ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf39j08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001068421.1| Oryza sativa (japonica cultivar-group) Os08g... 311 6e-81
2dbj|AK065062.1| Oryza sativa (japonica cultivar-group) cDNA clon... 311 6e-81
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 149 5e-32
4dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic D... 149 5e-32
5gb|AY104515.1| Zea mays PCO140907 mRNA sequence 94 3e-15
6ref|NM_001068082.1| Oryza sativa (japonica cultivar-group) Os08g... 84 2e-12
7dbj|AP004637.3| Oryza sativa (japonica cultivar-group) genomic D... 84 2e-12
8dbj|AP003884.2| Oryza sativa (japonica cultivar-group) genomic D... 84 2e-12
9dbj|AK106729.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 2e-12
10ref|NM_001067478.1| Oryza sativa (japonica cultivar-group) Os08g... 58 1e-04
11dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic D... 58 1e-04
12dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic D... 58 1e-04
13ref|NM_001074345.1| Oryza sativa (japonica cultivar-group) Os11g... 46 0.53
14ref|NM_001067198.1| Oryza sativa (japonica cultivar-group) Os07g... 46 0.53
15gb|CP000450.1| Nitrosomonas eutropha C71, complete genome 46 0.53
16gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.53
17dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.53
18dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.53
19dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic D... 46 0.53
20dbj|AK119786.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.53
21dbj|AK104429.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.53
22dbj|AK104082.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.53
23dbj|AK069955.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.53
24dbj|AK066262.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.53
25gb|CP000382.1| Clostridium novyi NT, complete genome 44 2.1
26dbj|AK232718.1| Sus scrofa mRNA, clone:LVRM10011E07, expressed i... 44 2.1
27emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete se... 44 2.1
28ref|XM_001001226.1| PREDICTED: Mus musculus gene model 659, (NCB... 44 2.1
29gb|AC164562.4| Mus musculus BAC clone RP23-148G12 from chromosom... 44 2.1
30gb|AC122808.3| Mus musculus BAC clone RP23-298M23 from 3, comple... 44 2.1
31gb|AC166343.1| Mus musculus BAC clone RP23-470N9 from chromosome... 44 2.1
32emb|CR974457.17| Mouse DNA sequence from clone RP23-319E15 on ch... 44 2.1
33gb|AF050157.1|MMHC135G15 Mus musculus major histocompatibility l... 44 2.1
34ref|XM_421378.2| PREDICTED: Gallus gallus TNF receptor-associate... 42 8.2
35gb|DQ851321.1| Sparus aurata clone Ct40 microsatellite sequence 42 8.2
36ref|XM_001226950.1| Chaetomium globosum CBS 148.51 hypothetical ... 42 8.2
37ref|NM_001055408.1| Oryza sativa (japonica cultivar-group) Os03g... 42 8.2
38ref|NM_101291.1| Arabidopsis thaliana hydrolase (AT1G14250) mRNA... 42 8.2
39gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome... 42 8.2
40ref|XM_628938.1| Dictyostelium discoideum AX4 hypothetical prote... 42 8.2
41gb|AC112979.9| Mus musculus chromosome 3, clone RP24-530C22, com... 42 8.2
42gb|AC142308.3| Pan troglodytes BAC clone RP43-135J9 from Y, comp... 42 8.2
43gb|BT010550.1| Arabidopsis thaliana At1g14250 gene, complete cds 42 8.2
44gb|AC159975.4| Mus musculus chromosome 3, clone RP24-204F16, com... 42 8.2
45gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete seq... 42 8.2
46gb|AC097516.2| Homo sapiens BAC clone RP11-468A23 from 4, comple... 42 8.2
47dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 8.2
48gb|AC096950.2| Homo sapiens chromosome 1 clone RP4-612J11, compl... 42 8.2
49gb|AC017079.5| Homo sapiens BAC clone RP11-462M9 from 2, complet... 42 8.2
50dbj|AK175519.1| Arabidopsis thaliana mRNA for hypothetical prote... 42 8.2
51dbj|AK175135.1| Arabidopsis thaliana mRNA for hypothetical prote... 42 8.2
52gb|AC092967.5| Homo sapiens 3 BAC RP11-521A24 (Roswell Park Canc... 42 8.2
53dbj|BS000594.1| Pan troglodytes chromosome Y clone:PTB-031N07, c... 42 8.2
54dbj|AK119680.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 8.2
55emb|BX932940.2| Gallus gallus finished cDNA, clone ChEST36n15 42 8.2
56emb|BX821988.1|CNS0A93F Arabidopsis thaliana Full-length cDNA Co... 42 8.2
57dbj|AK063608.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 8.2
58emb|AL663068.12| Mouse DNA sequence from clone RP23-30J5 on chro... 42 8.2 
>ref|NM_001068421.1| Oryza sativa (japonica cultivar-group) Os08g0436100 (Os08g0436100)
            mRNA, complete cds
          Length = 2051
 Score =  311 bits (157), Expect = 6e-81
 Identities = 366/435 (84%), Gaps = 3/435 (0%)
 Strand = Plus / Plus

                                                                        
Query: 986  tgctcatgcggttggtaacttctctgagtgtagatctgtggtgagaacattattgcacaa 1045
            ||||||||| |||||||||||||| || ||||||||||  |    |||| ||||||| ||
Sbjct: 1133 tgctcatgctgttggtaacttctccgaatgtagatctgcagcactaacactattgcagaa 1192

                                                                        
Query: 1046 aggacaagaggaatgtatatatcatgattgtcgtctgggagcagcatttgtaccagatct 1105
            ||||  |||||||||||  || ||||| || ||| |||||||||||||||||||||| ||
Sbjct: 1193 aggaagagaggaatgtaggtaccatgaatgccgtatgggagcagcatttgtaccagacct 1252

                                                                        
Query: 1106 ggaaggaagattcttagcaaccgagaatttctaccatacctcgaagttctttgggctccg 1165
             || || | ||| |||||||| ||||||||||||||||| || ||||||||| || | ||
Sbjct: 1253 tgatgggaaatttttagcaacagagaatttctaccatacttccaagttctttaggttgcg 1312

                                                                        
Query: 1166 ttcgaaatcttttctttctgatttgatgctggctggggagcaattttgccatggggactg 1225
            ||| || ||||||||||||||  ||||||||||||||||| |||||||||  || |||||
Sbjct: 1313 ttctaagtcttttctttctgacctgatgctggctggggagaaattttgccgaggagactg 1372

