| Clone Name | FLbaf45p11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001056988.1| Oryza sativa (japonica cultivar-group) Os03g0439500 (Os03g0439500) mRNA, partial cds Length = 2434 Score = 137 bits (69), Expect = 1e-28 Identities = 114/129 (88%) Strand = Plus / Plus Query: 710 actaccctccgtgccgccacccggacaaggtgatcggcatcacgccgcaccacgacggcc 769 |||||||||| ||||||||||| ||||||||||||||||||||||||||| ||| || | Sbjct: 1690 actaccctccttgccgccacccagacaaggtgatcggcatcacgccgcactccgatggtc 1749 Query: 770 tcggcctgacgctgctgctgcacgtggacgacacccccggcctgcaggtgaggaaaaacg 829 |||||||||||||||||||||| | |||||||| |||||||||||| | ||||| | | Sbjct: 1750 tcggcctgacgctgctgctgcagctcgacgacacgcccggcctgcagatcaggaaggatg 1809 Query: 830 gcaggtggt 838 ||||||||| Sbjct: 1810 gcaggtggt 1818 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 869 tcatcaacgtcggcgacattctccagatcctcaccaatggcacgtacaagagcgccgagc 928 ||||||| |||| |||||| ||| || |||| ||||||||| |||||||||||| ||||| Sbjct: 1849 tcatcaatgtcgccgacatactcgaggtccttaccaatggcgcgtacaagagcgtcgagc 1908 Query: 929 acag 932 |||| Sbjct: 1909 acag 1912 Score = 60.0 bits (30), Expect = 2e-05 Identities = 105/130 (80%) Strand = Plus / Plus Query: 216 ctacgagctgccggttgtagacatggccaggctgcttgacccggagttctcggacgccga 275 ||||||||||||||| || ||||||| | |||||||||||||||| | |||| || || Sbjct: 1199 ctacgagctgccggtggtggacatggagaagctgcttgacccggagcttgcggaggcaga 1258 Query: 276 gaccgccaggcttggctccgcgtgccgagactggggcttcttccagttaacaaaccacgg 335 || || | |||||| || || || | ||| ||||| ||||| |||||| |||||| || Sbjct: 1259 gattgcaaagcttggttctgcatgtcaagattggggtttctttcagttagtaaaccatgg 1318 Query: 336 agtcgacgaa 345 |||||||||| Sbjct: 1319 agtcgacgaa 1328
>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete sequence Length = 159579 Score = 137 bits (69), Expect = 1e-28 Identities = 114/129 (88%) Strand = Plus / Plus Query: 710 actaccctccgtgccgccacccggacaaggtgatcggcatcacgccgcaccacgacggcc 769 |||||||||| ||||||||||| ||||||||||||||||||||||||||| ||| || | Sbjct: 150181 actaccctccttgccgccacccagacaaggtgatcggcatcacgccgcactccgatggtc 150240 Query: 770 tcggcctgacgctgctgctgcacgtggacgacacccccggcctgcaggtgaggaaaaacg 829 |||||||||||||||||||||| | |||||||| |||||||||||| | ||||| | | Sbjct: 150241 tcggcctgacgctgctgctgcagctcgacgacacgcccggcctgcagatcaggaaggatg 150300 Query: 830 gcaggtggt 838 ||||||||| Sbjct: 150301 gcaggtggt 150309 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 869 tcatcaacgtcggcgacattctccagatcctcaccaatggcacgtacaagagcgccgagc 928 ||||||| |||| |||||| ||| || |||| ||||||||| |||||||||||| ||||| Sbjct: 150340 tcatcaatgtcgccgacatactcgaggtccttaccaatggcgcgtacaagagcgtcgagc 150399 Query: 929 acag 932 |||| Sbjct: 150400 acag 150403 Score = 52.0 bits (26), Expect = 0.005 Identities = 41/46 (89%) Strand = Plus / Plus Query: 216 ctacgagctgccggttgtagacatggccaggctgcttgacccggag 261 ||||||||||||||| || ||||||| | |||||||||||||||| Sbjct: 149337 ctacgagctgccggtggtggacatggagaagctgcttgacccggag 149382
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 137 bits (69), Expect = 1e-28 Identities = 114/129 (88%) Strand = Plus / Plus Query: 710 actaccctccgtgccgccacccggacaaggtgatcggcatcacgccgcaccacgacggcc 769 |||||||||| ||||||||||| ||||||||||||||||||||||||||| ||| || | Sbjct: 18377791 actaccctccttgccgccacccagacaaggtgatcggcatcacgccgcactccgatggtc 18377850 Query: 770 tcggcctgacgctgctgctgcacgtggacgacacccccggcctgcaggtgaggaaaaacg 829 |||||||||||||||||||||| | |||||||| |||||||||||| | ||||| | | Sbjct: 18377851 tcggcctgacgctgctgctgcagctcgacgacacgcccggcctgcagatcaggaaggatg 18377910 Query: 830 gcaggtggt 838 ||||||||| Sbjct: 18377911 gcaggtggt 18377919 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 869 tcatcaacgtcggcgacattctccagatcctcaccaatggcacgtacaagagcgccgagc 928 ||||||| |||| |||||| ||| || |||| ||||||||| |||||||||||| ||||| Sbjct: 18377950 tcatcaatgtcgccgacatactcgaggtccttaccaatggcgcgtacaagagcgtcgagc 18378009 Query: 929 acag 932 |||| Sbjct: 18378010 acag 18378013 Score = 52.0 bits (26), Expect = 0.005 Identities = 41/46 (89%) Strand = Plus / Plus Query: 216 ctacgagctgccggttgtagacatggccaggctgcttgacccggag 261 ||||||||||||||| || ||||||| | |||||||||||||||| Sbjct: 18376947 ctacgagctgccggtggtggacatggagaagctgcttgacccggag 18376992
>dbj|AK119216.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-E12, full insert sequence Length = 1478 Score = 137 bits (69), Expect = 1e-28 Identities = 114/129 (88%) Strand = Plus / Plus Query: 710 actaccctccgtgccgccacccggacaaggtgatcggcatcacgccgcaccacgacggcc 769 |||||||||| ||||||||||| ||||||||||||||||||||||||||| ||| || | Sbjct: 734 actaccctccttgccgccacccagacaaggtgatcggcatcacgccgcactccgatggtc 793 Query: 770 tcggcctgacgctgctgctgcacgtggacgacacccccggcctgcaggtgaggaaaaacg 829 |||||||||||||||||||||| | |||||||| |||||||||||| | ||||| | | Sbjct: 794 tcggcctgacgctgctgctgcagctcgacgacacgcccggcctgcagatcaggaaggatg 853 Query: 830 gcaggtggt 838 ||||||||| Sbjct: 854 gcaggtggt 862 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 869 tcatcaacgtcggcgacattctccagatcctcaccaatggcacgtacaagagcgccgagc 928 ||||||| |||| |||||| ||| || |||| ||||||||| |||||||||||| ||||| Sbjct: 893 tcatcaatgtcgccgacatactcgaggtccttaccaatggcgcgtacaagagcgtcgagc 952 Query: 929 acag 932 |||| Sbjct: 953 acag 956 Score = 60.0 bits (30), Expect = 2e-05 Identities = 105/130 (80%) Strand = Plus / Plus Query: 216 ctacgagctgccggttgtagacatggccaggctgcttgacccggagttctcggacgccga 275 ||||||||||||||| || ||||||| | |||||||||||||||| | |||| || || Sbjct: 243 ctacgagctgccggtggtggacatggagaagctgcttgacccggagcttgcggaggcaga 302 Query: 276 gaccgccaggcttggctccgcgtgccgagactggggcttcttccagttaacaaaccacgg 335 || || | |||||| || || || | ||| ||||| ||||| |||||| |||||| || Sbjct: 303 gattgcaaagcttggttctgcatgtcaagattggggtttctttcagttagtaaaccatgg 362 Query: 336 agtcgacgaa 345 |||||||||| Sbjct: 363 agtcgacgaa 372
