ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf39c08 |
|---|---|
| Clone Library Name | barley_pub |
>Os01g0835900:Os01g0835900 | Length = 124 Score = 164 bits (415), Expect = 1e-40 Identities = 87/111 (78%), Positives = 89/111 (80%) Frame = +3 Query: 48 RSKGTAAEMSXXXXXXXXXXXXXXXXXXXVLRDNIQGITKPAIRRLARRGGVKRISGLIY 227 R + +AA MS VLRDNIQGITKPAIRRLARRGGVKRISGLIY Sbjct: 14 RGRASAAAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIY 73 Query: 228 EETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 380 EETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 74 EETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 124
>Os09g0553100:Os09g0553100 | Length = 103 Score = 162 bits (410), Expect = 5e-40 Identities = 82/82 (100%), Positives = 82/82 (100%) Frame = +3 Query: 135 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 314 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81 Query: 315 VTAMDVVYALKRQGRTLYGFGG 380 VTAMDVVYALKRQGRTLYGFGG Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>Os02g0684500:Os02g0684500 | Length = 103 Score = 162 bits (410), Expect = 5e-40 Identities = 82/82 (100%), Positives = 82/82 (100%) Frame = +3 Query: 135 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 314 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81 Query: 315 VTAMDVVYALKRQGRTLYGFGG 380 VTAMDVVYALKRQGRTLYGFGG Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>AK058436: | Length = 103 Score = 162 bits (410), Expect = 5e-40 Identities = 82/82 (100%), Positives = 82/82 (100%) Frame = +3 Query: 135 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 314 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81 Query: 315 VTAMDVVYALKRQGRTLYGFGG 380 VTAMDVVYALKRQGRTLYGFGG Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>AK119699:Os10g0539500 | Length = 103 Score = 162 bits (410), Expect = 5e-40 Identities = 82/82 (100%), Positives = 82/82 (100%) Frame = +3 Query: 135 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 314 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81 Query: 315 VTAMDVVYALKRQGRTLYGFGG 380 VTAMDVVYALKRQGRTLYGFGG Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>AK119240:Os05g0466600 | Length = 103 Score = 162 bits (410), Expect = 5e-40 Identities = 82/82 (100%), Positives = 82/82 (100%) Frame = +3 Query: 135 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 314 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81 Query: 315 VTAMDVVYALKRQGRTLYGFGG 380 VTAMDVVYALKRQGRTLYGFGG Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>AK105816:Os05g0462700 | Length = 103 Score = 162 bits (410), Expect = 5e-40 Identities = 82/82 (100%), Positives = 82/82 (100%) Frame = +3 Query: 135 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 314 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81 Query: 315 VTAMDVVYALKRQGRTLYGFGG 380 VTAMDVVYALKRQGRTLYGFGG Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>AK059098:Os10g0539500 | Length = 103 Score = 162 bits (410), Expect = 5e-40 Identities = 82/82 (100%), Positives = 82/82 (100%) Frame = +3 Query: 135 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 