ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf43b06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK064995:Os12g0197500 | 299 | 2e-81 | 2 | AK064217:Os12g0197500 | 299 | 2e-81 | 3 | AK100699:Os12g0197700 | 220 | 1e-57 | 4 | AK109447:Os07g0608400 | 39 | 0.006 | 5 | AK100169:Os06g0486000 | 36 | 0.066 | 6 | Os07g0489900:Os07g0489900 | 33 | 0.33 | 7 | AK121202:Os12g0561900 | 33 | 0.43 | 8 | AK060965:Os12g0561900 | 33 | 0.43 | 9 | AK110166: | 32 | 0.73 | 10 | AK110578: | 30 | 2.8 | 11 | Os03g0789000:Os03g0789000 | 30 | 3.6 | 12 | Os11g0598900:Os11g0598900 | 29 | 6.2 | 13 | AK110145:Os09g0535200 | 29 | 6.2 | 14 | AY341852:Os03g0758900 | 29 | 8.1 | 15 | AY341848:Os03g0758900 | 29 | 8.1 |
|---|
>AK064995:Os12g0197500 | Length = 609 Score = 299 bits (766), Expect = 2e-81 Identities = 155/280 (55%), Positives = 186/280 (66%), Gaps = 5/280 (1%) Frame = +1 Query: 94 WETIEKK-KKPGQTSGRGQWAPWGSSSNAPPTTARQAWXXXXXXXXXXXXWAQPSDRRPA 270 WET+EK+ KKP Q G+GQW W S + AP TA ++ + SDRRPA Sbjct: 24 WETVEKRVKKPAQQVGKGQWGQWNSPNAAPAPTAPRSGSGAFHHSGNTL--VRHSDRRPA 81 Query: 271 ARGNPRASSQTKSTEPDLQAPNPVVTPPLANGWQWASRPRPSGPESSKDDVASSGLDSEA 450 RG PR Q +S E +LQAP+ VVT PLANGWQW +R P G ES + + SG D E Sbjct: 82 -RGTPRPPPQNRSIEAELQAPHGVVTAPLANGWQWGARSCPPGTESKEGGLPLSGCDPET 140 Query: 451 NNPE----AEXXXXXXXXXXXXXXXXXXXXEKSFETRKMNKWFKSFFEVIDTLSVDQIHE 618 +N E ++ EKSFETRK +K FK FFEV++ LSV+Q++E Sbjct: 141 DNAEGYDTSDDDNDDDMSDDLSDDYDSDASEKSFETRKNHKLFKGFFEVLEALSVEQLNE 200 Query: 619 HTRQWHCPACKNGPGAIDWFKGLQSLVTHARTKGSKRVKLHRXXXXXXXXXMSRRGSSVV 798 TRQWHCPACKNGPGAIDW+KGLQ L+THA+TKGS +VK HR +SRRG+SVV Sbjct: 201 PTRQWHCPACKNGPGAIDWYKGLQPLMTHAKTKGSIKVKRHRELASLLEEELSRRGTSVV 260 Query: 799 PSGEQFGKWKGLRESTDREIVWPPMVIVMNTLLEKDEDDK 918 PSGEQF KWKGLRESTDREIVWPPMV+VMNT+LE+DEDDK Sbjct: 261 PSGEQFRKWKGLRESTDREIVWPPMVVVMNTVLEQDEDDK 300
>AK064217:Os12g0197500 | Length = 493 Score = 299 bits (766), Expect = 2e-81 Identities = 155/280 (55%), Positives = 186/280 (66%), Gaps = 5/280 (1%) Frame = +1 Query: 94 WETIEKK-KKPGQTSGRGQWAPWGSSSNAPPTTARQAWXXXXXXXXXXXXWAQPSDRRPA 270 WET+EK+ KKP Q G+GQW W S + AP TA ++ + SDRRPA Sbjct: 24 WETVEKRVKKPAQQVGKGQWGQWNSPNAAPAPTAPRSGSGAFHHSGNTL--VRHSDRRPA 81 Query: 271 ARGNPRASSQTKSTEPDLQAPNPVVTPPLANGWQWASRPRPSGPESSKDDVASSGLDSEA 450 RG PR Q +S E +LQAP+ VVT PLANGWQW +R P G ES + + SG D E Sbjct: 82 -RGTPRPPPQNRSIEAELQAPHGVVTAPLANGWQWGARSCPPGTESKEGGLPLSGCDPET 140 Query: 451 NNPE----AEXXXXXXXXXXXXXXXXXXXXEKSFETRKMNKWFKSFFEVIDTLSVDQIHE 