>dbj|AK104779.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C04, full insert sequence Length = 1085 Score = 137 bits (69), Expect = 1e-28 Identities = 114/129 (88%) Strand = Plus / Plus Query: 710 actaccctccgtgccgccacccggacaaggtgatcggcatcacgccgcaccacgacggcc 769 |||||||||| ||||||||||| ||||||||||||||||||||||||||| ||| || | Sbjct: 315 actaccctccttgccgccacccagacaaggtgatcggcatcacgccgcactccgatggtc 374 Query: 770 tcggcctgacgctgctgctgcacgtggacgacacccccggcctgcaggtgaggaaaaacg 829 |||||||||||||||||||||| | |||||||| |||||||||||| | ||||| | | Sbjct: 375 tcggcctgacgctgctgctgcagctcgacgacacgcccggcctgcagatcaggaaggatg 434 Query: 830 gcaggtggt 838 ||||||||| Sbjct: 435 gcaggtggt 443 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 869 tcatcaacgtcggcgacattctccagatcctcaccaatggcacgtacaagagcgccgagc 928 ||||||| |||| |||||| ||| || |||| ||||||||| |||||||||||| ||||| Sbjct: 474 tcatcaatgtcgccgacatactcgaggtccttaccaatggcgcgtacaagagcgtcgagc 533 Query: 929 acag 932 |||| Sbjct: 534 acag 537
>dbj|AK067647.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111O20, full insert sequence Length = 1505 Score = 137 bits (69), Expect = 1e-28 Identities = 114/129 (88%) Strand = Plus / Plus Query: 710 actaccctccgtgccgccacccggacaaggtgatcggcatcacgccgcaccacgacggcc 769 |||||||||| ||||||||||| ||||||||||||||||||||||||||| ||| || | Sbjct: 758 actaccctccttgccgccacccagacaaggtgatcggcatcacgccgcactccgatggtc 817 Query: 770 tcggcctgacgctgctgctgcacgtggacgacacccccggcctgcaggtgaggaaaaacg 829 |||||||||||||||||||||| | |||||||| |||||||||||| | ||||| | | Sbjct: 818 tcggcctgacgctgctgctgcagctcgacgacacgcccggcctgcagatcaggaaggatg 877 Query: 830 gcaggtggt 838 ||||||||| Sbjct: 878 gcaggtggt 886 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 869 tcatcaacgtcggcgacattctccagatcctcaccaatggcacgtacaagagcgccgagc 928 ||||||| |||| |||||| ||| || |||| ||||||||| |||||||||||| ||||| Sbjct: 917 tcatcaatgtcgccgacatactcgaggtccttaccaatggcgcgtacaagagcgtcgagc 976 Query: 929 acag 932 |||| Sbjct: 977 acag 980 Score = 60.0 bits (30), Expect = 2e-05 Identities = 105/130 (80%) Strand = Plus / Plus Query: 216 ctacgagctgccggttgtagacatggccaggctgcttgacccggagttctcggacgccga 275 ||||||||||||||| || ||||||| | |||||||||||||||| | |||| || || Sbjct: 267 ctacgagctgccggtggtggacatggagaagctgcttgacccggagcttgcggaggcaga 326 Query: 276 gaccgccaggcttggctccgcgtgccgagactggggcttcttccagttaacaaaccacgg 335 || || | |||||| || || || | ||| ||||| ||||| |||||| |||||| || Sbjct: 327 gattgcaaagcttggttctgcatgtcaagattggggtttctttcagttagtaaaccatgg 386 Query: 336 agtcgacgaa 345 |||||||||| Sbjct: 387 agtcgacgaa 396
>dbj|AK067507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109I01, full insert sequence Length = 2436 Score = 137 bits (69), Expect = 1e-28 Identities = 114/129 (88%) Strand = Plus / Plus Query: 710 actaccctccgtgccgccacccggacaaggtgatcggcatcacgccgcaccacgacggcc 769 |||||||||| ||||||||||| ||||||||||||||||||||||||||| ||| || | Sbjct: 1692 actaccctccttgccgccacccagacaaggtgatcggcatcacgccgcactccgatggtc 1751 Query: 770 tcggcctgacgctgctgctgcacgtggacgacacccccggcctgcaggtgaggaaaaacg 829 |||||||||||||||||||||| | |||||||| |||||||||||| | ||||| | | Sbjct: 1752 tcggcctgacgctgctgctgcagctcgacgacacgcccggcctgcagatcaggaaggatg 1811 Query: 830 gcaggtggt 838 ||||||||| Sbjct: 1812 gcaggtggt 1820 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 869 tcatcaacgtcggcgacattctccagatcctcaccaatggcacgtacaagagcgccgagc 928 ||||||| |||| |||||| ||| || |||| ||||||||| |||||||||||| ||||| Sbjct: 1851 tcatcaatgtcgccgacatactcgaggtccttaccaatggcgcgtacaagagcgtcgagc 1910 Query: 929 acag 932 |||| Sbjct: 1911 acag 1914 Score = 60.0 bits (30), Expect = 2e-05 Identities = 105/130 (80%) Strand = Plus / Plus Query: 216 ctacgagctgccggttgtagacatggccaggctgcttgacccggagttctcggacgccga 275 ||||||||||||||| || ||||||| | |||||||||||||||| | |||| || || Sbjct: 1201 ctacgagctgccggtggtggacatggagaagctgcttgacccggagcttgcggaggcaga 1260 Query: 276 gaccgccaggcttggctccgcgtgccgagactggggcttcttccagttaacaaaccacgg 335 || || | |||||| || || || | ||| ||||| ||||| |||||| |||||| || Sbjct: 1261 gattgctaagcttggttctgcatgtcaagattggggtttctttcagttagtaaaccatgg 1320 Query: 336 agtcgacgaa 345 |||||||||| Sbjct: 1321 agtcgacgaa 1330
>dbj|AK060946.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-F02, full insert sequence Length = 1085 Score = 137 bits (69), Expect = 1e-28 Identities = 114/129 (88%) Strand = Plus / Plus Query: 710 actaccctccgtgccgccacccggacaaggtgatcggcatcacgccgcaccacgacggcc 769 |||||||||| ||||||||||| ||||||||||||||||||||||||||| ||| || | Sbjct: 315 actaccctccttgccgccacccagacaaggtgatcggcatcacgccgcactccgatggtc 374 Query: 770 tcggcctgacgctgctgctgcacgtggacgacacccccggcctgcaggtgaggaaaaacg 829 |||||||||||||||||||||| | |||||||| |||||||||||| | ||||| | | Sbjct: 375 tcggcctgacgctgctgctgcagctcgacgacacgcccggcctgcagatcaggaaggatg 434 Query: 830 gcaggtggt 838 ||||||||| Sbjct: 435 gcaggtggt 443 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 869 tcatcaacgtcggcgacattctccagatcctcaccaatggcacgtacaagagcgccgagc 928 ||||||| |||| |||||| ||| || |||| ||||||||| |||||||||||| ||||| Sbjct: 474 tcatcaatgtcgccgacatactcgaggtccttaccaatggcgcgtacaagagcgtcgagc 533 Query: 929 acag 932 |||| Sbjct: 534 acag 537
