| Clone Name | FLbaf45p01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001067902.1| Oryza sativa (japonica cultivar-group) Os08g0248800 (Os08g0248800) mRNA, complete cds Length = 1351 Score = 1007 bits (508), Expect = 0.0 Identities = 745/824 (90%) Strand = Plus / Plus Query: 257 agccgcgtccttgaggggtacctcatggccacgctcttctacgagccctccacccgcacg 316 ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 333 agccgcgtcctcgaggggtacctcatggccacgctcttctatgagccgtccacgcgcacg 392 Query: 317 cgcctctccttcgaggccgccatgcgccggctcggcggggaggtgctcaccaccgagaat 376 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 393 cgcctctccttcgaggccgccatgcggcggctcggcggggaggtgctcaccaccgagaac 452 Query: 377 gcccgcgagttctcgtccgctgccaagggcgagaccctagaagataccataagaaccgtt 436 |||||||||||||| ||||| ||||||||||||||||| |||||||||||||| || ||| Sbjct: 453 gcccgcgagttctcctccgccgccaagggcgagaccctggaagataccataaggactgtt 512 Query: 437 gaaggttattctgatattatcgttctgagacattttgaaagtggagctgccagaagagca 496 || ||||||||||||||||| ||||||||||||||||||||||| ||||| || |||||| Sbjct: 513 gagggttattctgatattattgttctgagacattttgaaagtggggctgcaaggagagca 572 Query: 497 gcggctactgcagaaattccggttattaatgcaggtgatgggccagggcaacatcctact 556 || || |||||||| ||||| |||||||||||||| |||||||||||||||||||| ||| Sbjct: 573 gccgccactgcagacattccagttattaatgcaggcgatgggccagggcaacatccaact 632 Query: 557 caggctctgttggatgtatatacaataaagagagaaattggtaggctagatggaatcaaa 616 |||||| | |||||||| ||| ||||| ||||||||||||| | ||||||||||| ||| Sbjct: 633 caggctttattggatgtctattcaatagagagagaaattggcacactagatggaataaaa 692 Query: 617 cttggtttggttggagaccttgctaatgggagaactgttcgttctctggcctatttgatc 676 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 693 cttggtttggttggagaccttgctaatggaagaactgttcgttctctagcctatttgatt 752 Query: 677 gctaaataccaaaacattaagatatacttcgtatctccagatgttgtaaaaatgaaggat 736 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 753 gccaaataccaaaacattaagatatactttgtatctccagatgttgtaaaaatgaaggat 812 Query: 737 gatattaaggagtacttaacttcgcaaggtgtcgaatgggaagaaagttcagatctattg 796 || || ||||| ||||||||||| |||||||| || |||||||||||||||||| | ||| Sbjct: 813 gacatcaaggaatacttaacttctcaaggtgttgagtgggaagaaagttcagatttgttg 872 Query: 797 gatgtggcatccaagtgtgatgtaatttatcaaacacgcattcaaaaagaaagattcgga 856 || |||||||| || || ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 873 gaggtggcatcaaaatgcgatgttatttatcaaacacgcattcaaaaagaaagattcggt 932 Query: 857 gagaggatcgatcactatgaggctgctcgtgggaaatatattgtggataagaaggttcta 916 |||||||| |||| ||||| || |||||||| || || |||||||| |||||||| || Sbjct: 933 gagaggatagatctttatgaagcagctcgtggtaagtacattgtggacaagaaggtctta 992 Query: 917 ggtgtgctgccaaagcatgctgttatcatgcatccccttccaaggctggatgagatcaca 976 | |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 993 gatgtgctgccaaaacatgctgttatcatgcatccccttccaaggcttgatgagatcaca 1052 Query: 977 gtggatgttgatagtgatccaagggctgcatattttaggcaggctaagaatggcctctac 1036 | |||||||| |||||||| || |||||||||||||| ||||| || || ||||||||| Sbjct: 1053 atagatgttgacagtgatccgagagctgcatattttagacaggccaaaaacggcctctac 1112 Query: 1037 ataaggatggcactgctcaaacttctgcttgttggccgttgaca 1080 || || ||||| |||||||||||||||||||||| || ||||| Sbjct: 1113 atcagaatggcgttgctcaaacttctgcttgttggtcgctgaca 1156 Score = 83.8 bits (42), Expect = 1e-12 Identities = 78/90 (86%) Strand = Plus / Plus Query: 149 ctcggagatgtgatcgaggcgcagcagttcgatcggcaggtgcttaatgaaatctttgag 208 ||||| || ||||||||||||||||||||||| ||| | | ||| | || ||||| ||| Sbjct: 216 ctcggggacgtgatcgaggcgcagcagttcgaccgggacgcgctgacggagatcttcgag 275 Query: 209 gtggcgcgggagatggaggccgtggagcgc 238 ||||||||||||||||||||| |||||||| Sbjct: 276 gtggcgcgggagatggaggccctggagcgc 305
>dbj|AK065010.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F02, full insert sequence Length = 1354 Score = 1007 bits (508), Expect = 0.0 Identities = 745/824 (90%) Strand = Plus / Plus Query: 257 agccgcgtccttgaggggtacctcatggccacgctcttctacgagccctccacccgcacg 316 ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 334 agccgcgtcctcgaggggtacctcatggccacgctcttctatgagccgtccacgcgcacg 393 Query: 317 cgcctctccttcgaggccgccatgcgccggctcggcggggaggtgctcaccaccgagaat 376 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 394 cgcctctccttcgaggccgccatgcggcggctcggcggggaggtgctcaccaccgagaac 453 Query: 377 gcccgcgagttctcgtccgctgccaagggcgagaccctagaagataccataagaaccgtt 436 |||||||||||||| ||||| ||||||||||||||||| |||||||||||||| || ||| Sbjct: 454 gcccgcgagttctcctccgccgccaagggcgagaccctggaagataccataaggactgtt 513 Query: 437 gaaggttattctgatattatcgttctgagacattttgaaagtggagctgccagaagagca 496 || ||||||||||||||||| ||||||||||||||||||||||| ||||| || |||||| Sbjct: 514 gagggttattctgatattattgttctgagacattttgaaagtggggctgcaaggagagca 573 Query: 497 gcggctactgcagaaattccggttattaatgcaggtgatgggccagggcaacatcctact 556 || || |||||||| ||||| |||||||||||||| |||||||||||||||||||| ||| Sbjct: 574 gccgccactgcagacattccagttattaatgcaggcgatgggccagggcaacatccaact 633 Query: 557 caggctctgttggatgtatatacaataaagagagaaattggtaggctagatggaatcaaa 616 |||||| | |||||||| ||| ||||| ||||||||||||| | ||||||||||| ||| Sbjct: 634 caggctttattggatgtctattcaatagagagagaaattggcacactagatggaataaaa 693 Query: 617 cttggtttggttggagaccttgctaatgggagaactgttcgttctctggcctatttgatc 676 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 694 cttggtttggttggagaccttgctaatggaagaactgttcgttctctagcctatttgatt 753 Query: 677 gctaaataccaaaacattaagatatacttcgtatctccagatgttgtaaaaatgaaggat 736 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 754 gccaaataccaaaacattaagatatactttgtatctccagatgttgtaaaaatgaaggat 813 Query: 737 gatattaaggagtacttaacttcgcaaggtgtcgaatgggaagaaagttcagatctattg 796 || || ||||| ||||||||||| |||||||| || |||||||||||||||||| | ||| Sbjct: 814 gacatcaaggaatacttaacttctcaaggtgttgagtgggaagaaagttcagatttgttg 873 Query: 797 gatgtggcatccaagtgtgatgtaatttatcaaacacgcattcaaaaagaaagattcgga 856 || |||||||| || || ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 874 gaggtggcatcaaaatgcgatgttatttatcaaacacgcattcaaaaagaaagattcggt 933 Query: 857 gagaggatcgatcactatgaggctgctcgtgggaaatatattgtggataagaaggttcta 916 |||||||| |||| ||||| || |||||||| || || |||||||| |||||||| || Sbjct: 934 gagaggatagatctttatgaagcagctcgtggtaagtacattgtggacaagaaggtctta 993 Query: 917 ggtgtgctgccaaagcatgctgttatcatgcatccccttccaaggctggatgagatcaca 976 | |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 994 gatgtgctgccaaaacatgctgttatcatgcatccccttccaaggcttgatgagatcaca 1053 Query: 977 gtggatgttgatagtgatccaagggctgcatattttaggcaggctaagaatggcctctac 1036 | |||||||| |||||||| || |||||||||||||| ||||| || || ||||||||| Sbjct: 1054 atagatgttgacagtgatccgagagctgcatattttagacaggccaaaaacggcctctac 1113 Query: 1037 ataaggatggcactgctcaaacttctgcttgttggccgttgaca 1080 || || ||||| |||||||||||||||||||||| || ||||| Sbjct: 1114 atcagaatggcgttgctcaaacttctgcttgttggtcgctgaca 1157 Score = 81.8 bits (41), Expect = 6e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 158 gtgatcgaggcgcagcagttcgatcggcaggtgcttaatgaaatctttgaggtggcgcgg 217 ||||||||||||||||||||||| ||| | | ||| | || ||||| |||||||||||| Sbjct: 226 gtgatcgaggcgcagcagttcgaccgggacgcgctgacggagatcttcgaggtggcgcgg 285 Query: 218 gagatggaggccgtggagcgc 238 |||||||||||| |||||||| Sbjct: 286 gagatggaggccctggagcgc 306
