ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf39f04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001065974.1| Oryza sativa (japonica cultivar-group) Os07g0409100 (Os07g0409100) mRNA, complete cds Length = 1962 Score = 1362 bits (687), Expect = 0.0 Identities = 1194/1363 (87%) Strand = Plus / Plus Query: 244 tctcgggggtggtgatggggttggtggtcggcgtcgtgattatggccgggtggagccgcg 303 |||||||| ||||||||||| ||||||||||||||| | ||||||||||||||||||| | Sbjct: 151 tctcggggatggtgatggggatggtggtcggcgtcgcgcttatggccgggtggagccgtg 210 Query: 304 tgatgcagcggcgcaccaggaagcgcgtcgccaaggctgcggatatcatggtccttgggt 363 ||||||||||||||| |||||||||| |||| |||||||||||||||| ||||||||||| Sbjct: 211 tgatgcagcggcgcagcaggaagcgcatcgctaaggctgcggatatcaaggtccttgggt 270 Query: 364 ctcttggcagggacgacctcaagaagctctgcggcgacaatttccccgagtggatatctt 423 |||| || |||||||| ||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 271 ctctcggtagggacgatctcaagaagctgtgcggcgacaatttccccgagtggatatcct 330 Query: 424 tcccacagtatgagcaggtgaaatggttgaacaagcatcttagcaaactttggccttttg 483 |||| ||||||||||||||||||||| ||||||||||||| |||||||| |||||||| | Sbjct: 331 tcccgcagtatgagcaggtgaaatggctgaacaagcatctcagcaaactctggcctttcg 390 Query: 484 tttcacaagctgcaactgcagttgttaaggaatcagttgaaccactgctagatgattatc 543 || |||||||| |||||||| || |||||||| ||||| ||||||||||||||||||| Sbjct: 391 ttgatcaagctgccactgcagtagtcaaggaatctgttgagccactgctagatgattatc 450 Query: 544 gacctccaggaataaaatctttgaagttcaacaaattctctcttggaaatgtctcgccaa 603 |||||||||||||||||||| ||||||||| ||||||||||||||||| ||| || |||| Sbjct: 451 gacctccaggaataaaatctctgaagttcagcaaattctctcttggaactgtttcaccaa 510 Query: 604 agatcgaaggcatccgtatccaaaatctccagccaggccaaatcataatggatatagatt 663 |||| ||||| || || || |||||| | |||||||||||||||||||||||||||||| Sbjct: 511 agatagaaggtattcgcattcaaaatattcagccaggccaaatcataatggatatagatc 570 Query: 664 tccgttggggtggtgatccaagcataatccttgctgttgatgctcgagttgcatcactgc 723 | |||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 571 ttcgttggggtggtgatccaagcataatccttgctgttgatgctgttgttgcatcacttc 630 Query: 724 ctattcagctcaaggatctccaggtctttaccgttgttcgtgttgtatttcaactgtcag 783 ||||||||||||| ||||| || |||| ||| |||| ||||||||||||||||| |||| Sbjct: 631 ctattcagctcaaagatcttcaagtctacaccattgtccgtgttgtatttcaactatcag 690 Query: 784 aagagattccctgcatctctgcttttgttgttgctctcctcgcagagccagagcctaaaa 843 | ||||| || |||||||||||| ||||||||||||| || |||||||||||||| |||| Sbjct: 691 aggagatcccttgcatctctgctgttgttgttgctcttcttgcagagccagagccgaaaa 750 Query: 844 tacagtacacattgaaggctgttgggggtagtctgactgctattccaggactttctgata 903 |||| ||||| ||||||||| |||| || |||||||| ||| |||||||||| || || | Sbjct: 751 tacaatacactttgaaggctattggaggaagtctgaccgctgttccaggactctccgaca 810 Query: 904 tgattgatgatactgtcaattcaattgtcaatgacatgctccagtggccacacagggttg 963 |||||||||| ||||||||||||||||| |||||||||| |||||||||||||| ||| Sbjct: 811 tgattgatgacactgtcaattcaattgtttctgacatgctcaagtggccacacaggcttg 870 Query: 964 ttgttccacttggcgtcaatgttgatacaagtgagctggagcttaaacctgagggaaaac 1023 ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 871 ttgttccacttggtgtcaatgttgatacaagtgagctggagcttaaacctcagggaagac 930 Query: 1024 tgtctgttactgtagtaaaagcaatatctctgaagaataaggagttgattggtaaatctg 1083 | ||||||||||||||||||||| || |||||||||||||||||||||||||||| | Sbjct: 931 ttactgttactgtagtaaaagcaacttcattgaagaataaggagttgattggtaaatcag 990 Query: 1084 atccctacgtgaccctgtatgtgcgtcccatgttcaaggtcaaaacaaaagtcatagacg 1143 |||| || |||| || ||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 991 atccatatgtgatactatatgtgcgtccaatgttcaaggtcaaaacaaaagtcatagatg 1050 Query: 1144 acaacctaaatcctgaatggaatgaaacatttgaattgattgttgaagacaaggaaaccc 1203 | ||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 1051 ataacctaaatcctgaatggaatgaaacattccctctgattgttgaagacaaagaaaccc 1110 Query: 1204 aatctgtcatttttgaggtttatgatgaagacaaccttcagcaagacaagaggctaggtg 1263 | ||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||| Sbjct: 1111 agtctgtcatttttgaggtatatgatgaagacagacttcagcaagacaaaaagcttggtg 1170 Query: 1264 tggctaaattagcagtgaataatattgtgcccgaaattcccagtgaaatcactctgaagc 1323 | |||||| |||||||||| | | || || || | |||||||||||||| |||| | Sbjct: 1171 tagctaaactagcagtgaacagtcttcaacctgaggctaccagtgaaatcactttgaaac 1230 Query: 1324 ttatgcagtcactagattcactcaagattaaagactacagggatagaggatcactgcatc 1383 || ||| ||||||||||| || || ||||| ||| || |||||||||| || | |||| Sbjct: 1231 ttcagcaatcactagattctcttaaaattaaggacaccaaggatagaggaacattacatc 1290 Query: 1384 ttaaggtcatgtatcatccatttaccaaggaagaacaactggaagccctggagtcagaaa 1443 || |||||| ||||| |||||| | ||||||||||| |||||||||| ||||| |||| Sbjct: 1291 ttcaggtcacatatcacccattttcaaaggaagaacagatggaagccctagagtctgaaa 1350 Query: 1444 agaaagcaatagaggagagaaagcggctgaaggaggctggggtaattggcagcacgatgg 1503 ||| ||| || |||||||||||||| || |||||||||||||| ||||| || || |||| Sbjct: 1351 agagagctatcgaggagagaaagcgactcaaggaggctggggttattggtagtacaatgg 1410 Query: 1504 atgcacttggtggcgccgcttcactagttggttcaggtgttggatttgtgggcactggcg 1563 |||| |||||||| || ||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 1411 atgctcttggtggtgctgcttcactagttggttctggtgttggacttgtgggcactggca 1470 Query: 1564 ttgccgggggtgttgggctcgtgggctcagggcttggtgctgg 1606 ||| ||| || ||||| || || || ||||| |||||||||| Sbjct: 1471 ttgtcggcggggttggacttgttggatcaggaattggtgctgg 1513 Score = 95.6 bits (48), Expect = 6e-16 Identities = 129/156 (82%) Strand = Plus / Plus Query: 1620 ggttctggtattggcgccgtgggcagcggccttggtaaagctgggaagttcatggggagg 1679 ||||| ||||||||||| || ||||||||||| |||||||||||||| |||||||| | | Sbjct: 1548 ggttcgggtattggcgctgtcggcagcggcctcggtaaagctgggaaattcatgggcaag 1607 Query: 1680 actgtgacagggcacttgggcatatctcgtaagagtggtagcagctccactgttccccaa 1739 |||||| | |||| || | || || || |||| ||||||||||| |||| |||||| Sbjct: 1608 actgtggccgggcctttcagtatgtcccggaagaacggtagcagctcaactgctccccag 1667 Query: 1740 cctgaccagccttctgcataacttgatgtacagtga 1775 |||| || |||||||| | |||||||||||||||| Sbjct: 1668 gctgaacaaccttctgcgtgacttgatgtacagtga 1703
>dbj|AK060230.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-H02, full insert sequence Length = 1967 Score = 1340 bits (676), Expect = 0.0 Identities = 1192/1363 (87%), Gaps = 2/1363 (0%) Strand = Plus / Plus Query: 244 tctcgggggtggtgatggggttggtggtcggcgtcgtgattatggccgggtggagccgcg 303 |||||||| ||||||||||| ||||||||||||||| | ||||||||||||||||||| | Sbjct: 151 tctcggggatggtgatggggatggtggtcggcgtcgcgcttatggccgggtggagccgtg 210 Query: 304 tgatgcagcggcgcaccaggaagcgcgtcgccaaggctgcggatatcatggtccttgggt 363 ||||||||||||||| |||||||||| |||| |||||||||||||||| ||||||||||| Sbjct: 211 tgatgcagcggcgcagcaggaagcgcatcgctaaggctgcggatatcaaggtccttgggt 270 Query: 364 ctcttggcagggacgacctcaagaagctctgcggcgacaatttccccgagtggatatctt 423 |||| || |||||||| ||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 271 ctctcggtagggacgatctcaagaagctgtgcggcgacaatttccccgagtggatatcct 330 Query: 424 tcccacagtatgagcaggtgaaatggttgaacaagcatcttagcaaactttggccttttg 483 |||| ||||||||||||||||||||| ||||||||||||| |||||||| |||||||| | Sbjct: 331 tcccgcagtatgagcaggtgaaatggctgaacaagcatctcagcaaactctggcctttcg 390 Query: 484 tttcacaagctgcaactgcagttgttaaggaatcagttgaaccactgctagatgattatc 543 || |||||||| |||||||| || |||||||| ||||| ||||||||||||||||||| Sbjct: 391 ttggtcaagctgccactgcagtagtcaaggaatctgttgagccactgctagatgattatc 450 Query: 544 gacctccaggaataaaatctttgaagttcaacaaattctctcttggaaatgtctcgccaa 603 |||||||||||||||||||| ||||||||| ||||||||||||||||| ||| || |||| Sbjct: 451 