>gb|AY110951.1| Zea mays CL945_1 mRNA sequence Length = 1121 Score = 115 bits (58), Expect = 4e-22 Identities = 157/190 (82%) Strand = Plus / Plus Query: 627 gttcatggcgagcgacctcggagttgagcaggaggcgctcatggaaaccttccagggcaa 686 |||||||||| ||||||||| || |||| ||||||||| ||| ||||| ||| || Sbjct: 113 gttcatggcggccgacctcggggtggagccggaggcgctgcaggacgccttcacggggaa 172 Query: 687 gaggcagagtgttgccttccactactaccctccgtgccgccacccggacaaggtgatcgg 746 | ||||||| | || ||||| ||||||| || |||||||| | ||| |||||||| || Sbjct: 173 gcggcagagcatggcggtccaccactacccgccctgccgccagcgggagaaggtgatggg 232 Query: 747 catcacgccgcaccacgacggcctcggcctgacgctgctgctgcacgtggacgacacccc 806 ||||||||||||| ||||| || ||||| |||||||||||||||||||||||||| || Sbjct: 233 catcacgccgcacacggacgggctgggcctcacgctgctgctgcacgtggacgacacgcc 292 Query: 807 cggcctgcag 816 |||||||||| Sbjct: 293 cggcctgcag 302
>ref|NM_001069497.1| Oryza sativa (japonica cultivar-group) Os09g0354100 (Os09g0354100) mRNA, complete cds Length = 849 Score = 111 bits (56), Expect = 6e-21 Identities = 164/200 (82%) Strand = Plus / Plus Query: 710 actaccctccgtgccgccacccggacaaggtgatcggcatcacgccgcaccacgacggcc 769 |||||||||| |||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 431 actaccctccttgccgccacccggagaaggtgatcggcatcgcgccgcactccgacggct 490 Query: 770 tcggcctgacgctgctgctgcacgtggacgacacccccggcctgcaggtgaggaaaaacg 829 |||| ||||| || |||||||| || || ||||| || ||||||||||| || || || Sbjct: 491 tcgggctgactctactgctgcaagtcgatgacacgccgggcctgcaggttagcaacggcg 550 Query: 830 gcaggtggtacccgctgaacccgctgccaggcgccctcgtcatcaacgtcggcgacattc 889 || ||||| | ||| || ||||||||||| ||| || |||||||| ||||||| | | Sbjct: 551 gccggtggcatccggtgcggccgctgccaggtgccttcatcatcaacatcggcgagaccc 610 Query: 890 tccagatcctcaccaatggc 909 || || | |||||||||||| Sbjct: 611 tcgaggttctcaccaatggc 630 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Plus Query: 202 ggcgacgacgagagctacgagctgccggttgtagacatggccaggctgct 251 ||||||||||||||| |||| ||||||| || |||||||| |||||||| Sbjct: 91 ggcgacgacgagagcagcgaggtgccggtggtcgacatggcgaggctgct 140
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 111 bits (56), Expect = 6e-21 Identities = 164/200 (82%) Strand = Plus / Plus Query: 710 actaccctccgtgccgccacccggacaaggtgatcggcatcacgccgcaccacgacggcc 769 |||||||||| |||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 11269720 actaccctccttgccgccacccggagaaggtgatcggcatcgcgccgcactccgacggct 11269779 Query: 770 tcggcctgacgctgctgctgcacgtggacgacacccccggcctgcaggtgaggaaaaacg 829 |||| ||||| || |||||||| || || ||||| || ||||||||||| || || || Sbjct: 11269780 tcgggctgactctactgctgcaagtcgatgacacgccgggcctgcaggttagcaacggcg 11269839 Query: 830 gcaggtggtacccgctgaacccgctgccaggcgccctcgtcatcaacgtcggcgacattc 889 || ||||| | ||| || ||||||||||| ||| || |||||||| ||||||| | | Sbjct: 11269840 gccggtggcatccggtgcggccgctgccaggtgccttcatcatcaacatcggcgagaccc 11269899 Query: 890 tccagatcctcaccaatggc 909 || || | |||||||||||| Sbjct: 11269900 tcgaggttctcaccaatggc 11269919 Score = 87.7 bits (44), Expect = 9e-14 Identities = 170/212 (80%) Strand = Plus / Minus Query: 711 ctaccctccgtgccgccacccggacaaggtgatcggcatcacgccgcaccacgacggcct 770 ||||||||| |||||||| ||||| |||||||| ||||| |||||||| ||||||| | Sbjct: 11295868 ctaccctccttgccgccatccggagaaggtgatgggcattgcgccgcactccgacggctt 11295809 Query: 771 cggcctgacgctgctgctgcacgtggacgacacccccggcctgcaggtgaggaaaaacgg 830 ||| ||||||||| ||||||| || | ||||| || ||||||||||| || || |||| Sbjct: 11295808 cgggctgacgctgttgctgcaagtcaatgacacgccgggcctgcaggttagcaaggacgg 11295749 Query: 831 caggtggtacccgctgaacccgctgccaggcgccctcgtcatcaacgtcggcgacattct 890 | ||||| || || |||||||| || ||| ||||||| ||||||||||| || || Sbjct: 11295748 ccggtggcgacctgtgcggccgctgccgggtgccttcgtcattaacgtcggcgagatcct 11295689 Query: 891 ccagatcctcaccaatggcacgtacaagagcg 922 | || | |||||||||||| |||||||||| Sbjct: 11295688 cgaggttctcaccaatggctactacaagagcg 11295657 Score = 83.8 bits (42), Expect = 1e-12 Identities = 69/78 (88%) Strand = Plus / Plus Query: 711 ctaccctccgtgccgccacccggacaaggtgatcggcatcacgccgcaccacgacggcct 770 ||||||||| |||||||||||||| ||||||||||||||| |||||||| ||||||| | Sbjct: 11257458 ctaccctccctgccgccacccggagaaggtgatcggcatctcgccgcactccgacggctt 11257517 Query: 771 cggcctgacgctgctgct 788 ||| || || |||||||| Sbjct: 11257518 cgggctaactctgctgct 11257535 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Minus Query: 204 cgacgacgagagctacgagctgccggttgtagacatggccaggctgct 251 ||||||||||||| |||||||||||| ||||||||||| |||||||| Sbjct: 11297056 cgacgacgagagcctcgagctgccggtggtagacatggcgaggctgct 11297009 Score = 60.0 bits (30), Expect = 2e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 204 cgacgacgagagctacgagctgccggttgtagacatggccaggctgcttgaccc 257 ||||||||||||||| || |||||||| || |||||||| |||||||| ||||| Sbjct: 11236063 cgacgacgagagctatgacctgccggtggtggacatggcgaggctgctcgaccc 11236116 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 726 ccacccggacaaggtgatcggcatcacgccgcaccacgacggcctcggcctgacgctg 783 ||||||||| ||||||||||||||| |||||||| |||||| |||| ||||||||| Sbjct: 11238209 ccacccggagaaggtgatcggcatcgcgccgcactctgacggcttcggactgacgctg 11238266 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Plus Query: 202 ggcgacgacgagagctacgagctgccggttgtagacatggccaggctgct 251 ||||||||||||||| |||| ||||||| || |||||||| |||||||| Sbjct: 11267534 ggcgacgacgagagcagcgaggtgccggtggtcgacatggcgaggctgct 11267583
