttccaggcattacgcgagcaactgtcatggatcttgtggtgaaa 707 Query: 1541 gaaaacctggtattacatgaacggcgaattagtctatctgaatttcatgctgccgatgag 1600 ||||| | || ||||||||||| || |||||||| || ||||| |||||||| |||||| Sbjct: 708 gaaaattttgtgttacatgaacgacgcattagtctgtcagaattccatgctgcagatgag 767 Query: 1601 gtgtggacaaccggaacaatgggcgaaattacaccggttgtgatgattgacgggcgtgaa 1660 || |||||||||||||||||||| ||||||||||||||||| |||||||| || |||||| Sbjct: 768 gtatggacaaccggaacaatgggtgaaattacaccggttgtaatgattgatggacgtgaa 827 Query: 1661 attggtgatgcgaaaatcggtccagtcacaagacaaatccagaacgcatacaaagtcctg 1720 || || || | |||||| ||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 828 atcggcgacgggaaaattggtccagtcactagacaaatccagaaggcatacaagatcctg 887 Query: 1721 acagcagggttaggggtaccaatacc 1746 ||||||||| ||| ||||| ||||| Sbjct: 888 acagcagggcaaggagtaccgatacc 913
>dbj|AK063182.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-A12, full insert sequence Length = 396 Score = 365 bits (184), Expect = 4e-97 Identities = 265/292 (90%) Strand = Plus / Plus Query: 100 gccggagccggcggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcat 159 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105 gccggagccggtggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcat 164 Query: 160 gtactccttctcccagagggatgacatggatgtgcttgacgagcctctctacgctaattt 219 |||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 165 gtactccttcgcccagagggatgacatggaggtgctcgacgagccgctctacgctaattt 224 Query: 220 cctgcgtgtcactggcgttgacaggccctatcgccaggagcttctctctaaaatggatcc 279 |||||| ||||| ||||| |||||||| |||||| |||||||||| ||||| |||||||| Sbjct: 225 cctgcgcgtcaccggcgtcgacaggccgtatcgcgaggagcttctgtctaacatggatcc 284 Query: 280 tgatggcaacaaagttgtcaaagaagtcatttttggaccaggagagaaagcatatcgtta 339 |||||| ||||||||| ||| |||||||||||||| ||||| ||| | ||||||||| Sbjct: 285 tgatggtaacaaagttatcagtgaagtcatttttgggccagggaagagaaaatatcgtta 344 Query: 340 ctgcaagcacattgcgaagcagcgcctccctaatctcacaggtgacctgatg 391 ||||||||||||||| ||||||||||||||||| || || ||||||||||| Sbjct: 345 ctgcaagcacattgcaaagcagcgcctccctaacctgtcaagtgacctgatg 396
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 155 bits (78), Expect = 8e-34 Identities = 96/102 (94%) Strand = Plus / Minus Query: 928 ggtttcagtgttcgattcagttgtacaaggaggggatgctgtgtgggaaggattgcgtat 987 ||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 13778701 ggtttcagtatttgattcagttgtacaaggaggggatgctgtgtgggaaggattacgtat 13778642 Query: 988 atatgatgggaaagtattcaaacttgaagaacacttggatag 1029 ||| ||||||||||| ||||||||||| |||||||||||||| Sbjct: 13778641 atacgatgggaaagtgttcaaacttgatgaacacttggatag 13778600 Score = 137 bits (69), Expect = 2e-28 Identities = 81/85 (95%) Strand = Plus / Minus Query: 1362 agatagaaggtaatcttgcacaggctgaggatgctatcatgctagatcaagatggttttg 1421 ||||||| ||||| |||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 13777221 agatagagggtaaccttgcacaggctgaggatgccatcatgctagataaagatggttttg 13777162 Query: 1422 tatcagaaacaaatgcaacaaacat 1446 ||||||||||||||||||||||||| Sbjct: 13777161 tatcagaaacaaatgcaacaaacat 13777137 Score = 135 bits (68), Expect = 7e-28 Identities = 74/76 (97%) Strand = Plus / Minus Query: 100 gccggagccggcggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcat 159 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13781867 gccggagccggtggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcat 13781808 Query: 160 gtactccttctcccag 175 |||||||||| ||||| Sbjct: 13781807 gtactccttcgcccag 13781792 Score = 127 bits (64), Expect = 2e-25 Identities = 118/136 (86%) Strand = Plus / Minus Query: 443 tcatttgataaagttgttccaccatccttcctggagctcggtgtagcagaacttgtcgca 502 |||||||| ||||| || |||||||| ||| | |||||||| |||| ||||||||| | Sbjct: 13780682 tcatttgacaaagtcgtcccaccatcattctttgagctcggcatagcggaacttgtctcg 13780623 Query: 503 atatacagtgagttgtgtgatcttgggagccctccacctgtgatagatgcagatgatctc 562 ||||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 13780622 atatacagtgaattgtgtgagcttgggagccctccgcctgtgatagatgcagacgatcta 13780563 Query: 563 caaagagatcctgagg 578 ||| | |||||||||| Sbjct: 13780562 caacgggatcctgagg 13780547 Score = 123 bits (62), Expect = 3e-24 Identities = 92/102 (90%) Strand = Plus / Minus Query: 174 agagggatgacatggatgtgcttgacgagcctctctacgctaatttcctgcgtgtcactg 233 |||||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||| | Sbjct: 13781603 agagggatgacatggaggtgctcgacgagccgctctacgctaatttcctgcgcgtcaccg 13781544 Query: 234 gcgttgacaggccctatcgccaggagcttctctctaaaatgg 275 |||| |||||||| |||||| |||||||||| ||||| |||| Sbjct: 13781543 gcgtcgacaggccgtatcgcgaggagcttctgtctaacatgg 13781502 Score = 111 bits (56), Expect = 1e-20 Identities = 74/80 (92%) Strand = Plus / Minus Query: 1226 cttgcggagtggaaaccaccagtttatgataactcacatgggattaagttggtaactgcc 1285 ||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 13777579 cttgcagagtggaaaccaccagtttatgataactcgcatggaataaagttggtaactgcc 13777520 Query: 1286 accacacgtcgtaattctcc 1305 ||||| || ||||||||||| Sbjct: 13777519 accacgcggcgtaattctcc 13777500 Score = 109 bits (55), Expect = 4e-20 Identities = 153/188 (81%) Strand = Plus / Minus Query: 739 gacttttccatttgcattttatgacctacttgagcaaagcttgcccttctacaatatgct 