618 +N E ++ EKSFETRK +K FK FFEV++ LSV+Q++E Sbjct: 141 DNAEGYDTSDDDNDDDMSDDLSDDYDSDASEKSFETRKNHKLFKGFFEVLEALSVEQLNE 200 Query: 619 HTRQWHCPACKNGPGAIDWFKGLQSLVTHARTKGSKRVKLHRXXXXXXXXXMSRRGSSVV 798 TRQWHCPACKNGPGAIDW+KGLQ L+THA+TKGS +VK HR +SRRG+SVV Sbjct: 201 PTRQWHCPACKNGPGAIDWYKGLQPLMTHAKTKGSIKVKRHRELASLLEEELSRRGTSVV 260 Query: 799 PSGEQFGKWKGLRESTDREIVWPPMVIVMNTLLEKDEDDK 918 PSGEQF KWKGLRESTDREIVWPPMV+VMNT+LE+DEDDK Sbjct: 261 PSGEQFRKWKGLRESTDREIVWPPMVVVMNTVLEQDEDDK 300
>AK100699:Os12g0197700 | Length = 682 Score = 220 bits (561), Expect = 1e-57 Identities = 143/352 (40%), Positives = 172/352 (48%), Gaps = 80/352 (22%) Frame = +1 Query: 103 IEKKKKPGQTS-GRGQWAPWGSSSNAP-PTTARQAWXXXXXXXXXXXXWAQPSDRRPAAR 276 +EKK K + S G+GQ AP SS+ AP P A QA Q SD RPAAR Sbjct: 28 VEKKSKKSEKSVGKGQCAPCTSSNAAPKPAMAWQARSGNGSLHPPGNGRVQHSDHRPAAR 87 Query: 277 GNPRASSQTKSTEPDLQAPNPVVTPPLANG--W--------------------------- 369 G+PR+ Q K TE LQAP PVVT PLANG W Sbjct: 88 GSPRSLPQNKHTETKLQAPCPVVTAPLANGLQWVPKSRSSGSESNMDDAPTSGSDPEMDN 147 Query: 370 ---------------QWASRPRPSGPESSKDDVASSGLD--------------------- 441 QW R R S +S+KDD ++ D Sbjct: 148 GATHPVVTATLANGLQWVPRSRSSDSQSNKDDAPTASSDPETDNVAPHPVVSAPVANGLQ 207 Query: 442 ---------SEANNPEA----EXXXXXXXXXXXXXXXXXXXXEKSFETRKMNKWFKSFFE 582 SE +N E + EK+FETRK +K KS FE Sbjct: 208 WVPRSHSSGSEMDNGEDYDSYDDDSDDDMVDDTSGDFDSKASEKNFETRKRHKLLKSIFE 267 Query: 583 VIDTLSVDQIHEHTRQWHCPACKNGPGAIDWFKGLQSLVTHARTKGSKRVKLHRXXXXXX 762 +++ LSV+QI+E TRQWHCPACKN G + W+KGLQ L+ HARTKGSKRVKLHR Sbjct: 268 LLEKLSVEQINEKTRQWHCPACKNVRGGVTWYKGLQPLMNHARTKGSKRVKLHRELAALL 327 Query: 763 XXXMSRRGSSVVPSGEQFGKWKGLRESTDREIVWPPMVIVMNTLLEKDEDDK 918 + R G S+ SGE FG WKGLRE+TDR IVWPP+VI+MNT LE+D+D K Sbjct: 328 EEELYRTGISMASSGEFFGIWKGLRENTDRPIVWPPVVIIMNTRLEQDKDGK 379
>AK109447:Os07g0608400 | Length = 278 Score = 39.3 bits (90), Expect = 0.006 Identities = 32/140 (22%), Positives = 47/140 (33%) Frame = +1 Query: 244 AQPSDRRPAARGNPRASSQTKSTEPDLQAPNPVVTPPLANGWQWASRPRPSGPESSKDDV 423 A+P + ++S++TKS+EP + P P PP+ N R GP+ + Sbjct: 141 AKPPSANNHSNSKSKSSNKTKSSEPRAKQPKPQPQPPVKN----EGREEEGGPDDEEGGG 196 Query: 424 ASSGLDSEANNPEAEXXXXXXXXXXXXXXXXXXXXEKSFETRKMNKWFKSFFEVIDTLSV 603 G E + E E KWF I Sbjct: 197 GGGGGGREEEHGETLCGACGESYGADEFWICCDICE---------KWFHGKCVKITPAKA 247 Query: 604 DQIHEHTRQWHCPACKNGPG 663 EH +Q+ CP+C G G Sbjct: 248 ----EHIKQYKCPSCSGGNG 263