>dbj|AP005689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042H24 Length = 186313 Score = 111 bits (56), Expect = 6e-21 Identities = 164/200 (82%) Strand = Plus / Plus Query: 710 actaccctccgtgccgccacccggacaaggtgatcggcatcacgccgcaccacgacggcc 769 |||||||||| |||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 104892 actaccctccttgccgccacccggagaaggtgatcggcatcgcgccgcactccgacggct 104951 Query: 770 tcggcctgacgctgctgctgcacgtggacgacacccccggcctgcaggtgaggaaaaacg 829 |||| ||||| || |||||||| || || ||||| || ||||||||||| || || || Sbjct: 104952 tcgggctgactctactgctgcaagtcgatgacacgccgggcctgcaggttagcaacggcg 105011 Query: 830 gcaggtggtacccgctgaacccgctgccaggcgccctcgtcatcaacgtcggcgacattc 889 || ||||| | ||| || ||||||||||| ||| || |||||||| ||||||| | | Sbjct: 105012 gccggtggcatccggtgcggccgctgccaggtgccttcatcatcaacatcggcgagaccc 105071 Query: 890 tccagatcctcaccaatggc 909 || || | |||||||||||| Sbjct: 105072 tcgaggttctcaccaatggc 105091 Score = 87.7 bits (44), Expect = 9e-14 Identities = 170/212 (80%) Strand = Plus / Minus Query: 711 ctaccctccgtgccgccacccggacaaggtgatcggcatcacgccgcaccacgacggcct 770 ||||||||| |||||||| ||||| |||||||| ||||| |||||||| ||||||| | Sbjct: 131040 ctaccctccttgccgccatccggagaaggtgatgggcattgcgccgcactccgacggctt 130981 Query: 771 cggcctgacgctgctgctgcacgtggacgacacccccggcctgcaggtgaggaaaaacgg 830 ||| ||||||||| ||||||| || | ||||| || ||||||||||| || || |||| Sbjct: 130980 cgggctgacgctgttgctgcaagtcaatgacacgccgggcctgcaggttagcaaggacgg 130921 Query: 831 caggtggtacccgctgaacccgctgccaggcgccctcgtcatcaacgtcggcgacattct 890 | ||||| || || |||||||| || ||| ||||||| ||||||||||| || || Sbjct: 130920 ccggtggcgacctgtgcggccgctgccgggtgccttcgtcattaacgtcggcgagatcct 130861 Query: 891 ccagatcctcaccaatggcacgtacaagagcg 922 | || | |||||||||||| |||||||||| Sbjct: 130860 cgaggttctcaccaatggctactacaagagcg 130829 Score = 83.8 bits (42), Expect = 1e-12 Identities = 69/78 (88%) Strand = Plus / Plus Query: 711 ctaccctccgtgccgccacccggacaaggtgatcggcatcacgccgcaccacgacggcct 770 ||||||||| |||||||||||||| ||||||||||||||| |||||||| ||||||| | Sbjct: 92630 ctaccctccctgccgccacccggagaaggtgatcggcatctcgccgcactccgacggctt 92689 Query: 771 cggcctgacgctgctgct 788 ||| || || |||||||| Sbjct: 92690 cgggctaactctgctgct 92707 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Minus Query: 204 cgacgacgagagctacgagctgccggttgtagacatggccaggctgct 251 ||||||||||||| |||||||||||| ||||||||||| |||||||| Sbjct: 132228 cgacgacgagagcctcgagctgccggtggtagacatggcgaggctgct 132181 Score = 60.0 bits (30), Expect = 2e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 204 cgacgacgagagctacgagctgccggttgtagacatggccaggctgcttgaccc 257 ||||||||||||||| || |||||||| || |||||||| |||||||| ||||| Sbjct: 71235 cgacgacgagagctatgacctgccggtggtggacatggcgaggctgctcgaccc 71288 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 726 ccacccggacaaggtgatcggcatcacgccgcaccacgacggcctcggcctgacgctg 783 ||||||||| ||||||||||||||| |||||||| |||||| |||| ||||||||| Sbjct: 73381 ccacccggagaaggtgatcggcatcgcgccgcactctgacggcttcggactgacgctg 73438 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Plus Query: 202 ggcgacgacgagagctacgagctgccggttgtagacatggccaggctgct 251 ||||||||||||||| |||| ||||||| || |||||||| |||||||| Sbjct: 102706 ggcgacgacgagagcagcgaggtgccggtggtcgacatggcgaggctgct 102755
>ref|NM_001069498.1| Oryza sativa (japonica cultivar-group) Os09g0354300 (Os09g0354300) mRNA, complete cds Length = 711 Score = 87.7 bits (44), Expect = 9e-14 Identities = 170/212 (80%) Strand = Plus / Plus Query: 711 ctaccctccgtgccgccacccggacaaggtgatcggcatcacgccgcaccacgacggcct 770 ||||||||| |||||||| ||||| |||||||| ||||| |||||||| ||||||| | Sbjct: 294 ctaccctccttgccgccatccggagaaggtgatgggcattgcgccgcactccgacggctt 353 Query: 771 cggcctgacgctgctgctgcacgtggacgacacccccggcctgcaggtgaggaaaaacgg 830 ||| ||||||||| ||||||| || | ||||| || ||||||||||| || || |||| Sbjct: 354 cgggctgacgctgttgctgcaagtcaatgacacgccgggcctgcaggttagcaaggacgg 413 Query: 831 caggtggtacccgctgaacccgctgccaggcgccctcgtcatcaacgtcggcgacattct 890 | ||||| || || |||||||| || ||| ||||||| ||||||||||| || || Sbjct: 414 ccggtggcgacctgtgcggccgctgccgggtgccttcgtcattaacgtcggcgagatcct 473 Query: 891 ccagatcctcaccaatggcacgtacaagagcg 922 | || | |||||||||||| |||||||||| Sbjct: 474 cgaggttctcaccaatggctactacaagagcg 505 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 204 cgacgacgagagctacgagctgccggttgtagacatggccaggctgct 251 ||||||||||||| |||||||||||| ||||||||||| |||||||| Sbjct: 87 cgacgacgagagcctcgagctgccggtggtagacatggcgaggctgct 134
>ref|NM_001069496.1| Oryza sativa (japonica cultivar-group) Os09g0353700 (Os09g0353700) mRNA, complete cds Length = 828 Score = 83.8 bits (42), Expect = 1e-12 Identities = 69/78 (88%) Strand = Plus / Plus Query: 711 ctaccctccgtgccgccacccggacaaggtgatcggcatcacgccgcaccacgacggcct 770 ||||||||| |||||||||||||| ||||||||||||||| |||||||| ||||||| | Sbjct: 420 ctaccctccctgccgccacccggagaaggtgatcggcatctcgccgcactccgacggctt 479 Query: 771 cggcctgacgctgctgct 788 ||| || || |||||||| Sbjct: 480 cgggctaactctgctgct 497
>ref|NM_001051854.1| Oryza sativa (japonica cultivar-group) Os01g0935400 (Os01g0935400) mRNA, complete cds Length = 1101 Score = 71.9 bits (36), Expect = 5e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 859 ggcgccctcgtcatcaacgtcggcgacattctccagatcctcaccaatggcacgtacaag 918 |||||||||||| ||||||||||||||| ||| || | ||||||||||||| ||||||| Sbjct: 823 ggcgccctcgtcgtcaacgtcggcgacacgctcgaggtgctcaccaatggcaggtacaag 882 Query: 919 agcg 922 |||| Sbjct: 883 agcg 886
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 71.9 bits (36), Expect = 5e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 859 ggcgccctcgtcatcaacgtcggcgacattctccagatcctcaccaatggcacgtacaag 918 |||||||||||| ||||||||||||||| ||| || | ||||||||||||| ||||||| Sbjct: 41049922 ggcgccctcgtcgtcaacgtcggcgacacgctcgaggtgctcaccaatggcaggtacaag 41049863 Query: 919 agcg 922 |||| Sbjct: 41049862 agcg 41049859