>dbj|AB037416.1| Oryza sativa (japonica cultivar-group) mRNA for aspartate carbamoyl transferase, complete cds Length = 1386 Score = 1007 bits (508), Expect = 0.0 Identities = 745/824 (90%) Strand = Plus / Plus Query: 257 agccgcgtccttgaggggtacctcatggccacgctcttctacgagccctccacccgcacg 316 ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 271 agccgcgtcctcgaggggtacctcatggccacgctcttctatgagccgtccacgcgcacg 330 Query: 317 cgcctctccttcgaggccgccatgcgccggctcggcggggaggtgctcaccaccgagaat 376 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 331 cgcctctccttcgaggccgccatgcggcggctcggcggggaggtgctcaccaccgagaac 390 Query: 377 gcccgcgagttctcgtccgctgccaagggcgagaccctagaagataccataagaaccgtt 436 |||||||||||||| ||||| ||||||||||||||||| |||||||||||||| || ||| Sbjct: 391 gcccgcgagttctcctccgccgccaagggcgagaccctggaagataccataaggactgtt 450 Query: 437 gaaggttattctgatattatcgttctgagacattttgaaagtggagctgccagaagagca 496 || ||||||||||||||||| ||||||||||||||||||||||| ||||| || |||||| Sbjct: 451 gagggttattctgatattattgttctgagacattttgaaagtggggctgcaaggagagca 510 Query: 497 gcggctactgcagaaattccggttattaatgcaggtgatgggccagggcaacatcctact 556 || || |||||||| ||||| |||||||||||||| |||||||||||||||||||| ||| Sbjct: 511 gccgccactgcagacattccagttattaatgcaggcgatgggccagggcaacatccaact 570 Query: 557 caggctctgttggatgtatatacaataaagagagaaattggtaggctagatggaatcaaa 616 |||||| | |||||||| ||| ||||| ||||||||||||| | ||||||||||| ||| Sbjct: 571 caggctttattggatgtctattcaatagagagagaaattggcacactagatggaataaaa 630 Query: 617 cttggtttggttggagaccttgctaatgggagaactgttcgttctctggcctatttgatc 676 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 631 cttggtttggttggagaccttgctaatggaagaactgttcgttctctagcctatttgatt 690 Query: 677 gctaaataccaaaacattaagatatacttcgtatctccagatgttgtaaaaatgaaggat 736 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 691 gccaaataccaaaacattaagatatactttgtatctccagatgttgtaaaaatgaaggat 750 Query: 737 gatattaaggagtacttaacttcgcaaggtgtcgaatgggaagaaagttcagatctattg 796 || || ||||| ||||||||||| |||||||| || |||||||||||||||||| | ||| Sbjct: 751 gacatcaaggaatacttaacttctcaaggtgttgagtgggaagaaagttcagatttgttg 810 Query: 797 gatgtggcatccaagtgtgatgtaatttatcaaacacgcattcaaaaagaaagattcgga 856 || |||||||| || || ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 811 gaggtggcatcaaaatgcgatgttatttatcaaacacgcattcaaaaagaaagattcggt 870 Query: 857 gagaggatcgatcactatgaggctgctcgtgggaaatatattgtggataagaaggttcta 916 |||||||| |||| ||||| || |||||||| || || |||||||| |||||||| || Sbjct: 871 gagaggatagatctttatgaagcagctcgtggtaagtacattgtggacaagaaggtctta 930 Query: 917 ggtgtgctgccaaagcatgctgttatcatgcatccccttccaaggctggatgagatcaca 976 | |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 931 gatgtgctgccaaaacatgctgttatcatgcatccccttccaaggcttgatgagatcaca 990 Query: 977 gtggatgttgatagtgatccaagggctgcatattttaggcaggctaagaatggcctctac 1036 | |||||||| |||||||| || |||||||||||||| ||||| || || ||||||||| Sbjct: 991 atagatgttgacagtgatccgagagctgcatattttagacaggccaaaaacggcctctac 1050 Query: 1037 ataaggatggcactgctcaaacttctgcttgttggccgttgaca 1080 || || ||||| |||||||||||||||||||||| || ||||| Sbjct: 1051 atcagaatggcgttgctcaaacttctgcttgttggtcgctgaca 1094 Score = 83.8 bits (42), Expect = 1e-12 Identities = 78/90 (86%) Strand = Plus / Plus Query: 149 ctcggagatgtgatcgaggcgcagcagttcgatcggcaggtgcttaatgaaatctttgag 208 ||||| || ||||||||||||||||||||||| ||| | | ||| | || ||||| ||| Sbjct: 154 ctcggggacgtgatcgaggcgcagcagttcgaccgggacgcgctgacggagatcttcgag 213 Query: 209 gtggcgcgggagatggaggccgtggagcgc 238 ||||||||||||||||||||| |||||||| Sbjct: 214 gtggcgcgggagatggaggccctggagcgc 243
>gb|AY105263.1| Zea mays PCO130702 mRNA sequence Length = 756 Score = 490 bits (247), Expect = e-135 Identities = 376/419 (89%) Strand = Plus / Plus Query: 653 gttcgttctctggcctatttgatcgctaaataccaaaacattaagatatacttcgtatct 712 |||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| |||||| Sbjct: 13 gttcgttctctggcttacttgattgctaagtaccagaacattaagatatactttgtatct 72 Query: 713 ccagatgttgtaaaaatgaaggatgatattaaggagtacttaacttcgcaaggtgtcgaa 772 || |||||||| ||||||||||||||||| ||| | ||||||| ||| ||||||| ||| Sbjct: 73 cctgatgttgttaaaatgaaggatgatatcaagaactacttaaattccaaaggtgttgaa 132 Query: 773 tgggaagaaagttcagatctattggatgtggcatccaagtgtgatgtaatttatcaaaca 832 |||||||||||||||||| | ||||| |||||||||||||||||||| |||||||||||| Sbjct: 133 tgggaagaaagttcagatttgttggaggtggcatccaagtgtgatgttatttatcaaaca 192 Query: 833 cgcattcaaaaagaaagattcggagagaggatcgatcactatgaggctgctcgtgggaaa 892 || ||||||||||||||||| || |||||||| || | ||||| ||||||||||| || Sbjct: 193 cgtattcaaaaagaaagatttggtgagaggattgacctttatgaagctgctcgtggcaag 252 Query: 893 tatattgtggataagaaggttctaggtgtgctgccaaagcatgctgttatcatgcatccc 952 || || |||||||| ||||| ||| |||||||||||| |||||||| |||||||||||| Sbjct: 253 tacatcgtggataaaaaggtcttagatgtgctgccaaaacatgctgtcatcatgcatccc 312 Query: 953 cttccaaggctggatgagatcacagtggatgttgatagtgatccaagggctgcatatttt 1012 ||||||||||| |||||||||||||| || ||||||||||||| ||| |||||||||||| Sbjct: 313 cttccaaggcttgatgagatcacagtagaagttgatagtgatcaaagagctgcatatttt 372 Query: 1013 aggcaggctaagaatggcctctacataaggatggcactgctcaaacttctgcttgttgg 1071 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 373 aggcaggctaagaatggcctctacataaggatggcattgctcaaacttctgcttgttgg 431
>gb|AF457950.1| Zea mays clone cr1n.pk0085.f3, mRNA sequence Length = 689 Score = 260 bits (131), Expect = 1e-65 Identities = 208/227 (91%), Gaps = 5/227 (2%) Strand = Plus / Plus Query: 260 cgcgtccttgaggggtacctcatggccacgctcttctacgagccctccacccgcacgcgc 319 |||||||| ||||||||| |||||||||| |||||||||||||||||||| |||||| || Sbjct: 322 cgcgtcctcgaggggtac-tcatggccactctcttctacgagccctccacgcgcacg-gc 379 Query: 320 ctctccttcgaggccgccatgcgccggctcggcggggaggtgctcaccaccgagaatgcc 379 ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| || Sbjct: 380 ctctccttcgaggccgctatgcga-ggctcggcggggaggtgctcaccaccgagaacgcg 438 Query: 380 cgcgagttctcgtccgctgccaagggcgagaccctagaagataccataagaaccgttgaa 439 ||||||||||| ||||| |||||||| ||||| || ||||||| |||||||||||||| Sbjct: 439 cgcgagttctcttccgccgccaagggggagacactc-aagatac-ataagaaccgttgag 496 Query: 440 ggttattctgatattatcgttctgagacattttgaaagtggagctgc 486 ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 497 ggttattctgatattattgttctgagacattttgaaagtggagctgc 543 Score = 81.8 bits (41), Expect = 6e-12 Identities = 71/80 (88%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 158 gtgatcgaggcgcagcagttcgatcggcaggtgcttaatgaaatctttgaggtggcgcgg 217 ||||| |||||||| ||||||||||| | |||||| || |||||||||||||||||| Sbjct: 221 gtgatagaggcgcan-agttcgatcgggactcgcttaacgagatctttgaggtggcgcgg 279 Query: 218 gagatggaggccgtggagcg 237 |||||||||||||||||||| Sbjct: 280 gagatggaggccgtggagcg 299
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 252 bits (127), Expect = 3e-63 Identities = 211/239 (88%) Strand = Plus / Minus Query: 732 aggatgatattaaggagtacttaacttcgcaaggtgtcgaatgggaagaaagttcagatc 791 ||||||| || ||||| ||||||||||| |||||||| || |||||||||||||||||| Sbjct: 9066568 aggatgacatcaaggaatacttaacttctcaaggtgttgagtgggaagaaagttcagatt 9066509 Query: 792 tattggatgtggcatccaagtgtgatgtaatttatcaaacacgcattcaaaaagaaagat 851 | ||||| |||||||| || || ||||| ||||||||||||||||||||||||||||||| Sbjct: 9066508 tgttggaggtggcatcaaaatgcgatgttatttatcaaacacgcattcaaaaagaaagat 9066449 Query: 852 tcggagagaggatcgatcactatgaggctgctcgtgggaaatatattgtggataagaagg 911 |||| |||||||| |||| ||||| || |||||||| || || |||||||| ||||||| Sbjct: 9066448 tcggtgagaggatagatctttatgaagcagctcgtggtaagtacattgtggacaagaagg 9066389 Query: 912 ttctaggtgtgctgccaaagcatgctgttatcatgcatccccttccaaggctggatgag 970 | ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 9066388 tcttagatgtgctgccaaaacatgctgttatcatgcatccccttccaaggcttgatgag 9066330 Score = 252 bits (127), Expect = 3e-63 Identities = 154/163 (94%) Strand = Plus / Minus Query: 257 agccgcgtccttgaggggtacctcatggccacgctcttctacgagccctccacccgcacg 316 ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 9069208 agccgcgtcctcgaggggtacctcatggccacgctcttctatgagccgtccacgcgcacg 9069149 Query: 317 cgcctctccttcgaggccgccatgcgccggctcggcggggaggtgctcaccaccgagaat 376 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9069148 cgcctctccttcgaggccgccatgcggcggctcggcggggaggtgctcaccaccgagaac 9069089 Query: 377 gcccgcgagttctcgtccgctgccaagggcgagaccctagaag 419 |||||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 9069088 gcccgcgagttctcctccgccgccaagggcgagaccctggaag 9069046 Score = 244 bits (123), Expect = 7e-61 Identities = 165/179 (92%) Strand = Plus / Minus Query: 556 tcaggctctgttggatgtatatacaataaagagagaaattggtaggctagatggaatcaa 615 ||||||| | |||||||| ||| ||||| ||||||||||||| | ||||||||||| || Sbjct: 9066848 tcaggctttattggatgtctattcaatagagagagaaattggcacactagatggaataaa 9066789 Query: 616 acttggtttggttggagaccttgctaatgggagaactgttcgttctctggcctatttgat 675 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 9066788 acttggtttggttggagaccttgctaatggaagaactgttcgttctctagcctatttgat 9066729 Query: 676 cgctaaataccaaaacattaagatatacttcgtatctccagatgttgtaaaaatgaagg 734 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9066728 tgccaaataccaaaacattaagatatactttgtatctccagatgttgtaaaaatgaagg 9066670 Score = 180 bits (91), Expect = 9e-42 Identities = 130/143 (90%) Strand = Plus / Minus Query: 418 agataccataagaaccgttgaaggttattctgatattatcgttctgagacattttgaaag 477 |||||||||||| || ||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 9067668 agataccataaggactgttgagggttattctgatattattgttctgagacattttgaaag 9067609 Query: 478 tggagctgccagaagagcagcggctactgcagaaattccggttattaatgcaggtgatgg 537 ||| ||||| || |||||||| || |||||||| ||||| |||||||||||||| ||||| Sbjct: 9067608 tggggctgcaaggagagcagccgccactgcagacattccagttattaatgcaggcgatgg 9067549 Query: 538 gccagggcaacatcctactcagg 560 ||||||||||||||| ||||||| Sbjct: 9067548 gccagggcaacatccaactcagg 9067526 Score = 103 bits (52), Expect = 2e-18 Identities = 97/112 (86%) Strand = Plus / Minus Query: 969 agatcacagtggatgttgatagtgatccaagggctgcatattttaggcaggctaagaatg 1028 |||||||| | |||||||| |||||||| || |||||||||||||| ||||| || || | Sbjct: 9065682 agatcacaatagatgttgacagtgatccgagagctgcatattttagacaggccaaaaacg 9065623 Query: 1029 gcctctacataaggatggcactgctcaaacttctgcttgttggccgttgaca 1080 |||||||||| || ||||| |||||||||||||||||||||| || ||||| Sbjct: 9065622 gcctctacatcagaatggcgttgctcaaacttctgcttgttggtcgctgaca 9065571 Score = 83.8 bits (42), Expect = 1e-12 Identities = 78/90 (86%) Strand = Plus / Minus Query: 149 ctcggagatgtgatcgaggcgcagcagttcgatcggcaggtgcttaatgaaatctttgag 208 ||||| || ||||||||||||||||||||||| ||| | | ||| | || ||||| ||| Sbjct: 9069325 ctcggggacgtgatcgaggcgcagcagttcgaccgggacgcgctgacggagatcttcgag 9069266 Query: 209 gtggcgcgggagatggaggccgtggagcgc 238 ||||||||||||||||||||| |||||||| Sbjct: 9069265 gtggcgcgggagatggaggccctggagcgc 9069236
>dbj|AP005495.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0003H03 Length = 157905 Score = 252 bits (127), Expect = 3e-63 Identities = 211/239 (88%) Strand = Plus / Minus Query: 732 aggatgatattaaggagtacttaacttcgcaaggtgtcgaatgggaagaaagttcagatc 791 ||||||| || ||||| ||||||||||| |||||||| || |||||||||||||||||| Sbjct: 76878 aggatgacatcaaggaatacttaacttctcaaggtgttgagtgggaagaaagttcagatt 76819 Query: 792 tattggatgtggcatccaagtgtgatgtaatttatcaaacacgcattcaaaaagaaagat 851 | ||||| |||||||| || || ||||| ||||||||||||||||||||||||||||||| Sbjct: 76818 tgttggaggtggcatcaaaatgcgatgttatttatcaaacacgcattcaaaaagaaagat 76759 Query: 852 tcggagagaggatcgatcactatgaggctgctcgtgggaaatatattgtggataagaagg 911 |||| |||||||| |||| ||||| || |||||||| || || |||||||| ||||||| Sbjct: 76758 tcggtgagaggatagatctttatgaagcagctcgtggtaagtacattgtggacaagaagg 76699 Query: 912 ttctaggtgtgctgccaaagcatgctgttatcatgcatccccttccaaggctggatgag 970 | ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 76698 tcttagatgtgctgccaaaacatgctgttatcatgcatccccttccaaggcttgatgag 76640 Score = 252 bits (127), Expect = 3e-63 Identities = 154/163 (94%) Strand = Plus / Minus Query: 257 agccgcgtccttgaggggtacctcatggccacgctcttctacgagccctccacccgcacg 316 ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 79518 agccgcgtcctcgaggggtacctcatggccacgctcttctatgagccgtccacgcgcacg 79459 Query: 317 cgcctctccttcgaggccgccatgcgccggctcggcggggaggtgctcaccaccgagaat 376 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 79458 cgcctctccttcgaggccgccatgcggcggctcggcggggaggtgctcaccaccgagaac 79399 Query: 377 gcccgcgagttctcgtccgctgccaagggcgagaccctagaag 419 |||||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 79398 gcccgcgagttctcctccgccgccaagggcgagaccctggaag 79356 Score = 244 bits (123), Expect = 7e-61 Identities = 165/179 (92%) Strand = Plus / Minus Query: 556 tcaggctctgttggatgtatatacaataaagagagaaattggtaggctagatggaatcaa 615 ||||||| | |||||||| ||| ||||| ||||||||||||| | ||||||||||| || Sbjct: 77158 tcaggctttattggatgtctattcaatagagagagaaattggcacactagatggaataaa 77099 Query: 616 acttggtttggttggagaccttgctaatgggagaactgttcgttctctggcctatttgat 675 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 77098 acttggtttggttggagaccttgctaatggaagaactgttcgttctctagcctatttgat 77039 Query: 676 cgctaaataccaaaacattaagatatacttcgtatctccagatgttgtaaaaatgaagg 734 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 77038 tgccaaataccaaaacattaagatatactttgtatctccagatgttgtaaaaatgaagg 76980 Score = 180 bits (91), Expect = 9e-42 Identities = 130/143 (90%) Strand = Plus / Minus Query: 418 agataccataagaaccgttgaaggttattctgatattatcgttctgagacattttgaaag 477 |||||||||||| || ||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 77978 agataccataaggactgttgagggttattctgatattattgttctgagacattttgaaag 77919 Query: 478 tggagctgccagaagagcagcggctactgcagaaattccggttattaatgcaggtgatgg 537 ||| ||||| || |||||||| || |||||||| ||||| |||||||||||||| ||||| Sbjct: 77918 tggggctgcaaggagagcagccgccactgcagacattccagttattaatgcaggcgatgg 77859 Query: 538 gccagggcaacatcctactcagg 560 ||||||||||||||| ||||||| Sbjct: 77858 gccagggcaacatccaactcagg 77836 Score = 103 bits (52), Expect = 2e-18 Identities = 97/112 (86%) Strand = Plus / Minus Query: 969 agatcacagtggatgttgatagtgatccaagggctgcatattttaggcaggctaagaatg 1028 |||||||| | |||||||| |||||||| || |||||||||||||| ||||| || || | Sbjct: 75992 agatcacaatagatgttgacagtgatccgagagctgcatattttagacaggccaaaaacg 75933 Query: 1029 gcctctacataaggatggcactgctcaaacttctgcttgttggccgttgaca 1080 |||||||||| || ||||| |||||||||||||||||||||| || ||||| Sbjct: 75932 gcctctacatcagaatggcgttgctcaaacttctgcttgttggtcgctgaca 75881 Score = 83.8 bits (42), Expect = 1e-12 Identities = 78/90 (86%) Strand = Plus / Minus Query: 149 ctcggagatgtgatcgaggcgcagcagttcgatcggcaggtgcttaatgaaatctttgag 208 ||||| || ||||||||||||||||||||||| ||| | | ||| | || ||||| ||| Sbjct: 79635 ctcggggacgtgatcgaggcgcagcagttcgaccgggacgcgctgacggagatcttcgag 79576 Query: 209 gtggcgcgggagatggaggccgtggagcgc 238 ||||||||||||||||||||| |||||||| Sbjct: 79575 gtggcgcgggagatggaggccctggagcgc 79546
>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012K14 Length = 155544 Score = 252 bits (127), Expect = 3e-63 Identities = 211/239 (88%) Strand = Plus / Minus Query: 732 aggatgatattaaggagtacttaacttcgcaaggtgtcgaatgggaagaaagttcagatc 791 ||||||| || ||||| ||||||||||| |||||||| || |||||||||||||||||| Sbjct: 2062 aggatgacatcaaggaatacttaacttctcaaggtgttgagtgggaagaaagttcagatt 2003 Query: 792 tattggatgtggcatccaagtgtgatgtaatttatcaaacacgcattcaaaaagaaagat 851 | ||||| |||||||| || || ||||| ||||||||||||||||||||||||||||||| Sbjct: 2002 tgttggaggtggcatcaaaatgcgatgttatttatcaaacacgcattcaaaaagaaagat 1943 Query: 852 tcggagagaggatcgatcactatgaggctgctcgtgggaaatatattgtggataagaagg 911 |||| |||||||| |||| ||||| || |||||||| || || |||||||| ||||||| Sbjct: 1942 tcggtgagaggatagatctttatgaagcagctcgtggtaagtacattgtggacaagaagg 1883 Query: 912 ttctaggtgtgctgccaaagcatgctgttatcatgcatccccttccaaggctggatgag 970 | ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1882 tcttagatgtgctgccaaaacatgctgttatcatgcatccccttccaaggcttgatgag 1824 Score = 252 bits (127), Expect = 3e-63 Identities = 154/163 (94%) Strand = Plus / Minus Query: 257 agccgcgtccttgaggggtacctcatggccacgctcttctacgagccctccacccgcacg 316 ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 4702 agccgcgtcctcgaggggtacctcatggccacgctcttctatgagccgtccacgcgcacg 4643 Query: 317 cgcctctccttcgaggccgccatgcgccggctcggcggggaggtgctcaccaccgagaat 376 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 4642 