gacctccaggaataaaatctctgaagttcagcaaattctctcttggaactgtttcaccaa 510 Query: 604 agatcgaaggcatccgtatccaaaatctccagccaggccaaatcataatggatatagatt 663 |||| ||||| || || || |||||| | ||||||||||||||||||||||||| ||| Sbjct: 511 agatagaaggtattcgcattcaaaatattcagccaggccaaatcataatggata--gatc 568 Query: 664 tccgttggggtggtgatccaagcataatccttgctgttgatgctcgagttgcatcactgc 723 | |||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 569 ttcgttggggtggtgatccaagcataatccttgctgttgatgctgttgttgcatcacttc 628 Query: 724 ctattcagctcaaggatctccaggtctttaccgttgttcgtgttgtatttcaactgtcag 783 ||||||||||||| ||||| || |||| ||| |||| ||||||||||||||||| |||| Sbjct: 629 ctattcagctcaaagatcttcaagtctacaccattgtccgtgttgtatttcaactatcag 688 Query: 784 aagagattccctgcatctctgcttttgttgttgctctcctcgcagagccagagcctaaaa 843 | ||||| || |||||||||||| ||||||||||||| || |||||||||||||| |||| Sbjct: 689 aggagatcccttgcatctctgctgttgttgttgctcttcttgcagagccagagccgaaaa 748 Query: 844 tacagtacacattgaaggctgttgggggtagtctgactgctattccaggactttctgata 903 |||| ||||| ||||||||| |||| || |||||||| ||| |||||||||| || || | Sbjct: 749 tacaatacactttgaaggctattggaggaagtctgaccgctgttccaggactctccgaca 808 Query: 904 tgattgatgatactgtcaattcaattgtcaatgacatgctccagtggccacacagggttg 963 |||||||||| ||||||||||||||||| |||||||||| |||||||||||||| ||| Sbjct: 809 tgattgatgacactgtcaattcaattgtttctgacatgctcaagtggccacacaggcttg 868 Query: 964 ttgttccacttggcgtcaatgttgatacaagtgagctggagcttaaacctgagggaaaac 1023 ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 869 ttgttccacttggtgtcaatgttgatacaagtgagctggagcttaaacctcagggaagac 928 Query: 1024 tgtctgttactgtagtaaaagcaatatctctgaagaataaggagttgattggtaaatctg 1083 | ||||||||||||||||||||| || |||||||||||||||||||||||||||| | Sbjct: 929 ttactgttactgtagtaaaagcaacttcattgaagaataaggagttgattggtaaatcag 988 Query: 1084 atccctacgtgaccctgtatgtgcgtcccatgttcaaggtcaaaacaaaagtcatagacg 1143 |||| || |||| || ||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 989 atccatatgtgatactatatgtgcgtccaatgttcaaggtcaaaacaaaagtcatagatg 1048 Query: 1144 acaacctaaatcctgaatggaatgaaacatttgaattgattgttgaagacaaggaaaccc 1203 | ||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 1049 ataacctaaatcctgaatggaatgaaacattccctctgattgttgaagacaaagaaaccc 1108 Query: 1204 aatctgtcatttttgaggtttatgatgaagacaaccttcagcaagacaagaggctaggtg 1263 | ||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||| Sbjct: 1109 agtctgtcatttttgaggtatatgatgaagacagacttcagcaagacaaaaagcttggtg 1168 Query: 1264 tggctaaattagcagtgaataatattgtgcccgaaattcccagtgaaatcactctgaagc 1323 | |||||| |||||||||| | | || || || | |||||||||||||| |||| | Sbjct: 1169 tagctaaactagcagtgaacagtcttcaacctgaggctaccagtgaaatcactttgaaac 1228 Query: 1324 ttatgcagtcactagattcactcaagattaaagactacagggatagaggatcactgcatc 1383 || ||| ||||||||||| || || ||||| ||| || |||||||||| || | |||| Sbjct: 1229 ttcagcaatcactagattctcttaaaattaaggacaccaaggatagaggaacattacatc 1288 Query: 1384 ttaaggtcatgtatcatccatttaccaaggaagaacaactggaagccctggagtcagaaa 1443 || |||||| ||||| |||||| | ||||||||||| |||||||||| ||||| |||| Sbjct: 1289 ttcaggtcacatatcacccattttcaaaggaagaacagatggaagccctagagtctgaaa 1348 Query: 1444 agaaagcaatagaggagagaaagcggctgaaggaggctggggtaattggcagcacgatgg 1503 ||| ||| || |||||||||||||| || |||||||||||||| ||||| || || |||| Sbjct: 1349 agagagctatcgaggagagaaagcgactcaaggaggctggggttattggtagtacaatgg 1408 Query: 1504 atgcacttggtggcgccgcttcactagttggttcaggtgttggatttgtgggcactggcg 1563 |||| |||||||| || ||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 1409 atgctcttggtggtgctgcttcactagttggttctggtgttggacttgtgggcactggca 1468 Query: 1564 ttgccgggggtgttgggctcgtgggctcagggcttggtgctgg 1606 ||| ||| || ||||| || || || ||||| |||||||||| Sbjct: 1469 ttgtcggcggggttggacttgttggatcaggaattggtgctgg 1511 Score = 87.7 bits (44), Expect = 1e-13 Identities = 128/156 (82%) Strand = Plus / Plus Query: 1620 ggttctggtattggcgccgtgggcagcggccttggtaaagctgggaagttcatggggagg 1679 ||||| ||||||||||| || ||||||||||| |||||||||||||| |||||||| | | Sbjct: 1546 ggttcgggtattggcgctgtcggcagcggcctcggtaaagctgggaaattcatgggcaag 1605 Query: 1680 actgtgacagggcacttgggcatatctcgtaagagtggtagcagctccactgttccccaa 1739 |||||| | |||| || | || || || |||| ||||||||||| || | |||||| Sbjct: 1606 actgtggccgggcctttcagtatgtcccggaagaacggtagcagctcaacggctccccag 1665 Query: 1740 cctgaccagccttctgcataacttgatgtacagtga 1775 |||| || |||||||| | |||||||||||||||| Sbjct: 1666 gctgaacaaccttctgcgtgacttgatgtacagtga 1701
>gb|AY105616.1| Zea mays PCO125437 mRNA sequence Length = 968 Score = 319 bits (161), Expect = 2e-83 Identities = 290/333 (87%) Strand = Plus / Plus Query: 947 gtggccacacagggttgttgttccacttggcgtcaatgttgatacaagtgagctggagct 1006 ||||||||||||| ||||||| |||||| |||||||||||||| ||||| ||||||| Sbjct: 18 gtggccacacaggcatgttgttaaacttggtgtcaatgttgatacgagtgacttggagct 77 Query: 1007 taaacctgagggaaaactgtctgttactgtagtaaaagcaatatctctgaagaataagga 1066 ||||||| |||||| ||| ||||||||||| |||||||||| ||| ||| |||||||| Sbjct: 78 taaacctcagggaagactttctgttactgtggtaaaagcaacttctttgagaaataagga 137 Query: 1067 gttgattggtaaatctgatccctacgtgaccctgtatgtgcgtcccatgttcaaggtcaa 1126 | |||| |||||||| || || || |||| ||||||||||| || ||||| |||||||| Sbjct: 138 gatgatcggtaaatcagacccttatgtgaaactgtatgtgcggccaatgtttaaggtcaa 197 Query: 1127 aacaaaagtcatagacgacaacctaaatcctgaatggaatgaaacatttgaattgattgt 1186 ||||||||||||||| || |||| ||||| |||||||||||||||||||| |||||||| Sbjct: 198 aacaaaagtcatagatgatgacctgaatccggaatggaatgaaacatttgacttgattgt 257 Query: 1187 tgaagacaaggaaacccaatctgtcatttttgaggtttatgatgaagacaaccttcagca 1246 |||||||| |||||||||||||| |||||||||||||| || |||||||| |||||||| Sbjct: 258 cgaagacaaagaaacccaatctgttatttttgaggtttacgacgaagacaaacttcagca 317 Query: 1247 agacaagaggctaggtgtggctaaattagcagt 1279 ||||||||| ||||||||||| ||| ||||||| Sbjct: 318 agacaagagactaggtgtggcaaaactagcagt 350 Score = 95.6 bits (48), Expect = 6e-16 Identities = 108/128 (84%) Strand = Plus / Plus Query: 1380 catcttaaggtcatgtatcatccatttaccaaggaagaacaactggaagccctggagtca 1439 ||||||||||| | ||| || || ||||| |||||||| || ||||||||||| ||| Sbjct: 451 catcttaaggtaaagtaccacccctttacaaaggaagagcagctggaagccctagagatg 510 Query: 1440 gaaaagaaagcaatagaggagagaaagcggctgaaggaggctggggtaattggcagcacg 1499 ||||| |||| ||||||||||| ||||| ||||||||||||||| ||||||| ||||| Sbjct: 511 gaaaaacaagccatagaggagaggaagcgtctgaaggaggctgggataattggtagcaca 570 Query: 1500 atggatgc 1507 |||||||| Sbjct: 571 atggatgc 578 Score = 93.7 bits (47), Expect = 2e-15 Identities = 134/163 (82%) Strand = Plus / Plus Query: 1530 gttggttcaggtgttggatttgtgggcactggcgttgccgggggtgttgggctcgtgggc 1589 |||||||| ||||||||||||||||| |||||| ||| || || | || |||| || Sbjct: 580 gttggttctggtgttggatttgtgggtactggcattggcgctggcctcggtttcgttggt 639 Query: 1590 tcagggcttggtgctggcgctggtctggtaggttctggtattggcgccgtgggcagcggc 1649 ||||| ||||||||||||| || || || ||||||||||| || || |||| ||| Sbjct: 640 tcaggaattggtgctggcgcaggccttgttacctctggtattggtgctgtcagcagtggc 699 Query: 1650 cttggtaaagctgggaagttcatggggaggactgtgacagggc 1692 ||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 700 cttggtaaagccgggaagttcatgggcaggactgtgacagggc 742