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 71.9 bits (36), Expect = 5e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 859 ggcgccctcgtcatcaacgtcggcgacattctccagatcctcaccaatggcacgtacaag 918 |||||||||||| ||||||||||||||| ||| || | ||||||||||||| ||||||| Sbjct: 86852 ggcgccctcgtcgtcaacgtcggcgacacgctcgaggtgctcaccaatggcaggtacaag 86793 Query: 919 agcg 922 |||| Sbjct: 86792 agcg 86789
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 71.9 bits (36), Expect = 5e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 859 ggcgccctcgtcatcaacgtcggcgacattctccagatcctcaccaatggcacgtacaag 918 |||||||||||| ||||||||||||||| ||| || | ||||||||||||| ||||||| Sbjct: 178347 ggcgccctcgtcgtcaacgtcggcgacacgctcgaggtgctcaccaatggcaggtacaag 178288 Query: 919 agcg 922 |||| Sbjct: 178287 agcg 178284
>ref|NM_001071903.1| Oryza sativa (japonica cultivar-group) Os10g0559500 (Os10g0559500) mRNA, partial cds Length = 1216 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 862 gccctcgtcatcaacgtcggcgacattctccagatcctcaccaatggcacgtacaagag 920 ||||||||| |||| ||||||||| |||| |||||||||||||||||| ||||||||| Sbjct: 636 gccctcgtcgtcaatgtcggcgacgttcttgagatcctcaccaatggcaagtacaagag 694
>dbj|AK108419.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-H11, full insert sequence Length = 1216 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 862 gccctcgtcatcaacgtcggcgacattctccagatcctcaccaatggcacgtacaagag 920 ||||||||| |||| ||||||||| |||| |||||||||||||||||| ||||||||| Sbjct: 636 gccctcgtcgtcaatgtcggcgacgttcttgagatcctcaccaatggcaagtacaagag 694
>dbj|AK072706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138C05, full insert sequence Length = 2491 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 862 gccctcgtcatcaacgtcggcgacattctccagatcctcaccaatggcacgtacaagag 920 ||||||||| |||| ||||||||| |||| |||||||||||||||||| ||||||||| Sbjct: 816 gccctcgtcgtcaatgtcggcgacgttcttgagatcctcaccaatggcaagtacaagag 874
>ref|NM_001069495.1| Oryza sativa (japonica cultivar-group) Os09g0353400 (Os09g0353400) mRNA, complete cds Length = 882 Score = 60.0 bits (30), Expect = 2e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 204 cgacgacgagagctacgagctgccggttgtagacatggccaggctgcttgaccc 257 ||||||||||||||| || |||||||| || |||||||| |||||||| ||||| Sbjct: 87 cgacgacgagagctatgacctgccggtggtggacatggcgaggctgctcgaccc 140
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 50.1 bits (25), Expect = 0.020 Identities = 28/29 (96%) Strand = Plus / Minus Query: 892 cagatcctcaccaatggcacgtacaagag 920 ||||||||||||||||||| ||||||||| Sbjct: 21501782 cagatcctcaccaatggcaagtacaagag 21501754 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 892 cagatcctcaccaatggcacgtacaagag 920 ||||||||||| ||||||| ||||||||| Sbjct: 21495887 cagatcctcacaaatggcaagtacaagag 21495859
>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete sequence Length = 144191 Score = 50.1 bits (25), Expect = 0.020 Identities = 28/29 (96%) Strand = Plus / Plus Query: 892 cagatcctcaccaatggcacgtacaagag 920 ||||||||||||||||||| ||||||||| Sbjct: 108275 cagatcctcaccaatggcaagtacaagag 108303 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 892 cagatcctcaccaatggcacgtacaagag 920 ||||||||||| ||||||| ||||||||| Sbjct: 114170 cagatcctcacaaatggcaagtacaagag 114198
>dbj|AB189152.1| Hordeum vulgare GA3ox mRNA for gibberellin 3beta-hydroxylase, complete cds Length = 1332 Score = 48.1 bits (24), Expect = 0.078 Identities = 48/56 (85%) Strand = Plus / Plus Query: 854 tgccaggcgccctcgtcatcaacgtcggcgacattctccagatcctcaccaatggc 909 |||| |||||| | ||| |||||||||||||| | |||| ||||||||||||||| Sbjct: 919 tgccgggcgccatggtcgtcaacgtcggcgacctcttccacatcctcaccaatggc 974
>gb|AF407166.1| Homo sapiens PKC-potentiated PP1 inhibitory protein (KEPI) gene, complete cds Length = 168856 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Minus Query: 48 gggaggggaggggaggggcacggcagg 74 |||||||||||||||||||| |||||| Sbjct: 8610 gggaggggaggggaggggcagggcagg 8584
>emb|AL355497.14| Human DNA sequence from clone RP11-472G23 on chromosome 6 Contains the ULBP1 gene for UL16 binding protein 1, a basic transcription factor 3 (BTF3) pseudogene, a pseudogene similar to UL16 binding protein 1 (ULBP1), two retinoic acid early transcript 1 (RAET1L) pseudogenes, the gene for retinoic acid early transcript 1 (RAET1L), a prohibitin (PHB) pseudogene, the ULBP3 gene for UL16 binding protein 3, the 5' end of the PPP1R14C gene for PPP1R14C gene for protein phosphatase 1 regulatory (inhibitor) subunit 14C (KEPI NY-BR-81 CPI17-like), a novel gene and eight CpG islands, complete sequence Length = 215397 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Minus Query: 48 gggaggggaggggaggggcacggcagg 74 |||||||||||||||||||| |||||| Sbjct: 169884 gggaggggaggggaggggcagggcagg 169858
>gb|AC006461.2| Homo sapiens BAC clone RP11-343N14 from 2, complete sequence Length = 181215 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 gggaggggaggggaggggcacgg 70 ||||||||||||||||||||||| Sbjct: 158182 gggaggggaggggaggggcacgg 158204
>dbj|AP004550.2| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-60D22, complete sequence Length = 118465 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 672 aaccttccagggcaagaggcaga 694 ||||||||||||||||||||||| Sbjct: 64567 aaccttccagggcaagaggcaga 64589
>gb|AC172369.4| Gallus gallus BAC clone CH261-43N5 from chromosome ul, complete sequence Length = 207687 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 gggaggggaggggaggggcacg 69 |||||||||||||||||||||| Sbjct: 44612 gggaggggaggggaggggcacg 44591