798 ||||||||||||||| || ||||| |||||||| ||||||||||| || ||||| |||| Sbjct: 13778989 gacttttccatttgctttgtatgatctacttgaacaaagcttgccattttacaacgtgct 13778930 Query: 799 gaagcgccaggtaaggagaacagcaggatccctgctgccaccaccgcctgatcctcctct 858 ||| ||||| ||||| | ||| |||||||| || ||| || |||||||||||||| Sbjct: 13778929 gaaacgccatgtaagcaaaaccataggatccccgcaaccaacattacctgatcctcctct 13778870 Query: 859 tcctgtaccaagaaatnnnnnnnttcttgtttgggttggaaatgagcttttgccacgtga 918 ||| ||||| |||| ||||||||||||||||| ||||||||||||| ||||| Sbjct: 13778869 tccagtacctgaaaataaaaaaattcttgtttgggttggagatgagcttttgccccgtga 13778810 Query: 919 tagtgcaa 926 |||||||| Sbjct: 13778809 tagtgcaa 13778802 Score = 107 bits (54), Expect = 2e-19 Identities = 81/90 (90%) Strand = Plus / Minus Query: 1084 gattaaggatgcaatatttaagactcttaatgcaaatgggatgttcaatgatgcacatat 1143 |||||||||||| || |||| |||||| ||||||||||| ||||||||| |||| ||||| Sbjct: 13778208 gattaaggatgccatctttaggactctcaatgcaaatggaatgttcaataatgctcatat 13778149 Query: 1144 aaggctcactctcacccgtgggaagaaggt 1173 |||||| || |||||||||||||||||||| Sbjct: 13778148 aaggcttacactcacccgtgggaagaaggt 13778119 Score = 107 bits (54), Expect = 2e-19 Identities = 84/94 (89%) Strand = Plus / Minus Query: 345 agcacattgcgaagcagcgcctccctaatctcacaggtgacctgatgaagaagggaaaac 404 |||||||||| ||||||||||||||||| || || ||||||||||||| |||||||||| Sbjct: 13780897 agcacattgcaaagcagcgcctccctaacctgtcaagtgacctgatgaaaaagggaaaac 13780838 Query: 405 atttcatattaatacgtaaccctatgaatatcct 438 |||||||||| ||||| |||||| | |||||||| Sbjct: 13780837 atttcatattgatacgcaaccctctaaatatcct 13780804 Score = 99.6 bits (50), Expect = 4e-17 Identities = 68/74 (91%) Strand = Plus / Minus Query: 1448 tttatggtcaagaagggcattgtattgacacctcatgcggactactgccttccaggaatt 1507 |||||||| |||||||||||||| |||||||||||||| || |||||||||||||| ||| Sbjct: 13777006 tttatggttaagaagggcattgtgttgacacctcatgctgagtactgccttccaggcatt 13776947 Query: 1508 acccgtgcaactgt 1521 || ||||||||||| Sbjct: 13776946 acgcgtgcaactgt 13776933 Score = 93.7 bits (47), Expect = 2e-15 Identities = 68/75 (90%) Strand = Plus / Minus Query: 1643 atgattgacgggcgtgaaattggtgatgcgaaaatcggtccagtcacaagacaaatccag 1702 |||||||| || |||||||||||||| | |||||| ||||| |||||||||||||||||| Sbjct: 13774999 atgattgatggtcgtgaaattggtgacgggaaaataggtccggtcacaagacaaatccag 13774940 Query: 1703 aacgcatacaaagtc 1717 || |||||||||||| Sbjct: 13774939 aatgcatacaaagtc 13774925 Score = 91.7 bits (46), Expect = 1e-14 Identities = 52/54 (96%) Strand = Plus / Minus Query: 1031 ttgtttgattctacaaaagctatggccttcagcaatgtgcccagtcgtgattgg 1084 |||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct: 13778519 ttgtttgattctgcaaaagctatggccttcagcaatgtgcctagtcgtgattgg 13778466 Score = 89.7 bits (45), Expect = 4e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 637 atggaaagctggccccagggactttgatggtatttgggctccctggtggtatgaaagtgt 696 |||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 13780056 atgggaagctggccccaaggactttgatggtatttgggctccctggtggtataggagtgt 13779997 Query: 697 acaca 701 ||||| Sbjct: 13779996 acaca 13779992 Score = 77.8 bits (39), Expect = 1e-10 Identities = 54/59 (91%) Strand = Plus / Minus Query: 576 aggctgtcttgagtggactctgtgaggacctgggtattcctttccagccacaaatgctc 634 ||||||||||||||||||| |||||||| || |||||||||| ||||||||||||||| Sbjct: 13780227 aggctgtcttgagtggactatgtgaggatctaggtattccttatcagccacaaatgctc 13780169 Score = 69.9 bits (35), Expect = 3e-08 Identities = 71/83 (85%) Strand = Plus / Minus Query: 1520 gtcatggatcttattgtgaaagaaaacctggtattacatgaacggcgaattagtctatct 1579 |||||||||||| | || ||||| | |||||| ||||||||||| || |||||| |||| Sbjct: 13776227 gtcatggatcttgtggtaaaagagagcctggtgttacatgaacgtcgcattagtttatca 13776168 Query: 1580 gaatttcatgctgccgatgaggt 1602 |||||||||||||| || ||||| Sbjct: 13776167 gaatttcatgctgcagacgaggt 13776145 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Minus Query: 1314 tagattcgaagatacatcacaacaatcttattaacaacattctggc 1359 ||||||| ||||||||||||||||||||||| ||||| |||||||| Sbjct: 13777372 tagattcaaagatacatcacaacaatcttatcaacaatattctggc 13777327 Score = 65.9 bits (33), Expect = 5e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 274 ggatcctgatggcaacaaagttgtcaaagaagtcatttttggaccaggagagaaagcata 333 |||||||||||| ||||||||| ||| |||||||||||||| ||||| ||| | ||| Sbjct: 13781044 ggatcctgatggtaacaaagttatcagtgaagtcatttttgggccagggaagagaaaata 13780985 Query: 334 tcgttactgcaag 346 ||||||||||||| Sbjct: 13780984 tcgttactgcaag 13780972 Score = 63.9 bits (32), Expect = 2e-06 Identities = 38/40 (95%) Strand = Plus / Minus Query: 1170 aggtgacatctggaatgagtccagctttcaatctatatgg 1209 ||||||||||||||||||||||||||||||| || ||||| Sbjct: 13778002 aggtgacatctggaatgagtccagctttcaacctctatgg 13777963