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 266 bits (134), Expect = 3e-67 Identities = 206/230 (89%) Strand = Plus / Plus Query: 993 agtgagctggagcttaaacctgagggaaaactgtctgttactgtagtaaaagcaatatct 1052 ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| || Sbjct: 12701175 agtgagctggagcttaaacctcagggaagacttactgttactgtagtaaaagcaacttca 12701234 Query: 1053 ctgaagaataaggagttgattggtaaatctgatccctacgtgaccctgtatgtgcgtccc 1112 |||||||||||||||||||||||||||| ||||| || |||| || ||||||||||| Sbjct: 12701235 ttgaagaataaggagttgattggtaaatcagatccatatgtgatactatatgtgcgtcca 12701294 Query: 1113 atgttcaaggtcaaaacaaaagtcatagacgacaacctaaatcctgaatggaatgaaaca 1172 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 12701295 atgttcaaggtcaaaacaaaagtcatagatgataacctaaatcctgaatggaatgaaaca 12701354 Query: 1173 tttgaattgattgttgaagacaaggaaacccaatctgtcatttttgaggt 1222 || |||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 12701355 ttccctctgattgttgaagacaaagaaacccagtctgtcatttttgaggt 12701404 Score = 174 bits (88), Expect = 8e-40 Identities = 181/212 (85%) Strand = Plus / Plus Query: 1395 tatcatccatttaccaaggaagaacaactggaagccctggagtcagaaaagaaagcaata 1454 ||||| |||||| | ||||||||||| |||||||||| ||||| ||||||| ||| || Sbjct: 12706414 tatcacccattttcaaaggaagaacagatggaagccctagagtctgaaaagagagctatc 12706473 Query: 1455 gaggagagaaagcggctgaaggaggctggggtaattggcagcacgatggatgcacttggt 1514 |||||||||||||| || |||||||||||||| ||||| || || |||||||| |||||| Sbjct: 12706474 gaggagagaaagcgactcaaggaggctggggttattggtagtacaatggatgctcttggt 12706533 Query: 1515 ggcgccgcttcactagttggttcaggtgttggatttgtgggcactggcgttgccgggggt 1574 || || ||||||||||||||||| ||||||||| |||||||||||||| ||| ||| || Sbjct: 12706534 ggtgctgcttcactagttggttctggtgttggacttgtgggcactggcattgtcggcggg 12706593 Query: 1575 gttgggctcgtgggctcagggcttggtgctgg 1606 ||||| || || || ||||| |||||||||| Sbjct: 12706594 gttggacttgttggatcaggaattggtgctgg 12706625 Score = 155 bits (78), Expect = 7e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 337 aggctgcggatatcatggtccttgggtctcttggcagggacgacctcaagaagctctgcg 396 ||||||||||||||| ||||||||||||||| || |||||||| ||||||||||| |||| Sbjct: 12694549 aggctgcggatatcaaggtccttgggtctctcggtagggacgatctcaagaagctgtgcg 12694608 Query: 397 gcgacaatttccccgagtggatatctttcccacagtatgagcaggt 442 ||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 12694609 gcgacaatttccccgagtggatatccttcccgcagtatgagcaggt 12694654 Score = 155 bits (78), Expect = 7e-34 Identities = 111/122 (90%) Strand = Plus / Plus Query: 492 gctgcaactgcagttgttaaggaatcagttgaaccactgctagatgattatcgacctcca 551 ||||| |||||||| || |||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 12697353 gctgccactgcagtagtcaaggaatctgttgagccactgctagatgattatcgacctcca 12697412 Query: 552 ggaataaaatctttgaagttcaacaaattctctcttggaaatgtctcgccaaagatcgaa 611 |||||||||||| ||||||||| ||||||||||||||||| ||| || |||||||| ||| Sbjct: 12697413 ggaataaaatctctgaagttcagcaaattctctcttggaactgtttcaccaaagatagaa 12697472 Query: 612 gg 613 || Sbjct: 12697473 gg 12697474 Score = 151 bits (76), Expect = 1e-32 Identities = 100/108 (92%) Strand = Plus / Plus Query: 624 caaaatctccagccaggccaaatcataatggatatagatttccgttggggtggtgatcca 683 |||||| | |||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 12698770 caaaatattcagccaggccaaatcataatggatatagatcttcgttggggtggtgatcca 12698829 Query: 684 agcataatccttgctgttgatgctcgagttgcatcactgcctattcag 731 |||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 12698830 agcataatccttgctgttgatgctgttgttgcatcacttcctattcag 12698877 Score = 127 bits (64), Expect = 2e-25 Identities = 88/96 (91%) Strand = Plus / Plus Query: 244 tctcgggggtggtgatggggttggtggtcggcgtcgtgattatggccgggtggagccgcg 303 |||||||| ||||||||||| ||||||||||||||| | ||||||||||||||||||| | Sbjct: 12694314 tctcggggatggtgatggggatggtggtcggcgtcgcgcttatggccgggtggagccgtg 12694373 Query: 304 tgatgcagcggcgcaccaggaagcgcgtcgccaagg 339 ||||||||||||||| |||||||||| |||| |||| Sbjct: 12694374 tgatgcagcggcgcagcaggaagcgcatcgctaagg 12694409 Score = 111 bits (56), Expect = 1e-20 Identities = 74/80 (92%) Strand = Plus / Plus Query: 915 actgtcaattcaattgtcaatgacatgctccagtggccacacagggttgttgttccactt 974 ||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||| Sbjct: 12699848 actgtcaattcaattgtttctgacatgctcaagtggccacacaggcttgttgttccactt 12699907 Query: 975 ggcgtcaatgttgatacaag 994 || ||||||||||||||||| Sbjct: 12699908 ggtgtcaatgttgatacaag 12699927 Score = 95.6 bits (48), Expect = 6e-16 Identities = 129/156 (82%) Strand = Plus / Plus Query: 1620 ggttctggtattggcgccgtgggcagcggccttggtaaagctgggaagttcatggggagg 1679 ||||| ||||||||||| || ||||||||||| |||||||||||||| |||||||| | | Sbjct: 12706660 ggttcgggtattggcgctgtcggcagcggcctcggtaaagctgggaaattcatgggcaag 12706719 Query: 1680 actgtgacagggcacttgggcatatctcgtaagagtggtagcagctccactgttccccaa 1739 |||||| | |||| || | || || || |||| ||||||||||| |||| |||||| Sbjct: 12706720 actgtggccgggcctttcagtatgtcccggaagaacggtagcagctcaactgctccccag 12706779 Query: 1740 cctgaccagccttctgcataacttgatgtacagtga 1775 |||| || |||||||| | |||||||||||||||| Sbjct: 12706780 gctgaacaaccttctgcgtgacttgatgtacagtga 12706815 Score = 91.7 bits (46), Expect = 9e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 729 cagctcaaggatctccaggtctttaccgttgttcgtgttgtatttcaactgtcagaagag 788 |||||||| ||||| || |||| ||| |||| ||||||||||||||||| ||||| ||| Sbjct: 12698972 cagctcaaagatcttcaagtctacaccattgtccgtgttgtatttcaactatcagaggag 12699031 Query: 789 attccctgcatctctgcttttgttgttgctctcctcgcagag 830 || || |||||||||||| ||||||||||||| || |||||| Sbjct: 12699032 atcccttgcatctctgctgttgttgttgctcttcttgcagag 12699073 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 438 caggtgaaatggttgaacaagcatcttagcaaactttggccttt 481 |||||||||||| ||||||||||||| |||||||| |||||||| Sbjct: 12696472 caggtgaaatggctgaacaagcatctcagcaaactctggccttt 12696515 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1219 aggtttatgatgaagacaaccttcagcaagacaagaggctaggtgtggctaaattagcag 1278 |||| ||||||||||||| |||||||||||||| | ||| ||||| |||||| |||||| Sbjct: 12704270 aggtatatgatgaagacagacttcagcaagacaaaaagcttggtgtagctaaactagcag 12704329 Query: 1279 tgaa 1282 |||| Sbjct: 12704330 tgaa 12704333
>dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0492E07 Length = 143794 Score = 266 bits (134), Expect = 3e-67 Identities = 206/230 (89%) Strand = Plus / Plus Query: 993 agtgagctggagcttaaacctgagggaaaactgtctgttactgtagtaaaagcaatatct 1052 ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| || Sbjct: 75645 agtgagctggagcttaaacctcagggaagacttactgttactgtagtaaaagcaacttca 75704 Query: 1053 ctgaagaataaggagttgattggtaaatctgatccctacgtgaccctgtatgtgcgtccc 1112 |||||||||||||||||||||||||||| ||||| || |||| || ||||||||||| Sbjct: 75705 ttgaagaataaggagttgattggtaaatcagatccatatgtgatactatatgtgcgtcca 75764 Query: 1113 atgttcaaggtcaaaacaaaagtcatagacgacaacctaaatcctgaatggaatgaaaca 1172 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 75765 atgttcaaggtcaaaacaaaagtcatagatgataacctaaatcctgaatggaatgaaaca 75824 Query: 1173 tttgaattgattgttgaagacaaggaaacccaatctgtcatttttgaggt 1222 || |||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 75825 ttccctctgattgttgaagacaaagaaacccagtctgtcatttttgaggt 75874 Score = 174 bits (88), Expect = 8e-40 Identities = 181/212 (85%) Strand = Plus / Plus Query: 1395 tatcatccatttaccaaggaagaacaactggaagccctggagtcagaaaagaaagcaata 1454 ||||| |||||| | ||||||||||| |||||||||| ||||| ||||||| ||| || Sbjct: 80884 tatcacccattttcaaaggaagaacagatggaagccctagagtctgaaaagagagctatc 80943 Query: 1455 gaggagagaaagcggctgaaggaggctggggtaattggcagcacgatggatgcacttggt 1514 |||||||||||||| || |||||||||||||| ||||| || || |||||||| |||||| Sbjct: 80944 gaggagagaaagcgactcaaggaggctggggttattggtagtacaatggatgctcttggt 81003 Query: 1515 ggcgccgcttcactagttggttcaggtgttggatttgtgggcactggcgttgccgggggt 1574 || || ||||||||||||||||| ||||||||| |||||||||||||| ||| ||| || Sbjct: 81004 