cgcctctccttcgaggccgccatgcggcggctcggcggggaggtgctcaccaccgagaac 4583 Query: 377 gcccgcgagttctcgtccgctgccaagggcgagaccctagaag 419 |||||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 4582 gcccgcgagttctcctccgccgccaagggcgagaccctggaag 4540 Score = 244 bits (123), Expect = 7e-61 Identities = 165/179 (92%) Strand = Plus / Minus Query: 556 tcaggctctgttggatgtatatacaataaagagagaaattggtaggctagatggaatcaa 615 ||||||| | |||||||| ||| ||||| ||||||||||||| | ||||||||||| || Sbjct: 2342 tcaggctttattggatgtctattcaatagagagagaaattggcacactagatggaataaa 2283 Query: 616 acttggtttggttggagaccttgctaatgggagaactgttcgttctctggcctatttgat 675 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 2282 acttggtttggttggagaccttgctaatggaagaactgttcgttctctagcctatttgat 2223 Query: 676 cgctaaataccaaaacattaagatatacttcgtatctccagatgttgtaaaaatgaagg 734 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2222 tgccaaataccaaaacattaagatatactttgtatctccagatgttgtaaaaatgaagg 2164 Score = 180 bits (91), Expect = 9e-42 Identities = 130/143 (90%) Strand = Plus / Minus Query: 418 agataccataagaaccgttgaaggttattctgatattatcgttctgagacattttgaaag 477 |||||||||||| || ||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 3162 agataccataaggactgttgagggttattctgatattattgttctgagacattttgaaag 3103 Query: 478 tggagctgccagaagagcagcggctactgcagaaattccggttattaatgcaggtgatgg 537 ||| ||||| || |||||||| || |||||||| ||||| |||||||||||||| ||||| Sbjct: 3102 tggggctgcaaggagagcagccgccactgcagacattccagttattaatgcaggcgatgg 3043 Query: 538 gccagggcaacatcctactcagg 560 ||||||||||||||| ||||||| Sbjct: 3042 gccagggcaacatccaactcagg 3020 Score = 103 bits (52), Expect = 2e-18 Identities = 97/112 (86%) Strand = Plus / Minus Query: 969 agatcacagtggatgttgatagtgatccaagggctgcatattttaggcaggctaagaatg 1028 |||||||| | |||||||| |||||||| || |||||||||||||| ||||| || || | Sbjct: 1176 agatcacaatagatgttgacagtgatccgagagctgcatattttagacaggccaaaaacg 1117 Query: 1029 gcctctacataaggatggcactgctcaaacttctgcttgttggccgttgaca 1080 |||||||||| || ||||| |||||||||||||||||||||| || ||||| Sbjct: 1116 gcctctacatcagaatggcgttgctcaaacttctgcttgttggtcgctgaca 1065 Score = 83.8 bits (42), Expect = 1e-12 Identities = 78/90 (86%) Strand = Plus / Minus Query: 149 ctcggagatgtgatcgaggcgcagcagttcgatcggcaggtgcttaatgaaatctttgag 208 ||||| || ||||||||||||||||||||||| ||| | | ||| | || ||||| ||| Sbjct: 4819 ctcggggacgtgatcgaggcgcagcagttcgaccgggacgcgctgacggagatcttcgag 4760 Query: 209 gtggcgcgggagatggaggccgtggagcgc 238 ||||||||||||||||||||| |||||||| Sbjct: 4759 gtggcgcgggagatggaggccctggagcgc 4730
>dbj|AB037417.1| Oryza sativa (japonica cultivar-group) gene for aspartate carbamoyl transferase, complete cds Length = 9188 Score = 252 bits (127), Expect = 3e-63 Identities = 154/163 (94%) Strand = Plus / Plus Query: 257 agccgcgtccttgaggggtacctcatggccacgctcttctacgagccctccacccgcacg 316 ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 4610 agccgcgtcctcgaggggtacctcatggccacgctcttctatgagccgtccacgcgcacg 4669 Query: 317 cgcctctccttcgaggccgccatgcgccggctcggcggggaggtgctcaccaccgagaat 376 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 4670 cgcctctccttcgaggccgccatgcggcggctcggcggggaggtgctcaccaccgagaac 4729 Query: 377 gcccgcgagttctcgtccgctgccaagggcgagaccctagaag 419 |||||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 4730 gcccgcgagttctcctccgccgccaagggcgagaccctggaag 4772 Score = 252 bits (127), Expect = 3e-63 Identities = 211/239 (88%) Strand = Plus / Plus Query: 732 aggatgatattaaggagtacttaacttcgcaaggtgtcgaatgggaagaaagttcagatc 791 ||||||| || ||||| ||||||||||| |||||||| || |||||||||||||||||| Sbjct: 7250 aggatgacatcaaggaatacttaacttctcaaggtgttgagtgggaagaaagttcagatt 7309 Query: 792 tattggatgtggcatccaagtgtgatgtaatttatcaaacacgcattcaaaaagaaagat 851 | ||||| |||||||| || || ||||| ||||||||||||||||||||||||||||||| Sbjct: 7310 tgttggaggtggcatcaaaatgcgatgttatttatcaaacacgcattcaaaaagaaagat 7369 Query: 852 tcggagagaggatcgatcactatgaggctgctcgtgggaaatatattgtggataagaagg 911 |||| |||||||| |||| ||||| || |||||||| || || |||||||| ||||||| Sbjct: 7370 tcggtgagaggatagatctttatgaagcagctcgtggtaagtacattgtggacaagaagg 7429 Query: 912 ttctaggtgtgctgccaaagcatgctgttatcatgcatccccttccaaggctggatgag 970 | ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 7430 tcttagatgtgctgccaaaacatgctgttatcatgcatccccttccaaggcttgatgag 7488 Score = 244 bits (123), Expect = 7e-61 Identities = 165/179 (92%) Strand = Plus / Plus Query: 556 tcaggctctgttggatgtatatacaataaagagagaaattggtaggctagatggaatcaa 615 ||||||| | |||||||| ||| ||||| ||||||||||||| | ||||||||||| || Sbjct: 6970 tcaggctttattggatgtctattcaatagagagagaaattggcacactagatggaataaa 7029 Query: 616 acttggtttggttggagaccttgctaatgggagaactgttcgttctctggcctatttgat 675 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 7030 acttggtttggttggagaccttgctaatggaagaactgttcgttctctagcctatttgat 7089 Query: 676 cgctaaataccaaaacattaagatatacttcgtatctccagatgttgtaaaaatgaagg 734 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 7090 tgccaaataccaaaacattaagatatactttgtatctccagatgttgtaaaaatgaagg 7148 Score = 180 bits (91), Expect = 9e-42 Identities = 130/143 (90%) Strand = Plus / Plus Query: 418 agataccataagaaccgttgaaggttattctgatattatcgttctgagacattttgaaag 477 |||||||||||| || ||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 6150 agataccataaggactgttgagggttattctgatattattgttctgagacattttgaaag 6209 Query: 478 tggagctgccagaagagcagcggctactgcagaaattccggttattaatgcaggtgatgg 537 ||| ||||| || |||||||| || |||||||| ||||| |||||||||||||| ||||| Sbjct: 6210 tggggctgcaaggagagcagccgccactgcagacattccagttattaatgcaggcgatgg 6269 Query: 538 gccagggcaacatcctactcagg 560 ||||||||||||||| ||||||| Sbjct: 6270 gccagggcaacatccaactcagg 6292 Score = 103 bits (52), Expect = 2e-18 Identities = 97/112 (86%) Strand = Plus / Plus Query: 969 agatcacagtggatgttgatagtgatccaagggctgcatattttaggcaggctaagaatg 1028 |||||||| | |||||||| |||||||| || |||||||||||||| ||||| || || | Sbjct: 8136 agatcacaatagatgttgacagtgatccgagagctgcatattttagacaggccaaaaacg 8195 Query: 1029 gcctctacataaggatggcactgctcaaacttctgcttgttggccgttgaca 1080 |||||||||| || ||||| |||||||||||||||||||||| || ||||| Sbjct: 8196 gcctctacatcagaatggcgttgctcaaacttctgcttgttggtcgctgaca 8247 Score = 83.8 bits (42), Expect = 1e-12 Identities = 78/90 (86%) Strand = Plus / Plus Query: 149 ctcggagatgtgatcgaggcgcagcagttcgatcggcaggtgcttaatgaaatctttgag 208 ||||| || ||||||||||||||||||||||| ||| | | ||| | || ||||| ||| Sbjct: 4493 ctcggggacgtgatcgaggcgcagcagttcgaccgggacgcgctgacggagatcttcgag 4552 Query: 209 gtggcgcgggagatggaggccgtggagcgc 238 ||||||||||||||||||||| |||||||| Sbjct: 4553 gtggcgcgggagatggaggccctggagcgc 4582
>emb|AJ319874.1|STU319874 Solanum tuberosum mRNA for aspartate carbamoyltransferase (pyrB gene) Length = 1345 Score = 99.6 bits (50), Expect = 3e-17 Identities = 140/170 (82%) Strand = Plus / Plus Query: 413 ctagaagataccataagaaccgttgaaggttattctgatattatcgttctgagacatttt 472 ||||||||||| || ||||| ||||||||||| |||||||| || ||| |||| ||||| Sbjct: 574 ctagaagatacaattagaactgttgaaggttactctgatatcattgttatgaggcatttc 633 Query: 473 gaaagtggagctgccagaagagcagcggctactgcagaaattccggttattaatgcaggt 532 |||||||| ||||| |||||||| ||| | |||||| |||||| |||| |||||||| Sbjct: 634 gaaagtggtgctgctagaagagcggcgacaactgcatctattccgattataaatgcagga 693 Query: 533 gatgggccagggcaacatcctactcaggctctgttggatgtatatacaat 582 ||||| || || ||||| || |||||||| || | ||||| |||||||| Sbjct: 694 gatggtccgggacaacacccgactcaggcacttctagatgtgtatacaat 743 Score = 63.9 bits (32), Expect = 1e-06 Identities = 77/92 (83%) Strand = Plus / Plus Query: 956 ccaaggctggatgagatcacagtggatgttgatagtgatccaagggctgcatattttagg 1015 ||||| || |||||||| || || ||||||||| ||||||| |||||||| ||||| || Sbjct: 1117 ccaagacttgatgagattactgttgatgttgatggtgatccgagggctgcttatttcaga 1176 Query: 1016 caggctaagaatggcctctacataaggatggc 1047 || ||||||||||| || ||||| ||||||| Sbjct: 1177 caagctaagaatggtctttacattcggatggc 1208 Score = 50.1 bits (25), Expect = 0.021 Identities = 46/53 (86%) Strand = Plus / Plus Query: 701 tacttcgtatctccagatgttgtaaaaatgaaggatgatattaaggagtactt 753 ||||| ||||| || |||||||| |||||||||||||| || ||||| ||||| Sbjct: 862 tactttgtatcccctgatgttgttaaaatgaaggatgacataaaggattactt 914