>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048D11, from chromosome 3, complete sequence Length = 158911 Score = 155 bits (78), Expect = 8e-34 Identities = 96/102 (94%) Strand = Plus / Minus Query: 928 ggtttcagtgttcgattcagttgtacaaggaggggatgctgtgtgggaaggattgcgtat 987 ||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 60254 ggtttcagtatttgattcagttgtacaaggaggggatgctgtgtgggaaggattacgtat 60195 Query: 988 atatgatgggaaagtattcaaacttgaagaacacttggatag 1029 ||| ||||||||||| ||||||||||| |||||||||||||| Sbjct: 60194 atacgatgggaaagtgttcaaacttgatgaacacttggatag 60153 Score = 137 bits (69), Expect = 2e-28 Identities = 81/85 (95%) Strand = Plus / Minus Query: 1362 agatagaaggtaatcttgcacaggctgaggatgctatcatgctagatcaagatggttttg 1421 ||||||| ||||| |||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 58774 agatagagggtaaccttgcacaggctgaggatgccatcatgctagataaagatggttttg 58715 Query: 1422 tatcagaaacaaatgcaacaaacat 1446 ||||||||||||||||||||||||| Sbjct: 58714 tatcagaaacaaatgcaacaaacat 58690 Score = 135 bits (68), Expect = 7e-28 Identities = 74/76 (97%) Strand = Plus / Minus Query: 100 gccggagccggcggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcat 159 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63420 gccggagccggtggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcat 63361 Query: 160 gtactccttctcccag 175 |||||||||| ||||| Sbjct: 63360 gtactccttcgcccag 63345 Score = 127 bits (64), Expect = 2e-25 Identities = 118/136 (86%) Strand = Plus / Minus Query: 443 tcatttgataaagttgttccaccatccttcctggagctcggtgtagcagaacttgtcgca 502 |||||||| ||||| || |||||||| ||| | |||||||| |||| ||||||||| | Sbjct: 62235 tcatttgacaaagtcgtcccaccatcattctttgagctcggcatagcggaacttgtctcg 62176 Query: 503 atatacagtgagttgtgtgatcttgggagccctccacctgtgatagatgcagatgatctc 562 ||||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 62175 atatacagtgaattgtgtgagcttgggagccctccgcctgtgatagatgcagacgatcta 62116 Query: 563 caaagagatcctgagg 578 ||| | |||||||||| Sbjct: 62115 caacgggatcctgagg 62100 Score = 123 bits (62), Expect = 3e-24 Identities = 92/102 (90%) Strand = Plus / Minus Query: 174 agagggatgacatggatgtgcttgacgagcctctctacgctaatttcctgcgtgtcactg 233 |||||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||| | Sbjct: 63156 agagggatgacatggaggtgctcgacgagccgctctacgctaatttcctgcgcgtcaccg 63097 Query: 234 gcgttgacaggccctatcgccaggagcttctctctaaaatgg 275 |||| |||||||| |||||| |||||||||| ||||| |||| Sbjct: 63096 gcgtcgacaggccgtatcgcgaggagcttctgtctaacatgg 63055 Score = 111 bits (56), Expect = 1e-20 Identities = 74/80 (92%) Strand = Plus / Minus Query: 1226 cttgcggagtggaaaccaccagtttatgataactcacatgggattaagttggtaactgcc 1285 ||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 59132 cttgcagagtggaaaccaccagtttatgataactcgcatggaataaagttggtaactgcc 59073 Query: 1286 accacacgtcgtaattctcc 1305 ||||| || ||||||||||| Sbjct: 59072 accacgcggcgtaattctcc 59053 Score = 109 bits (55), Expect = 4e-20 Identities = 153/188 (81%) Strand = Plus / Minus Query: 739 gacttttccatttgcattttatgacctacttgagcaaagcttgcccttctacaatatgct 798 ||||||||||||||| || ||||| |||||||| ||||||||||| || ||||| |||| Sbjct: 60542 gacttttccatttgctttgtatgatctacttgaacaaagcttgccattttacaacgtgct 60483 Query: 799 gaagcgccaggtaaggagaacagcaggatccctgctgccaccaccgcctgatcctcctct 858 ||| ||||| ||||| | ||| |||||||| || ||| || |||||||||||||| Sbjct: 60482 gaaacgccatgtaagcaaaaccataggatccccgcaaccaacattacctgatcctcctct 60423 Query: 859 tcctgtaccaagaaatnnnnnnnttcttgtttgggttggaaatgagcttttgccacgtga 918 ||| ||||| |||| ||||||||||||||||| ||||||||||||| ||||| Sbjct: 60422 tccagtacctgaaaataaaaaaattcttgtttgggttggagatgagcttttgccccgtga 60363 Query: 919 tagtgcaa 926 |||||||| Sbjct: 60362 tagtgcaa 60355 Score = 107 bits (54), Expect = 2e-19 Identities = 81/90 (90%) Strand = Plus / Minus Query: 1084 gattaaggatgcaatatttaagactcttaatgcaaatgggatgttcaatgatgcacatat 1143 |||||||||||| || |||| |||||| ||||||||||| ||||||||| |||| ||||| Sbjct: 59761 gattaaggatgccatctttaggactctcaatgcaaatggaatgttcaataatgctcatat 59702 Query: 1144 aaggctcactctcacccgtgggaagaaggt 1173 |||||| || |||||||||||||||||||| Sbjct: 59701 aaggcttacactcacccgtgggaagaaggt 59672 Score = 107 bits (54), Expect = 2e-19 Identities = 84/94 (89%) Strand = Plus / Minus Query: 345 agcacattgcgaagcagcgcctccctaatctcacaggtgacctgatgaagaagggaaaac 404 |||||||||| ||||||||||||||||| || || ||||||||||||| |||||||||| Sbjct: 62450 agcacattgcaaagcagcgcctccctaacctgtcaagtgacctgatgaaaaagggaaaac 62391 Query: 405 atttcatattaatacgtaaccctatgaatatcct 438 |||||||||| ||||| |||||| | |||||||| Sbjct: 62390 atttcatattgatacgcaaccctctaaatatcct 62357 Score = 99.6 bits (50), Expect = 4e-17 Identities = 68/74 (91%) Strand = Plus / Minus Query: 1448 tttatggtcaagaagggcattgtattgacacctcatgcggactactgccttccaggaatt 1507 |||||||| |||||||||||||| |||||||||||||| || |||||||||||||| ||| Sbjct: 58559 tttatggttaagaagggcattgtgttgacacctcatgctgagtactgccttccaggcatt 58500 Query: 1508 acccgtgcaactgt 1521 || ||||||||||| Sbjct: 58499 acgcgtgcaactgt 58486 Score = 93.7 bits (47), Expect = 2e-15 Identities = 68/75 (90%) Strand = Plus / Minus Query: 1643 atgattgacgggcgtgaaattggtgatgcgaaaatcggtccagtcacaagacaaatccag 1702 |||||||| || |||||||||||||| | |||||| ||||| |||||||||||||||||| Sbjct: 56552 atgattgatggtcgtgaaattggtgacgggaaaataggtccggtcacaagacaaatccag 56493 Query: 1703 aacgcatacaaagtc 1717 || |||||||||||| Sbjct: 56492 aatgcatacaaagtc 56478 Score = 91.7 bits (46), Expect = 1e-14 Identities = 52/54 (96%) Strand = Plus / Minus Query: 1031 ttgtttgattctacaaaagctatggccttcagcaatgtgcccagtcgtgattgg 