                                                                        
Query: 1226 gtcatcaaacataaaaaggaagtaccgttctttcaatgagggggaactgctccttttttg 1285
            ||||   || || |||| | ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1373 gtca---aagattaaaaaggagtaccgttctttcaatgagggggagctgcttcttttttg 1429

                                                                        
Query: 1286 cttctcctcagcgtatattgtggccttactgcatgatgctctaaaagtgcccatggatca 1345
            ||| |||||||| |||||||| || || ||||||||| ||||||| || ||  ||||| |
Sbjct: 1430 cttttcctcagcatatattgttgctttgctgcatgatactctaaaggtcccgctggatga 1489

                                                                        
Query: 1346 taatagcattgatgttacaaataaaattcggggtatgccagttgactgggcattgggcgc 1405
            ||| || ||||||||| | ||| ||||| | ||| |||| ||||||||||||||||| ||
Sbjct: 1490 taagaggattgatgttgcgaatcaaattggcggtgtgcctgttgactgggcattgggtgc 1549

                           
Query: 1406 tttcattgtgcagaa 1420
            |||||||||||||||
Sbjct: 1550 tttcattgtgcagaa 1564



 Score =  246 bits (124), Expect = 3e-61
 Identities = 361/440 (82%)
 Strand = Plus / Plus

                                                                        
Query: 538  tgcttcgggggtcagggttccgtttccaggatcagtgggccactattatctcaggagctg 597
            |||| ||||| || |||||||  ||||||||  | ||||||||  | |||||||||||||
Sbjct: 676  tgctgcggggatcggggttccagttccaggacgattgggccaccgtgatctcaggagctg 735

                                                                        
Query: 598  atgaagggatttatgcatgggttgcggcaaattatgcattgggtactctcggtggtgcta 657
            | |||||||| ||||||||| |||| |||||||||||  ||||||| || || | ||   
Sbjct: 736  aggaagggatgtatgcatggattgcagcaaattatgcgctgggtaccctaggcgatgact 795

                                                                        
Query: 658  gacaagatactactgggataattgagcttggcggggcttctattcaggtaacgttcgcta 717
             |||||||||||| ||||||||||||||||| || |||||  |||||||||| || | ||
Sbjct: 796  cacaagatactacggggataattgagcttggtggagcttccgttcaggtaacttttgtta 855

                                                                        
Query: 718  ccgataaacctatgcctcaggagttctcccacgtgctcaagttcggcgatatcacatata 777
            | || |||||| ||||||  |||||||| ||    || |||||||| |||  ||||||||
Sbjct: 856  cggacaaacctttgcctccagagttctctcatactctgaagttcggtgatgccacatata 915

                                                                        
Query: 778  acctgtacagccacagttttctacatcttggtcagaatgtagcatatgaatcacttcatg 837
            | |||||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||
Sbjct: 916  atctgtacagtcacagctttctacaacttggtcagaatgttgcgtacgaatcactccatg 975

                                                                        
Query: 838  atttgttgagcacacctgcccttgaatcaatgtccacacatttaattcatcaagctacat 897
            |  || ||||||||||||  | | |||||||| | ||||||||||||  ||||||||  |
Sbjct: 976  acatgctgagcacacctgggcataaatcaatggcaacacatttaatttctcaagctaagt 1035

                                                                        
Query: 898  acaaagatccttgcaccccaaagggattttcgcgcatggtgggactagttaaacctcttg 957
            ||| |||||||||||| |||| ||||||||||| ||||| ||||  |||||||| || ||
Sbjct: 1036 acagagatccttgcactccaaggggattttcgcccatggagggagcagttaaacttcctg 1095

                                
Query: 958  ctagtgttctcgagtcgaag 977
            | |||||||| |||||||||
Sbjct: 1096 ccagtgttcttgagtcgaag 1115



 Score = 85.7 bits (43), Expect = 6e-13
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                              
Query: 241 tcgttatcgacgccggcagcacggggagccgcgtccacgtcatcgcctacc 291
           |||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 361 tcgtcatcgacgccggtagcacggggagccgcgtccacgtcatcgcctacc 411



 Score = 65.9 bits (33), Expect = 6e-07
 Identities = 97/119 (81%), Gaps = 7/119 (5%)
 Strand = Plus / Plus

                                                                        
Query: 1532 tgctccatcctgaagtggagaagatcttgcctcaagacagtataggacatggagattgga 1591
            ||||||||||||| | ||||||||||| |||| ||||| ||||| ||||       ||||
Sbjct: 1585 tgctccatcctgagggggagaagatctcgcctgaagacggtatacgaca-------tgga 1637

                                                                       
Query: 1592 gagaggccggcacatgataacaagggtcaaccgatgagccttgcgcctggtcgctggga 1650
            || ||||||| |||| ||||| ||||| |  ||||||||||||||| | ||||||||||
Sbjct: 1638 gaaaggccggtacatcataaccagggtgagacgatgagccttgcgcgtcgtcgctggga 1696
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>dbj|AK065062.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J16, full
            insert sequence
          Length = 2052

 Score =  311 bits (157), Expect = 6e-81
 Identities = 366/435 (84%), Gaps = 3/435 (0%)
 Strand = Plus / Plus

                                                                        
Query: 986  tgctcatgcggttggtaacttctctgagtgtagatctgtggtgagaacattattgcacaa 1045
            ||||||||| |||||||||||||| || ||||||||||  |    |||| ||||||| ||
Sbjct: 1134 tgctcatgctgttggtaacttctccgaatgtagatctgcagcactaacactattgcagaa 1193

                                                                        
Query: 1046 aggacaagaggaatgtatatatcatgattgtcgtctgggagcagcatttgtaccagatct 1105
            ||||  |||||||||||  || ||||| || ||| |||||||||||||||||||||| ||
Sbjct: 1194 aggaagagaggaatgtaggtaccatgaatgccgtatgggagcagcatttgtaccagacct 1253

                                                                        
Query: 1106 ggaaggaagattcttagcaaccgagaatttctaccatacctcgaagttctttgggctccg 1165
             || || | ||| |||||||| ||||||||||||||||| || ||||||||| || | ||
Sbjct: 1254 tgatgggaaatttttagcaacagagaatttctaccatacttccaagttctttaggttgcg 1313