>gb|AC174985.4| Gallus gallus BAC clone CH261-113G6 from chromosome ul, complete sequence Length = 208762 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 gggaggggaggggaggggcacg 69 |||||||||||||||||||||| Sbjct: 4885 gggaggggaggggaggggcacg 4864
>gb|AC189691.1| Pan troglodytes chromosome UNKNOWN clone CH251-513N20, complete sequence Length = 207180 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 44 tgctgggaggggaggggagggg 65 |||||||||||||||||||||| Sbjct: 120807 tgctgggaggggaggggagggg 120786
>gb|AC125252.7| Mus musculus chromosome 5, clone RP23-388M10, complete sequence Length = 212724 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ttgtacaagatatgaaagataa 371 |||||||||||||||||||||| Sbjct: 79466 ttgtacaagatatgaaagataa 79445
>gb|DQ118252.1| Triticum aestivum gibberellin 3-oxidase 2-3 (GA3ox2-3) mRNA, complete cds Length = 1602 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 872 tcaacgtcggcgacattctccagatcctcaccaa 905 |||||||||||||| | |||||||||||||||| Sbjct: 907 tcaacgtcggcgacctcttccagatcctcaccaa 940
>gb|DQ118251.1| Triticum aestivum gibberellin 3-oxidase 2-2 (GA3ox2-2) mRNA, complete cds Length = 1653 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 872 tcaacgtcggcgacattctccagatcctcaccaa 905 |||||||||||||| | |||||||||||||||| Sbjct: 922 tcaacgtcggcgacctcttccagatcctcaccaa 955
>gb|DQ118250.1| Triticum aestivum gibberellin 3-oxidase 2-1 (GA3ox2-1) mRNA, complete cds Length = 1473 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 872 tcaacgtcggcgacattctccagatcctcaccaa 905 |||||||||||||| | |||||||||||||||| Sbjct: 921 tcaacgtcggcgacctcttccagatcctcaccaa 954
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11, complete sequence Length = 162772 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 gctgggaggggaggggaggggcacgg 70 ||||||||||||||||||||| |||| Sbjct: 72947 gctgggaggggaggggagggggacgg 72972
>gb|L02630.5| Xanthomonas campestris XpsE (xpsE), XpsF (xpsF), XpsG (xpsG), XpsH (xpsH), XpsI (xpsI), XpsJ (xpsJ), XpsK (xpsK), and XpsL (xpsL) genes, complete cds Length = 7813 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 771 cggcctgacgctgctgctgcacgtgg 796 ||||||| |||||||||||||||||| Sbjct: 824 cggcctgccgctgctgctgcacgtgg 849
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 cggatcggcgacaaggtgatca 106 |||||||||||||||||||||| Sbjct: 861792 cggatcggcgacaaggtgatca 861813
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 gctgggaggggaggggaggggcacgg 70 ||||||||||||||||||||| |||| Sbjct: 25130292 gctgggaggggaggggagggggacgg 25130317
>dbj|AP000041.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 12/28, complete sequence Length = 100000 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 44 tgctgggaggggaggggagggg 65 |||||||||||||||||||||| Sbjct: 5028 tgctgggaggggaggggagggg 5007
>gb|AC074052.6| Homo sapiens chromosome 16 clone RP11-483K5, complete sequence Length = 188458 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 44 tgctgggaggggaggggagggg 65 |||||||||||||||||||||| Sbjct: 169194 tgctgggaggggaggggagggg 169173
>gb|AC137777.3| Homo sapiens chromosome 16 clone LA16c-500E3, complete sequence Length = 37346 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 44 tgctgggaggggaggggagggg 65 |||||||||||||||||||||| Sbjct: 26487 tgctgggaggggaggggagggg 26508
>emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 map 22q22.11, complete sequence Length = 192328 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 44 tgctgggaggggaggggagggg 65 |||||||||||||||||||||| Sbjct: 140781 tgctgggaggggaggggagggg 140760
>dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, section 59/105 Length = 340000 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 44 tgctgggaggggaggggagggg 65 |||||||||||||||||||||| Sbjct: 270178 tgctgggaggggaggggagggg 270157
>dbj|AP000284.2| Homo sapiens genomic DNA, chromosome 21 clone:CMP21-S373, complete sequence Length = 32106 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 44 tgctgggaggggaggggagggg 65 |||||||||||||||||||||| Sbjct: 22758 tgctgggaggggaggggagggg 22737
>dbj|AP000185.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone Q78C10-f32E9, segment 12/21, complete sequence Length = 100000 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 44 tgctgggaggggaggggagggg 65 |||||||||||||||||||||| Sbjct: 11004 tgctgggaggggaggggagggg 10983
>dbj|AP000109.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, Q78C10-149C3 region, segment 12/20 Length = 100000 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 44 tgctgggaggggaggggagggg 65 |||||||||||||||||||||| Sbjct: 11004 tgctgggaggggaggggagggg 10983
>gb|AC190038.6| Rhesus Macaque BAC CH250-61F15 () complete sequence Length = 183189 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gggaggggaggggaggggcac 68 ||||||||||||||||||||| Sbjct: 124408 gggaggggaggggaggggcac 124388
>ref|XM_425382.2| PREDICTED: Gallus gallus similar to arylsulfatase G (LOC427811), mRNA Length = 1602 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1090 gaagggacaaggttcgtggat 1110 ||||||||||||||||||||| Sbjct: 184 gaagggacaaggttcgtggat 204
>gb|CP000462.1| Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome Length = 4744448 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 769 ctcggcctgacgctgctgctgcacg 793 ||||||||| ||||||||||||||| Sbjct: 3471882 ctcggcctggcgctgctgctgcacg 3471906