1084 |||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct: 60072 ttgtttgattctgcaaaagctatggccttcagcaatgtgcctagtcgtgattgg 60019 Score = 89.7 bits (45), Expect = 4e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 637 atggaaagctggccccagggactttgatggtatttgggctccctggtggtatgaaagtgt 696 |||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 61609 atgggaagctggccccaaggactttgatggtatttgggctccctggtggtataggagtgt 61550 Query: 697 acaca 701 ||||| Sbjct: 61549 acaca 61545 Score = 77.8 bits (39), Expect = 1e-10 Identities = 54/59 (91%) Strand = Plus / Minus Query: 576 aggctgtcttgagtggactctgtgaggacctgggtattcctttccagccacaaatgctc 634 ||||||||||||||||||| |||||||| || |||||||||| ||||||||||||||| Sbjct: 61780 aggctgtcttgagtggactatgtgaggatctaggtattccttatcagccacaaatgctc 61722 Score = 69.9 bits (35), Expect = 3e-08 Identities = 71/83 (85%) Strand = Plus / Minus Query: 1520 gtcatggatcttattgtgaaagaaaacctggtattacatgaacggcgaattagtctatct 1579 |||||||||||| | || ||||| | |||||| ||||||||||| || |||||| |||| Sbjct: 57780 gtcatggatcttgtggtaaaagagagcctggtgttacatgaacgtcgcattagtttatca 57721 Query: 1580 gaatttcatgctgccgatgaggt 1602 |||||||||||||| || ||||| Sbjct: 57720 gaatttcatgctgcagacgaggt 57698 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Minus Query: 1314 tagattcgaagatacatcacaacaatcttattaacaacattctggc 1359 ||||||| ||||||||||||||||||||||| ||||| |||||||| Sbjct: 58925 tagattcaaagatacatcacaacaatcttatcaacaatattctggc 58880 Score = 65.9 bits (33), Expect = 5e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 274 ggatcctgatggcaacaaagttgtcaaagaagtcatttttggaccaggagagaaagcata 333 |||||||||||| ||||||||| ||| |||||||||||||| ||||| ||| | ||| Sbjct: 62597 ggatcctgatggtaacaaagttatcagtgaagtcatttttgggccagggaagagaaaata 62538 Query: 334 tcgttactgcaag 346 ||||||||||||| Sbjct: 62537 tcgttactgcaag 62525 Score = 63.9 bits (32), Expect = 2e-06 Identities = 38/40 (95%) Strand = Plus / Minus Query: 1170 aggtgacatctggaatgagtccagctttcaatctatatgg 1209 ||||||||||||||||||||||||||||||| || ||||| Sbjct: 59555 aggtgacatctggaatgagtccagctttcaacctctatgg 59516
>gb|AY341870.1| Glycine max amino acid aminotransferase mRNA, partial cds Length = 560 Score = 141 bits (71), Expect = 1e-29 Identities = 285/355 (80%), Gaps = 1/355 (0%) Strand = Plus / Plus Query: 1178 tctggaatgagtccagctttcaatctatatgggtgtgtcttgattgtacttgcggagtgg 1237 ||||| |||||||||||||||||||| ||||||||| || ||||| ||||| || ||| Sbjct: 204 tctgggatgagtccagctttcaatctttatgggtgtacattaattgtgcttgctgaatgg 263 Query: 1238 aaaccaccagtttatgataactcacatgggattaagttggtaactgccaccacacgtcgt 1297 || || ||||| |||||||| ||| ||| || | |||||||| || ||||| ||| Sbjct: 264 aagcccccagtatatgataatacacgtggtatagttcttgtaactgctacaacacgccgt 323 Query: 1298 aattctccaaatagcgtagattcgaagatacatcacaacaatcttattaacaacattctg 1357 ||||| ||||||| | ||||||||||| |||||||| || ||| | || ||||| || Sbjct: 324 aattcaccaaataatttggattcgaagattcatcacaataaccttctcaataacatactt 383 Query: 1358 gcaaagatagaaggtaatcttgcacaggctgaggatgctatcatgctagatcaagatggt 1417 |||||||| ||||| ||| |||| | || || ||||| |||||||| || ||||||||| Sbjct: 384 gcaaagattgaaggcaataatgcaaaagcagatgatgcaatcatgctcgaccaagatggt 443 Query: 1418 tttgtatcagaaacaaatgcaacaaacatatttatggtcaagaaggg-cattgtattgac 1476 | | |||||||||| |||||||| ||||| ||| | || || ||||| | ||| ||||| Sbjct: 444 tatttatcagaaaccaatgcaactaacatttttgttgttaaaaagggcccgtgttttgac 503 Query: 1477 acctcatgcggactactgccttccaggaattacccgtgcaactgtcatggatctt 1531 |||||||| || ||||| ||||| || ||||| ||||||||||| ||||||||| Sbjct: 504 ccctcatgctgattactgtcttcctggcattactcgtgcaactgtaatggatctt 558
>emb|AJ549382.1|CAR549382 Cicer arietinum mRNA for branched-chain amino acid aminotransferase-like protein (aat gene), clone CanAAT Length = 1861 Score = 131 bits (66), Expect = 1e-26 Identities = 216/266 (81%) Strand = Plus / Plus Query: 1277 gtaactgccaccacacgtcgtaattctccaaatagcgtagattcgaagatacatcacaac 1336 ||||||||||| ||||| ||||| || ||||||| | ||||| ||||| |||||||| Sbjct: 1181 gtaactgccacaacacgccgtaactcaccaaataatttggattcaaagattcatcacaat 1240 Query: 1337 aatcttattaacaacattctggcaaagatagaaggtaatcttgcacaggctgaggatgct 1396 ||||| | || |||||||| ||||||||||||| ||| |||| | || || ||||| Sbjct: 1241 aatctcctcaataacattctagcaaagatagaagccaataatgcaaaagcagacgatgca 1300 Query: 1397 atcatgctagatcaagatggttttgtatcagaaacaaatgcaacaaacatatttatggtc 1456 |||||||| || ||||||||| |||||| ||||| ||||||||||| || || ||||| Sbjct: 1301 atcatgcttgacaaagatggttatgtatctgaaaccaatgcaacaaatatcttcatggta 1360 Query: 1457 aagaagggcattgtattgacacctcatgcggactactgccttccaggaattacccgtgca 1516 ||||| ||| ||| |||||||| ||||| || ||||| ||||| || ||||| || ||| Sbjct: 1361 aagaaaggccgtgttttgacaccacatgctgattactgtcttcctggcattactcgagca 1420 Query: 1517 actgtcatggatcttattgtgaaaga 1542 ||||| ||||||||| | |||||||| Sbjct: 1421 actgttatggatcttgtggtgaaaga 1446