314 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81 Query: 315 VTAMDVVYALKRQGRTLYGFGG 380 VTAMDVVYALKRQGRTLYGFGG Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>AK059019:Os04g0583600 | Length = 103 Score = 162 bits (410), Expect = 5e-40 Identities = 82/82 (100%), Positives = 82/82 (100%) Frame = +3 Query: 135 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 314 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81 Query: 315 VTAMDVVYALKRQGRTLYGFGG 380 VTAMDVVYALKRQGRTLYGFGG Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>AK058741:Os03g0119900 | Length = 103 Score = 162 bits (410), Expect = 5e-40 Identities = 82/82 (100%), Positives = 82/82 (100%) Frame = +3 Query: 135 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 314 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81 Query: 315 VTAMDVVYALKRQGRTLYGFGG 380 VTAMDVVYALKRQGRTLYGFGG Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>AK058686:Os09g0433600 | Length = 103 Score = 162 bits (410), Expect = 5e-40 Identities = 82/82 (100%), Positives = 82/82 (100%) Frame = +3 Query: 135 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 314 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81 Query: 315 VTAMDVVYALKRQGRTLYGFGG 380 VTAMDVVYALKRQGRTLYGFGG Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>Os07g0549900:Os07g0549900 | Length = 253 Score = 115 bits (289), Expect = 5e-26 Identities = 56/85 (65%), Positives = 57/85 (67%) Frame = +2 Query: 125 PPEGAARQHPGHHQAGHPSPGAPRRREAHLGAHLRGDPRRAQDLXXXXXXXXXXXXXXXX 304 PPEGA RQHPG H+AG P G R EAHLGAHLRGDPR AQDL Sbjct: 148 PPEGAPRQHPGDHEAGDPEAGEEGRGEAHLGAHLRGDPRGAQDLPRERHPRRRHLHRARP 207 Query: 305 XQDRHRHGRRLRAQAPGPHPLRFRR 379 QDRHRHGRRLRAQAPGPHPLR RR Sbjct: 208 PQDRHRHGRRLRAQAPGPHPLRLRR 232
>AK062355: | Length = 100 Score = 104 bits (260), Expect = 1e-22 Identities = 49/80 (61%), Positives = 66/80 (82%) Frame = +3 Query: 135 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 314 VL+D+ + +TK +IRRLARR GVKRISGL+YEE RGVLK F+E V+RDA YTE+A+++T Sbjct: 21 VLKDSARSVTKGSIRRLARRAGVKRISGLLYEEVRGVLKSFVEGVVRDATAYTEYAKKRT 80 Query: 315 VTAMDVVYALKRQGRTLYGF 374 VT VV AL+++GR +YG+ Sbjct: 81 VTTGAVVAALRKRGRAIYGY 100
>D10397:Os10g0539500 | Length = 33 Score = 70.5 bits (171), Expect = 2e-12 Identities = 33/33 (100%), Positives = 33/33 (100%) Frame = +3 Query: 282 VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 380 VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 1 VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 33
>Os09g0433500:Os09g0433500 | Length = 781 Score = 47.4 bits (111), Expect = 2e-05 Identities = 33/86 (38%), Positives = 36/86 (41%) Frame = -2 Query: 386 MVTAETVEGAALALERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLLVDEPRDX 207 ++ AE VEGAALALE AGLLVDEPRD Sbjct: 326 LLAAEAVEGAALALEGVDDVHGGDGLAAGVLGVGDGVADDVLEEDLEHPAGLLVDEPRDA 385 Query: 206 XXXXXXXXATDGRLGDALDVVAQHLP 129 D RL D LDVVA+HLP Sbjct: 386 LHPAPPRQPPDRRLRDPLDVVAEHLP 411