>gb|L15798.1|PEAPYRB2A Pisum sativum aspartate transcarbamoylase (pyrB2) mRNA, complete cds Length = 1465 Score = 95.6 bits (48), Expect = 4e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 707 gtatctccagatgttgtaaaaatgaaggatgatattaaggagtacttaacttcgcaaggt 766 |||||||| || || |||||||||||||||||||| || || || || || || |||| Sbjct: 939 gtatctcctgaagtggtaaaaatgaaggatgatataaaagactatttgacatcaaaagga 998 Query: 767 gtcgaatgggaagaaagttcagatctattggatgtggcatccaagtgtgatgtaatttat 826 || || |||||||||||||| ||| || |||| ||||| || ||||||| || ||||| Sbjct: 999 gtggattgggaagaaagttctgatttagtggaagtggcgtcggagtgtgacgttgtttat 1058 Query: 827 caaacacgcattcaaaaagaaagattcggaga 858 ||||| || ||||||||||||||||||||||| Sbjct: 1059 caaactcgtattcaaaaagaaagattcggaga 1090 Score = 83.8 bits (42), Expect = 1e-12 Identities = 210/266 (78%) Strand = Plus / Plus Query: 383 gagttctcgtccgctgccaagggcgagaccctagaagataccataagaaccgttgaaggt 442 ||||| |||||||| || || || ||||| || |||||||| |||||||| ||||||||| Sbjct: 615 gagttttcgtccgccgctaaaggagagacacttgaagatacaataagaacagttgaaggt 674 Query: 443 tattctgatattatcgttctgagacattttgaaagtggagctgccagaagagcagcggct 502 || ||||| | || || || |||| ||||||||||| |||||||||||||| ||| || Sbjct: 675 tactctgacttaattgtgcttcgacactttgaaagtggtgctgccagaagagctgcgact 734 Query: 503 actgcagaaattccggttattaatgcaggtgatgggccagggcaacatcctactcaggct 562 | || | ||||| | | |||||||| ||||| || ||||||||||| ||||||| Sbjct: 735 atagctggcattccaatagtcaatgcaggggatggtcccgggcaacatccgtctcaggca 794 Query: 563 ctgttggatgtatatacaataaagagagaaattggtaggctagatggaatcaaacttggt 622 || |||||||| ||||| || | ||||| ||||| | ||| ||||| || ||| | || Sbjct: 795 cttttggatgtctataccattgaaagagagattggaaagcttgatggtataaaagtcggg 854 Query: 623 ttggttggagaccttgctaatgggag 648 | || |||||||| ||||||||||| Sbjct: 855 cttgtgggagacctagctaatgggag 880 Score = 58.0 bits (29), Expect = 9e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 932 catgctgttatcatgcatccccttccaaggctggatgagatcacagtggatgttgatagt 991 |||||||| || ||||| || |||||||| || ||||| || || |||||||||||| Sbjct: 1164 catgctgtgattatgcaccctcttccaagacttgatgaaattaccgtggatgttgatgcc 1223 Query: 992 gatccaagggctgcatattttaggcaggc 1020 |||||||| ||||| || ||||||||||| Sbjct: 1224 gatccaagagctgcttactttaggcaggc 1252
>ref|NM_112924.2| Arabidopsis thaliana amino acid binding / aspartate carbamoyltransferase/ carboxyl- and carbamoyltransferase/ ornithine carbamoyltransferase (AT3G20330) mRNA, complete cds Length = 1675 Score = 89.7 bits (45), Expect = 2e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 770 gaatgggaagaaagttcagatctattggatgtggcatccaagtgtgatgtaatttatcaa 829 ||||||||||||||||||||| || |||| || |||||||||||||||||| |||||||| Sbjct: 1129 gaatgggaagaaagttcagatttaatggaagtagcatccaagtgtgatgtagtttatcaa 1188 Query: 830 acacg 834 ||||| Sbjct: 1189 acacg 1193 Score = 79.8 bits (40), Expect = 2e-11 Identities = 133/164 (81%) Strand = Plus / Plus Query: 416 gaagataccataagaaccgttgaaggttattctgatattatcgttctgagacattttgaa 475 ||||| || |||||||| || || |||||||| ||||| || || || ||||||||||| Sbjct: 775 gaagacacaataagaacagtggagggttattcagatataattgtgatgcgacattttgaa 834 Query: 476 agtggagctgccagaagagcagcggctactgcagaaattccggttattaatgcaggtgat 535 || || ||||| |||| ||| || |||||||| | || || || ||||||||||||||| Sbjct: 835 agcggtgctgcaagaaaagctgcagctactgccaatatacctgtcattaatgcaggtgat 894 Query: 536 gggccagggcaacatcctactcaggctctgttggatgtatatac 579 || || || | ||||||||||||||||| ||||| || ||||| Sbjct: 895 ggtcctggagagcatcctactcaggctctattggacgtctatac 938
>gb|AY090338.1| Arabidopsis thaliana AT3g20330/MQC12_8 mRNA, complete cds Length = 1173 Score = 89.7 bits (45), Expect = 2e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 770 gaatgggaagaaagttcagatctattggatgtggcatccaagtgtgatgtaatttatcaa 829 ||||||||||||||||||||| || |||| || |||||||||||||||||| |||||||| Sbjct: 865 gaatgggaagaaagttcagatttaatggaagtagcatccaagtgtgatgtagtttatcaa 924 Query: 830 acacg 834 ||||| Sbjct: 925 acacg 929 Score = 77.8 bits (39), Expect = 9e-11 Identities = 126/155 (81%) Strand = Plus / Plus Query: 416 gaagataccataagaaccgttgaaggttattctgatattatcgttctgagacattttgaa 475 ||||| || |||||||| || || |||||||| ||||| || || || ||||||||||| Sbjct: 511 gaagacacaataagaacagtggagggttattcagatataattgtgatgcgacattttgaa 570 Query: 476 agtggagctgccagaagagcagcggctactgcagaaattccggttattaatgcaggtgat 535 || || ||||| |||| ||| || |||||||| | || || || ||||||||||||||| Sbjct: 571 agcggtgctgcaagaaaagctgcagctactgccaatatacctgtcattaatgcaggtgat 630 Query: 536 gggccagggcaacatcctactcaggctctgttgga 570 || || || | ||||||||||||||||| ||||| Sbjct: 631 ggtcctggagagcatcctactcaggctctattgga 665
>gb|AY050381.1| Arabidopsis thaliana AT3g20330/MQC12_8 mRNA, complete cds Length = 1666 Score = 89.7 bits (45), Expect = 2e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 770 gaatgggaagaaagttcagatctattggatgtggcatccaagtgtgatgtaatttatcaa 829 ||||||||||||||||||||| || |||| || |||||||||||||||||| |||||||| Sbjct: 1129 gaatgggaagaaagttcagatttaatggaagtagcatccaagtgtgatgtagtttatcaa 1188 Query: 830 acacg 834 ||||| Sbjct: 1189 acacg 1193 Score = 77.8 bits (39), Expect = 9e-11 Identities = 126/155 (81%) Strand = Plus / Plus Query: 416 gaagataccataagaaccgttgaaggttattctgatattatcgttctgagacattttgaa 475 ||||| || |||||||| || || |||||||| ||||| || || || ||||||||||| Sbjct: 775 gaagacacaataagaacagtggagggttattcagatataattgtgatgcgacattttgaa 834 Query: 476 agtggagctgccagaagagcagcggctactgcagaaattccggttattaatgcaggtgat 535 || || ||||| |||| ||| || |||||||| | || || || ||||||||||||||| Sbjct: 835 agcggtgctgcaagaaaagctgcagctactgccaatatacctgtcattaatgcaggtgat 894 Query: 536 gggccagggcaacatcctactcaggctctgttgga 570 || || || | ||||||||||||||||| ||||| Sbjct: 895 ggtcctggagagcatcctactcaggctctattgga 929
>emb|X71843.1|ATPYRBA A.thaliana pyrB mRNA Length = 1687 Score = 89.7 bits (45), Expect = 2e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 770 gaatgggaagaaagttcagatctattggatgtggcatccaagtgtgatgtaatttatcaa 829 ||||||||||||||||||||| || |||| || |||||||||||||||||| |||||||| Sbjct: 1118 gaatgggaagaaagttcagatttaatggaagtagcatccaagtgtgatgtagtttatcaa 1177 Query: 830 acacg 834 ||||| Sbjct: 1178 acacg 1182 Score = 79.8 bits (40), Expect = 2e-11 Identities = 133/164 (81%) Strand = Plus / Plus Query: 416 gaagataccataagaaccgttgaaggttattctgatattatcgttctgagacattttgaa 475 ||||| || |||||||| || || |||||||| ||||| || || || ||||||||||| Sbjct: 764 gaagacacaataagaacagtggagggttattcagatataattgtgatgcgacattttgaa 823 Query: 476 agtggagctgccagaagagcagcggctactgcagaaattccggttattaatgcaggtgat 535 || || ||||| |||| ||| || |||||||| | || || || ||||||||||||||| Sbjct: 824 agcggtgctgcaagaaaagctgcagctactgccaatatacctgtcattaatgcaggtgat 883 Query: 536 gggccagggcaacatcctactcaggctctgttggatgtatatac 579 || || || | ||||||||||||||||| ||||| || ||||| Sbjct: 884 ggtcctggagagcatcctactcaggctctattggacgtctatac 927
>dbj|AK175118.1| Arabidopsis thaliana mRNA for aspartate carbamoyltransferase precursor, complete cds, clone: RAFL21-52-D05 Length = 1732 Score = 89.7 bits (45), Expect = 2e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 770 gaatgggaagaaagttcagatctattggatgtggcatccaagtgtgatgtaatttatcaa 829 ||||||||||||||||||||| || |||| || |||||||||||||||||| |||||||| Sbjct: 1185 gaatgggaagaaagttcagatttaatggaagtagcatccaagtgtgatgtagtttatcaa 1244 Query: 830 acacg 834 ||||| Sbjct: 1245 acacg 1249 Score = 79.8 bits (40), Expect = 2e-11 Identities = 133/164 (81%) Strand = Plus / Plus Query: 416 gaagataccataagaaccgttgaaggttattctgatattatcgttctgagacattttgaa 475 ||||| || |||||||| || || |||||||| ||||| || || || ||||||||||| Sbjct: 831 gaagacacaataagaacagtggagggttattcagatataattgtgatgcgacattttgaa 890 Query: 476 agtggagctgccagaagagcagcggctactgcagaaattccggttattaatgcaggtgat 535 || || ||||| |||| ||| || |||||||| | || || || ||||||||||||||| Sbjct: 891 agcggtgctgcaagaaaagctgcagctactgccaatatacctgtcattaatgcaggtgat 950 Query: 536 gggccagggcaacatcctactcaggctctgttggatgtatatac 579 || || || | ||||||||||||||||| ||||| || ||||| Sbjct: 951 ggtcctggagagcatcctactcaggctctattggacgtctatac 994