ggtgctgcttcactagttggttctggtgttggacttgtgggcactggcattgtcggcggg 81063 Query: 1575 gttgggctcgtgggctcagggcttggtgctgg 1606 ||||| || || || ||||| |||||||||| Sbjct: 81064 gttggacttgttggatcaggaattggtgctgg 81095 Score = 155 bits (78), Expect = 7e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 337 aggctgcggatatcatggtccttgggtctcttggcagggacgacctcaagaagctctgcg 396 ||||||||||||||| ||||||||||||||| || |||||||| ||||||||||| |||| Sbjct: 69019 aggctgcggatatcaaggtccttgggtctctcggtagggacgatctcaagaagctgtgcg 69078 Query: 397 gcgacaatttccccgagtggatatctttcccacagtatgagcaggt 442 ||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 69079 gcgacaatttccccgagtggatatccttcccgcagtatgagcaggt 69124 Score = 155 bits (78), Expect = 7e-34 Identities = 111/122 (90%) Strand = Plus / Plus Query: 492 gctgcaactgcagttgttaaggaatcagttgaaccactgctagatgattatcgacctcca 551 ||||| |||||||| || |||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 71823 gctgccactgcagtagtcaaggaatctgttgagccactgctagatgattatcgacctcca 71882 Query: 552 ggaataaaatctttgaagttcaacaaattctctcttggaaatgtctcgccaaagatcgaa 611 |||||||||||| ||||||||| ||||||||||||||||| ||| || |||||||| ||| Sbjct: 71883 ggaataaaatctctgaagttcagcaaattctctcttggaactgtttcaccaaagatagaa 71942 Query: 612 gg 613 || Sbjct: 71943 gg 71944 Score = 151 bits (76), Expect = 1e-32 Identities = 100/108 (92%) Strand = Plus / Plus Query: 624 caaaatctccagccaggccaaatcataatggatatagatttccgttggggtggtgatcca 683 |||||| | |||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 73240 caaaatattcagccaggccaaatcataatggatatagatcttcgttggggtggtgatcca 73299 Query: 684 agcataatccttgctgttgatgctcgagttgcatcactgcctattcag 731 |||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 73300 agcataatccttgctgttgatgctgttgttgcatcacttcctattcag 73347 Score = 127 bits (64), Expect = 2e-25 Identities = 88/96 (91%) Strand = Plus / Plus Query: 244 tctcgggggtggtgatggggttggtggtcggcgtcgtgattatggccgggtggagccgcg 303 |||||||| ||||||||||| ||||||||||||||| | ||||||||||||||||||| | Sbjct: 68784 tctcggggatggtgatggggatggtggtcggcgtcgcgcttatggccgggtggagccgtg 68843 Query: 304 tgatgcagcggcgcaccaggaagcgcgtcgccaagg 339 ||||||||||||||| |||||||||| |||| |||| Sbjct: 68844 tgatgcagcggcgcagcaggaagcgcatcgctaagg 68879 Score = 111 bits (56), Expect = 1e-20 Identities = 74/80 (92%) Strand = Plus / Plus Query: 915 actgtcaattcaattgtcaatgacatgctccagtggccacacagggttgttgttccactt 974 ||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||| Sbjct: 74318 actgtcaattcaattgtttctgacatgctcaagtggccacacaggcttgttgttccactt 74377 Query: 975 ggcgtcaatgttgatacaag 994 || ||||||||||||||||| Sbjct: 74378 ggtgtcaatgttgatacaag 74397 Score = 95.6 bits (48), Expect = 6e-16 Identities = 129/156 (82%) Strand = Plus / Plus Query: 1620 ggttctggtattggcgccgtgggcagcggccttggtaaagctgggaagttcatggggagg 1679 ||||| ||||||||||| || ||||||||||| |||||||||||||| |||||||| | | Sbjct: 81130 ggttcgggtattggcgctgtcggcagcggcctcggtaaagctgggaaattcatgggcaag 81189 Query: 1680 actgtgacagggcacttgggcatatctcgtaagagtggtagcagctccactgttccccaa 1739 |||||| | |||| || | || || || |||| ||||||||||| |||| |||||| Sbjct: 81190 actgtggccgggcctttcagtatgtcccggaagaacggtagcagctcaactgctccccag 81249 Query: 1740 cctgaccagccttctgcataacttgatgtacagtga 1775 |||| || |||||||| | |||||||||||||||| Sbjct: 81250 gctgaacaaccttctgcgtgacttgatgtacagtga 81285 Score = 91.7 bits (46), Expect = 9e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 729 cagctcaaggatctccaggtctttaccgttgttcgtgttgtatttcaactgtcagaagag 788 |||||||| ||||| || |||| ||| |||| ||||||||||||||||| ||||| ||| Sbjct: 73442 cagctcaaagatcttcaagtctacaccattgtccgtgttgtatttcaactatcagaggag 73501 Query: 789 attccctgcatctctgcttttgttgttgctctcctcgcagag 830 || || |||||||||||| ||||||||||||| || |||||| Sbjct: 73502 atcccttgcatctctgctgttgttgttgctcttcttgcagag 73543 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 438 caggtgaaatggttgaacaagcatcttagcaaactttggccttt 481 |||||||||||| ||||||||||||| |||||||| |||||||| Sbjct: 70942 caggtgaaatggctgaacaagcatctcagcaaactctggccttt 70985 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1219 aggtttatgatgaagacaaccttcagcaagacaagaggctaggtgtggctaaattagcag 1278 |||| ||||||||||||| |||||||||||||| | ||| ||||| |||||| |||||| Sbjct: 78740 aggtatatgatgaagacagacttcagcaagacaaaaagcttggtgtagctaaactagcag 78799 Query: 1279 tgaa 1282 |||| Sbjct: 78800 tgaa 78803
>emb|X96598.1|ATCALB A.thaliana mRNA for CaLB protein Length = 1836 Score = 85.7 bits (43), Expect = 6e-13 Identities = 136/167 (81%) Strand = Plus / Plus Query: 786 gagattccctgcatctctgcttttgttgttgctctcctcgcagagccagagcctaaaata 845 |||||||| ||||| |||||| ||||||||||||| || || |||||| | || | ||| Sbjct: 659 gagattccttgcatatctgctgttgttgttgctctacttgctgagccaaaaccaagaatt 718 Query: 846 cagtacacattgaaggctgttgggggtagtctgactgctattccaggactttctgatatg 905 | ||||| ||||||||||||| || || | || || ||||| ||||| ||||||||| Sbjct: 719 gattacactctgaaggctgttggtggaagcttaacagcaattcctggactatctgatatg 778 Query: 906 attgatgatactgtcaattcaattgtcaatgacatgctccagtggcc 952 |||||||||||||| || | || ||||| |||||||| |||||||| Sbjct: 779 attgatgatactgttgatactatcgtcaaagacatgcttcagtggcc 825 Score = 46.1 bits (23), Expect = 0.48 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1054 tgaagaataaggagttgattggtaaatctga 1084 ||||||||||||| |||||||| |||||||| Sbjct: 930 tgaagaataaggaattgattggaaaatctga 960
>dbj|AK227322.1| Arabidopsis thaliana mRNA for CaLB protein, complete cds, clone: RAFL14-01-P05 Length = 1806 Score = 81.8 bits (41), Expect = 9e-12 Identities = 149/185 (80%) Strand = Plus / Plus Query: 786 gagattccctgcatctctgcttttgttgttgctctcctcgcagagccagagcctaaaata 845 |||||||| || || |||||| ||||||||||||| || || |||||| | || | ||| Sbjct: 665 gagattccttgtatatctgctgttgttgttgctctacttgctgagccaaaaccaagaatt 724 Query: 846 cagtacacattgaaggctgttgggggtagtctgactgctattccaggactttctgatatg 905 | ||||| ||||||||||||| || || | || || ||||| ||||| ||||||||| Sbjct: 725 gattacactctgaaggctgttggtggaagcttaacagcaattcctggactatctgatatg 784 Query: 906 attgatgatactgtcaattcaattgtcaatgacatgctccagtggccacacagggttgtt 965 |||||||||||||| || | || ||||| |||||||| |||||||| || || ||||| Sbjct: 785 attgatgatactgttgatactatcgtcaaagacatgcttcagtggcctcatagaattgtt 844 Query: 966 gttcc 970 ||||| Sbjct: 845 gttcc 849 Score = 46.1 bits (23), Expect = 0.48 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1054 tgaagaataaggagttgattggtaaatctga 1084 ||||||||||||| |||||||| |||||||| Sbjct: 936 tgaagaataaggaattgattggaaaatctga 966
>ref|NM_115969.2| Arabidopsis thaliana lipid binding (AT3G61050) mRNA, complete cds Length = 1837 Score = 81.8 bits (41), Expect = 9e-12 Identities = 149/185 (80%) Strand = Plus / Plus Query: 786 gagattccctgcatctctgcttttgttgttgctctcctcgcagagccagagcctaaaata 845 |||||||| || || |||||| ||||||||||||| || || |||||| | || | ||| Sbjct: 665 gagattccttgtatatctgctgttgttgttgctctacttgctgagccaaaaccaagaatt 724 Query: 846 cagtacacattgaaggctgttgggggtagtctgactgctattccaggactttctgatatg 905 | ||||| ||||||||||||| || || | || || ||||| ||||| ||||||||| Sbjct: 725 gattacactctgaaggctgttggtggaagcttaacagcaattcctggactatctgatatg 784 Query: 906 attgatgatactgtcaattcaattgtcaatgacatgctccagtggccacacagggttgtt 965 |||||||||||||| || | || ||||| |||||||| |||||||| || || ||||| Sbjct: 785 attgatgatactgttgatactatcgtcaaagacatgcttcagtggcctcatagaattgtt 844 Query: 966 gttcc 970 ||||| Sbjct: 845 gttcc 849 Score = 46.1 bits (23), Expect = 0.48 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1054 tgaagaataaggagttgattggtaaatctga 1084 ||||||||||||| |||||||| |||||||| Sbjct: 936 tgaagaataaggaattgattggaaaatctga 966