>AK070042:Os04g0508200 | Length = 478 Score = 39.3 bits (90), Expect = 0.006 Identities = 25/45 (55%), Positives = 29/45 (64%), Gaps = 1/45 (2%) Frame = +2 Query: 1133 FPE*SSHRQHWQIDFMVAYAVKIEG*YIDVQK*ND-DIESDFLAQ 1264 F E S +H ID MVAYAVK EG Y+ K D D++SDFLAQ Sbjct: 303 FEENSIWYEHRLIDDMVAYAVKSEGGYVWACKNYDGDVQSDFLAQ 347
>AK061752:Os01g0654500 | Length = 412 Score = 36.6 bits (83), Expect = 0.039 Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = +2 Query: 1157 QHWQIDFMVAYAVKIEG*YIDVQK*ND-DIESDFLAQ 1264 +H ID MVAYA+K EG Y+ K D D++SDFLAQ Sbjct: 247 EHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQ 283
>AF155334:Os05g0573200 | Length = 412 Score = 36.6 bits (83), Expect = 0.039 Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = +2 Query: 1157 QHWQIDFMVAYAVKIEG*YIDVQK*ND-DIESDFLAQ 1264 +H ID MVAYA+K EG Y+ K D D++SDFLAQ Sbjct: 247 EHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQ 283
>AF155333:Os01g0654500 | Length = 412 Score = 36.6 bits (83), Expect = 0.039 Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = +2 Query: 1157 QHWQIDFMVAYAVKIEG*YIDVQK*ND-DIESDFLAQ 1264 +H ID MVAYA+K EG Y+ K D D++SDFLAQ Sbjct: 247 EHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQ 283
>AK072762:Os01g0248400 | Length = 414 Score = 33.5 bits (75), Expect = 0.33 Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Frame = +2 Query: 1157 QHWQIDFMVAYAVKIEG*YIDVQK*ND-DIESDFLAQ 1264 +H ID MVAYA+K EG Y+ K D D++SD +AQ Sbjct: 247 EHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDLIAQ 283
>AK107656: | Length = 1333 Score = 33.1 bits (74), Expect = 0.44 Identities = 24/84 (28%), Positives = 36/84 (42%) Frame = +3 Query: 201 VKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 380 VKRI G I E T + F+E ++ + ++RR + + R+ G GG Sbjct: 311 VKRIKGFIRELTAQSIVPFMERYVQHMGEHLANSRRGLTNRL---FGASRKLYGGVGVGG 367 Query: 381 NHRRHGVGESLLGGRRCDGGCSLQ 452 + + G G S GG GG Q Sbjct: 368 SSDKSGSGSSTPGGLATSGGYDAQ 391
>Os04g0688400:Os04g0688400 | Length = 318 Score = 30.8 bits (68), Expect = 2.2 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = -1 Query: 156 PGCCRAAPSGGAWRRPFRAPFLPCHGPTSPP 64 P CCRAA A+ P R P +P P+SPP Sbjct: 246 PSCCRAA----AFVPPCRRPSVPHRAPSSPP 272
>AK109628:Os04g0389800 | Length = 639 Score = 30.0 bits (66), Expect = 3.7 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = +2 Query: 125 PPEGAARQHPGHHQAGHPSPGAPRRREAHLGAHLRG 232 P + R HP HHQA P+P RR H H RG Sbjct: 177 PGDAHRRVHPLHHQAQLPNP----RRRRHPPRHQRG 208
>AF499028:Os01g0141100 | Length = 408 Score = 26.2 bits (56), Expect(2) = 4.8 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 Query: 452 VDGTKRKTGHRPVENGC*KSRKVETELLVQMQ 547 +D G R N SR+++TELLVQMQ Sbjct: 228 IDEIDSLCGQRGEGNESEASRRIKTELLVQMQ 259 Score = 21.9 bits (45), Expect(2) = 4.8 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = +3 Query: 579 YISPPDLKAR*CRFKV 626 YI PDLKAR FKV Sbjct: 293 YIPLPDLKARQHMFKV 308
>Os02g0159900:Os02g0159900 | Length = 433 Score = 29.6 bits (65), Expect = 4.8 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +3 Query: 450 QWMEQSEKLATDLLKMAAEN 509 +WM +SEKL T+L +MA EN Sbjct: 197 KWMGESEKLVTNLFQMAREN 216