                                                                        
Query: 1166 ttcgaaatcttttctttctgatttgatgctggctggggagcaattttgccatggggactg 1225
            ||| || ||||||||||||||  ||||||||||||||||| |||||||||  || |||||
Sbjct: 1314 ttctaagtcttttctttctgacctgatgctggctggggagaaattttgccgaggagactg 1373

                                                                        
Query: 1226 gtcatcaaacataaaaaggaagtaccgttctttcaatgagggggaactgctccttttttg 1285
            ||||   || || |||| | ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1374 gtca---aagattaaaaaggagtaccgttctttcaatgagggggagctgcttcttttttg 1430

                                                                        
Query: 1286 cttctcctcagcgtatattgtggccttactgcatgatgctctaaaagtgcccatggatca 1345
            ||| |||||||| |||||||| || || ||||||||| ||||||| || ||  ||||| |
Sbjct: 1431 cttttcctcagcatatattgttgctttgctgcatgatactctaaaggtcccgctggatga 1490

                                                                        
Query: 1346 taatagcattgatgttacaaataaaattcggggtatgccagttgactgggcattgggcgc 1405
            ||| || ||||||||| | ||| ||||| | ||| |||| ||||||||||||||||| ||
Sbjct: 1491 taagaggattgatgttgcgaatcaaattggcggtgtgcctgttgactgggcattgggtgc 1550

                           
Query: 1406 tttcattgtgcagaa 1420
            |||||||||||||||
Sbjct: 1551 tttcattgtgcagaa 1565



 Score =  246 bits (124), Expect = 3e-61
 Identities = 361/440 (82%)
 Strand = Plus / Plus

                                                                        
Query: 538  tgcttcgggggtcagggttccgtttccaggatcagtgggccactattatctcaggagctg 597
            |||| ||||| || |||||||  ||||||||  | ||||||||  | |||||||||||||
Sbjct: 677  tgctgcggggatcggggttccagttccaggacgattgggccaccgtgatctcaggagctg 736

                                                                        
Query: 598  atgaagggatttatgcatgggttgcggcaaattatgcattgggtactctcggtggtgcta 657
            | |||||||| ||||||||| |||| |||||||||||  ||||||| || || | ||   
Sbjct: 737  aggaagggatgtatgcatggattgcagcaaattatgcgctgggtaccctaggcgatgact 796

                                                                        
Query: 658  gacaagatactactgggataattgagcttggcggggcttctattcaggtaacgttcgcta 717
             |||||||||||| ||||||||||||||||| || |||||  |||||||||| || | ||
Sbjct: 797  cacaagatactacggggataattgagcttggtggagcttccgttcaggtaacttttgtta 856

                                                                        
Query: 718  ccgataaacctatgcctcaggagttctcccacgtgctcaagttcggcgatatcacatata 777
            | || |||||| ||||||  |||||||| ||    || |||||||| |||  ||||||||
Sbjct: 857  cggacaaacctttgcctccagagttctctcatactctgaagttcggtgatgccacatata 916

                                                                        
Query: 778  acctgtacagccacagttttctacatcttggtcagaatgtagcatatgaatcacttcatg 837
            | |||||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||
Sbjct: 917  atctgtacagtcacagctttctacaacttggtcagaatgttgcgtacgaatcactccatg 976

                                                                        
Query: 838  atttgttgagcacacctgcccttgaatcaatgtccacacatttaattcatcaagctacat 897
            |  || ||||||||||||  | | |||||||| | ||||||||||||  ||||||||  |
Sbjct: 977  acatgctgagcacacctgggcataaatcaatggcaacacatttaatttctcaagctaagt 1036

                                                                        
Query: 898  acaaagatccttgcaccccaaagggattttcgcgcatggtgggactagttaaacctcttg 957
            ||| |||||||||||| |||| ||||||||||| ||||| ||||  |||||||| || ||
Sbjct: 1037 acagagatccttgcactccaaggggattttcgcccatggagggagcagttaaacttcctg 1096

                                
Query: 958  ctagtgttctcgagtcgaag 977
            | |||||||| |||||||||
Sbjct: 1097 ccagtgttcttgagtcgaag 1116



 Score = 85.7 bits (43), Expect = 6e-13
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                              
Query: 241 tcgttatcgacgccggcagcacggggagccgcgtccacgtcatcgcctacc 291
           |||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 362 tcgtcatcgacgccggtagcacggggagccgcgtccacgtcatcgcctacc 412



 Score = 65.9 bits (33), Expect = 6e-07
 Identities = 97/119 (81%), Gaps = 7/119 (5%)
 Strand = Plus / Plus

                                                                        
Query: 1532 tgctccatcctgaagtggagaagatcttgcctcaagacagtataggacatggagattgga 1591
            ||||||||||||| | ||||||||||| |||| ||||| ||||| ||||       ||||
Sbjct: 1586 tgctccatcctgagggggagaagatctcgcctgaagacggtatacgaca-------tgga 1638

                                                                       
Query: 1592 gagaggccggcacatgataacaagggtcaaccgatgagccttgcgcctggtcgctggga 1650
            || ||||||| |||| ||||| ||||| |  ||||||||||||||| | ||||||||||
Sbjct: 1639 gaaaggccggtacatcataaccagggtgagacgatgagccttgcgcgtcgtcgctggga 1697
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score =  149 bits (75), Expect = 5e-32
 Identities = 155/181 (85%), Gaps = 3/181 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1150     agttctttgggctccgttcgaaatcttttctttctgatttgatgctggctggggagcaat 1209
                |||||||| || | ||||| || ||||||||||||||  ||||||||||||||||| |||
Sbjct: 21186131 agttctttaggttgcgttctaagtcttttctttctgacctgatgctggctggggagaaat 21186190

                                                                            
Query: 1210     tttgccatggggactggtcatcaaacataaaaaggaagtaccgttctttcaatgaggggg 1269
                ||||||  || |||||||||   || || |||| | ||||||||||||||||||||||||
Sbjct: 21186191 tttgccgaggagactggtca---aagattaaaaaggagtaccgttctttcaatgaggggg 21186247

                                                                            
Query: 1270     aactgctccttttttgcttctcctcagcgtatattgtggccttactgcatgatgctctaa 1329
                | ||||| ||||||||||| |||||||| |||||||| || || ||||||||| ||||||
Sbjct: 21186248 agctgcttcttttttgcttttcctcagcatatattgttgctttgctgcatgatactctaa 21186307