>ref|NM_001035831.1| Arabidopsis thaliana lipid binding (AT3G61050) mRNA, complete cds Length = 1920 Score = 81.8 bits (41), Expect = 9e-12 Identities = 149/185 (80%) Strand = Plus / Plus Query: 786 gagattccctgcatctctgcttttgttgttgctctcctcgcagagccagagcctaaaata 845 |||||||| || || |||||| ||||||||||||| || || |||||| | || | ||| Sbjct: 723 gagattccttgtatatctgctgttgttgttgctctacttgctgagccaaaaccaagaatt 782 Query: 846 cagtacacattgaaggctgttgggggtagtctgactgctattccaggactttctgatatg 905 | ||||| ||||||||||||| || || | || || ||||| ||||| ||||||||| Sbjct: 783 gattacactctgaaggctgttggtggaagcttaacagcaattcctggactatctgatatg 842 Query: 906 attgatgatactgtcaattcaattgtcaatgacatgctccagtggccacacagggttgtt 965 |||||||||||||| || | || ||||| |||||||| |||||||| || || ||||| Sbjct: 843 attgatgatactgttgatactatcgtcaaagacatgcttcagtggcctcatagaattgtt 902 Query: 966 gttcc 970 ||||| Sbjct: 903 gttcc 907 Score = 46.1 bits (23), Expect = 0.48 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1054 tgaagaataaggagttgattggtaaatctga 1084 ||||||||||||| |||||||| |||||||| Sbjct: 994 tgaagaataaggaattgattggaaaatctga 1024
>gb|BT004564.1| Arabidopsis thaliana At3g61050 gene, complete cds Length = 1533 Score = 81.8 bits (41), Expect = 9e-12 Identities = 149/185 (80%) Strand = Plus / Plus Query: 786 gagattccctgcatctctgcttttgttgttgctctcctcgcagagccagagcctaaaata 845 |||||||| || || |||||| ||||||||||||| || || |||||| | || | ||| Sbjct: 553 gagattccttgtatatctgctgttgttgttgctctacttgctgagccaaaaccaagaatt 612 Query: 846 cagtacacattgaaggctgttgggggtagtctgactgctattccaggactttctgatatg 905 | ||||| ||||||||||||| || || | || || ||||| ||||| ||||||||| Sbjct: 613 gattacactctgaaggctgttggtggaagcttaacagcaattcctggactatctgatatg 672 Query: 906 attgatgatactgtcaattcaattgtcaatgacatgctccagtggccacacagggttgtt 965 |||||||||||||| || | || ||||| |||||||| |||||||| || || ||||| Sbjct: 673 attgatgatactgttgatactatcgtcaaagacatgcttcagtggcctcatagaattgtt 732 Query: 966 gttcc 970 ||||| Sbjct: 733 gttcc 737 Score = 46.1 bits (23), Expect = 0.48 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1054 tgaagaataaggagttgattggtaaatctga 1084 ||||||||||||| |||||||| |||||||| Sbjct: 824 tgaagaataaggaattgattggaaaatctga 854
>emb|BX824688.1|CNS0A4QD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH64ZF03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1924 Score = 81.8 bits (41), Expect = 9e-12 Identities = 149/185 (80%) Strand = Plus / Plus Query: 786 gagattccctgcatctctgcttttgttgttgctctcctcgcagagccagagcctaaaata 845 |||||||| || || |||||| ||||||||||||| || || |||||| | || | ||| Sbjct: 795 gagattccttgtatatctgctgttgttgttgctctacttgctgagccaaaaccaagaatt 854 Query: 846 cagtacacattgaaggctgttgggggtagtctgactgctattccaggactttctgatatg 905 | ||||| ||||||||||||| || || | || || ||||| ||||| ||||||||| Sbjct: 855 gattacactctgaaggctgttggtggaagcttaacagcaattcctggactatctgatatg 914 Query: 906 attgatgatactgtcaattcaattgtcaatgacatgctccagtggccacacagggttgtt 965 |||||||||||||| || | || ||||| |||||||| |||||||| || || ||||| Sbjct: 915 attgatgatactgttgatactatcgtcaaagacatgcttcagtggcctcatagaattgtt 974 Query: 966 gttcc 970 ||||| Sbjct: 975 gttcc 979 Score = 46.1 bits (23), Expect = 0.48 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1054 tgaagaataaggagttgattggtaaatctga 1084 ||||||||||||| |||||||| |||||||| Sbjct: 1065 tgaagaataaggaattgattggaaaatctga 1095
>gb|AC174347.10| Medicago truncatula clone mth2-173b11, complete sequence Length = 119146 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Minus Query: 912 gatactgtcaattcaattgtcaatgacatgctccagtggccacacagggttgttgttcca 971 |||||||| || ||||||| | ||| |||||||| |||||||| ||| ||||||||||| Sbjct: 47270 gatactgtgaacacaattgttactgatatgctccaatggccacataggattgttgttcca 47211 Query: 972 cttgg 976 ||||| Sbjct: 47210 cttgg 47206 Score = 50.1 bits (25), Expect = 0.030 Identities = 49/57 (85%) Strand = Plus / Minus Query: 1168 aaacatttgaattgattgttgaagacaaggaaacccaatctgtcatttttgaggttt 1224 |||||||||| ||||||| ||||||||||| ||||| || ||||| ||||||||| Sbjct: 46895 aaacatttgagttgattgcagaagacaaggagacccagtcactcattcttgaggttt 46839 Score = 50.1 bits (25), Expect = 0.030 Identities = 37/41 (90%) Strand = Plus / Minus Query: 642 caaatcataatggatatagatttccgttggggtggtgatcc 682 |||||||||||||| ||||| |||| |||||||||||||| Sbjct: 48684 caaatcataatggacgtagatctccgctggggtggtgatcc 48644 Score = 46.1 bits (23), Expect = 0.48 Identities = 50/59 (84%) Strand = Plus / Minus Query: 762 cgtgttgtatttcaactgtcagaagagattccctgcatctctgcttttgttgttgctct 820 |||||| |||| ||||| | |||||||| || ||||| |||||| ||||||||||||| Sbjct: 48464 cgtgttatattccaacttgctgaagagatcccttgcatttctgctgttgttgttgctct 48406 Score = 42.1 bits (21), Expect = 7.4 Identities = 48/57 (84%) Strand = Plus / Minus Query: 856 tgaaggctgttgggggtagtctgactgctattccaggactttctgatatgattgatg 912 |||| |||||||| || ||| | |||||| |||| ||| |||| ||||||||||||| Sbjct: 47453 tgaaagctgttggtggaagtttaactgctcttcctggaatttcagatatgattgatg 47397
>dbj|AB001389.1| Solanum lycopersicum mRNA for CLB1, complete cds Length = 1929 Score = 52.0 bits (26), Expect = 0.008 Identities = 71/86 (82%) Strand = Plus / Plus Query: 886 ttccaggactttctgatatgattgatgatactgtcaattcaattgtcaatgacatgctcc 945 |||| |||||||| |||||||||||||| ||||| ||| |||| || | |||||||| Sbjct: 860 ttcctggactttcagatatgattgatgacactgtaaatacaatagtgacagacatgctag 919 Query: 946 agtggccacacagggttgttgttcca 971 | ||||| ||||| ||||||||||| Sbjct: 920 aatggccgcacagaattgttgttcca 945 Score = 48.1 bits (24), Expect = 0.12 Identities = 75/92 (81%) Strand = Plus / Plus Query: 1116 ttcaaggtcaaaacaaaagtcatagacgacaacctaaatcctgaatggaatgaaacattt 1175 |||||||| || |||||| ||| ||| ||||||||||||||| ||| || | || ||| Sbjct: 1087 ttcaaggttaagacaaaaaccattgacaacaacctaaatcctgtttgggatcagacgttt 1146 Query: 1176 gaattgattgttgaagacaaggaaacccaatc 1207 ||||| |||| ||||||||||| || ||||| Sbjct: 1147 gaattaattgcagaagacaaggagacgcaatc 1178 Score = 42.1 bits (21), Expect = 7.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 513 gaatcagttgaaccactgctagatgattatcgacctccaggaataaaatctttgaagttc 572 ||||| |||||||| || |||| |||||||||||||| ||||| | || ||||||||| Sbjct: 484 gaatctgttgaacctcttttagaagattatcgacctcctggaattacttcattgaagttc 543 Query: 573 a 573 | Sbjct: 544 a 544 Score = 42.1 bits (21), Expect = 7.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 642 caaatcataatggatatagatttccgttggggtggtgatcc 682 ||||||| ||||||||||| |||| |||||||||||||| Sbjct: 613 caaatcactatggatatagacctccgatggggtggtgatcc 653
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Minus Query: 795 tgcatctctgcttttgttgttgctctcctcgcagag 830 |||||||||||| ||||||||||||| || |||||| Sbjct: 7960137 tgcatctctgctgttgttgttgctcttctggcagag 7960102 Score = 42.1 bits (21), Expect = 7.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 234 atggggttcctctcgggggtggtgatggg 262 ||||||||| | ||||||||||||||||| Sbjct: 7961763 atggggttcatatcgggggtggtgatggg 7961735
>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0081I10, complete sequence Length = 143298 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Minus Query: 795 tgcatctctgcttttgttgttgctctcctcgcagag 830 |||||||||||| ||||||||||||| || |||||| Sbjct: 29665 tgcatctctgctgttgttgttgctcttctggcagag 29630 Score = 42.1 bits (21), Expect = 7.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 234 atggggttcctctcgggggtggtgatggg 262 ||||||||| | ||||||||||||||||| Sbjct: 31291 atggggttcatatcgggggtggtgatggg 31263