>gb|AY555143.1| Zea may BAC clone c573L14, complete sequence Length = 144792 Score = 121 bits (61), Expect = 1e-23 Identities = 115/133 (86%) Strand = Plus / Minus Query: 446 tttgataaagttgttccaccatccttcctggagctcggtgtagcagaacttgtcgcaata 505 ||||||||||| ||||||||||||||| ||||||| || ||| ||||||||| ||||| Sbjct: 117270 tttgataaagtcgttccaccatccttcatggagcttggcataggcgaacttgtctcaata 117211 Query: 506 tacagtgagttgtgtgatcttgggagccctccacctgtgatagatgcagatgatctccaa 565 |||||||| || |||| ||||||||||| || ||||||||||||||||||||||| ||| Sbjct: 117210 tacagtgaattatgtggacttgggagcccaccccctgtgatagatgcagatgatctgcaa 117151 Query: 566 agagatcctgagg 578 |||||||||| Sbjct: 117150 caggatcctgagg 117138 Score = 65.9 bits (33), Expect = 5e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 383 gacctgatgaagaagggaaaacatttcatattaatacgtaaccct 427 ||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 117550 gacctcatgaagaagggaaaacatttcatattgatacggaaccct 117506 Score = 50.1 bits (25), Expect = 0.032 Identities = 58/69 (84%) Strand = Plus / Minus Query: 278 cctgatggcaacaaagttgtcaaagaagtcatttttggaccaggagagaaagcatatcgt 337 |||||||| || || ||||||||||| || |||||||| ||||| || ||| |||||| Sbjct: 117743 cctgatggaaataaggttgtcaaagaggtgatttttggcccaggggacaaaaagtatcgt 117684 Query: 338 tactgcaag 346 ||||||||| Sbjct: 117683 tactgcaag 117675
>gb|AY017776.1| Oryza sativa microsatellite MRG0101 containing (AG)X12, closest to marker C730, genomic sequence Length = 224 Score = 105 bits (53), Expect = 6e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 100 gccggagccggcggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcct 156 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 gccggagccggtggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcct 224
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 103 bits (52), Expect = 3e-18 Identities = 88/100 (88%) Strand = Plus / Minus Query: 176 agggatgacatggatgtgcttgacgagcctctctacgctaatttcctgcgtgtcactggc 235 |||||||||||||| ||||| |||||||| ||||||||||||||||||| ||||||||| Sbjct: 11393289 agggatgacatggaggtgctcgacgagccgctctacgctaatttcctgcaagtcactggc 11393230 Query: 236 gttgacaggccctatcgccaggagcttctctctaaaatgg 275 || |||||||| |||| | ||||||||| ||||| |||| Sbjct: 11393229 gtcgacaggccatatcacgcggagcttctttctaacatgg 11393190 Score = 69.9 bits (35), Expect = 3e-08 Identities = 63/71 (88%), Gaps = 1/71 (1%) Strand = Plus / Minus Query: 105 agccggcggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcatgtact 164 |||||| |||||| |||||||| |||||| ||| |||||||||||||||| ||||||||| Sbjct: 11397559 agccggtggtgattcacgcgtgttcggcgtcgc-ctccctcagcaccagcatcatgtact 11397501 Query: 165 ccttctcccag 175 | ||| ||||| Sbjct: 11397500 cattcacccag 11397490
>emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa0054O08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167806 Score = 103 bits (52), Expect = 3e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 176 agggatgacatggatgtgcttgacgagcctctctacgctaatttcctgcgtgtcactggc 235 |||||||||||||| ||||| |||||||| ||||||||||||||||||| ||||||||| Sbjct: 143675 agggatgacatggaggtgctcgacgagccgctctacgctaatttcctgcaagtcactggc 143734 Query: 236 gttgacaggccctatcgccaggagcttctctctaaaatgg 275 || |||||||| |||| | ||||||||| ||||| |||| Sbjct: 143735 gtcgacaggccatatcacgcggagcttctttctaacatgg 143774 Score = 69.9 bits (35), Expect = 3e-08 Identities = 63/71 (88%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 105 agccggcggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcatgtact 164 |||||| |||||| |||||||| |||||| ||| |||||||||||||||| ||||||||| Sbjct: 139405 agccggtggtgattcacgcgtgttcggcgtcgc-ctccctcagcaccagcatcatgtact 139463 Query: 165 ccttctcccag 175 | ||| ||||| Sbjct: 139464 cattcacccag 139474
>gb|BT013120.1| Lycopersicon esculentum clone 114410F, mRNA sequence Length = 1777 Score = 101 bits (51), Expect = 1e-17 Identities = 174/215 (80%) Strand = Plus / Plus Query: 1286 accacacgtcgtaattctccaaatagcgtagattcgaagatacatcacaacaatcttatt 1345 ||||| ||||||||||| ||||||| | ||||| ||||| || || ||||| ||| | Sbjct: 1217 accactcgtcgtaattcaccaaataatttggattcaaagattcaccataacaaccttctc 1276 Query: 1346 aacaacattctggcaaagatagaaggtaatcttgcacaggctgaggatgctatcatgcta 1405 ||||||||||| |||||||||||||||||| ||| |||||| ||||| |||||||| Sbjct: 1277 aacaacattcttgcaaagatagaaggtaataatgctggggctgatgatgcaatcatgctc 1336 Query: 1406 gatcaagatggttttgtatcagaaacaaatgcaacaaacatatttatggtcaagaagggc 1465 ||| ||||||| | ||| |||||||| ||||| ||||| ||||| |||| ||||| || Sbjct: 1337 gataaagatggctatgtgtcagaaactaatgctacaaatatattcttggtgaagaaaggg 1396 Query: 1466 attgtattgacacctcatgcggactactgccttcc 1500 ||| ||||||||||||| || || |||||||| Sbjct: 1397 cgtgtggtgacacctcatgctgattattgccttcc 1431 Score = 52.0 bits (26), Expect = 0.008 Identities = 50/58 (86%) Strand = Plus / Plus Query: 1566 gaattagtctatctgaatttcatgctgccgatgaggtgtggacaaccggaacaatggg 1623 ||||||| |||| |||||||| |||| ||||||||||||||||| ||||| ||||| Sbjct: 1497 gaattagcttatcagaatttcacactgctgatgaggtgtggacaacaggaactatggg 1554 Score = 46.1 bits (23), Expect = 0.51 Identities = 41/47 (87%) Strand = Plus / Plus Query: 140 tccctcagcaccagcctcatgtactccttctcccagagggatgacat 186 ||||| |||||||||||||||||||| || ||||||| ||||||| Sbjct: 68 tccctaagcaccagcctcatgtactcttttgcccagagaaatgacat 114
