ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf39h01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK099571:Os01g0753200 | 332 | 3e-91 | 2 | AK104526:Os02g0788500 | 295 | 4e-80 | 3 | AK104117:Os02g0788500 | 295 | 4e-80 | 4 | AK061452:Os02g0788500 | 295 | 4e-80 | 5 | Os01g0550200:Os01g0550200 | 69 | 7e-12 | 6 | AK068085:Os05g0170800 | 30 | 2.8 | 7 | AK101266:Os08g0172200 | 30 | 3.7 | 8 | AK121616:Os01g0327000 | 29 | 4.8 | 9 | AK106802:Os02g0130200 | 29 | 6.3 | 10 | AK121331:Os01g0816400 | 28 | 8.2 | 11 | AK073200:Os02g0110400 | 28 | 8.2 |
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>AK099571:Os01g0753200 | Length = 252 Score = 332 bits (850), Expect = 3e-91 Identities = 151/191 (79%), Positives = 173/191 (90%) Frame = +2 Query: 299 VQIAASNFNRSRICHVKSGDADGYPKTEDELADEETLQRNLDRAIREEDYARAAKIRDDL 478 +Q+A+SN R +I HVKSGDADGYP TED DEETLQRNL AI+EEDY+RAAKIRDDL Sbjct: 62 LQVASSNLGRCKIAHVKSGDADGYPTTEDLSIDEETLQRNLQTAIQEEDYSRAAKIRDDL 121 Query: 479 HVLHEDTEASVLAANTRFYNAFKNGDFTAMNSIWAKGDYVYVVHPGAGRISGYDVVLQSW 658 +LHEDT+AS+LAANTRFYNAFKNGD AM S+WAKGD+VYV+HP AGRISGYDVV+QSW Sbjct: 122 RILHEDTKASLLAANTRFYNAFKNGDLAAMYSLWAKGDHVYVIHPAAGRISGYDVVMQSW 181 Query: 659 EMVCNADYEFPLNIELKNIEVHVRGDLGYVTCLELVKTKGKSWGKQIATNVFEKIDGTWY 838 EMVC ADYEFPLNI+LKN+EVHV GDLGYVTCLE+VKTKG++WGKQ+ATNVFEK+DGTW Sbjct: 182 EMVCGADYEFPLNIDLKNVEVHVHGDLGYVTCLEVVKTKGRTWGKQVATNVFEKVDGTWR 241 Query: 839 ICIHHASHIEE 871 +C+HHASHIEE Sbjct: 242 MCVHHASHIEE 252
>AK104526:Os02g0788500 | Length = 240 Score = 295 bits (755), Expect = 4e-80 Identities = 141/213 (66%), Positives = 173/213 (81%), Gaps = 5/213 (2%) Frame = +2 Query: 248 PARLCIRRLSAERIFA----GVQIAASNFNRSRICHVKSGDADGYPKTEDELADEETLQR 415 PA +S R+ A G+Q+ ++ N+ R HVKSG+A+G P TE DEETLQR Sbjct: 28 PASASTAAVSCFRVGAKSLTGLQMTSTRANKVRTVHVKSGEAEGSPSTESITRDEETLQR 87 Query: 416 NLDRAIREEDYARAAKIRDDLHVLHEDTEASVLAANTRFYNAFKNGDFTAMNSIWAKGDY 595 +L AI+EE+YA+AAK+RD+L VL ED+ ++VLAAN RFYNAFKNGD AM+S WAKGD+ Sbjct: 88 DLQTAIQEENYAQAAKLRDELRVLQEDSRSAVLAANARFYNAFKNGDLVAMHSAWAKGDH 147 Query: 596 VYVVHPGAGRISGYDVVLQSWEMVCNADYEFPLNIELKNIEVHVRGDLGYVTCLELVKTK 775 VYVVHP AGRISGYD+V+QSWEMVC+ADYEFPL I+L+++EVHVRGDLGYVTCLELVKTK Sbjct: 148 VYVVHPSAGRISGYDMVMQSWEMVCDADYEFPLQIDLQDVEVHVRGDLGYVTCLELVKTK 207 Query: 776 G-KSWGKQIATNVFEKIDGTWYICIHHASHIEE 871 G SWG+Q+ATNVFEK+DG W+ICIHHASH +E Sbjct: 208 GSSSWGRQVATNVFEKVDGKWFICIHHASHFDE 240