>AK107462:Os10g0571300 | Length = 512 Score = 29.6 bits (65), Expect = 4.8 Identities = 16/47 (34%), Positives = 20/47 (42%) Frame = -1 Query: 153 GCCRAAPSGGAWRRPFRAPFLPCHGPTSPPLSLCCGGFDSWLVEG*G 13 GC + P+G P A LP P P + GG DS +G G Sbjct: 2 GCFLSKPAGAGPLPPNDAAALPADNPADPEAAAANGGADSAAADGGG 48
>AK067644:Os01g0141100 | Length = 316 Score = 26.2 bits (56), Expect(2) = 4.9 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 Query: 452 VDGTKRKTGHRPVENGC*KSRKVETELLVQMQ 547 +D G R N SR+++TELLVQMQ Sbjct: 111 IDEIDSLCGQRGEGNESEASRRIKTELLVQMQ 142 Score = 21.9 bits (45), Expect(2) = 4.9 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = +3 Query: 579 YISPPDLKAR*CRFKV 626 YI PDLKAR FKV Sbjct: 176 YIPLPDLKARQHMFKV 191
>AK062139:Os01g0141100 | Length = 303 Score = 26.2 bits (56), Expect(2) = 4.9 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 Query: 452 VDGTKRKTGHRPVENGC*KSRKVETELLVQMQ 547 +D G R N SR+++TELLVQMQ Sbjct: 98 IDEIDSLCGQRGEGNESEASRRIKTELLVQMQ 129 Score = 21.9 bits (45), Expect(2) = 4.9 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = +3 Query: 579 YISPPDLKAR*CRFKV 626 YI PDLKAR FKV Sbjct: 163 YIPLPDLKARQHMFKV 178
>AK119817: | Length = 931 Score = 29.3 bits (64), Expect = 6.3 Identities = 18/61 (29%), Positives = 23/61 (37%) Frame = +2 Query: 11 PPHPSTNHESNPPQQRDSGGDVGPWXXXXXXXXXXXXXPPEGAARQHPGHHQAGHPSPGA 190 PP P+ + P GG+ G W PP + H + GHP PGA Sbjct: 685 PPPPAASGSRMSPI---GGGNAG-WHPMYGPGPAHGHGPPPPQSLPHGHPYGGGHPPPGA 740 Query: 191 P 193 P Sbjct: 741 P 741
>AK101493:Os03g0843600 | Length = 893 Score = 28.9 bits (63), Expect = 8.2 Identities = 24/78 (30%), Positives = 28/78 (35%) Frame = +2 Query: 8 KPPHPSTNHESNPPQQRDSGGDVGPWXXXXXXXXXXXXXPPEGAARQHPGHHQAGHPSPG 187 + P PST+ SNP D P PPE +Q P P Sbjct: 34 RAPFPSTSRSSNPYSFPDRRPPPTP-----RSRSRSPLPPPEQQKQQQP----PPTTPPP 84 Query: 188 APRRREAHLGAHLRGDPR 241 APRRR+ RGD R Sbjct: 85 APRRRDPRYAGVRRGDVR 102
>AK073348:Os03g0285900 | Length = 330 Score = 28.9 bits (63), Expect = 8.2 Identities = 21/91 (23%), Positives = 28/91 (30%), Gaps = 11/91 (12%) Frame = +2 Query: 2 GTKPPHPSTNHESNPPQQRDSGGDVGPWXXXXXXXXXXXXXPPEGAARQHPGHHQAGHPS 181 G + P + S PP+ D PW P A + P G PS Sbjct: 230 GRRSPRSPQDRVSPPPKDNDERNGDSPWGRENSRSPSDGYRSPVAANGRSPSPRNNGSPS 289 Query: 182 P-----------GAPRRREAHLGAHLRGDPR 241 P G+P R+ + RG R Sbjct: 290 PMDNNSRSPRDNGSPSPRDGNGDGGSRGGSR 320
>AK068216:Os03g0843600 | Length = 893 Score = 28.9 bits (63), Expect = 8.2 Identities = 24/78 (30%), Positives = 28/78 (35%) Frame = +2 Query: 8 KPPHPSTNHESNPPQQRDSGGDVGPWXXXXXXXXXXXXXPPEGAARQHPGHHQAGHPSPG 187 + P PST+ SNP D P PPE +Q P P Sbjct: 34 RAPFPSTSRSSNPYSFPDRRPPPTP-----RSRSRSPLPPPEQQKQQQP----PPTTPPP 84 Query: 188 APRRREAHLGAHLRGDPR 241 APRRR+ RGD R Sbjct: 85 APRRRDPRYAGVRRGDVR 102 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 33,548,671 Number of extensions: 758552 Number of successful extensions: 2478 Number of sequences better than 10.0: 32 Number of HSP's gapped: 2464 Number of HSP's successfully gapped: 35 Length of query: 427 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 324 Effective length of database: 11,275,632 Effective search space: 3653304768 Effective search space used: 3653304768 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