>ref|NM_122623.2| Arabidopsis thaliana catalytic (AT5G27410) mRNA, complete cds Length = 2023 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 143 ctcagcaccagcctcatgtactccttctcccagagggatgacatggatgtgcttgacgag 202 |||||||||| |||||||||||||| ||||||| |||||||| || |||||||| ||| Sbjct: 66 ctcagcaccactctcatgtactcctttgcccagagagatgacattgaagtgcttgatgag 125 Query: 203 cc 204 || Sbjct: 126 cc 127
>gb|BT000517.1| Arabidopsis thaliana putative branched-chain amino acid aminotransferase (At5g27410/F21A20_120) mRNA, complete cds Length = 1680 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 143 ctcagcaccagcctcatgtactccttctcccagagggatgacatggatgtgcttgacgag 202 |||||||||| |||||||||||||| ||||||| |||||||| || |||||||| ||| Sbjct: 37 ctcagcaccactctcatgtactcctttgcccagagagatgacattgaagtgcttgatgag 96 Query: 203 cc 204 || Sbjct: 97 cc 98
>gb|AF367323.1| Arabidopsis thaliana AT5g27410/F21A20_120 mRNA, complete cds Length = 1930 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 143 ctcagcaccagcctcatgtactccttctcccagagggatgacatggatgtgcttgacgag 202 |||||||||| |||||||||||||| ||||||| |||||||| || |||||||| ||| Sbjct: 65 ctcagcaccactctcatgtactcctttgcccagagagatgacattgaagtgcttgatgag 124 Query: 203 cc 204 || Sbjct: 125 cc 126
>dbj|AP006127.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT48O21, TM0211, complete sequence Length = 137303 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Minus Query: 174 agagggatgacatggatgtgcttgacgagcctctctacgctaatttcctgcgtgtcactg 233 ||||||||||||| || ||||| || ||||||||||| ||||| ||||| || ||||||| Sbjct: 65422 agagggatgacattgaagtgctggatgagcctctctatgctaacttccttcgagtcactg 65363 Query: 234 g 234 | Sbjct: 65362 g 65362 Score = 50.1 bits (25), Expect = 0.032 Identities = 58/69 (84%) Strand = Plus / Minus Query: 1378 tgcacaggctgaggatgctatcatgctagatcaagatggttttgtatcagaaacaaatgc 1437 |||| |||| || ||||| |||||||| || ||||||| ||||| || ||||| ||||| Sbjct: 57418 tgcaaaggcagatgatgcaatcatgcttgacaaagatggctttgtttctgaaaccaatgc 57359 Query: 1438 aacaaacat 1446 ||||||||| Sbjct: 57358 aacaaacat 57350
>ref|NM_111392.3| Arabidopsis thaliana catalytic (AT3G05190) mRNA, complete cds Length = 2147 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Plus Query: 143 ctcagcaccagcctcatgtactcctt 168 |||||||||||||||||||||||||| Sbjct: 106 ctcagcaccagcctcatgtactcctt 131
>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence, complete sequence Length = 140064 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Plus Query: 143 ctcagcaccagcctcatgtactcctt 168 |||||||||||||||||||||||||| Sbjct: 67503 ctcagcaccagcctcatgtactcctt 67528
>gb|AY090279.1| Arabidopsis thaliana AT3g05190/T12H1_16 mRNA, complete cds Length = 1668 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Plus Query: 143 ctcagcaccagcctcatgtactcctt 168 |||||||||||||||||||||||||| Sbjct: 46 ctcagcaccagcctcatgtactcctt 71
>gb|AF462849.1|AF462849 Arabidopsis thaliana putative branched-chain amino acid aminotransferase mRNA, complete cds Length = 2133 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Plus Query: 143 ctcagcaccagcctcatgtactcctt 168 |||||||||||||||||||||||||| Sbjct: 106 ctcagcaccagcctcatgtactcctt 131
>emb|BX824318.1|CNS0A5LC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH39ZG06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1901 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Plus Query: 143 ctcagcaccagcctcatgtactcctt 168 |||||||||||||||||||||||||| Sbjct: 76 ctcagcaccagcctcatgtactcctt 101
>gb|AC174299.9| Medicago truncatula clone mth2-80e19, complete sequence Length = 129721 Score = 50.1 bits (25), Expect = 0.032 Identities = 73/89 (82%) Strand = Plus / Plus Query: 140 tccctcagcaccagcctcatgtactccttctcccagagggatgacatggatgtgcttgac 199 ||||| ||||| || ||||||||||| || || || |||||||| || ||||| ||||| Sbjct: 85244 tccctaagcacaagtctcatgtactctttttctcaaagggatgatattgatgtccttgat 85303 Query: 200 gagcctctctacgctaatttcctgcgtgt 228 || |||||||| || ||||||| ||||| Sbjct: 85304 gaacctctctattctcatttcctccgtgt 85332 Score = 46.1 bits (23), Expect = 0.51 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1412 gatggttttgtatcagaaacaaatgcaacaaacat 1446 |||||||||||||| ||||| |||||||| ||||| Sbjct: 90880 gatggttttgtatctgaaacgaatgcaacgaacat 90914
>gb|AC134522.9| Medicago truncatula clone mth2-12g4, complete sequence Length = 129197 Score = 50.1 bits (25), Expect = 0.032 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1391 gatgctatcatgctagatcaagatggttttgtatcagaaacaaatgcaacaaa 1443 ||||| |||||||| ||| | |||||||||||||| ||||| ||||| ||||| Sbjct: 49344 gatgcaatcatgcttgataaggatggttttgtatctgaaaccaatgctacaaa 49396 Score = 42.1 bits (21), Expect = 7.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 174 agagggatgacatggatgtgcttgacgagcctctctacgctaatttcct 222 ||||| |||| || || |||||||| ||||||||||| ||| ||||||| Sbjct: 44300 agaggaatgatattgaagtgcttgatgagcctctctatgctcatttcct 44348
>gb|AC136288.23| Medicago truncatula clone mth2-13o7, complete sequence Length = 110437 Score = 50.1 bits (25), Expect = 0.032 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1391 gatgctatcatgctagatcaagatggttttgtatcagaaacaaatgcaacaaa 1443 ||||| |||||||| ||| | |||||||||||||| ||||| ||||| ||||| Sbjct: 39085 gatgcaatcatgcttgataaggatggttttgtatctgaaaccaatgctacaaa 39137 Score = 42.1 bits (21), Expect = 7.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 174 agagggatgacatggatgtgcttgacgagcctctctacgctaatttcct 222 ||||| |||| || || |||||||| ||||||||||| ||| ||||||| Sbjct: 34041 agaggaatgatattgaagtgcttgatgagcctctctatgctcatttcct 34089