                 
Query: 1330     a 1330
                |
Sbjct: 21186308 a 21186308



 Score = 89.7 bits (45), Expect = 4e-14
 Identities = 90/105 (85%)
 Strand = Plus / Plus

                                                                            
Query: 873      acacatttaattcatcaagctacatacaaagatccttgcaccccaaagggattttcgcgc 932
                ||||||||||||  ||||||||  |||| |||||||||||| |||| ||||||||||| |
Sbjct: 21184687 acacatttaatttctcaagctaagtacagagatccttgcactccaaggggattttcgccc 21184746

                                                             
Query: 933      atggtgggactagttaaacctcttgctagtgttctcgagtcgaag 977
                |||| ||||  |||||||| || ||| |||||||| |||||||||
Sbjct: 21184747 atggagggagcagttaaacttcctgccagtgttcttgagtcgaag 21184791



 Score = 89.7 bits (45), Expect = 4e-14
 Identities = 236/299 (78%), Gaps = 8/299 (2%)
 Strand = Plus / Plus

                                                                            
Query: 1353     attgatgttacaaataaaattcggggtatgccagttgactgggcattgggcgctttcatt 1412
                ||||||||| | ||| ||||| | ||| |||| ||||||||||||||||| |||||||||
Sbjct: 21186409 attgatgttgcgaatcaaattggcggtgtgcctgttgactgggcattgggtgctttcatt 21186468

                                                                            
Query: 1413     gtgcagaaaaact-aaatcggacagagtacttggtcccatcagtttgatatctaaactac 1471
                ||||||||    | ||| | |||||||||||  |   ||||||||  ||||||||||  |
Sbjct: 21186469 gtgcagaaggcgtcaaaccagacagagtactcagattcatcagttccatatctaaacagc 21186528

                                                                            
Query: 1472     tacgacttttctgggttggtgccacttatcttcatcactaccgttgtcatatttacattg 1531
                ||  ||| |||||||||||| |||||  |||||||  |  | || ||  ||||||||   
Sbjct: 21186529 tattactattctgggttggttccactcctcttcatttccgctgtcgttctatttacagca 21186588

                                                                            
Query: 1532     tgctccatcctgaagtggagaagatcttgcctcaagacagtataggacatggagattgga 1591
                ||||||||||||| | ||||||||||| |||| ||||| ||||| ||||       ||||
Sbjct: 21186589 tgctccatcctgagggggagaagatctcgcctgaagacggtatacgaca-------tgga 21186641

                                                                           
Query: 1592     gagaggccggcacatgataacaagggtcaaccgatgagccttgcgcctggtcgctggga 1650
                || ||||||| |||| ||||| ||||| |  ||||||||||||||| | ||||||||||
Sbjct: 21186642 gaaaggccggtacatcataaccagggtgagacgatgagccttgcgcgtcgtcgctggga 21186700



 Score = 85.7 bits (43), Expect = 6e-13
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                                   
Query: 241      tcgttatcgacgccggcagcacggggagccgcgtccacgtcatcgcctacc 291
                |||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 21183344 tcgtcatcgacgccggtagcacggggagccgcgtccacgtcatcgcctacc 21183394



 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                          
Query: 234      tatggcatcgttatcgacgccggcagcacggggagccgcgtccacgtcatcgcctacc 291
                |||||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 14312976 tatggcgtcgtcatcgacgccggtagcacgaggagccgcgtccacgtcatcgcctacc 14313033



 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 99/118 (83%)
 Strand = Plus / Plus

                                                                            
Query: 589      caggagctgatgaagggatttatgcatgggttgcggcaaattatgcattgggtactctcg 648
                |||||||||| |||||||| ||||||||| |||| |||||||||||  ||||||| || |
Sbjct: 21183950 caggagctgaggaagggatgtatgcatggattgcagcaaattatgcgctgggtaccctag 21184009

                                                                          
Query: 649      gtggtgctagacaagatactactgggataattgagcttggcggggcttctattcaggt 706
                | | ||    |||||||||||| ||||||||||||||||| || |||||  |||||||
Sbjct: 21184010 gcgatgactcacaagatactacggggataattgagcttggtggagcttccgttcaggt 21184067



 Score = 81.8 bits (41), Expect = 1e-11
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                            
Query: 1052     agaggaatgtatatatcatgattgtcgtctgggagcagcatttgtaccagatctggaagg 1111
                |||||||||||  || ||||| || ||| |||||||||||||||||||||| || || ||
Sbjct: 21185289 agaggaatgtaggtaccatgaatgccgtatgggagcagcatttgtaccagaccttgatgg 21185348

                                                 
Query: 1112     aagattcttagcaaccgagaatttctaccatac 1144
                 | ||| |||||||| |||||||||||||||||
Sbjct: 21185349 gaaatttttagcaacagagaatttctaccatac 21185381



 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                        
Query: 251     cgccggcagcacggggagccgcgtccacgtcatcgcctacc 291
               |||||| |||||| |||||||||||||||||||| ||||||
Sbjct: 2009973 cgccggtagcacgaggagccgcgtccacgtcatcacctacc 2009933



 Score = 52.0 bits (26), Expect = 0.009
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 986      tgctcatgcggttggtaacttctctgagtgtagatctg 1023
                ||||||||| |||||||||||||| || ||||||||||
Sbjct: 21184809 tgctcatgctgttggtaacttctccgaatgtagatctg 21184846



 Score = 42.1 bits (21), Expect = 8.2
 Identities = 123/157 (78%)
 Strand = Plus / Plus

                                                                            
Query: 337      tgaaggccaccccggggctatcctcgttcgcagccgacccaggcagcgggggcctgtcga 396
                |||||||  |||||||||| || || |||||  ||||||| ||| ||| ||||| |||| 
Sbjct: 21183458 tgaaggcggccccggggctgtcgtccttcgcctccgacccgggcggcgcgggccggtcgc 21183517

                                                                            
Query: 397      tcgccccgctgttggagttcgcaaggcggcacgtgccgcgggatagttgggttcacaccg 456
                | || |||||  ||||||||||  | || | |||||||| ||| || ||||   | ||||
Sbjct: 21183518 tggcgccgctcctggagttcgcgcgccgccgcgtgccgccggagagctgggcggagaccg 21183577

                                                     
Query: 457      aggtgcgactcatggccacggccggactccgtctgct 493
                | ||||| ||||||||||| || || ||||| |||||
Sbjct: 21183578 acgtgcgcctcatggccaccgcggggctccggctgct 21183614
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>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0016C11
          Length = 170723

