ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf39b12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK121824:Os02g0104200 | 257 | 2e-68 | 2 | AK060830:Os02g0104200 | 257 | 2e-68 | 3 | AK067326:Os06g0106900 | 144 | 2e-34 | 4 | AK108933:Os05g0112200 | 32 | 0.92 | 5 | AK110552: | 31 | 2.1 | 6 | AK106232:Os01g0765200 | 31 | 2.1 | 7 | AK106218:Os04g0423400 | 31 | 2.7 | 8 | AK069352:Os02g0522800 | 31 | 2.7 | 9 | AK061578:Os04g0423400 | 31 | 2.7 | 10 | Os04g0245000:Os04g0245000 | 25 | 3.2 | 11 | Os10g0481000:Os10g0481000 | 30 | 3.5 | 12 | Os04g0351300:Os04g0351300 | 30 | 4.6 | 13 | AK108454:Os02g0555300 | 30 | 4.6 | 14 | AK102859:Os08g0528700 | 30 | 4.6 | 15 | Os02g0164200:Os02g0164200 | 30 | 6.0 | 16 | Os05g0353500:Os05g0353500 | 29 | 7.8 | 17 | AK105814:Os07g0600200 | 29 | 7.8 | 18 | AK098959:Os09g0539100 | 29 | 7.8 | 19 | AK071977:Os09g0539100 | 29 | 7.8 | 20 | AK062681:Os07g0600200 | 29 | 7.8 | 21 | AK110287: | 29 | 7.8 | 22 | AK121495:Os12g0160900 | 29 | 7.8 | 23 | AK065838:Os12g0160900 | 29 | 7.8 |
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>AK121824:Os02g0104200 | Length = 223 Score = 257 bits (656), Expect = 2e-68 Identities = 149/228 (65%), Positives = 159/228 (69%), Gaps = 6/228 (2%) Frame = +1 Query: 571 MEKPAGNQXXXXXXXXXXXXXXDELDRQKQAEKKRRRLEKALANSAAIISXXXXXXXXXX 750 MEK A NQ DELDRQKQAEKKRRRLEKALANSAAIIS Sbjct: 1 MEKAAANQAGKVLKKGKKKQAKDELDRQKQAEKKRRRLEKALANSAAIISELEKKKQKKR 60 Query: 751 XXXXXXXXXGASIAEAVALHVLIGEDSDESRHLVLNKHRRCNDWDPSAGLDFTLDMQGAG 930 GA+IAEAVALHVLIGEDSDE HL+LNKHRRCN WD SAG DF +D QGA Sbjct: 61 EEQQRLDEEGAAIAEAVALHVLIGEDSDEPCHLMLNKHRRCNHWDHSAGFDFAVDAQGA- 119 Query: 931 DIYSPGGLM-CANQAYASRGRWIDWGNAHPLPTWGEVRD--LKASYYQGTFHQSTVACPG 1101 DIY P GL+ CA+ YA +GR IDWG PLP+WGEV+D L+A YQG FHQS VACPG Sbjct: 120 DIYPPDGLIQCADHVYAPKGRCIDWGIGQPLPSWGEVKDLQLQAPCYQGMFHQS-VACPG 178 Query: 1102 FMAAQAVSSLQIREDSS---SPGQGVAAATVVNRMLGGTNRLNLYREI 1236 F+AAQAVSSLQI DSS SP QG ATVVNRMLG TNRLNLYREI Sbjct: 179 FIAAQAVSSLQIGGDSSDITSPSQG---ATVVNRMLGATNRLNLYREI 223