>gb|U96385.1|PCU96385 Penicillium chrysogenum GATA transcription factor (nreB) gene, complete cds Length = 6275 Score = 50.1 bits (25), Expect = 0.032 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1198 caatctatatgggtgtgtcttgattgtac 1226 |||||||||||||| |||||||||||||| Sbjct: 6194 caatctatatgggtatgtcttgattgtac 6166
>gb|AC007382.3| Homo sapiens BAC clone RP11-288C18 from 2, complete sequence Length = 80547 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1078 tgattggattaaggatgcaatatt 1101 |||||||||||||||||||||||| Sbjct: 70989 tgattggattaaggatgcaatatt 70966
>ref|NM_001067984.1| Oryza sativa (japonica cultivar-group) Os08g0285200 (Os08g0285200) mRNA, partial cds Length = 1910 Score = 46.1 bits (23), Expect = 0.51 Identities = 23/23 (100%) Strand = Plus / Plus Query: 88 aatggcgtcgccgccggagccgg 110 ||||||||||||||||||||||| Sbjct: 117 aatggcgtcgccgccggagccgg 139
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 46.1 bits (23), Expect = 0.51 Identities = 23/23 (100%) Strand = Plus / Plus Query: 88 aatggcgtcgccgccggagccgg 110 ||||||||||||||||||||||| Sbjct: 11256243 aatggcgtcgccgccggagccgg 11256265
>dbj|AP005541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B05 Length = 149754 Score = 46.1 bits (23), Expect = 0.51 Identities = 23/23 (100%) Strand = Plus / Plus Query: 88 aatggcgtcgccgccggagccgg 110 ||||||||||||||||||||||| Sbjct: 91261 aatggcgtcgccgccggagccgg 91283
>dbj|AK112065.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-E05, full insert sequence Length = 1910 Score = 46.1 bits (23), Expect = 0.51 Identities = 23/23 (100%) Strand = Plus / Plus Query: 88 aatggcgtcgccgccggagccgg 110 ||||||||||||||||||||||| Sbjct: 117 aatggcgtcgccgccggagccgg 139
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 46.1 bits (23), Expect = 0.51 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1346 aacaacattctggcaaagataga 1368 ||||||||||||||||||||||| Sbjct: 834894 aacaacattctggcaaagataga 834916
>gb|AC187294.1| Glycine max clone gmw1-105h23, complete sequence Length = 134287 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1780 attcttcttttccttttgaaaa 1801 |||||||||||||||||||||| Sbjct: 4250 attcttcttttccttttgaaaa 4271
>gb|AY713479.1| Uncultured Poribacteria bacterium 64K2 putative transposase, putative isoleucyl-tRNA synthetase, putative oxidoreductase medium subunit, putative oxidoreductase small subunit, putative oxidoreductase large subunit, and putative MaoD-like protein genes, complete cds; 16S ribosomal RNA and tRNA-Ile genes, complete sequence; hypothetical proteins, hypothetical deacetylase, hypothetical deoxygenase, putative branched chain amino acid aminotransferase, and putative imidazoleglycerol-phosphate synthase genes, complete cds; and hypothetical protein gene, partial cds Length = 38785 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1316 gattcgaagatacatcacaacaatcttattaacaacat 1353 ||||| ||||| ||||||||||| || ||||||||||| Sbjct: 36300 gattctaagatccatcacaacaacctgattaacaacat 36263
>gb|AC099629.6| Mus musculus chromosome 15, clone RP24-86K17, complete sequence Length = 175809 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1426 agaaacaaatgcaacaaacata 1447 |||||||||||||||||||||| Sbjct: 41139 agaaacaaatgcaacaaacata 41160
>gb|AC162919.5| Mus musculus BAC clone RP23-365O8 from chromosome 6, complete sequence Length = 193362 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 956 ggaggggatgctgtgtgggaaggatt 981 |||||||||||| ||||||||||||| Sbjct: 67228 ggaggggatgctctgtgggaaggatt 67203
>emb|Z99110.2|BSUB0007 Bacillus subtilis complete genome (section 7 of 21): from 1209742 to 1410982 Length = 201241 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 393 agaagggaaaacatttcatatt 414 |||||||||||||||||||||| Sbjct: 106656 agaagggaaaacatttcatatt 106677
>gb|AF034138.1|AF034138 Bacillus subtilis yjoB gene, partial cds; aspartate phosphatase of the phosphorelay (rapA), pre-inhibitor protein of RapA (phrA), yjpA, N-acetylmuramoyl-L-alanine amidase (xlyB), yjqA, yjqB, yjqC, and xkdA genes, complete cds Length = 5761 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 393 agaagggaaaacatttcatatt 414 |||||||||||||||||||||| Sbjct: 1815 agaagggaaaacatttcatatt 1836
>gb|AC019195.10| Homo sapiens BAC clone RP11-355K7 from 2, complete sequence Length = 143823 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 398 ggaaaacatttcatattaatac 419 |||||||||||||||||||||| Sbjct: 49232 ggaaaacatttcatattaatac 49253
>emb|X56679.1|BSGSIAAB B.subtilis gsiAA and gsiAB genes Length = 1629 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 393 agaagggaaaacatttcatatt 414 |||||||||||||||||||||| Sbjct: 1513 agaagggaaaacatttcatatt 1534
>gb|AC171730.2| Solanum lycopersicum chromosome 1 clone C01HBa0256E08, complete sequence Length = 170158 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1438 aacaaacatatttatggtcaa 1458 ||||||||||||||||||||| Sbjct: 162535 aacaaacatatttatggtcaa 162555