>ref|NM_001071894.1| Oryza sativa (japonica cultivar-group) Os10g0558200 (Os10g0558200) mRNA, complete cds Length = 1023 Score = 42.1 bits (21), Expect = 4.8 Identities = 57/69 (82%) Strand = Plus / Plus Query: 866 tcgtcatcaacgtcggcgacattctccagatcctcaccaatggcacgtacaagagcgccg 925 ||||| |||||||||||||||| || |||| || | |||||| | ||||| ||||| | Sbjct: 749 tcgtcgtcaacgtcggcgacatgcttgagattctgagcaatgggaggtacaggagcgttg 808 Query: 926 agcacaggg 934 ||||||||| Sbjct: 809 agcacaggg 817
>ref|NM_001049522.1| Oryza sativa (japonica cultivar-group) Os01g0352100 (Os01g0352100) mRNA, complete cds Length = 1404 Score = 42.1 bits (21), Expect = 4.8 Identities = 63/77 (81%) Strand = Plus / Plus Query: 859 ggcgccctcgtcatcaacgtcggcgacattctccagatcctcaccaatggcacgtacaag 918 ||||| ||| || ||||||| || ||||||| ||| || |||| ||||| | ||||||| Sbjct: 807 ggcgctctcatcgtcaacgtgggagacattcgtcaggtcttcactaatgggaggtacaag 866 Query: 919 agcgccgagcacagggt 935 |||| ||||||| |||| Sbjct: 867 agcgtcgagcaccgggt 883
>gb|CP000442.1| Burkholderia cepacia AMMD chromosome 3, complete sequence Length = 1281472 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 770 tcggcctgacgctgctgctgc 790 ||||||||||||||||||||| Sbjct: 493662 tcggcctgacgctgctgctgc 493682
>gb|AC187026.8| Canis Familiaris chromosome 17, clone XX-266E21, complete sequence Length = 230004 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 gctgggaggggaggggagggg 65 ||||||||||||||||||||| Sbjct: 134272 gctgggaggggaggggagggg 134292
>emb|CT010485.17| Mouse DNA sequence from clone CH29-161F5 on chromosome 17, complete sequence Length = 258652 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 gggaggggaggggaggggcacggca 72 |||||||||||||||||| |||||| Sbjct: 30121 gggaggggaggggagggggacggca 30145
>gb|AC186201.5| Canis Familiaris chromosome 17, clone XX-304P12, complete sequence Length = 200517 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 gctgggaggggaggggagggg 65 ||||||||||||||||||||| Sbjct: 33081 gctgggaggggaggggagggg 33101
>gb|AC137924.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0095K08, complete sequence Length = 180999 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 gctgggaggggaggggagggg 65 ||||||||||||||||||||| Sbjct: 91156 gctgggaggggaggggagggg 91136
>ref|XM_587120.2| PREDICTED: Bos taurus similar to ring finger protein 122 (LOC510037), partial mRNA Length = 1340 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 ctgggaggggaggggaggggc 66 ||||||||||||||||||||| Sbjct: 1164 ctgggaggggaggggaggggc 1144
>gb|AC147093.3| Pan troglodytes BAC clone RP43-54M16 from 7, complete sequence Length = 189705 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 tgctgggaggggaggggaggg 64 ||||||||||||||||||||| Sbjct: 131946 tgctgggaggggaggggaggg 131926
>gb|AC125141.4| Mus musculus BAC clone RP24-333C3 from chromosome 17, complete sequence Length = 148447 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 gggaggggaggggaggggcacggca 72 |||||||||||||||||| |||||| Sbjct: 74201 gggaggggaggggagggggacggca 74225
>gb|AC124448.4| Mus musculus BAC clone RP24-211A8 from chromosome 18, complete sequence Length = 159308 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 gctgggaggggaggggagggg 65 ||||||||||||||||||||| Sbjct: 78197 gctgggaggggaggggagggg 78177
>gb|AY442346.1| Homo sapiens insulin-like growth factor binding protein 4 (IGFBP4) gene, complete cds Length = 16904 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 382 ttcttcggcttgccgctggagaaga 406 |||||||||||| |||||||||||| Sbjct: 10147 ttcttcggcttggcgctggagaaga 10123
>ref|XM_546425.2| PREDICTED: Canis familiaris similar to roundabout, axon guidance receptor, homolog 3 (LOC489307), mRNA Length = 4383 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 ttgctgggaggggaggggagg 63 ||||||||||||||||||||| Sbjct: 2400 ttgctgggaggggaggggagg 2380
>gb|AC079396.7| Homo sapiens BAC clone RP11-258L19 from 7, complete sequence Length = 61359 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 tgctgggaggggaggggaggg 64 ||||||||||||||||||||| Sbjct: 23337 tgctgggaggggaggggaggg 23317
>gb|AC164009.3| Mus musculus chromosome 18, clone RP24-362C21, complete sequence Length = 134903 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 ttgctgggaggggaggggagg 63 ||||||||||||||||||||| Sbjct: 7675 ttgctgggaggggaggggagg 7655
>gb|AC164010.2| Mus musculus chromosome 18, clone RP24-391C15, complete sequence Length = 162585 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 gctgggaggggaggggagggg 65 ||||||||||||||||||||| Sbjct: 25346 gctgggaggggaggggagggg 25326
>gb|AC018629.12| Homo sapiens chromosome 17, clone RP11-58O9, complete sequence Length = 166234 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 382 ttcttcggcttgccgctggagaaga 406 |||||||||||| |||||||||||| Sbjct: 107957 ttcttcggcttggcgctggagaaga 107933
>ref|NM_153814.1| Rattus norvegicus calcium channel, voltage-dependent, T type, alpha 1H subunit (Cacna1h), mRNA gb|AF290213.2| Rattus norvegicus calcium channel alpha-1-H subunit mRNA, complete cds Length = 7877 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 gggaggggaggggaggggcacggca 72 |||||||||||||||||||| |||| Sbjct: 7826 gggaggggaggggaggggcaaggca 7850
>gb|AC109243.10| Mus musculus chromosome 18, clone RP23-139O19, complete sequence Length = 186687 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 gctgggaggggaggggagggg 65 ||||||||||||||||||||| Sbjct: 113857 gctgggaggggaggggagggg 113837
>gb|AC108050.5| Homo sapiens BAC clone RP11-331M18 from 4, complete sequence Length = 214250 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 887 ttctccagatcctcaccaatg 907 ||||||||||||||||||||| Sbjct: 56008 ttctccagatcctcaccaatg 55988