>AK100169:Os06g0486000 | Length = 748 Score = 35.8 bits (81), Expect = 0.066 Identities = 25/101 (24%), Positives = 36/101 (35%), Gaps = 3/101 (2%) Frame = +1 Query: 106 EKKKKPGQTSGRGQWAPWGSSSNAPPTTARQAWXXXXXXXXXXXXWAQPSDRRPAARGN- 282 E P ++SG G G S+ PP W P+ N Sbjct: 116 EAPSPPSESSGNGGGGGGGGRSSPPPN-----WSPPPQQQQQHQSGGSTPSPPPSPSSNQ 170 Query: 283 --PRASSQTKSTEPDLQAPNPVVTPPLANGWQWASRPRPSG 399 P + S S+EP +P +PP ++G P+PSG Sbjct: 171 PPPSSGSSASSSEPSPPRSSPPPSPPQSSGGNNGQPPKPSG 211
>Os07g0489900:Os07g0489900 | Length = 653 Score = 33.5 bits (75), Expect = 0.33 Identities = 20/65 (30%), Positives = 29/65 (44%) Frame = -1 Query: 1135 RINRNPGVPATLHIKHHPEGGGNVATYHHSKLAILCKQHQMLVDNILQIQR*IHRTHATC 956 R++R P + + HHP G VA H + H+ VD ++ +R HR HA Sbjct: 169 RLSRRPDLAGLHRLPHHPRHDGGVAHVLHVQPRPPHAAHEPAVDLLVGEERPAHRRHALD 228 Query: 955 KALGR 941 L R Sbjct: 229 GGLQR 233
>AK121202:Os12g0561900 | Length = 162 Score = 33.1 bits (74), Expect = 0.43 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%) Frame = +1 Query: 145 QWAPWGSSSNAPPTTARQAWXXXXXXXXXXXXWAQPSDRRPAARGNPRASSQTKSTEPDL 324 +W P G++S+ P+ + + W + S A+R +P ASS+ + +P Sbjct: 6 RWRPCGAASSGSPSRSGR--------------WPRGS----ASRSSPSASSRHRPPDPAA 47 Query: 325 QAPNP---VVTPPLANGWQWA-SRP 387 AP+P TPP + W SRP Sbjct: 48 AAPSPEKKTTTPPTPSSAGWTPSRP 72
>AK060965:Os12g0561900 | Length = 162 Score = 33.1 bits (74), Expect = 0.43 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%) Frame = +1 Query: 145 QWAPWGSSSNAPPTTARQAWXXXXXXXXXXXXWAQPSDRRPAARGNPRASSQTKSTEPDL 324 +W P G++S+ P+ + + W + S A+R +P ASS+ + +P Sbjct: 6 RWRPCGAASSGSPSRSGR--------------WPRGS----ASRSSPSASSRHRPPDPAA 47 Query: 325 QAPNP---VVTPPLANGWQWA-SRP 387 AP+P TPP + W SRP Sbjct: 48 AAPSPEKKTTTPPTPSSAGWTPSRP 72
>AK110166: | Length = 947 Score = 32.3 bits (72), Expect = 0.73 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 7/66 (10%) Frame = +1 Query: 250 PSDRRPAAR------GNPRASSQTKSTEPDLQAPNPVVTPPLANGWQWA-SRPRPSGPES 408 PS RP AR G+ S ++ T PDL+A +P ++P W S P +G + Sbjct: 213 PSHLRPPARPPLQRTGSGTTSWTSEQTSPDLEATSPRLSPTANFSGSWTRSGPSTNGSAT 272 Query: 409 SKDDVA 426 S D++ Sbjct: 273 SPQDLS 278
>AK110578: | Length = 393 Score = 30.4 bits (67), Expect = 2.8 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Frame = +1 Query: 265 PAARGNPRAS-SQTKSTEPDLQAPNPVVTPPLANGWQWASRPRPSGPESSKDDVAS 429 PA R P AS + K EP +AP PVV + W P P+ + K A+ Sbjct: 134 PARRKEPAASRKEPKKEEPKAKAPEPVV-----DLLAWDDEPAPASTSAGKQPAAA 184