>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030J04, complete sequence Length = 153431 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Minus Query: 795 tgcatctctgcttttgttgttgctctcctcgcagag 830 |||||||||||| ||||||||||||| || |||||| Sbjct: 147900 tgcatctctgctgttgttgttgctcttctggcagag 147865 Score = 42.1 bits (21), Expect = 7.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 234 atggggttcctctcgggggtggtgatggg 262 ||||||||| | ||||||||||||||||| Sbjct: 149526 atggggttcatatcgggggtggtgatggg 149498
>dbj|AP006659.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT12L15, TM0344, complete sequence Length = 87645 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 248 gggggtggtgatggggttggtggt 271 |||||||||||||||||||||||| Sbjct: 52236 gggggtggtgatggggttggtggt 52213
>gb|AC098619.8| Rattus norvegicus BAC CH230-125E15 () complete sequence Length = 251205 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Minus Query: 571 tcaacaaattctctcttggaaat 593 ||||||||||||||||||||||| Sbjct: 82361 tcaacaaattctctcttggaaat 82339
>gb|AC170584.4| Mus musculus chromosome 1, clone RP24-360E22, complete sequence Length = 162582 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1178 attgattgttgaagacaaggaaa 1200 ||||||||||||||||||||||| Sbjct: 91060 attgattgttgaagacaaggaaa 91038
>ref|XM_452823.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C13948g predicted mRNA Length = 2427 Score = 46.1 bits (23), Expect = 0.48 Identities = 26/27 (96%) Strand = Plus / Plus Query: 444 aaatggttgaacaagcatcttagcaaa 470 |||||||||||||||||||| |||||| Sbjct: 1916 aaatggttgaacaagcatctgagcaaa 1942
>gb|AC091458.5| Mus musculus chromosome 12, clone RP23-68M8, complete sequence Length = 289751 Score = 46.1 bits (23), Expect = 0.48 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1438 cagaaaagaaagcaatagaggagagaaagcg 1468 ||||||||||||||||||| |||| |||||| Sbjct: 75821 cagaaaagaaagcaatagatgagacaaagcg 75851
>gb|AC119230.16| Mus musculus chromosome 1, clone RP24-210L3, complete sequence Length = 160913 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1178 attgattgttgaagacaaggaaa 1200 ||||||||||||||||||||||| Sbjct: 78188 attgattgttgaagacaaggaaa 78210
>gb|AC131103.4| Mus musculus BAC clone RP23-213K14 from chromosome 19, complete sequence Length = 210370 Score = 46.1 bits (23), Expect = 0.48 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1439 agaaaagaaagcaatagaggagagaaa 1465 ||||||||||| ||||||||||||||| Sbjct: 62362 agaaaagaaagaaatagaggagagaaa 62336
>gb|AC006944.13| Mus musculus strain 129S6/SvEvTac clone rp22-225p5 map 1q21-23, complete sequence Length = 120888 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1178 attgattgttgaagacaaggaaa 1200 ||||||||||||||||||||||| Sbjct: 57139 attgattgttgaagacaaggaaa 57117
>gb|AC008100.71| Mus musculus strain 129X1/SvJ ES cell line RW4 chromosome 1q21-23 clone mgs1-423c02, complete sequence Length = 220020 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1178 attgattgttgaagacaaggaaa 1200 ||||||||||||||||||||||| Sbjct: 26378 attgattgttgaagacaaggaaa 26356 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1178 attgattgttgaagacaaggaaa 1200 ||||||||||||||||||||||| Sbjct: 100347 attgattgttgaagacaaggaaa 100325 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1178 attgattgttgaagacaaggaaa 1200 ||||||||||||||||||||||| Sbjct: 172014 attgattgttgaagacaaggaaa 171992
>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1753957 Score = 46.1 bits (23), Expect = 0.48 Identities = 26/27 (96%) Strand = Plus / Minus Query: 444 aaatggttgaacaagcatcttagcaaa 470 |||||||||||||||||||| |||||| Sbjct: 1198917 aaatggttgaacaagcatctgagcaaa 1198891
>emb|AL358732.1|ATT27I15 Arabidopsis thaliana DNA chromosome 3, BAC clone T27I15 Length = 112584 Score = 46.1 bits (23), Expect = 0.48 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1054 tgaagaataaggagttgattggtaaatctga 1084 ||||||||||||| |||||||| |||||||| Sbjct: 24603 tgaagaataaggaattgattggaaaatctga 24633 Score = 46.1 bits (23), Expect = 0.48 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1054 tgaagaataaggagttgattggtaaatctga 1084 ||||||||||||| |||||||| |||||||| Sbjct: 85784 tgaagaataaggaattgattggaaaatctga 85814 Score = 46.1 bits (23), Expect = 0.48 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1054 tgaagaataaggagttgattggtaaatctga 1084 ||||||||||||| |||||||| |||||||| Sbjct: 97855 tgaagaataaggaattgattggaaaatctga 97885 Score = 42.1 bits (21), Expect = 7.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1168 aaacatttgaattgattgttgaagacaaggaaaccca 1204 ||||||| ||||||||||| || ||||| |||||||| Sbjct: 24716 aaacattcgaattgattgtagaggacaaagaaaccca 24752 Score = 42.1 bits (21), Expect = 7.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1168 aaacatttgaattgattgttgaagacaaggaaaccca 1204 ||||||| ||||||||||| || ||||| |||||||| Sbjct: 85897 aaacattcgaattgattgtagaggacaaagaaaccca 85933 Score = 42.1 bits (21), Expect = 7.4 Identities = 48/57 (84%) Strand = Plus / Plus Query: 856 tgaaggctgttgggggtagtctgactgctattccaggactttctgatatgattgatg 912 ||||||||||||| || || | || || ||||| ||||| |||||||||||||||| Sbjct: 97361 tgaaggctgttggtggaagcttaacagcaattcctggactatctgatatgattgatg 97417
>gb|AC140263.3| Mus musculus BAC clone RP24-299F13 from chromosome 17, complete sequence Length = 158695 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1439 agaaaagaaagcaatagaggaga 1461 ||||||||||||||||||||||| Sbjct: 148200 agaaaagaaagcaatagaggaga 148178
>gb|AC108421.8| Mus musculus chromosome 19, clone RP23-433N7, complete sequence Length = 190980 Score = 46.1 bits (23), Expect = 0.48 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1439 agaaaagaaagcaatagaggagagaaa 1465 ||||||||||| ||||||||||||||| Sbjct: 169674 agaaaagaaagaaatagaggagagaaa 169648
>gb|AC118013.20| Mus musculus chromosome 1, clone RP23-455M18, complete sequence Length = 183224 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1178 attgattgttgaagacaaggaaa 1200 ||||||||||||||||||||||| Sbjct: 127940 attgattgttgaagacaaggaaa 127918
>emb|AL591207.15| Mouse DNA sequence from clone RP23-392O3 on chromosome 12, complete sequence Length = 211056 Score = 46.1 bits (23), Expect = 0.48 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1438 cagaaaagaaagcaatagaggagagaaagcg 1468 ||||||||||||||||||| |||| |||||| Sbjct: 31770 cagaaaagaaagcaatagatgagacaaagcg 31740
>emb|CT835338.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA236E11, full insert sequence Length = 948 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 ggtggtgatggggttggtggtcggcgtcgt 280 ||||||| ||||| |||||||||||||||| Sbjct: 187 ggtggtggtgggggtggtggtcggcgtcgt 158
>ref|NM_001052302.1| Oryza sativa (japonica cultivar-group) Os02g0128100 (Os02g0128100) mRNA, complete cds Length = 510 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 ggtggtgatggggttggtggtcggcgtcgt 280 ||||||| ||||| |||||||||||||||| Sbjct: 76 ggtggtggtgggggtggtggtcggcgtcgt 47
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 805 cttttgttgttgctctcctcgc 826 |||||||||||||||||||||| Sbjct: 15913686 cttttgttgttgctctcctcgc 15913665 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1164 aatgaaacatttgaattgatt 1184 ||||||||||||||||||||| Sbjct: 15683736 aatgaaacatttgaattgatt 15683756 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1164 aatgaaacatttgaattgatt 1184 ||||||||||||||||||||| Sbjct: 15718733 aatgaaacatttgaattgatt 15718753