 Score =  149 bits (75), Expect = 5e-32
 Identities = 155/181 (85%), Gaps = 3/181 (1%)
 Strand = Plus / Plus

                                                                         
Query: 1150  agttctttgggctccgttcgaaatcttttctttctgatttgatgctggctggggagcaat 1209
             |||||||| || | ||||| || ||||||||||||||  ||||||||||||||||| |||
Sbjct: 12408 agttctttaggttgcgttctaagtcttttctttctgacctgatgctggctggggagaaat 12467

                                                                         
Query: 1210  tttgccatggggactggtcatcaaacataaaaaggaagtaccgttctttcaatgaggggg 1269
             ||||||  || |||||||||   || || |||| | ||||||||||||||||||||||||
Sbjct: 12468 tttgccgaggagactggtca---aagattaaaaaggagtaccgttctttcaatgaggggg 12524

                                                                         
Query: 1270  aactgctccttttttgcttctcctcagcgtatattgtggccttactgcatgatgctctaa 1329
             | ||||| ||||||||||| |||||||| |||||||| || || ||||||||| ||||||
Sbjct: 12525 agctgcttcttttttgcttttcctcagcatatattgttgctttgctgcatgatactctaa 12584

              
Query: 1330  a 1330
             |
Sbjct: 12585 a 12585



 Score = 89.7 bits (45), Expect = 4e-14
 Identities = 90/105 (85%)
 Strand = Plus / Plus

                                                                         
Query: 873   acacatttaattcatcaagctacatacaaagatccttgcaccccaaagggattttcgcgc 932
             ||||||||||||  ||||||||  |||| |||||||||||| |||| ||||||||||| |
Sbjct: 10964 acacatttaatttctcaagctaagtacagagatccttgcactccaaggggattttcgccc 11023

                                                          
Query: 933   atggtgggactagttaaacctcttgctagtgttctcgagtcgaag 977
             |||| ||||  |||||||| || ||| |||||||| |||||||||
Sbjct: 11024 atggagggagcagttaaacttcctgccagtgttcttgagtcgaag 11068



 Score = 89.7 bits (45), Expect = 4e-14
 Identities = 236/299 (78%), Gaps = 8/299 (2%)
 Strand = Plus / Plus

                                                                         
Query: 1353  attgatgttacaaataaaattcggggtatgccagttgactgggcattgggcgctttcatt 1412
             ||||||||| | ||| ||||| | ||| |||| ||||||||||||||||| |||||||||
Sbjct: 12686 attgatgttgcgaatcaaattggcggtgtgcctgttgactgggcattgggtgctttcatt 12745

                                                                         
Query: 1413  gtgcagaaaaact-aaatcggacagagtacttggtcccatcagtttgatatctaaactac 1471
             ||||||||    | ||| | |||||||||||  |   ||||||||  ||||||||||  |
Sbjct: 12746 gtgcagaaggcgtcaaaccagacagagtactcagattcatcagttccatatctaaacagc 12805

                                                                         
Query: 1472  tacgacttttctgggttggtgccacttatcttcatcactaccgttgtcatatttacattg 1531
             ||  ||| |||||||||||| |||||  |||||||  |  | || ||  ||||||||   
Sbjct: 12806 tattactattctgggttggttccactcctcttcatttccgctgtcgttctatttacagca 12865

                                                                         
Query: 1532  tgctccatcctgaagtggagaagatcttgcctcaagacagtataggacatggagattgga 1591
             ||||||||||||| | ||||||||||| |||| ||||| ||||| ||||       ||||
Sbjct: 12866 tgctccatcctgagggggagaagatctcgcctgaagacggtatacgaca-------tgga 12918

                                                                        
Query: 1592  gagaggccggcacatgataacaagggtcaaccgatgagccttgcgcctggtcgctggga 1650
             || ||||||| |||| ||||| ||||| |  ||||||||||||||| | ||||||||||
Sbjct: 12919 gaaaggccggtacatcataaccagggtgagacgatgagccttgcgcgtcgtcgctggga 12977



 Score = 85.7 bits (43), Expect = 6e-13
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                               
Query: 241  tcgttatcgacgccggcagcacggggagccgcgtccacgtcatcgcctacc 291
            |||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 9621 tcgtcatcgacgccggtagcacggggagccgcgtccacgtcatcgcctacc 9671



 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 99/118 (83%)
 Strand = Plus / Plus

                                                                         
Query: 589   caggagctgatgaagggatttatgcatgggttgcggcaaattatgcattgggtactctcg 648
             |||||||||| |||||||| ||||||||| |||| |||||||||||  ||||||| || |
Sbjct: 10227 caggagctgaggaagggatgtatgcatggattgcagcaaattatgcgctgggtaccctag 10286

                                                                       
Query: 649   gtggtgctagacaagatactactgggataattgagcttggcggggcttctattcaggt 706
             | | ||    |||||||||||| ||||||||||||||||| || |||||  |||||||
Sbjct: 10287 gcgatgactcacaagatactacggggataattgagcttggtggagcttccgttcaggt 10344



 Score = 81.8 bits (41), Expect = 1e-11
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                         
Query: 1052  agaggaatgtatatatcatgattgtcgtctgggagcagcatttgtaccagatctggaagg 1111
             |||||||||||  || ||||| || ||| |||||||||||||||||||||| || || ||
Sbjct: 11566 agaggaatgtaggtaccatgaatgccgtatgggagcagcatttgtaccagaccttgatgg 11625

                                              
Query: 1112  aagattcttagcaaccgagaatttctaccatac 1144
              | ||| |||||||| |||||||||||||||||
Sbjct: 11626 gaaatttttagcaacagagaatttctaccatac 11658



 Score = 52.0 bits (26), Expect = 0.009
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 986   tgctcatgcggttggtaacttctctgagtgtagatctg 1023
             ||||||||| |||||||||||||| || ||||||||||
Sbjct: 11086 tgctcatgctgttggtaacttctccgaatgtagatctg 11123



 Score = 42.1 bits (21), Expect = 8.2
 Identities = 123/157 (78%)
 Strand = Plus / Plus

                                                                        
Query: 337  tgaaggccaccccggggctatcctcgttcgcagccgacccaggcagcgggggcctgtcga 396
            |||||||  |||||||||| || || |||||  ||||||| ||| ||| ||||| |||| 
Sbjct: 9735 tgaaggcggccccggggctgtcgtccttcgcctccgacccgggcggcgcgggccggtcgc 9794