>dbj|AB024036.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MQC12 Length = 87799 Score = 89.7 bits (45), Expect = 2e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 770 gaatgggaagaaagttcagatctattggatgtggcatccaagtgtgatgtaatttatcaa 829 ||||||||||||||||||||| || |||| || |||||||||||||||||| |||||||| Sbjct: 27703 gaatgggaagaaagttcagatttaatggaagtagcatccaagtgtgatgtagtttatcaa 27644 Query: 830 acacg 834 ||||| Sbjct: 27643 acacg 27639 Score = 63.9 bits (32), Expect = 1e-06 Identities = 110/136 (80%) Strand = Plus / Minus Query: 425 ataagaaccgttgaaggttattctgatattatcgttctgagacattttgaaagtggagct 484 |||||||| || || |||||||| ||||| || || || ||||||||||||| || ||| Sbjct: 28265 ataagaacagtggagggttattcagatataattgtgatgcgacattttgaaagcggtgct 28206 Query: 485 gccagaagagcagcggctactgcagaaattccggttattaatgcaggtgatgggccaggg 544 || |||| ||| || |||||||| | || || || ||||||||||||||||| || || Sbjct: 28205 gcaagaaaagctgcagctactgccaatatacctgtcattaatgcaggtgatggtcctgga 28146 Query: 545 caacatcctactcagg 560 | ||||||||||||| Sbjct: 28145 gagcatcctactcagg 28130
>gb|AC189361.1| Brassica rapa subsp. pekinensis clone KBrB045I12, complete sequence Length = 90316 Score = 83.8 bits (42), Expect = 1e-12 Identities = 57/62 (91%) Strand = Plus / Minus Query: 770 gaatgggaagaaagttcagatctattggatgtggcatccaagtgtgatgtaatttatcaa 829 |||||||||||||||||||||||| |||| || ||||| |||||||||||| |||||||| Sbjct: 1556 gaatgggaagaaagttcagatctaatggaggtagcatcaaagtgtgatgtagtttatcaa 1497 Query: 830 ac 831 || Sbjct: 1496 ac 1495 Score = 79.8 bits (40), Expect = 2e-11 Identities = 97/116 (83%) Strand = Plus / Minus Query: 422 accataagaaccgttgaaggttattctgatattatcgttctgagacattttgaaagtgga 481 ||||||||||| || || ||||| || ||||| ||||| || ||||||||||||| || Sbjct: 2115 accataagaacggtggagggttactcagatataatcgtgatgcgacattttgaaagcggt 2056 Query: 482 gctgccagaagagcagcggctactgcagaaattccggttattaatgcaggtgatgg 537 ||||| | |||||| || ||||||||| | || || |||||||||||||||||||| Sbjct: 2055 gctgctaaaagagctgcagctactgcaaatatacctgttattaatgcaggtgatgg 2000
>gb|U05293.1|PSU05293 Pisum sativum Wando aspartate carbamoyltransferase (pyrB3) mRNA, complete cds Length = 1568 Score = 79.8 bits (40), Expect = 2e-11 Identities = 124/152 (81%) Strand = Plus / Plus Query: 707 gtatctccagatgttgtaaaaatgaaggatgatattaaggagtacttaacttcgcaaggt 766 |||||||| || || |||||||||||||||||||| || || || || || || |||| Sbjct: 885 gtatctcctgaagtggtaaaaatgaaggatgatataaaagactatttgacatcaaaagga 944 Query: 767 gtcgaatgggaagaaagttcagatctattggatgtggcatccaagtgtgatgtaatttat 826 || || ||||| |||||||| ||| || |||| ||||| || ||||||| || ||||| Sbjct: 945 gtggattgggaggaaagttctgatttagtggaagtggcgtcggagtgtgacgttgtttat 1004 Query: 827 caaacacgcattcaaaaagaaagattcggaga 858 ||||| || ||||||||||||||||| ||||| Sbjct: 1005 caaactcgtattcaaaaagaaagatttggaga 1036 Score = 73.8 bits (37), Expect = 1e-09 Identities = 82/97 (84%) Strand = Plus / Plus Query: 407 gagaccctagaagataccataagaaccgttgaaggttattctgatattatcgttctgaga 466 ||||| || |||||||| |||||||| ||||||||||| ||||| | || || || || Sbjct: 585 gagacacttgaagatacaataagaacagttgaaggttactctgacttaattgtgcttcga 644 Query: 467 cattttgaaagtggagctgccagaagagcagcggcta 503 || ||||||||||| |||||||||||||| ||||||| Sbjct: 645 cactttgaaagtggtgctgccagaagagctgcggcta 681 Score = 50.1 bits (25), Expect = 0.021 Identities = 73/89 (82%) Strand = Plus / Plus Query: 932 catgctgttatcatgcatccccttccaaggctggatgagatcacagtggatgttgatagt 991 |||||||| || ||||| || ||||| || || ||||| || || |||||||||||| Sbjct: 1110 catgctgtgattatgcaccctcttcctagacttgatgaaattaccgtggatgttgatgcc 1169 Query: 992 gatccaagggctgcatattttaggcaggc 1020 |||||||| ||||| || ||||||||||| Sbjct: 1170 gatccaagagctgcttactttaggcaggc 1198
>emb|BX822734.1|CNS0A75B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZB08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1590 Score = 73.8 bits (37), Expect = 1e-09 Identities = 121/149 (81%) Strand = Plus / Plus Query: 416 gaagataccataagaaccgttgaaggttattctgatattatcgttctgagacattttgaa 475 ||||| || |||||||| || || |||||||| ||||| || || || ||||||||||| Sbjct: 737 gaagacacaataagaacagtggagggttattcagatataattgtgatgcgacattttgaa 796 Query: 476 agtggagctgccagaagagcagcggctactgcagaaattccggttattaatgcaggtgat 535 || || ||||| |||| ||| || |||||||| | || || || ||||||||||||||| Sbjct: 797 agcggtgctgcaagaaaagctgcagctactgccaatatacctgtcattaatgcaggtgat 856 Query: 536 gggccagggcaacatcctactcaggctct 564 || || || | ||||||||||||||||| Sbjct: 857 ggtcctggagagcatcctactcaggctct 885 Score = 48.1 bits (24), Expect = 0.083 Identities = 54/64 (84%) Strand = Plus / Plus Query: 770 gaatgggaagaaagttcagatctattggatgtggcatccaagtgtgatgtaatttatcaa 829 ||||||||||||||||||||| || |||| || |||||| |||| |||| ||||||| Sbjct: 1090 gaatgggaagaaagttcagatttaatggaagtagcatccttgtgttatgttttttatcat 1149 Query: 830 acac 833 |||| Sbjct: 1150 acac 1153
>gb|M96981.1|PEAPYRB1A Pisum sativum aspartate carbamoyltransferase (pyrB1) mRNA, complete cds Length = 1575 Score = 71.9 bits (36), Expect = 6e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 980 gatgttgatagtgatccaagggctgcatattttaggcaggctaagaatggcctctacata 1039 ||||| |||| ||||||||| ||||| |||||||||||||| ||||||||| | ||||| Sbjct: 1237 gatgtcgataatgatccaagagctgcttattttaggcaggcaaagaatggcttatacatt 1296 Query: 1040 aggatggc 1047 |||||||| Sbjct: 1297 aggatggc 1304 Score = 67.9 bits (34), Expect = 9e-08 Identities = 118/146 (80%) Strand = Plus / Plus Query: 407 gagaccctagaagataccataagaaccgttgaaggttattctgatattatcgttctgaga 466 ||||| || |||||||| |||||||| ||||||||||| |||||||| || || || | Sbjct: 664 gagacactcgaagatactataagaacggttgaaggttactctgatataattgtattgcgc 723 Query: 467 cattttgaaagtggagctgccagaagagcagcggctactgcagaaattccggttattaat 526 || |||||||| || || || |||||||| || || ||||| | ||||||||||| ||| Sbjct: 724 cactttgaaagcggtgcagcgagaagagctgcagcgactgctaacattccggttatcaat 783 Query: 527 gcaggtgatgggccagggcaacatcc 552 || || ||||| ||||| || ||||| Sbjct: 784 gctggggatggcccaggacagcatcc 809 Score = 56.0 bits (28), Expect = 3e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 773 tgggaagaaagttcagatctattggatgtggcatccaagtgtgatgtaatttatcaaaca 832 |||||||||||||| ||| | |||| || || || ||||| ||||| |||||||||| Sbjct: 1030 tgggaagaaagttctgatttgatggaagtcgcttctaagtgcgatgtggtttatcaaact 1089 Query: 833 cgcattcaaaaagaaagattcggagaga 860 |||||||| || |||||||| ||||||| Sbjct: 1090 cgcattcagaaggaaagatttggagaga 1117
>emb|CT573504.2| Medicago truncatula chromosome 5 clone mth2-178o19, COMPLETE SEQUENCE Length = 132030 Score = 67.9 bits (34), Expect = 9e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 773 tgggaagaaagttcagatctattggatgtggcatccaagtgtgatgtaatttatcaaaca 832 |||||||||||||| ||| | |||| ||||| || |||||||| ||| |||||||||| Sbjct: 13503 tgggaagaaagttctgatttgatggaagtggcttcaaagtgtgacgtagtttatcaaact 13444 Query: 833 cgcattcaaaaagaaagattcggaga 858 |||||||| || |||||||| ||||| Sbjct: 13443 cgcattcagaaggaaagatttggaga 13418 Score = 54.0 bits (27), Expect = 0.001 Identities = 114/143 (79%) Strand = Plus / Minus Query: 418 agataccataagaaccgttgaaggttattctgatattatcgttctgagacattttgaaag 477 |||||| |||||||| ||||||||||| |||||||| || || || | || |||||||| Sbjct: 14766 agatactataagaacagttgaaggttactctgatataattgtcttgcggcactttgaaag 14707 Query: 478 tggagctgccagaagagcagcggctactgcagaaattccggttattaatgcaggtgatgg 537 ||| || || |||||||| || | ||||| ||||| || || |||||||| ||||| Sbjct: 14706 tggcgcagcgagaagagctgcaacaactgctagcattccagtaatcaatgcaggggatgg 14647 Query: 538 gccagggcaacatcctactcagg 560 || || || ||||||||||||| Sbjct: 14646 cccgggacagcatcctactcagg 14624 Score = 48.1 bits (24), Expect = 0.083 Identities = 60/72 (83%) Strand = Plus / Minus Query: 976 agtggatgttgatagtgatccaagggctgcatattttaggcaggctaagaatggcctcta 1035 |||||| || |||||||||||||| ||||| || |||||||| || || ||||| || || Sbjct: 13205 agtggaagtcgatagtgatccaagagctgcttactttaggcaagcgaaaaatggtctata 13146 Query: 1036 cataaggatggc 1047 || |||||||| Sbjct: 13145 tattaggatggc 13134 Score = 42.1 bits (21), Expect = 5.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 629 ggagaccttgctaatgggagaactgttcg 657 ||||||||||||||||| ||||| ||||| Sbjct: 13744 ggagaccttgctaatggcagaacggttcg 13716