>gb|CP000383.1| Cytophaga hutchinsonii ATCC 33406, complete genome Length = 4433218 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 470 actttggccttttgtttcacaa 491 |||||||||||||||||||||| Sbjct: 2788116 actttggccttttgtttcacaa 2788137
>ref|XM_979444.1| PREDICTED: Mus musculus gene model 454, (NCBI) (Gm454), mRNA Length = 1387 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1733 tccccaacctgaccagccttct 1754 |||||||||||||||||||||| Sbjct: 296 tccccaacctgaccagccttct 317
>ref|XM_984193.1| PREDICTED: Mus musculus gene model 454, (NCBI) (Gm454), mRNA Length = 1183 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1733 tccccaacctgaccagccttct 1754 |||||||||||||||||||||| Sbjct: 143 tccccaacctgaccagccttct 164
>ref|XM_001000527.1| PREDICTED: Mus musculus gene model 454, (NCBI) (Gm454), mRNA Length = 1183 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1733 tccccaacctgaccagccttct 1754 |||||||||||||||||||||| Sbjct: 143 tccccaacctgaccagccttct 164
>ref|NM_100511.1| Arabidopsis thaliana ACX3 (ACYL-COA OXIDASE 3); acyl-CoA oxidase (ACX3) mRNA, complete cds Length = 2028 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 570 ttcaacaaattctctcttggaa 591 |||||||||||||||||||||| Sbjct: 908 ttcaacaaattctctcttggaa 887
>ref|NM_001013773.2| Mus musculus cDNA sequence BC055004 (BC055004), mRNA gb|BC106195.1| Mus musculus cDNA sequence BC055004, mRNA (cDNA clone MGC:118496 IMAGE:6396133), complete cds Length = 3378 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1733 tccccaacctgaccagccttct 1754 |||||||||||||||||||||| Sbjct: 423 tccccaacctgaccagccttct 444
>gb|AC159257.2| Mus musculus BAC clone RP24-86H20 from chromosome 5, complete sequence Length = 202099 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1733 tccccaacctgaccagccttct 1754 |||||||||||||||||||||| Sbjct: 110652 tccccaacctgaccagccttct 110631 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1733 tccccaacctgaccagccttct 1754 |||||||||||||||||||||| Sbjct: 145938 tccccaacctgaccagccttct 145959
>gb|AC115484.2| Drosophila melanogaster clone BACR06K01, complete sequence Length = 168504 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 805 cttttgttgttgctctcctcgc 826 |||||||||||||||||||||| Sbjct: 160695 cttttgttgttgctctcctcgc 160674
>gb|BC055004.1| Mus musculus cDNA sequence BC055004, mRNA (cDNA clone MGC:57066 IMAGE:6478735), complete cds Length = 2596 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1733 tccccaacctgaccagccttct 1754 |||||||||||||||||||||| Sbjct: 241 tccccaacctgaccagccttct 262
>gb|BT008413.1| Arabidopsis thaliana At1g06290 gene, complete cds Length = 2028 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 570 ttcaacaaattctctcttggaa 591 |||||||||||||||||||||| Sbjct: 908 ttcaacaaattctctcttggaa 887
>dbj|AK138922.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530006K22 product:hypothetical protein, full insert sequence Length = 754 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1733 tccccaacctgaccagccttct 1754 |||||||||||||||||||||| Sbjct: 296 tccccaacctgaccagccttct 317
>dbj|AK156114.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830008F20 product:hypothetical protein, full insert sequence Length = 2381 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1733 tccccaacctgaccagccttct 1754 |||||||||||||||||||||| Sbjct: 627 tccccaacctgaccagccttct 648
>dbj|AK154713.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630104E04 product:hypothetical protein, full insert sequence Length = 1554 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1733 tccccaacctgaccagccttct 1754 |||||||||||||||||||||| Sbjct: 1234 tccccaacctgaccagccttct 1255
>gb|AC157588.8| Mus musculus BAC clone RP24-95J4 from chromosome 5, complete sequence Length = 220137 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1733 tccccaacctgaccagccttct 1754 |||||||||||||||||||||| Sbjct: 156205 tccccaacctgaccagccttct 156184 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1733 tccccaacctgaccagccttct 1754 |||||||||||||||||||||| Sbjct: 191491 tccccaacctgaccagccttct 191512
>dbj|AK171365.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730044C15 product:hypothetical protein, full insert sequence Length = 1554 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1733 tccccaacctgaccagccttct 1754 |||||||||||||||||||||| Sbjct: 1234 tccccaacctgaccagccttct 1255
>gb|AY099579.1| Arabidopsis thaliana acyl-CoA oxidase ACX3 (At1g06290) mRNA, complete cds Length = 2375 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 570 ttcaacaaattctctcttggaa 591 |||||||||||||||||||||| Sbjct: 979 ttcaacaaattctctcttggaa 958
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 ggtggtgatggggttggtggtcggcgtcgt 280 ||||||| ||||| |||||||||||||||| Sbjct: 1453553 ggtggtggtgggggtggtggtcggcgtcgt 1453524
>emb|Z83313.1|HS106C24 Human DNA sequence from clone RP1-106C24 on chromosome X Contains a tropomyosin 2 (beta) (TPM2) pseudogene, complete sequence Length = 93959 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 799 tctctgcttttgttgttgctct 820 |||||||||||||||||||||| Sbjct: 56145 tctctgcttttgttgttgctct 56166
>gb|AC092395.1|AC092395 Drosophila melanogaster, chromosome 2L, region 36C-36D, BAC clone BACR12D02, complete sequence Length = 164414 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 805 cttttgttgttgctctcctcgc 826 |||||||||||||||||||||| Sbjct: 34050 cttttgttgttgctctcctcgc 34029
>gb|AC068143.4|T2D23 Sequence of BAC T2D23 from Arabidopsis thaliana chromosome 1, complete sequence Length = 41039 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 570 ttcaacaaattctctcttggaa 591 |||||||||||||||||||||| Sbjct: 1891 ttcaacaaattctctcttggaa 1870
>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0482F12 Length = 147735 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 ggtggtgatggggttggtggtcggcgtcgt 280 ||||||| ||||| |||||||||||||||| Sbjct: 134825 ggtggtggtgggggtggtggtcggcgtcgt 134796
>gb|AC084456.1|AC084456 Caenorhabditis briggsae cosmid CB029P18, complete sequence Length = 87408 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1432 tggagtcagaaaagaaagcaatagag 1457 |||||||||||||||| ||||||||| Sbjct: 60618 tggagtcagaaaagaaggcaatagag 60643
>gb|AF253474.1|AF253474 Arabidopsis thaliana acyl-CoA oxidase (ACX3) mRNA, complete cds Length = 2246 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 570 ttcaacaaattctctcttggaa 591 |||||||||||||||||||||| Sbjct: 961 ttcaacaaattctctcttggaa 940
>dbj|AK176257.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL23-16-C12 Length = 2295 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 570 ttcaacaaattctctcttggaa 591 |||||||||||||||||||||| Sbjct: 979 ttcaacaaattctctcttggaa 958
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0576F08 Length = 135314 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 ggtggtgatggggttggtggtcggcgtcgt 280 ||||||| ||||| |||||||||||||||| Sbjct: 16974 ggtggtggtgggggtggtggtcggcgtcgt 16945
>gb|AF207994.1|AF207994 Arabidopsis thaliana acyl-CoA oxidase ACX3 (ACX3) mRNA, complete cds Length = 2304 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 570 ttcaacaaattctctcttggaa 591 |||||||||||||||||||||| Sbjct: 953 ttcaacaaattctctcttggaa 932
>gb|AY108443.1| Zea mays PCO082434 mRNA sequence Length = 1548 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 877 tgactgctattccaggactttctgat 902 ||||||||||||||||| |||||||| Sbjct: 140 tgactgctattccaggaatttctgat 165
>emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on chromosome 1, complete sequence Length = 182054 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1420 aactggaagccctggagtcaga 1441 |||||||||||||||||||||| Sbjct: 21699 aactggaagccctggagtcaga 21678
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 gcggcgcaccaggaagcgcgt 331 ||||||||||||||||||||| Sbjct: 545727 gcggcgcaccaggaagcgcgt 545747
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 gcggcgcaccaggaagcgcgt 331 ||||||||||||||||||||| Sbjct: 532928 gcggcgcaccaggaagcgcgt 532948
>gb|AC157694.2| Xenopus tropicalis clone ISB1-18D4, complete sequence Length = 50048 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1859 atataaactatttgttggtta 1879 ||||||||||||||||||||| Sbjct: 9804 atataaactatttgttggtta 9824
>ref|NM_115959.1| Arabidopsis thaliana unknown protein (AT3G60950) mRNA, complete cds Length = 1779 Score = 42.1 bits (21), Expect = 7.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1168 aaacatttgaattgattgttgaagacaaggaaaccca 1204 ||||||| ||||||||||| || ||||| |||||||| Sbjct: 677 aaacattcgaattgattgtagaggacaaagaaaccca 713
>ref|NM_115967.1| Arabidopsis thaliana unknown protein (AT3G61030) mRNA, complete cds Length = 1779 Score = 42.1 bits (21), Expect = 7.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1168 aaacatttgaattgattgttgaagacaaggaaaccca 1204 ||||||| ||||||||||| || ||||| |||||||| Sbjct: 677 aaacattcgaattgattgtagaggacaaagaaaccca 713
>gb|DQ198149.1| Plasmodium falciparum merozoite-associated tryptophan-rich antigen 2 gene, complete cds Length = 6783 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1213 tttttgaggtttatgatgaagacaa 1237 ||||||||||||||| ||||||||| Sbjct: 80 tttttgaggtttatgttgaagacaa 104
>gb|AY389920.1| Protopterus dolloi protein kinase C beta 1 mRNA, partial cds Length = 1240 Score = 42.1 bits (21), Expect = 7.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1152 aatcctgaatggaatgaaacatttgaatt 1180 ||||| |||||||||||||||||| |||| Sbjct: 452 aatccagaatggaatgaaacatttaaatt 480
>gb|AY658819.1| Synthetic construct Peudomonas aeruginosa clone FLH042192.01F PA0471 gene, partial cds Length = 972 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 gcggcgcaccaggaagcgcgt 331 ||||||||||||||||||||| Sbjct: 585 gcggcgcaccaggaagcgcgt 565
>gb|AC149429.1| Populus trichocarpa clone Pop1-109D09, complete sequence Length = 94633 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 558 aaatctttgaagttcaacaaa 578 ||||||||||||||||||||| Sbjct: 37817 aaatctttgaagttcaacaaa 37837
>gb|AC122397.2| Mus musculus BAC clone RP24-90D21 from chromosome 15, complete sequence Length = 181742 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1434 gagtcagaaaagaaagcaata 1454 ||||||||||||||||||||| Sbjct: 85580 gagtcagaaaagaaagcaata 85560
>gb|AC011296.3| Homo sapiens BAC clone RP11-96K1 from 7, complete sequence Length = 130513 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1397 tcatccatttaccaaggaagaacaa 1421 |||||| |||||||||||||||||| Sbjct: 23707 tcatccttttaccaaggaagaacaa 23683
>gb|AC140734.5| Rattus norvegicus BAC CH230-55I15 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 230896 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1870 ttgttggttactttattgtattcta 1894 ||||||||||||||||||| ||||| Sbjct: 56222 ttgttggttactttattgtgttcta 56198
>gb|AC092440.5| Homo sapiens BAC clone RP11-453O5 from 4, complete sequence Length = 164781 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1686 acagggcacttgggcatatct 1706 ||||||||||||||||||||| Sbjct: 141095 acagggcacttgggcatatct 141115
>gb|AC129293.9| Mus musculus BAC clone RP24-535M14 from chromosome 3, complete sequence Length = 163981 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 558 aaatctttgaagttcaacaaa 578 ||||||||||||||||||||| Sbjct: 106574 aaatctttgaagttcaacaaa 106554
>gb|AC154198.3| Mus musculus BAC clone RP24-393P24 from chromosome 13, complete sequence Length = 142792 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1441 aaaagaaagcaatagaggaga 1461 ||||||||||||||||||||| Sbjct: 65067 aaaagaaagcaatagaggaga 65087
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 gcaccaggaagcgcgtcgcca 336 ||||||||||||||||||||| Sbjct: 110910 gcaccaggaagcgcgtcgcca 110890
>emb|AL034557.8|PFMAL4P1 Plasmodium falciparum MAL4P1 Length = 347582 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1213 tttttgaggtttatgatgaagacaa 1237 ||||||||||||||| ||||||||| Sbjct: 140846 tttttgaggtttatgttgaagacaa 140822
>emb|AL592222.11| Mouse DNA sequence from clone RP23-366M19 on chromosome 11 Contains a ribosomal protein L13a (Rpl13a) pseudogene, the 5' end of a novel gene, the gene for peptidyl-tRNA hydrolase 2, mitochondrial precursor (PTH2), the Cltc gene for clathrin heavy polypeptide (Hc) and the 3' end of the Dhx40 gene for DEAH (Asp-Glu-Ala-His) box polypeptide 40, complete sequence Length = 160796 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 798 atctctgcttttgttgttgct 818 ||||||||||||||||||||| Sbjct: 150850 atctctgcttttgttgttgct 150830
>emb|BX322637.7| Zebrafish DNA sequence from clone DKEY-22A1 in linkage group 9, complete sequence Length = 178563 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 gagcgtataatctttaattag 102 ||||||||||||||||||||| Sbjct: 11189 gagcgtataatctttaattag 11209
>gb|AC156029.2| Mus musculus BAC clone RP23-42O8 from chromosome 5, complete sequence Length = 235471 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1307 tgaaatcactctgaagcttatgcag 1331 |||||||||||||||||||| |||| Sbjct: 218294 tgaaatcactctgaagcttaggcag 218270
>emb|BX537274.3| Zebrafish DNA sequence from clone DKEY-103L3 in linkage group 13, complete sequence Length = 151298 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 560 atctttgaagttcaacaaatt 580 ||||||||||||||||||||| Sbjct: 75153 atctttgaagttcaacaaatt 75133
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 gcggcgcaccaggaagcgcgt 331 ||||||||||||||||||||| Sbjct: 428436 gcggcgcaccaggaagcgcgt 428456
>gb|AF051691.1|AF051691 Pseudomonas aeruginosa stress factor A (psfA), ECF sigma factor (fiuI), transmembrane sensor (fiuR), and hydroxamate-type ferrisiderophore receptor (fiuA) genes, complete cds Length = 5359 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 gcggcgcaccaggaagcgcgt 331 ||||||||||||||||||||| Sbjct: 2233 gcggcgcaccaggaagcgcgt 2213
>gb|AC112263.4| Mus musculus BAC clone RP23-403P24 from 5, complete sequence Length = 189091 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1307 tgaaatcactctgaagcttatgcag 1331 |||||||||||||||||||| |||| Sbjct: 185892 tgaaatcactctgaagcttaggcag 185916
>emb|AL010241.1|PFSC04066 Plasmodium falciparum DNA *** SEQUENCING IN PROGRESS *** from contig 4-66, complete sequence Length = 5947 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1213 tttttgaggtttatgatgaagacaa 1237 ||||||||||||||| ||||||||| Sbjct: 474 tttttgaggtttatgttgaagacaa 498 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 351,638,335 Number of extensions: 18687482 Number of successful extensions: 369922 Number of sequences better than 10.0: 87 Number of HSP's gapped: 369911 Number of HSP's successfully gapped: 147 Length of query: 1942 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1919 Effective length of database: 18,503,978,556 Effective search space: 35509134848964 Effective search space used: 35509134848964 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