>AK104117:Os02g0788500 | Length = 240 Score = 295 bits (755), Expect = 4e-80 Identities = 141/213 (66%), Positives = 173/213 (81%), Gaps = 5/213 (2%) Frame = +2 Query: 248 PARLCIRRLSAERIFA----GVQIAASNFNRSRICHVKSGDADGYPKTEDELADEETLQR 415 PA +S R+ A G+Q+ ++ N+ R HVKSG+A+G P TE DEETLQR Sbjct: 28 PASASTAAVSCFRVGAKSLTGLQMTSTRANKVRTVHVKSGEAEGSPSTESITRDEETLQR 87 Query: 416 NLDRAIREEDYARAAKIRDDLHVLHEDTEASVLAANTRFYNAFKNGDFTAMNSIWAKGDY 595 +L AI+EE+YA+AAK+RD+L VL ED+ ++VLAAN RFYNAFKNGD AM+S WAKGD+ Sbjct: 88 DLQTAIQEENYAQAAKLRDELRVLQEDSRSAVLAANARFYNAFKNGDLVAMHSAWAKGDH 147 Query: 596 VYVVHPGAGRISGYDVVLQSWEMVCNADYEFPLNIELKNIEVHVRGDLGYVTCLELVKTK 775 VYVVHP AGRISGYD+V+QSWEMVC+ADYEFPL I+L+++EVHVRGDLGYVTCLELVKTK Sbjct: 148 VYVVHPSAGRISGYDMVMQSWEMVCDADYEFPLQIDLQDVEVHVRGDLGYVTCLELVKTK 207 Query: 776 G-KSWGKQIATNVFEKIDGTWYICIHHASHIEE 871 G SWG+Q+ATNVFEK+DG W+ICIHHASH +E Sbjct: 208 GSSSWGRQVATNVFEKVDGKWFICIHHASHFDE 240
>AK061452:Os02g0788500 | Length = 240 Score = 295 bits (755), Expect = 4e-80 Identities = 141/213 (66%), Positives = 173/213 (81%), Gaps = 5/213 (2%) Frame = +2 Query: 248 PARLCIRRLSAERIFA----GVQIAASNFNRSRICHVKSGDADGYPKTEDELADEETLQR 415 PA +S R+ A G+Q+ ++ N+ R HVKSG+A+G P TE DEETLQR Sbjct: 28 PASASTAAVSCFRVGAKSLTGLQMTSTRANKVRTVHVKSGEAEGSPSTESITRDEETLQR 87 Query: 416 NLDRAIREEDYARAAKIRDDLHVLHEDTEASVLAANTRFYNAFKNGDFTAMNSIWAKGDY 595 +L AI+EE+YA+AAK+RD+L VL ED+ ++VLAAN RFYNAFKNGD AM+S WAKGD+ Sbjct: 88 DLQTAIQEENYAQAAKLRDELRVLQEDSRSAVLAANARFYNAFKNGDLVAMHSAWAKGDH 147 Query: 596 VYVVHPGAGRISGYDVVLQSWEMVCNADYEFPLNIELKNIEVHVRGDLGYVTCLELVKTK 775 VYVVHP AGRISGYD+V+QSWEMVC+ADYEFPL I+L+++EVHVRGDLGYVTCLELVKTK Sbjct: 148 VYVVHPSAGRISGYDMVMQSWEMVCDADYEFPLQIDLQDVEVHVRGDLGYVTCLELVKTK 207 Query: 776 G-KSWGKQIATNVFEKIDGTWYICIHHASHIEE 871 G SWG+Q+ATNVFEK+DG W+ICIHHASH +E Sbjct: 208 GSSSWGRQVATNVFEKVDGKWFICIHHASHFDE 240
>Os01g0550200:Os01g0550200 | Length = 293 Score = 68.6 bits (166), Expect = 7e-12 Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 2/120 (1%) Frame = +2 Query: 506 SVLAANTRFYNAFKNGDFTAMNSIWAKGDYVYVVHPGAGRISGYDVVLQSWEMVCN--AD 679 +++ NT FYN + G AM+ W DYV +H +GY+ V+ SW ++ N D Sbjct: 165 AIMNVNTEFYNIIREGSLPAMSHFWLNADYVKCIHATGELFTGYNAVMDSWGLLFNWGQD 224 Query: 680 YEFPLNIELKNIEVHVRGDLGYVTCLELVKTKGKSWGKQIATNVFEKIDGTWYICIHHAS 859 + +L+++ V G++ +V V G TNV+E +G WY+ HH+S Sbjct: 225 GGQGIAFQLRDVRARVLGEVAWVNMKAHVDVDP---GHFHVTNVYEFRNGRWYMVHHHSS 281
>AK068085:Os05g0170800 | Length = 300 Score = 30.0 bits (66), Expect = 2.8 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = +2 Query: 407 LQRNLDRAIREEDYARAAKIRDDLHVL 487 L+R+L +A+ EE + AAK RD+L +L Sbjct: 131 LRRSLKKAVEEERFEDAAKYRDELKIL 157