>AK060830:Os02g0104200 | Length = 223 Score = 257 bits (656), Expect = 2e-68 Identities = 149/228 (65%), Positives = 159/228 (69%), Gaps = 6/228 (2%) Frame = +1 Query: 571 MEKPAGNQXXXXXXXXXXXXXXDELDRQKQAEKKRRRLEKALANSAAIISXXXXXXXXXX 750 MEK A NQ DELDRQKQAEKKRRRLEKALANSAAIIS Sbjct: 1 MEKAAANQAGKVLKKGKKKQAKDELDRQKQAEKKRRRLEKALANSAAIISELEKKKQKKR 60 Query: 751 XXXXXXXXXGASIAEAVALHVLIGEDSDESRHLVLNKHRRCNDWDPSAGLDFTLDMQGAG 930 GA+IAEAVALHVLIGEDSDE HL+LNKHRRCN WD SAG DF +D QGA Sbjct: 61 EEQQRLDEEGAAIAEAVALHVLIGEDSDEPCHLMLNKHRRCNHWDHSAGFDFAVDAQGA- 119 Query: 931 DIYSPGGLM-CANQAYASRGRWIDWGNAHPLPTWGEVRD--LKASYYQGTFHQSTVACPG 1101 DIY P GL+ CA+ YA +GR IDWG PLP+WGEV+D L+A YQG FHQS VACPG Sbjct: 120 DIYPPDGLIQCADHVYAPKGRCIDWGIGQPLPSWGEVKDLQLQAPCYQGMFHQS-VACPG 178 Query: 1102 FMAAQAVSSLQIREDSS---SPGQGVAAATVVNRMLGGTNRLNLYREI 1236 F+AAQAVSSLQI DSS SP QG ATVVNRMLG TNRLNLYREI Sbjct: 179 FIAAQAVSSLQIGGDSSDITSPSQG---ATVVNRMLGATNRLNLYREI 223
>AK067326:Os06g0106900 | Length = 215 Score = 144 bits (363), Expect = 2e-34 Identities = 92/206 (44%), Positives = 111/206 (53%), Gaps = 2/206 (0%) Frame = +1 Query: 571 MEKPAGNQXXXXXXXXXXXXXXDELDRQKQAEKKRRRLEKALANSAAIISXXXXXXXXXX 750 M+K GNQ DELDRQKQAEKKRRRLEKALANSAAIIS Sbjct: 1 MDKAGGNQGGKVLKKGKKKHAKDELDRQKQAEKKRRRLEKALANSAAIISELEKKRQQKR 60 Query: 751 XXXXXXXXXGASIAEAVALHVLIGEDSDESRHLVLNKHRRCNDWDPSAGLDFTLDMQGAG 930 GA+IAEAVALHVLI EDS+E HL+LN R CN W+ G F D QG Sbjct: 61 EEQQRLDDEGAAIAEAVALHVLIDEDSEEPCHLMLNNLRICNHWEDFVGFGFAPDSQGV- 119 Query: 931 DIYSPGGLMCANQAYASRGRWIDWGNAHPLPTWGEVRDLKASYYQGTFHQSTVACPGFMA 1110 D Y G + AY + RW +WG + +W ++ D +A YQ QS + PG +A Sbjct: 120 DAYPSGKPTSVSHAYVPQLRWTNWGMSQTFSSWEQLTDCEAPLYQEALAQSDIH-PGPIA 178 Query: 1111 AQAVSSLQIREDS--SSPGQGVAAAT 1182 VS LQ R + + G+ VAAA+ Sbjct: 179 --IVSPLQKRREDPFTIQGEAVAAAS 202
>AK108933:Os05g0112200 | Length = 290 Score = 32.3 bits (72), Expect = 0.92 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 6/89 (6%) Frame = +2 Query: 983 GGGGSTGATRIRCQPGEK*GTSKRPTTKERSTSQRSPARASWLPRPSHLCRSEKTHPLQA 1162 GGG A R + +P G++ TT ST PA ++ S C + L A Sbjct: 86 GGGYRRHAKRAKPKPASAAGSASAATTTAGST----PAGSTTTTTTSSTCATPNAPALPA 141 Query: 1163 ------KELPPLPSLIGCSAAPTGSTFTG 1231 LPPL L A GSTF+G Sbjct: 142 MLGGNLSILPPLLRLADFDAMSLGSTFSG 170
>AK110552: | Length = 242 Score = 31.2 bits (69), Expect = 2.1 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Frame = -1 Query: 948 AGGVDI---TRALHVQREIQTSRGVPVVASSVLVQHQMAGFIGVLTYENMKSDCFG 790 AGGV T AL+V+RE+ G+P A+ L+ H GV Y + K D FG Sbjct: 112 AGGVMTPGETYALNVEREVHEELGIP-KAALTLIDH------GVFRYRDAKIDTFG 160