>gb|AC146651.10| Medicago truncatula clone mth2-113d3, complete sequence Length = 157296 Score = 67.9 bits (34), Expect = 9e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 773 tgggaagaaagttcagatctattggatgtggcatccaagtgtgatgtaatttatcaaaca 832 |||||||||||||| ||| || |||| ||||| ||| ||||||| || |||||||||| Sbjct: 20470 tgggaagaaagttctgatttagtggaagtggcctccgagtgtgacgtggtttatcaaact 20411 Query: 833 cgcattcaaaaagaaagattcggaga 858 || |||||||||||| |||| ||||| Sbjct: 20410 cgtattcaaaaagaacgatttggaga 20385 Score = 58.0 bits (29), Expect = 9e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 969 agatcacagtggatgttgatagtgatccaagggctgcatattttaggca 1017 ||||||| |||||||||||| ||||||||||||||| || |||||||| Sbjct: 20174 agatcactgtggatgttgatgctgatccaagggctgcttactttaggca 20126 Score = 52.0 bits (26), Expect = 0.005 Identities = 65/78 (83%) Strand = Plus / Minus Query: 418 agataccataagaaccgttgaaggttattctgatattatcgttctgagacattttgaaag 477 |||||| |||||||| ||||| ||||| ||||| | || || || |||| |||||||| Sbjct: 21620 agatacaataagaacagttgagggttactctgacttaattgtgcttcgacactttgaaag 21561 Query: 478 tggagctgccagaagagc 495 ||| |||||||||||||| Sbjct: 21560 tggtgctgccagaagagc 21543 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 710 tctccagatgttgtaaaaatgaagg 734 ||||||||||| ||||||||||||| Sbjct: 20759 tctccagatgtggtaaaaatgaagg 20735
>emb|X74072.1|LEACTASE L.esculentum mRNA for aspatate carbamoyltransferase Length = 988 Score = 67.9 bits (34), Expect = 9e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 413 ctagaagataccataagaaccgttgaaggttattctgatattatcgttctgagacatttt 472 ||||||||||| || ||||| ||||||||||| |||||||| || ||| |||| ||||| Sbjct: 142 ctagaagatacaattagaactgttgaaggttactctgatatcattgttatgaggcatttc 201 Query: 473 gaaagtggagctgc 486 |||||||| ||||| Sbjct: 202 gaaagtggtgctgc 215 Score = 63.9 bits (32), Expect = 1e-06 Identities = 77/92 (83%) Strand = Plus / Plus Query: 956 ccaaggctggatgagatcacagtggatgttgatagtgatccaagggctgcatattttagg 1015 ||||| || |||||||| || || ||||| ||| ||||||| |||||||| ||||| || Sbjct: 685 ccaagacttgatgagataacggttgatgtcgatggtgatccgagggctgcttatttcaga 744 Query: 1016 caggctaagaatggcctctacataaggatggc 1047 || ||||||||||| |||||||| ||||||| Sbjct: 745 caagctaagaatggtctctacattcggatggc 776 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 695 aagatatacttcgtatctccagatgttgtaaaaatgaaggatgatattaaggagtactt 753 ||||| ||||| ||||| || |||||||| |||||||||||||| || ||||| ||||| Sbjct: 424 aagatttactttgtatcccctgatgttgttaaaatgaaggatgacataaaggattactt 482
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 63.9 bits (32), Expect = 1e-06 Identities = 38/40 (95%) Strand = Plus / Minus Query: 282 tggccacgctcttctacgagccctccacccgcacgcgcct 321 |||||||||| |||||||||||||||||||| |||||||| Sbjct: 574174 tggccacgctgttctacgagccctccacccgtacgcgcct 574135
>gb|DQ516885.1| Methanocaldococcus jannaschii spike-in control MJ-6000-169 genomic sequence Length = 6000 Score = 52.0 bits (26), Expect = 0.005 Identities = 53/62 (85%) Strand = Plus / Plus Query: 548 catcctactcaggctctgttggatgtatatacaataaagagagaaattggtaggctagat 607 ||||||||||| |||| |||||| |||| ||||||| |||||| ||||| ||| ||||| Sbjct: 2593 catcctactcaaactcttttggatttatacacaataatgagagagattggcaggatagat 2652 Query: 608 gg 609 || Sbjct: 2653 gg 2654
>gb|AE010396.1| Methanopyrus kandleri AV19 section 95 of 157 of the complete genome Length = 10029 Score = 52.0 bits (26), Expect = 0.005 Identities = 47/54 (87%) Strand = Plus / Minus Query: 302 ccctccacccgcacgcgcctctccttcgaggccgccatgcgccggctcggcggg 355 |||||||||||||| ||| |||||||||||| ||||||| || ||| |||||| Sbjct: 4846 ccctccacccgcacccgcgtctccttcgaggtggccatgcaccagctgggcggg 4793
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 52.0 bits (26), Expect = 0.005 Identities = 53/62 (85%) Strand = Plus / Plus Query: 548 catcctactcaggctctgttggatgtatatacaataaagagagaaattggtaggctagat 607 ||||||||||| |||| |||||| |||| ||||||| |||||| ||||| ||| ||||| Sbjct: 1556143 catcctactcaaactcttttggatttatacacaataatgagagagattggcaggatagat 1556202 Query: 608 gg 609 || Sbjct: 1556203 gg 1556204
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 52.0 bits (26), Expect = 0.005 Identities = 41/46 (89%) Strand = Plus / Minus Query: 282 tggccacgctcttctacgagccctccacccgcacgcgcctctcctt 327 |||||||| |||||| ||||||||||||||||| ||| ||||||| Sbjct: 417172 tggccacggtcttctttgagccctccacccgcacccgcatctcctt 417127
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 50.1 bits (25), Expect = 0.021 Identities = 31/33 (93%) Strand = Plus / Minus Query: 300 agccctccacccgcacgcgcctctccttcgagg 332 ||||||| ||||||||||| ||||||||||||| Sbjct: 3239627 agccctcgacccgcacgcggctctccttcgagg 3239595 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 293 ttctacgagccctccacccgcac 315 ||||||||||||||||||||||| Sbjct: 1394605 ttctacgagccctccacccgcac 1394627
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 48.1 bits (24), Expect = 0.083 Identities = 42/48 (87%) Strand = Plus / Plus Query: 290 ctcttctacgagccctccacccgcacgcgcctctccttcgaggccgcc 337 ||||||| |||| |||||||||||| || ||||||||||||||||| Sbjct: 8190380 ctcttcttcgaggactccacccgcacccggatctccttcgaggccgcc 8190427
>gb|AE011934.1| Xanthomonas axonopodis pv. citri str. 306, section 312 of 469 of the complete genome Length = 11778 Score = 46.1 bits (23), Expect = 0.33 Identities = 38/43 (88%) Strand = Plus / Minus Query: 286 cacgctcttctacgagccctccacccgcacgcgcctctccttc 328 |||||| |||| |||||||||||| ||||||||| ||||||| Sbjct: 2503 cacgctgttcttcgagccctccacgcgcacgcgcagctccttc 2461
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 46.1 bits (23), Expect = 0.33 Identities = 47/55 (85%) Strand = Plus / Plus Query: 300 agccctccacccgcacgcgcctctccttcgaggccgccatgcgccggctcggcgg 354 |||| |||||||||||||| | |||||||| | || |||||||| ||||||||| Sbjct: 8915 agccgtccacccgcacgcgtgtttccttcgatgtcggcatgcgccagctcggcgg 8969
>gb|AC154118.6| Mus musculus chromosome 19, clone RP24-340C10, complete sequence Length = 141422 Score = 46.1 bits (23), Expect = 0.33 Identities = 26/27 (96%) Strand = Plus / Plus Query: 21 ccctccctcatcccctccttcccaccc 47 ||||||||| ||||||||||||||||| Sbjct: 12626 ccctccctcctcccctccttcccaccc 12652
>ref|NM_205040.1| Gallus gallus DGCR6 homolog (DGCR6), mRNA gb|AF048985.1|AF048985 Gallus gallus DGCR6 homolog (DGCR6) mRNA, complete cds Length = 1417 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 214 gcgggagatggaggccgtggagc 236 ||||||||||||||||||||||| Sbjct: 596 gcgggagatggaggccgtggagc 618
>gb|AC159810.2| Mus musculus BAC clone RP24-94A19 from chromosome 9, complete sequence Length = 168537 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1137 attgttggctccaagttcaatt 1158 |||||||||||||||||||||| Sbjct: 15492 attgttggctccaagttcaatt 15471
>gb|AC165080.4| Mus musculus BAC clone RP24-93F20 from chromosome 9, complete sequence Length = 194427 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1137 attgttggctccaagttcaatt 1158 |||||||||||||||||||||| Sbjct: 188763 attgttggctccaagttcaatt 188742
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 331 ggccgccatgcgccggctcggc 352 |||||||||||||||||||||| Sbjct: 3604536 ggccgccatgcgccggctcggc 3604515