                                                                        
Query: 397  tcgccccgctgttggagttcgcaaggcggcacgtgccgcgggatagttgggttcacaccg 456
            | || |||||  ||||||||||  | || | |||||||| ||| || ||||   | ||||
Sbjct: 9795 tggcgccgctcctggagttcgcgcgccgccgcgtgccgccggagagctgggcggagaccg 9854

                                                 
Query: 457  aggtgcgactcatggccacggccggactccgtctgct 493
            | ||||| ||||||||||| || || ||||| |||||
Sbjct: 9855 acgtgcgcctcatggccaccgcggggctccggctgct 9891
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>gb|AY104515.1| Zea mays PCO140907 mRNA sequence
          Length = 706

 Score = 93.7 bits (47), Expect = 3e-15
 Identities = 143/175 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1245 aagtaccgttctttcaatgagggggaactgctccttttttgcttctcctcagcgtatatt 1304
            |||||| |||||||  |||| ||  ||||||| ||||||||||| |||||||| ||||||
Sbjct: 17   aagtacagttcttttgatgacggacaactgcttcttttttgcttttcctcagcatatatt 76

                                                                        
Query: 1305 gtggccttactgcatgatgctctaaaagtgcccatggatcataatagcattgatgttaca 1364
             | ||  ||||||||||| | || ||| ||||  |||||||||| || |||||||||  |
Sbjct: 77   attgctctactgcatgatacgcttaaaatgccactggatcataaaaggattgatgttgta 136

                                                                   
Query: 1365 aataaaattcggggtatgccagttgactgggcattgggcgctttcattgtgcaga 1419
            ||  |||| |  ||  |||| ||||||||||||||||| ||||||||||||||||
Sbjct: 137  aaccaaatccatggcgtgcctgttgactgggcattgggtgctttcattgtgcaga 191
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>ref|NM_001068082.1| Oryza sativa (japonica cultivar-group) Os08g0326000 (Os08g0326000)
           mRNA, complete cds
          Length = 804

 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                     
Query: 234 tatggcatcgttatcgacgccggcagcacggggagccgcgtccacgtcatcgcctacc 291
           |||||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 270 tatggcgtcgtcatcgacgccggtagcacgaggagccgcgtccacgtcatcgcctacc 327
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>dbj|AP004637.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0703C03
          Length = 162620

 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                        
Query: 234    tatggcatcgttatcgacgccggcagcacggggagccgcgtccacgtcatcgcctacc 291
              |||||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 128532 tatggcgtcgtcatcgacgccggtagcacgaggagccgcgtccacgtcatcgcctacc 128589
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>dbj|AP003884.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1136_A10
          Length = 101249

 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                       
Query: 234   tatggcatcgttatcgacgccggcagcacggggagccgcgtccacgtcatcgcctacc 291
             |||||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 16056 tatggcgtcgtcatcgacgccggtagcacgaggagccgcgtccacgtcatcgcctacc 16113
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>dbj|AK106729.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-H08, full
           insert sequence
          Length = 804

 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                     
Query: 234 tatggcatcgttatcgacgccggcagcacggggagccgcgtccacgtcatcgcctacc 291
           |||||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 270 tatggcgtcgtcatcgacgccggtagcacgaggagccgcgtccacgtcatcgcctacc 327
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>ref|NM_001067478.1| Oryza sativa (japonica cultivar-group) Os08g0135600 (Os08g0135600)
           mRNA, complete cds
          Length = 1572

 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 251 cgccggcagcacggggagccgcgtccacgtcatcgcctacc 291
           |||||| |||||| |||||||||||||||||||| ||||||
Sbjct: 552 cgccggtagcacgaggagccgcgtccacgtcatcacctacc 592
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>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1613_G04
          Length = 135357

 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 251  cgccggcagcacggggagccgcgtccacgtcatcgcctacc 291
            |||||| |||||| |||||||||||||||||||| ||||||
Sbjct: 3503 cgccggtagcacgaggagccgcgtccacgtcatcacctacc 3463
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>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0680F05
          Length = 185495

 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                       
Query: 251    cgccggcagcacggggagccgcgtccacgtcatcgcctacc 291
              |||||| |||||| |||||||||||||||||||| ||||||
Sbjct: 135171 cgccggtagcacgaggagccgcgtccacgtcatcacctacc 135131
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>ref|NM_001074345.1| Oryza sativa (japonica cultivar-group) Os11g0439600 (Os11g0439600)
           mRNA, complete cds
          Length = 1690

 Score = 46.1 bits (23), Expect = 0.53
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 247 tcgacgccggcagcacggggagccgcgtccacgtc 281
           |||||||||||||||| |||||||| || ||||||
Sbjct: 332 tcgacgccggcagcaccgggagccgggttcacgtc 366
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>ref|NM_001067198.1| Oryza sativa (japonica cultivar-group) Os07g0682800 (Os07g0682800)
           mRNA, complete cds
          Length = 2037

 Score = 46.1 bits (23), Expect = 0.53
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 247 tcgacgccggcagcacggggagccgcgtccacgtc 281
           |||||||||| ||| | ||||||||||||||||||
Sbjct: 543 tcgacgccgggagctccgggagccgcgtccacgtc 577
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>gb|CP000450.1| Nitrosomonas eutropha C71, complete genome
          Length = 2661057

 Score = 46.1 bits (23), Expect = 0.53
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 1346    taatagcattgatgttacaaataaaat 1372
               ||||| |||||||||||||||||||||
Sbjct: 1317152 taatatcattgatgttacaaataaaat 1317126
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>gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0096A19 map near 50283S, complete sequence
          Length = 139969

 Score = 46.1 bits (23), Expect = 0.53
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 247   tcgacgccggcagcacggggagccgcgtccacgtc 281
             |||||||||||||||| |||||||| || ||||||
Sbjct: 57360 tcgacgccggcagcaccgggagccgggttcacgtc 57326
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.53
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 247      tcgacgccggcagcacggggagccgcgtccacgtc 281
                |||||||||||||||| |||||||| || ||||||
Sbjct: 13819801 tcgacgccggcagcaccgggagccgggttcacgtc 13819767
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.53
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 247      tcgacgccggcagcacggggagccgcgtccacgtc 281
                |||||||||| ||| | ||||||||||||||||||
Sbjct: 28910107 tcgacgccgggagctccgggagccgcgtccacgtc 28910141
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>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0060O17
          Length = 180015