>AK106232:Os01g0765200 | Length = 431 Score = 31.2 bits (69), Expect = 2.1 Identities = 15/25 (60%), Positives = 15/25 (60%) Frame = +1 Query: 82 SSSSPPAQRPDRSPVPTPTGAPRLP 156 SSSS PA RSPVP P G P P Sbjct: 27 SSSSAPAPASPRSPVPPPPGVPPPP 51
>AK106218:Os04g0423400 | Length = 240 Score = 30.8 bits (68), Expect = 2.7 Identities = 27/88 (30%), Positives = 38/88 (43%) Frame = +2 Query: 857 TSTEDATTGTPRLVWISRWTCKARVISTPPADLCAPIKLMLPGGGGSTGATRIRCQPGEK 1036 T+T TTG ++R T +T A AP P STG C+PG Sbjct: 88 TTTAATTTGQG----LTRSTAATSPATTSTAAAAAP----KPTRSTSTG-----CRPG-- 132 Query: 1037 *GTSKRPTTKERSTSQRSPARASWLPRP 1120 T++R T + R +++ A A W P P Sbjct: 133 --TTRRSTGRRRRSTRTRSASARWAPSP 158
>AK069352:Os02g0522800 | Length = 130 Score = 30.8 bits (68), Expect = 2.7 Identities = 19/79 (24%), Positives = 33/79 (41%) Frame = +2 Query: 932 ISTPPADLCAPIKLMLPGGGGSTGATRIRCQPGEK*GTSKRPTTKERSTSQRSPARASWL 1111 ++ PP A + PG GG T + ++ G + +R ++R R S Sbjct: 42 VAPPPPPSSADRRTPQPGDGGRTDGSSSAAAAADRKGKKPMSASDDRKQARRKEKRKSGY 101 Query: 1112 PRPSHLCRSEKTHPLQAKE 1168 P+ L S +++ AKE Sbjct: 102 PKEKLLESSMRSYQGPAKE 120
>AK061578:Os04g0423400 | Length = 302 Score = 30.8 bits (68), Expect = 2.7 Identities = 27/88 (30%), Positives = 38/88 (43%) Frame = +2 Query: 857 TSTEDATTGTPRLVWISRWTCKARVISTPPADLCAPIKLMLPGGGGSTGATRIRCQPGEK 1036 T+T TTG ++R T +T A AP P STG C+PG Sbjct: 88 TTTAATTTGQG----LTRSTAATSPATTSTAAAAAP----KPTRSTSTG-----CRPG-- 132 Query: 1037 *GTSKRPTTKERSTSQRSPARASWLPRP 1120 T++R T + R +++ A A W P P Sbjct: 133 --TTRRSTGRRRRSTRTRSASARWAPSP 158
>Os04g0245000:Os04g0245000 | Length = 1541 Score = 24.6 bits (52), Expect(2) = 3.2 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = -1 Query: 1047 EVPHFSPGWQRMRVAPVDPPPP 982 E PH+ PG +P PPPP Sbjct: 1047 ERPHYLPGEVGGAPSPPSPPPP 1068 Score = 24.3 bits (51), Expect(2) = 3.2 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = -1 Query: 1005 APVDPPPPGSISLIGAHKSAGGV 937 AP PPPPG I+ + GG+ Sbjct: 1108 APPPPPPPGGITGVPPPPPIGGL 1130