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 cgccgccggagccggcggtga 116 ||||||||||||||||||||| Sbjct: 4226565 cgccgccggagccggcggtga 4226585
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1095 caatatttaagactcttaatg 1115 ||||||||||||||||||||| Sbjct: 10295769 caatatttaagactcttaatg 10295749
>gb|AC160454.31| Glycine max clone gmw1-15k6, complete sequence Length = 148858 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1781 ttcttcttttccttttgaaaa 1801 ||||||||||||||||||||| Sbjct: 111939 ttcttcttttccttttgaaaa 111919
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1867 gtcgctattgttcaaagaagc 1887 ||||||||||||||||||||| Sbjct: 2467724 gtcgctattgttcaaagaagc 2467704
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 cgtcgccgccggagccggcgg 113 ||||||||||||||||||||| Sbjct: 5115293 cgtcgccgccggagccggcgg 5115313
>gb|AC152353.1| Pan troglodytes chromosome X clone RP43-001P01 map human ortholog p22.31, complete sequence Length = 218326 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 754 attttatgacctacttgagca 774 ||||||||||||||||||||| Sbjct: 14966 attttatgacctacttgagca 14946
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 821 gcaggatccctgctgccaccaccgc 845 ||||||||||||| ||||||||||| Sbjct: 530245 gcaggatccctgcggccaccaccgc 530269
>gb|AC074034.19| Homo sapiens Xp BAC RP11-143E20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111461 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 754 attttatgacctacttgagca 774 ||||||||||||||||||||| Sbjct: 26207 attttatgacctacttgagca 26187
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 943 ttcagttgtacaaggagggga 963 ||||||||||||||||||||| Sbjct: 1168277 ttcagttgtacaaggagggga 1168257
>gb|AC010052.7| Drosophila melanogaster 3L BAC RP98-5G1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164941 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1095 caatatttaagactcttaatg 1115 ||||||||||||||||||||| Sbjct: 2904 caatatttaagactcttaatg 2884
>emb|AL121894.26|HSA218C14 Human DNA sequence from clone RP11-218C14 on chromosome 20 Contains the 3' end of a novel gene, two genes for novel proteins similar to cystatin 9-like (mouse) (CST9L), the CST9L gene for cystatin 9-like (mouse), a cystatin 9-like (mouse) pseudogene, the CST3 gene for cystatin C, a novel gene and a CpG island, complete sequence Length = 141079 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 741 cttttccatttgcattttatgacct 765 ||||||||||| ||||||||||||| Sbjct: 74828 cttttccattttcattttatgacct 74852
>gb|BC017209.1|BC017209 Homo sapiens, clone IMAGE:3956555, mRNA, partial cds Length = 4228 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 960 gggatgctgtgtgggaaggat 980 ||||||||||||||||||||| Sbjct: 3127 gggatgctgtgtgggaaggat 3107
>gb|BC008000.1| Homo sapiens cDNA clone IMAGE:3504047 Length = 4220 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 960 gggatgctgtgtgggaaggat 980 ||||||||||||||||||||| Sbjct: 3118 gggatgctgtgtgggaaggat 3098
>emb|CR378670.1| Photobacterium profundum SS9; segment 8/12 Length = 348672 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1912 cagaaaagcgagtatttgaaaaata 1936 ||||||||| ||||||||||||||| Sbjct: 12736 cagaaaagccagtatttgaaaaata 12760
>emb|CR937046.1|PT147K15 Pan troglodytes chromosome 11 BAC PTB-147K15, complete sequence Length = 197298 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 426 ctatgaatatccttccgtcat 446 ||||||||||||||||||||| Sbjct: 91013 ctatgaatatccttccgtcat 90993
>gb|AC073916.41| Homo sapiens 12 BAC RP11-408I18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 205283 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 960 gggatgctgtgtgggaaggat 980 ||||||||||||||||||||| Sbjct: 202073 gggatgctgtgtgggaaggat 202053
>gb|AC138059.3| Homo sapiens chromosome 3 clone RP11-195M4, complete sequence Length = 191397 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 426 ctatgaatatccttccgtcat 446 ||||||||||||||||||||| Sbjct: 161147 ctatgaatatccttccgtcat 161127
>gb|AC137673.2| Homo sapiens chromosome 3 clone CTD-2195M5, complete sequence Length = 139791 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 426 ctatgaatatccttccgtcat 446 ||||||||||||||||||||| Sbjct: 56662 ctatgaatatccttccgtcat 56642
>emb|BX571674.7| Zebrafish DNA sequence from clone DKEY-193C22 in linkage group 5, complete sequence Length = 195181 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1430 acaaatgcaacaaacatattt 1450 ||||||||||||||||||||| Sbjct: 149774 acaaatgcaacaaacatattt 149794 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 387,452,950 Number of extensions: 20968457 Number of successful extensions: 124644 Number of sequences better than 10.0: 62 Number of HSP's gapped: 124640 Number of HSP's successfully gapped: 119 Length of query: 2065 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2042 Effective length of database: 18,503,978,556 Effective search space: 37785124211352 Effective search space used: 37785124211352 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