>AK101266:Os08g0172200 | Length = 334 Score = 29.6 bits (65), Expect = 3.7 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%) Frame = +2 Query: 365 GYPKTE--DELADEETLQRNLDRAIREEDYARAAKIRDDLHVLHEDTEASVLAANTRFYN 538 G KTE D+ + ++ +L +A+ E+YA AA +RD++ L +TE+ ++A Y Sbjct: 142 GSSKTEAQDKAINLLRVRADLQKAVDSENYALAAALRDEIAKL--ETESLAVSAKALAYQ 199 Query: 539 AFK 547 K Sbjct: 200 NVK 202
>AK121616:Os01g0327000 | Length = 357 Score = 29.3 bits (64), Expect = 4.8 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -2 Query: 188 AARWRSQPAPPTSPGNKSSQPRRQAILR 105 A R QP PP PG++ Q RR+A LR Sbjct: 43 ARRGAEQPQPPWLPGDRRRQGRRRAELR 70
>AK106802:Os02g0130200 | Length = 508 Score = 28.9 bits (63), Expect = 6.3 Identities = 14/53 (26%), Positives = 24/53 (45%) Frame = -3 Query: 616 PRMDNIHIVSFSPDRVHCSKISILESVVESCICCKDGSFSILMEDVQIIPDFG 458 P D IH+ + + +I+ + CI +GSF++ M D+ P G Sbjct: 279 PNTDGIHVADSTAVTIQSCRIA----TGDDCISISNGSFAVRMRDIDCGPGHG 327
>AK121331:Os01g0816400 | Length = 1997 Score = 28.5 bits (62), Expect = 8.2 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 5/86 (5%) Frame = +2 Query: 335 ICHVKSGDADGYPKTEDELADEETLQRNL---DRAIREEDYARAAKIRDDLHVLHEDTEA 505 + SG +DG P+ + TL +NL D +R E +KI ++ H + T Sbjct: 834 VSSASSGTSDGLPREDISAKITPTLLKNLGSPDWKLRLESIDAVSKIVEEAHKRIQPTGT 893 Query: 506 SVL--AANTRFYNAFKNGDFTAMNSI 577 L A R Y++ KN +++I Sbjct: 894 VELFTALRARLYDSNKNLVMATLSTI 919
>AK073200:Os02g0110400 | Length = 747 Score = 28.5 bits (62), Expect = 8.2 Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 5/97 (5%) Frame = +2 Query: 257 LCIRRLSAERIFA-----GVQIAASNFNRSRICHVKSGDADGYPKTEDELADEETLQRNL 421 LC + +A R+F GV + +N V++GD + K DE+ Q ++ Sbjct: 254 LCKKMEAALRVFGDMKDHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMPGAGFAQNSV 313 Query: 422 DRAIREEDYARAAKIRDDLHVLHEDTEASVLAANTRF 532 + + Y A K+ + + + E E + + F Sbjct: 314 SYNVMIKGYVEAGKVEEAVGLFSEMGEKGLRLSEKTF 350 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 31,783,660 Number of extensions: 787466 Number of successful extensions: 2329 Number of sequences better than 10.0: 11 Number of HSP's gapped: 2324 Number of HSP's successfully gapped: 11 Length of query: 347 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 246 Effective length of database: 11,355,714 Effective search space: 2793505644 Effective search space used: 2793505644 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