>Os10g0481000:Os10g0481000 | Length = 177 Score = 30.4 bits (67), Expect = 3.5 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 1/63 (1%) Frame = +2 Query: 983 GGGGSTGATRIRCQPGEK*GTSKRPTTKERSTSQRSPARASWL-PRPSHLCRSEKTHPLQ 1159 GGGG GA PGE+ ++ R + ER + W+ P LCR Sbjct: 89 GGGGGGGAVAAASLPGERGRSAARWPSDERGGDEECRGGLGWVPPHELLLCRERAAASFS 148 Query: 1160 AKE 1168 +E Sbjct: 149 VRE 151
>Os04g0351300:Os04g0351300 | Length = 1159 Score = 30.0 bits (66), Expect = 4.6 Identities = 30/104 (28%), Positives = 41/104 (39%), Gaps = 15/104 (14%) Frame = +2 Query: 908 RWTCKARVISTPPADLCAPIK----LMLPGGGGSTGATRIRCQP--GEK*GTSKRPTTKE 1069 RW R + D+C M G + R RC+P GE T +RP Sbjct: 100 RWRGLGRRTAAAQEDMCGEGDDLWGRMCRSGRRTRRRGRPRCRPLGGE---TRRRPPPLA 156 Query: 1070 RSTSQ---------RSPARASWLPRPSHLCRSEKTHPLQAKELP 1174 S ++ R P R+SW P P CRS ++ + A LP Sbjct: 157 TSAARALPPPPPPLRLPLRSSWAPSPV-ACRSRRSADIIAMSLP 199
>AK108454:Os02g0555300 | Length = 204 Score = 30.0 bits (66), Expect = 4.6 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 10/55 (18%) Frame = +2 Query: 362 RPEWV*HS---------AATASALAGQGVNRRALRKKA-SRQESNNYELCRFWFS 496 R W+ H A +S L NRR+ RK+ S ESNN+ LCR + S Sbjct: 114 RTNWIMHEYHLLDGDCVAGGSSNLTSSSSNRRSHRKRGHSSMESNNWVLCRVFES 168
>AK102859:Os08g0528700 | Length = 187 Score = 30.0 bits (66), Expect = 4.6 Identities = 34/132 (25%), Positives = 49/132 (37%), Gaps = 1/132 (0%) Frame = +2 Query: 830 PMNPAIWC*TSTEDATTGTPRLVWISRWTCKARVISTPPADLCAPIKLMLPGGGGSTGAT 1009 P +P+ W TS+ A + PR +++ T P P + Sbjct: 30 PRHPSPWRTTSSTPAASPPPR---------RSKPPRTSPTSSPPP--------------S 66 Query: 1010 RIRCQPGEK*GTSKRPTTKERSTSQRSPARASWLPR-PSHLCRSEKTHPLQAKELPPLPS 1186 R RC P G++ T RS+ P+ S PR P+ S + A P P+ Sbjct: 67 RTRCSPSSP-GSASPARTSPRSSP---PSHGSSAPRRPASPSASPPSATASACPTPRSPA 122 Query: 1187 LIGCSAAPTGST 1222 C AAP ST Sbjct: 123 SSSCPAAPRAST 134
>Os02g0164200:Os02g0164200 | Length = 140 Score = 29.6 bits (65), Expect = 6.0 Identities = 17/29 (58%), Positives = 19/29 (65%), Gaps = 4/29 (13%) Frame = +1 Query: 88 SSPPAQRPDRSPV---PTPTG-APRLPAS 162 SSPPA+RP SPV P P AP LPA+ Sbjct: 76 SSPPARRPSSSPVRALPLPAACAPPLPAA 104