>gb|AC100748.2| Homo sapiens chromosome 17, clone CTD-2231E3, complete sequence Length = 133544 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tgggaggggaggggaggggca 67 ||||||||||||||||||||| Sbjct: 87211 tgggaggggaggggaggggca 87231
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 gctgggaggggaggggagggg 65 ||||||||||||||||||||| Sbjct: 7906792 gctgggaggggaggggagggg 7906812
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 4.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 869 tcatcaacgtcggcgacattctccagatcctcaccaa 905 |||||||| ||||||||||||| || |||||||||| Sbjct: 12229502 tcatcaacatcggcgacattcttgaggtcctcaccaa 12229466
>emb|CR648949.2|CNS0EZP7 Tetraodon nigroviridis full-length cDNA Length = 1157 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 753 gccgcaccacgacggcctcggcctg 777 |||||||||| |||||||||||||| Sbjct: 652 gccgcaccaccacggcctcggcctg 628
>emb|CR376731.13| Zebrafish DNA sequence from clone DKEY-117K10 in linkage group 8, complete sequence Length = 130762 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 ggatttggacaccactacaac 462 ||||||||||||||||||||| Sbjct: 119666 ggatttggacaccactacaac 119686
>gb|AC091727.2|AC091727 Takifugu rubripes clone 250A8, complete sequence Length = 58366 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 gctgggaggggaggggagggg 65 ||||||||||||||||||||| Sbjct: 25365 gctgggaggggaggggagggg 25345
>emb|AL022344.3|HSY214H10 Human DNA sequence from clone XX-Y214H10 on chromosome 10 Contains a vomeronasal receptor (V1R) pseudogene, a cubilin (intrinsic factor-cobalamin receptor) (CUBN) pseudogene, gene KIAA0187, two novel genes, the gene for a novel protein similar to Ras suppressor protein 1 (RSU1) and four CpG islands, complete sequence Length = 197864 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 gggaggggaggggcacggcag 73 ||||||||||||||||||||| Sbjct: 177360 gggaggggaggggcacggcag 177380
>ref|NM_175593.2| Rattus norvegicus tryptase gamma 1 (Tpsg1), mRNA gb|AY196208.1| Rattus norvegicus tryptase gamma 1 (Tpsg1) mRNA, complete cds Length = 1113 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 gggaggggaggggaggggcacggca 72 |||||||||||||||||||| |||| Sbjct: 1016 gggaggggaggggaggggcaaggca 992
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1001 tggtgaagccgctcccggagc 1021 ||||||||||||||||||||| Sbjct: 806866 tggtgaagccgctcccggagc 806886
>gb|AC008962.9| Homo sapiens chromosome 19 clone CTD-2356P16, complete sequence Length = 154169 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 gctgggaggggaggggagggg 65 ||||||||||||||||||||| Sbjct: 139103 gctgggaggggaggggagggg 139123
>emb|AL591426.17| Mouse DNA sequence from clone RP23-345E8 on chromosome 11 Contains a novel gene, the Arht1 gene for ras homolog gene family member T1, the 5' end of the Rhbdl4 gene for rhomboid veinlet-like 4 (Drosophila), complete sequence Length = 153420 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 gctgggaggggaggggagggg 65 ||||||||||||||||||||| Sbjct: 55617 gctgggaggggaggggagggg 55597
>gb|AC152453.4| Mus musculus BAC clone RP24-238B3 from chromosome 10, complete sequence Length = 182371 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 ctgggaggggaggggaggggc 66 ||||||||||||||||||||| Sbjct: 13539 ctgggaggggaggggaggggc 13559
>dbj|AP005607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_D08 Length = 88854 Score = 42.1 bits (21), Expect = 4.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 869 tcatcaacgtcggcgacattctccagatcctcaccaa 905 |||||||| ||||||||||||| || |||||||||| Sbjct: 52963 tcatcaacatcggcgacattcttgaggtcctcaccaa 52927
>emb|AL928891.20| Mouse DNA sequence from clone RP23-17O9 on chromosome 2, complete sequence Length = 163057 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gggaggggaggggaggggcac 68 ||||||||||||||||||||| Sbjct: 160240 gggaggggaggggaggggcac 160260
>ref|NM_001014274.1| Rattus norvegicus armadillo repeat containing, X-linked 2 (Armcx2), mRNA gb|BC081886.1| Rattus norvegicus armadillo repeat containing, X-linked 2, mRNA (cDNA clone MGC:93762 IMAGE:7108660), complete cds Length = 3320 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 gctgggaggggaggggagggg 65 ||||||||||||||||||||| Sbjct: 107 gctgggaggggaggggagggg 87
>gb|AC148012.5| Mus musculus BAC clone RP23-174D18 from 18, complete sequence Length = 226568 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 gctgggaggggaggggagggg 65 ||||||||||||||||||||| Sbjct: 194626 gctgggaggggaggggagggg 194606
>gb|AC112790.5| Mus musculus BAC clone RP23-160A1 from 10, complete sequence Length = 211714 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 ctgggaggggaggggaggggc 66 ||||||||||||||||||||| Sbjct: 126425 ctgggaggggaggggaggggc 126445
>emb|Y12508.1|HSIGFBP H.sapiens IGFBP-4 gene Length = 21619 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 382 ttcttcggcttgccgctggagaaga 406 |||||||||||| |||||||||||| Sbjct: 13307 ttcttcggcttggcgctggagaaga 13283 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 200,226,055 Number of extensions: 13663015 Number of successful extensions: 388755 Number of sequences better than 10.0: 89 Number of HSP's gapped: 388751 Number of HSP's successfully gapped: 122 Length of query: 1272 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1249 Effective length of database: 18,503,978,556 Effective search space: 23111469216444 Effective search space used: 23111469216444 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)