 Score = 46.1 bits (23), Expect = 0.53
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 247   tcgacgccggcagcacggggagccgcgtccacgtc 281
             |||||||||| ||| | ||||||||||||||||||
Sbjct: 27644 tcgacgccgggagctccgggagccgcgtccacgtc 27678
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>dbj|AK119786.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F08, full
           insert sequence
          Length = 1689

 Score = 46.1 bits (23), Expect = 0.53
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 247 tcgacgccggcagcacggggagccgcgtccacgtc 281
           |||||||||||||||| |||||||| || ||||||
Sbjct: 331 tcgacgccggcagcaccgggagccgggttcacgtc 365
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>dbj|AK104429.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C10, full
           insert sequence
          Length = 1686

 Score = 46.1 bits (23), Expect = 0.53
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 247 tcgacgccggcagcacggggagccgcgtccacgtc 281
           |||||||||||||||| |||||||| || ||||||
Sbjct: 328 tcgacgccggcagcaccgggagccgggttcacgtc 362
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>dbj|AK104082.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C02, full
           insert sequence
          Length = 1686

 Score = 46.1 bits (23), Expect = 0.53
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 247 tcgacgccggcagcacggggagccgcgtccacgtc 281
           |||||||||||||||| |||||||| || ||||||
Sbjct: 328 tcgacgccggcagcaccgggagccgggttcacgtc 362
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>dbj|AK069955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036G10, full
           insert sequence
          Length = 1691

 Score = 46.1 bits (23), Expect = 0.53
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 247 tcgacgccggcagcacggggagccgcgtccacgtc 281
           |||||||||||||||| |||||||| || ||||||
Sbjct: 333 tcgacgccggcagcaccgggagccgggttcacgtc 367
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>dbj|AK066262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059O11, full
           insert sequence
          Length = 2038

 Score = 46.1 bits (23), Expect = 0.53
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 247 tcgacgccggcagcacggggagccgcgtccacgtc 281
           |||||||||| ||| | ||||||||||||||||||
Sbjct: 544 tcgacgccgggagctccgggagccgcgtccacgtc 578
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>gb|CP000382.1| Clostridium novyi NT, complete genome
          Length = 2547720

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 2022    atgtttatatcatgtctgtata 2043
               ||||||||||||||||||||||
Sbjct: 1698417 atgtttatatcatgtctgtata 1698396
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>dbj|AK232718.1| Sus scrofa mRNA, clone:LVRM10011E07, expressed in liver
          Length = 738

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 141 cgcagcagccgccgccacctcgccgg 166
           |||||| |||||||||||||||||||
Sbjct: 42  cgcagcggccgccgccacctcgccgg 67
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>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence
          Length = 7497934

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 278     cgtcatcgcctaccacgccggc 299
               ||||||||||||||||||||||
Sbjct: 1911321 cgtcatcgcctaccacgccggc 1911300



 Score = 42.1 bits (21), Expect = 8.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 157     acctcgccggtgctgtcgtgttcct 181
               ||||||||||||| |||||||||||
Sbjct: 3389204 acctcgccggtgccgtcgtgttcct 3389180
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>ref|XM_001001226.1| PREDICTED: Mus musculus gene model 659, (NCBI) (LOC271944), mRNA
          Length = 1310

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 138 tcacgcagcagccgccgccacc 159
           ||||||||||||||||||||||
Sbjct: 916 tcacgcagcagccgccgccacc 895
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>gb|AC164562.4| Mus musculus BAC clone RP23-148G12 from chromosome 3, complete sequence
          Length = 202591

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 138    tcacgcagcagccgccgccacc 159
              ||||||||||||||||||||||
Sbjct: 165253 tcacgcagcagccgccgccacc 165232
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>gb|AC122808.3| Mus musculus BAC clone RP23-298M23 from 3, complete sequence
          Length = 190130

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 138    tcacgcagcagccgccgccacc 159
              ||||||||||||||||||||||
Sbjct: 172480 tcacgcagcagccgccgccacc 172501
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>gb|AC166343.1| Mus musculus BAC clone RP23-470N9 from chromosome 9, complete sequence
          Length = 191957

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 661    aagatactactgggataattga 682
              ||||||||||||||||||||||
Sbjct: 164809 aagatactactgggataattga 164830
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>emb|CR974457.17| Mouse DNA sequence from clone RP23-319E15 on chromosome 17, complete
              sequence
          Length = 124639

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 2086   tggaaattgctctgttaataat 2107
              ||||||||||||||||||||||
Sbjct: 111141 tggaaattgctctgttaataat 111162
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>gb|AF050157.1|MMHC135G15 Mus musculus major histocompatibility locus class II region: major
              histocompatibility protein class II alpha chain (IAalpha)
              and major histocompatibility protein class II beta chain
              (IEbeta) genes, complete cds; butyrophilin-like (NG9),
              butyrophilin-like (NG10), hypothetical protein (NG8), and
              butyrophilin-like (NG11) genes, partial cds; NG12
              pseudogene, partial sequence; and hypothetical
              butyrophilin-like protein (NG13) gene, partial cds
          Length = 245439

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 2086   tggaaattgctctgttaataat 2107
              ||||||||||||||||||||||
Sbjct: 152317 tggaaattgctctgttaataat 152338
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>ref|XM_421378.2| PREDICTED: Gallus gallus TNF receptor-associated factor 3 (TRAF3),
            mRNA
          Length = 2419

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1830 acatgctgcactgctgagctg 1850
            |||||||||||||||||||||
Sbjct: 963  acatgctgcactgctgagctg 943
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>gb|DQ851321.1| Sparus aurata clone Ct40 microsatellite sequence
          Length = 335

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 1010 tgagtgtagatctgtggtgagaaca 1034
            |||||||| ||||||||||||||||
Sbjct: 247  tgagtgtatatctgtggtgagaaca 223
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>ref|XM_001226950.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_09024)
           mRNA, complete cds
          Length = 2505

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 203 cctcttcctcccccgctcgtc 223
           |||||||||||||||||||||
Sbjct: 495 cctcttcctcccccgctcgtc 475
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>ref|NM_001055408.1| Oryza sativa (japonica cultivar-group) Os03g0133100 (Os03g0133100)
            mRNA, complete cds
          Length = 696