>Os03g0789000:Os03g0789000 | Length = 576 Score = 30.0 bits (66), Expect = 3.6 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Frame = +1 Query: 247 QPSDRRPAARGNPRASSQTKSTEPDLQAPNPVVTPPLANGWQWASRPR-PSGPESSKDDV 423 +P+D P A P S+ P QAP PV PP + +SR PS P S+ + Sbjct: 26 RPADAAPPALPPP-------SSAPSDQAPEPVTIPPSEHSSHHSSRSTDPSTPTSAAEQP 78 Query: 424 AS 429 A+ Sbjct: 79 AN 80
>Os11g0598900:Os11g0598900 | Length = 978 Score = 29.3 bits (64), Expect = 6.2 Identities = 18/59 (30%), Positives = 27/59 (45%) Frame = +1 Query: 556 NKWFKSFFEVIDTLSVDQIHEHTRQWHCPACKNGPGAIDWFKGLQSLVTHARTKGSKRV 732 NK +S F + D L + H R W CP C +G + SL++H +K + V Sbjct: 373 NKVDRSSFTMSDVLRFGEKHNSYRFWVCPLCGSGSSS-KKHTDTVSLLSHMCSKHQRAV 430
>AK110145:Os09g0535200 | Length = 861 Score = 29.3 bits (64), Expect = 6.2 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 2/74 (2%) Frame = +1 Query: 154 PWGSSSNAPPTTARQAWXXXXXXXXXXXXWAQPSDRRPAARGNPRASSQTKSTEPDLQAP 333 P SS+ APP A + W + S A R + A + P L+AP Sbjct: 591 PRASSAPAPPVAAPRGWTVSPTTARYSFSDSGASSSSAAPRAS-TAPLALHAPAPHLRAP 649 Query: 334 NPVVTPPLA--NGW 369 PV TPP A GW Sbjct: 650 -PVATPPPAAPRGW 662
>AY341852:Os03g0758900 | Length = 1002 Score = 28.9 bits (63), Expect = 8.1 Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 18/87 (20%) Frame = +1 Query: 241 WAQPSDRRPAARG---NPRASSQTKSTEPDLQAPNPVVTPPLANGW-------------- 369 WA D A G P+ S + P Q P +V+PPLA G Sbjct: 634 WAVEEDVAAAPPGISLAPQFSMANYAPPPSYQHPATLVSPPLAAGLHPYPPYLHGVDAPP 693 Query: 370 -QWASRPRPSGPESSKDDVASSGLDSE 447 QW RP P P S D+A++ E Sbjct: 694 PQWPPRPAPP-PSFSVLDLAAAAAPHE 719
>AY341848:Os03g0758900 | Length = 451 Score = 28.9 bits (63), Expect = 8.1 Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 18/87 (20%) Frame = +1 Query: 241 WAQPSDRRPAARG---NPRASSQTKSTEPDLQAPNPVVTPPLANGW-------------- 369 WA D A G P+ S + P Q P +V+PPLA G Sbjct: 83 WAVEEDVAAAPPGISLAPQFSMANYAPPPSYQHPATLVSPPLAAGLHPYPPYLHGVDAPP 142 Query: 370 -QWASRPRPSGPESSKDDVASSGLDSE 447 QW RP P P S D+A++ E Sbjct: 143 PQWPPRPAPP-PSFSVLDLAAAAAPHE 168 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 35,640,312 Number of extensions: 801481 Number of successful extensions: 2540 Number of sequences better than 10.0: 15 Number of HSP's gapped: 2521 Number of HSP's successfully gapped: 17 Length of query: 421 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 318 Effective length of database: 11,275,632 Effective search space: 3585650976 Effective search space used: 3585650976 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