>gb|AC148301.3| Pan troglodytes BAC clone CH251-69O15 from chromosome 7, complete sequence Length = 166304 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 cctccctcatcccctccttccc 43 |||||||||||||||||||||| Sbjct: 148725 cctccctcatcccctccttccc 148746
>gb|AC134866.3| Homo sapiens BAC clone RP11-1398B17 from 7, complete sequence Length = 172963 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 cctccctcatcccctccttccc 43 |||||||||||||||||||||| Sbjct: 7078 cctccctcatcccctccttccc 7057
>gb|AC004166.12| Homo sapiens Chromosome 7 BAC Clone 239c10, complete sequence Length = 275197 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 cctccctcatcccctccttccc 43 |||||||||||||||||||||| Sbjct: 184769 cctccctcatcccctccttccc 184748
>gb|AC005098.2|AC005098 Homo sapiens BAC clone CTA-350L10 from 7q11.2, complete sequence Length = 230552 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 cctccctcatcccctccttccc 43 |||||||||||||||||||||| Sbjct: 197886 cctccctcatcccctccttccc 197865
>gb|AC004867.5|AC004867 Homo sapiens PAC clone RP4-728P19 from 7, complete sequence Length = 143737 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 cctccctcatcccctccttccc 43 |||||||||||||||||||||| Sbjct: 44859 cctccctcatcccctccttccc 44880
>gb|AC005071.2|AC005071 Homo sapiens clone RG161A02, complete sequence Length = 209382 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 cctccctcatcccctccttccc 43 |||||||||||||||||||||| Sbjct: 95639 cctccctcatcccctccttccc 95660
>gb|U63544.1|MMNKTR1 Mus musculus natural killer tumor recognition protein (Nktr) gene, exons 1, 2, 3, 4 and 5 Length = 15440 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1137 attgttggctccaagttcaatt 1158 |||||||||||||||||||||| Sbjct: 5551 attgttggctccaagttcaatt 5572
>ref|XM_001019334.1| Tetrahymena thermophila SB210 Zn-finger in ubiquitin-hydrolases and other protein (TTHERM_00388300) mRNA, complete cds Length = 1776 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1166 gctgtggaaggtataagaaag 1186 ||||||||||||||||||||| Sbjct: 878 gctgtggaaggtataagaaag 898
>gb|AC131065.16| Mus musculus chromosome 18, clone RP23-21J21, complete sequence Length = 208270 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 tcatcccctccttcccacccc 48 ||||||||||||||||||||| Sbjct: 22823 tcatcccctccttcccacccc 22803
>gb|U73916.1|LUU73916 Linum usitatissimum rust resistance protein M gene, complete cds Length = 6050 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 827 caaacacgcattcaaaaagaa 847 ||||||||||||||||||||| Sbjct: 1735 caaacacgcattcaaaaagaa 1755
>gb|AC002453.1| Homo sapiens BAC clone GS1-440B14 from 7, complete sequence Length = 70319 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1120 taaaaaatgtagccttaattg 1140 ||||||||||||||||||||| Sbjct: 22967 taaaaaatgtagccttaattg 22987
>gb|AC127331.4| Mus musculus BAC clone RP23-127A19 from 18, complete sequence Length = 179177 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 tcatcccctccttcccacccc 48 ||||||||||||||||||||| Sbjct: 160364 tcatcccctccttcccacccc 160344
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 5.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 307 cacccgcacgcgcctctccttcgaggccg 335 |||||| |||||||| ||||||||||||| Sbjct: 3275749 cacccgaacgcgcctatccttcgaggccg 3275721
>gb|AE006012.1| Caulobacter crescentus CB15 section 338 of 359 of the complete genome Length = 10208 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 cccgccgcgcggtcgccgcct 107 ||||||||||||||||||||| Sbjct: 6621 cccgccgcgcggtcgccgcct 6641
>emb|AL445531.10| Human DNA sequence from clone RP11-546O6 on chromosome 9 Contains the 3' end of the NCBP1 gene for nuclear cap binding protein subunit 1, 80kDa (NCBP, CBP80), the XPA gene for xeroderma pigmentosum, complementation group A (XP1, XPAC), a keratin 18 (KRT18) pseudogene and two CpG islands, complete sequence Length = 111345 Score = 42.1 bits (21), Expect = 5.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 947 catccccttccaaggctggatgagatcac 975 ||||||||||| | ||||||||||||||| Sbjct: 92497 catccccttcccaagctggatgagatcac 92525
>emb|AL354807.6| Human DNA sequence from clone RP11-522F22 on chromosome 13 Contains a DnaJ (Hsp40) homolog, subfamily A, member 1 (DNAJA1) pseudogene, complete sequence Length = 157135 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1190 gatccttgtaagaataaagca 1210 ||||||||||||||||||||| Sbjct: 15551 gatccttgtaagaataaagca 15531
>emb|AL160059.7| Human DNA sequence from clone RP11-94G15 on chromosome 1 Contains the 5' end of the CACNA1E gene for calcium channel voltage-dependent alpha 1E subunit, complete sequence Length = 153926 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 tcccctccttcccaccccttc 51 ||||||||||||||||||||| Sbjct: 102689 tcccctccttcccaccccttc 102709
>emb|AL133232.15| Human DNA sequence from clone RP5-897D18 on chromosome 20 Contains part of a gene for a putative novel protein, EST, STSs and GSSs, complete sequence Length = 95097 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 633 accttgctaatgggagaactg 653 ||||||||||||||||||||| Sbjct: 35736 accttgctaatgggagaactg 35756
>emb|AL031730.1|HS301K23 Human DNA sequence from clone RP1-301K23 on chromosome 1p35.1-36.21 Contains part of the gene for a novel protein (LOC255104) (FLJ45636), complete sequence Length = 48832 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cctccctcatcccctccttcc 42 ||||||||||||||||||||| Sbjct: 42563 cctccctcatcccctccttcc 42543
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 5.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 293 ttctacgagccctccacccgcacgcgcctctccttcgaggccgcc 337 |||| |||| ||||||||||||| ||| |||||||||| ||||| Sbjct: 1857321 ttcttcgaggcctccacccgcacccgcagctccttcgagaccgcc 1857365
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 359 gtgctcaccaccgagaatgcccgcg 383 ||||||||||||||| ||||||||| Sbjct: 334230 gtgctcaccaccgaggatgcccgcg 334206
>gb|AC021631.6|AC021631 Mus musculus, clone RP23-38J11, complete sequence Length = 160618 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 813 gtgatgtaatttatcaaacac 833 ||||||||||||||||||||| Sbjct: 126488 gtgatgtaatttatcaaacac 126468
>ref|XM_956720.1| Neurospora crassa OR74A hypothetical protein (NCU08287.1) partial mRNA Length = 5499 Score = 42.1 bits (21), Expect = 5.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 284 gccacgctcttctacgagccctccacccg 312 ||||| |||||||||||||| |||||||| Sbjct: 4714 gccactctcttctacgagccttccacccg 4742
>emb|AL772271.11| Mouse DNA sequence from clone RP23-17P12 on chromosome 2, complete sequence Length = 204136 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ccctcatcccctccttcccac 45 ||||||||||||||||||||| Sbjct: 52208 ccctcatcccctccttcccac 52188
>gb|AC165364.2| Mus musculus BAC clone RP23-75J20 from chromosome 3, complete sequence Length = 240679 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 tcccctccttcccaccccttc 51 ||||||||||||||||||||| Sbjct: 228503 tcccctccttcccaccccttc 228483
>gb|AC025622.3| Mus musculus chromosome 3, clone RP23-453M11, complete sequence Length = 182338 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 tcccctccttcccaccccttc 51 ||||||||||||||||||||| Sbjct: 68735 tcccctccttcccaccccttc 68715 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 241,507,906 Number of extensions: 12829808 Number of successful extensions: 260747 Number of sequences better than 10.0: 64 Number of HSP's gapped: 260730 Number of HSP's successfully gapped: 115 Length of query: 1341 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1318 Effective length of database: 18,503,978,556 Effective search space: 24388243736808 Effective search space used: 24388243736808 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)