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1330 aagtgcccatggatcataata 1350
            |||||||||||||||||||||
Sbjct: 645  aagtgcccatggatcataata 665
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>ref|NM_101291.1| Arabidopsis thaliana hydrolase (AT1G14250) mRNA, complete cds
          Length = 1467

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 1108 aaggaagattcttagcaaccgagaatttctaccatacctcgaagttctttggg 1160
            ||||||| || || ||||| |||||||||| ||| || || ||||||||||||
Sbjct: 1094 aaggaagttttttggcaacagagaatttcttccacacatccaagttctttggg 1146
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>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08,
             complete sequence
          Length = 138054

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1330  aagtgcccatggatcataata 1350
             |||||||||||||||||||||
Sbjct: 76761 aagtgcccatggatcataata 76781
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>ref|XM_628938.1| Dictyostelium discoideum AX4 hypothetical protein
           (DDBDRAFT_0192143) mRNA, complete cds
          Length = 1110

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 821 atatgaatcacttcatgattt 841
           |||||||||||||||||||||
Sbjct: 563 atatgaatcacttcatgattt 543
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>gb|AC112979.9| Mus musculus chromosome 3, clone RP24-530C22, complete sequence
          Length = 148599

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 796   ttctacatcttggtcagaatg 816
             |||||||||||||||||||||
Sbjct: 25444 ttctacatcttggtcagaatg 25424
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>gb|AC142308.3| Pan troglodytes BAC clone RP43-135J9 from Y, complete sequence
          Length = 148521

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1975  aagacaggcgtacaaaattat 1995
             |||||||||||||||||||||
Sbjct: 76253 aagacaggcgtacaaaattat 76233
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>gb|BT010550.1| Arabidopsis thaliana At1g14250 gene, complete cds
          Length = 1467

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 1108 aaggaagattcttagcaaccgagaatttctaccatacctcgaagttctttggg 1160
            ||||||| || || ||||| |||||||||| ||| || || ||||||||||||
Sbjct: 1094 aaggaagttttttggcaacagagaatttcttccacacatccaagttctttggg 1146
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>gb|AC159975.4| Mus musculus chromosome 3, clone RP24-204F16, complete sequence
          Length = 181930

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 796   ttctacatcttggtcagaatg 816
             |||||||||||||||||||||
Sbjct: 65473 ttctacatcttggtcagaatg 65453
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>gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete sequence
          Length = 135209

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 247   tcgacgccggcagcacgggga 267
             |||||||||||||||||||||
Sbjct: 30484 tcgacgccggcagcacgggga 30464
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>gb|AC097516.2| Homo sapiens BAC clone RP11-468A23 from 4, complete sequence
          Length = 159064

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1347   aatagcattgatgttacaaataaaa 1371
              |||||||||||||||| ||||||||
Sbjct: 120057 aatagcattgatgttaaaaataaaa 120081
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 1330    aagtgcccatggatcataata 1350
               |||||||||||||||||||||
Sbjct: 1851897 aagtgcccatggatcataata 1851917
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>gb|AC096950.2| Homo sapiens chromosome 1 clone RP4-612J11, complete sequence
          Length = 117864

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1192  tgctggctggggagcaatttt 1212
             |||||||||||||||||||||
Sbjct: 56883 tgctggctggggagcaatttt 56863
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>gb|AC017079.5| Homo sapiens BAC clone RP11-462M9 from 2, complete sequence
          Length = 176075

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1185  gatttgatgctggctggggag 1205
             |||||||||||||||||||||
Sbjct: 30519 gatttgatgctggctggggag 30539
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>dbj|AK175519.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
            clone: RAFL21-94-A03
          Length = 1856

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 1108 aaggaagattcttagcaaccgagaatttctaccatacctcgaagttctttggg 1160
            ||||||| || || ||||| |||||||||| ||| || || ||||||||||||
Sbjct: 1188 aaggaagttttttggcaacagagaatttcttccacacatccaagttctttggg 1240
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>dbj|AK175135.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
            clone: RAFL21-55-D22
          Length = 1856

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 1108 aaggaagattcttagcaaccgagaatttctaccatacctcgaagttctttggg 1160
            ||||||| || || ||||| |||||||||| ||| || || ||||||||||||
Sbjct: 1188 aaggaagttttttggcaacagagaatttcttccacacatccaagttctttggg 1240
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>gb|AC092967.5| Homo sapiens 3 BAC RP11-521A24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 179848

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 2087   ggaaattgctctgttaataattatt 2111
              |||||||||||||||| ||||||||
Sbjct: 144474 ggaaattgctctgttattaattatt 144498
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>dbj|BS000594.1| Pan troglodytes chromosome Y clone:PTB-031N07, complete sequences
          Length = 88699

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1975  aagacaggcgtacaaaattat 1995
             |||||||||||||||||||||
Sbjct: 66342 aagacaggcgtacaaaattat 66362
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>dbj|AK119680.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-H10, full
            insert sequence
          Length = 690

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1330 aagtgcccatggatcataata 1350
            |||||||||||||||||||||
Sbjct: 639  aagtgcccatggatcataata 659
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>emb|BX932940.2| Gallus gallus finished cDNA, clone ChEST36n15
          Length = 1397

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1830 acatgctgcactgctgagctg 1850
            |||||||||||||||||||||
Sbjct: 577  acatgctgcactgctgagctg 557
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>emb|BX821988.1|CNS0A93F Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL8ZF11 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 943

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 1264 agggggaactgctccttttttgcttctcc 1292
            |||| ||||||||||||||||||| ||||
Sbjct: 424  agggtgaactgctccttttttgctgctcc 396
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>dbj|AK063608.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-C12, full
            insert sequence
          Length = 696

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1330 aagtgcccatggatcataata 1350
            |||||||||||||||||||||
Sbjct: 645  aagtgcccatggatcataata 665
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>emb|AL663068.12| Mouse DNA sequence from clone RP23-30J5 on chromosome X, complete
              sequence
          Length = 225435

 Score = 42.1 bits (21), Expect = 8.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 796    ttctacatcttggtcagaatgtagc 820
              |||||||||||| ||||||||||||
Sbjct: 213759 ttctacatcttgatcagaatgtagc 213735


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 355,488,114
Number of extensions: 18429797
Number of successful extensions: 94488
Number of sequences better than 10.0: 58
Number of HSP's gapped: 94482
Number of HSP's successfully gapped: 95
Length of query: 2147
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2124
Effective length of database: 18,503,978,556
Effective search space: 39302450452944
Effective search space used: 39302450452944
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
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