| Clone Name | FLbaf43b06 |
|---|---|
| Clone Library Name | barley_pub |
>P08045:XFIN_XENLA Zinc finger protein Xfin - Xenopus laevis (African clawed frog)| Length = 1350 Score = 34.7 bits (78), Expect = 0.86 Identities = 20/58 (34%), Positives = 26/58 (44%) Frame = +1 Query: 556 NKWFKSFFEVIDTLSVDQIHEHTRQWHCPACKNGPGAIDWFKGLQSLVTHARTKGSKR 729 N+ KSFF+ D + + H R +HCP C G F LV H RT +R Sbjct: 781 NECDKSFFQTSDLVKHLRTHTGERPYHCPECNKG------FIQNSDLVKHQRTHTGER 832
>Q5YCW1:TAU_PANTR Microtubule-associated protein tau - Pan troglodytes (Chimpanzee)| Length = 776 Score = 32.7 bits (73), Expect = 3.3 Identities = 19/65 (29%), Positives = 27/65 (41%) Frame = +1 Query: 265 PAARGNPRASSQTKSTEPDLQAPNPVVTPPLANGWQWASRPRPSGPESSKDDVASSGLDS 444 P P Q +T + P TPP + Q RP P+GP S + + SG S Sbjct: 471 PRGAAPPGQKGQANATRIPAKTPPAPKTPPSSATKQVQRRPPPAGPRSERGEPPKSGDRS 530 Query: 445 EANNP 459 ++P Sbjct: 531 GYSSP 535
>Q5YCV9:TAU_HYLLA Microtubule-associated protein tau - Hylobates lar (Common gibbon)| Length = 776 Score = 32.7 bits (73), Expect = 3.3 Identities = 19/65 (29%), Positives = 28/65 (43%) Frame = +1 Query: 265 PAARGNPRASSQTKSTEPDLQAPNPVVTPPLANGWQWASRPRPSGPESSKDDVASSGLDS 444 P P Q +T + P TPP + Q RP P+GP+S + + SG S Sbjct: 471 PRGAAPPGQKGQANATRIPAKTPPAPKTPPSSVTKQVQRRPPPAGPKSERGEPPKSGDRS 530 Query: 445 EANNP 459 ++P Sbjct: 531 GYSSP 535
>Q5YCW0:TAU_GORGO Microtubule-associated protein tau - Gorilla gorilla gorilla| (Lowland gorilla) Length = 776 Score = 32.7 bits (73), Expect = 3.3 Identities = 19/65 (29%), Positives = 27/65 (41%) Frame = +1 Query: 265 PAARGNPRASSQTKSTEPDLQAPNPVVTPPLANGWQWASRPRPSGPESSKDDVASSGLDS 444 P P Q +T + P TPP + Q RP P+GP S + + SG S Sbjct: 471 PRGAAPPGQKGQANATRIPAKTPPAPKTPPSSATKQVQRRPPPAGPRSERGEPPKSGDRS 530 Query: 445 EANNP 459 ++P Sbjct: 531 GYSSP 535
>Q28139:NCKX1_BOVIN Sodium/potassium/calcium exchanger 1 - Bos taurus (Bovine)| Length = 1216 Score = 32.3 bits (72), Expect = 4.3 Identities = 18/64 (28%), Positives = 28/64 (43%) Frame = +1 Query: 265 PAARGNPRASSQTKSTEPDLQAPNPVVTPPLANGWQWASRPRPSGPESSKDDVASSGLDS 444 P A+ P+A +++K E + P VTP P P ++D S G+ + Sbjct: 692 PEAKATPQAKAESKPEEEPAKLPEVTVTP----------APAPDVKGDQEEDPGSQGVGA 741 Query: 445 EANN 456 EA N Sbjct: 742 EAEN 745
>P51825:AFF1_HUMAN AF4/FMR2 family member 1 - Homo sapiens (Human)| Length = 1210 Score = 32.3 bits (72), Expect = 4.3 Identities = 30/117 (25%), Positives = 43/117 (36%), Gaps = 19/117 (16%) Frame = +1 Query: 166 SSNAPPTTARQAWXXXXXXXXXXXXWAQPSDRRPAARGNPRASSQTKSTEPDLQAPNPVV 345 SS+APP+ + SD ++ +SS L+ P P Sbjct: 446 SSSAPPSAPQSLPEPVASAHSSSAESESTSDSDSSSDSESESSSSDSEENEPLETPAPEP 505 Query: 346 TPPLANGWQ---W---ASRPR--PSGPESSK-----------DDVASSGLDSEANNP 459 PP N WQ W S+P P GP S++ D A+S SE+ +P Sbjct: 506 EPPTTNKWQLDNWLTKVSQPAAPPEGPRSTEPPRRHPESKGSSDSATSQEHSESKDP 562
>Q10475:IF4G_SCHPO Eukaryotic translation initiation factor 4 gamma -| Schizosaccharomyces pombe (Fission yeast) Length = 1403 Score = 31.2 bits (69), Expect = 9.5 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Frame = +1 Query: 268 AARGNPRASSQTKSTEPDLQAPNPVVTPPLANGWQWASRPRPSGPESSKDDVASSGLDSE 447 ++ N S QT +TEP++ V + G +S PS SSK D+ SGL+S Sbjct: 723 SSEANVDTSKQTNATEPEVVDKTKVEKLKASEGKSTSSLSSPSHSTSSKRDLL-SGLESL 781 Query: 448 A--NNPEAE 468 + NP++E Sbjct: 782 SLKTNPKSE 790
>O19025:ADA2B_MACPR Alpha-2B adrenergic receptor - Macroscelides proboscideus| (Short-eared elephant shrew) Length = 387 Score = 31.2 bits (69), Expect = 9.5 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Frame = +1 Query: 253 SDRRPAARGNPRASS----QTKSTEPDLQAPNPVVTPPLANGWQWASRPRPSGPESSKDD 420 S R+P A+G PR Q + + A P +T PLA + +P+G + +D Sbjct: 191 SRRKPRAKGXPREGESKQPQLRPVGTSVSARPPALTSPLAVTGEANGHSKPTGERETPED 250 Query: 421 VAS 429 + S Sbjct: 251 LVS 253 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 215,926,497 Number of extensions: 4678445 Number of successful extensions: 11721 Number of sequences better than 10.0: 8 Number of HSP's gapped: 11697 Number of HSP's successfully gapped: 8 Length of query: 421 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 305 Effective length of database: 68,868,219 Effective search space: 21004806795 Effective search space used: 21004806795 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)