>Os05g0353500:Os05g0353500 | Length = 525 Score = 29.3 bits (64), Expect = 7.8 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 10/99 (10%) Frame = +2 Query: 953 LCAPIKLMLP-GGGGSTGATRIRCQPGEK*GTSKRPTTKERSTSQRSPARASWLPRPSHL 1129 LC ++L + GGGG GA R R +K +S +++ S+++ ++A W P S Sbjct: 12 LCLQLQLGISGGGGGGHGARRARLIHAKK-SSSSSQQQQQQQRSRQAGSKAGW-PSTSST 69 Query: 1130 CRSEKTHPLQAKELPPL---------PSLIGCSAAPTGS 1219 + P+ PPL P + G S++P+ S Sbjct: 70 PSNPFGLPMLLPPPPPLKDWPPWLDMPPVQGPSSSPSPS 108
>AK105814:Os07g0600200 | Length = 113 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/51 (29%), Positives = 23/51 (45%) Frame = +2 Query: 1040 GTSKRPTTKERSTSQRSPARASWLPRPSHLCRSEKTHPLQAKELPPLPSLI 1192 G + R +E +S +PA P+H P+ ELPPLP ++ Sbjct: 22 GAAARRLEEEEPSSTTAPAEEEDQEEPNHPAAVFPELPVPEHELPPLPKVV 72
>AK098959:Os09g0539100 | Length = 443 Score = 29.3 bits (64), Expect = 7.8 Identities = 20/56 (35%), Positives = 26/56 (46%) Frame = +2 Query: 1043 TSKRPTTKERSTSQRSPARASWLPRPSHLCRSEKTHPLQAKELPPLPSLIGCSAAP 1210 +S+ R SPA A+ LP PS R+ PL+A L S + SAAP Sbjct: 16 SSRAAAVSARRAPSASPAAAASLPSPS---RASCAPPLRASAARTLRSRVVASAAP 68
>AK071977:Os09g0539100 | Length = 443 Score = 29.3 bits (64), Expect = 7.8 Identities = 20/56 (35%), Positives = 26/56 (46%) Frame = +2 Query: 1043 TSKRPTTKERSTSQRSPARASWLPRPSHLCRSEKTHPLQAKELPPLPSLIGCSAAP 1210 +S+ R SPA A+ LP PS R+ PL+A L S + SAAP Sbjct: 16 SSRAAAVSARRAPSASPAAAASLPSPS---RASCAPPLRASAARTLRSRVVASAAP 68
>AK062681:Os07g0600200 | Length = 113 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/51 (29%), Positives = 23/51 (45%) Frame = +2 Query: 1040 GTSKRPTTKERSTSQRSPARASWLPRPSHLCRSEKTHPLQAKELPPLPSLI 1192 G + R +E +S +PA P+H P+ ELPPLP ++ Sbjct: 22 GAAARRLEEEEPSSTTAPAEEEDQEEPNHPAAVFPELPVPEHELPPLPKVV 72
>AK110287: | Length = 856 Score = 29.3 bits (64), Expect = 7.8 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = +1 Query: 94 PPAQRPDRSPVPTPTGAP 147 PPA RP P P PT AP Sbjct: 305 PPAYRPPTEPAPAPTAAP 322
>AK121495:Os12g0160900 | Length = 817 Score = 29.3 bits (64), Expect = 7.8 Identities = 21/53 (39%), Positives = 30/53 (56%) Frame = +1 Query: 886 PSAGLDFTLDMQGAGDIYSPGGLMCANQAYASRGRWIDWGNAHPLPTWGEVRD 1044 PSAG+ T +QG +I+S CA Q Y++ +G AHP PT+G R+ Sbjct: 773 PSAGVS-TSQIQGHTNIHSVP--QCAPQEYSA------YGAAHPPPTFGGGRN 816
>AK065838:Os12g0160900 | Length = 817 Score = 29.3 bits (64), Expect = 7.8 Identities = 21/53 (39%), Positives = 30/53 (56%) Frame = +1 Query: 886 PSAGLDFTLDMQGAGDIYSPGGLMCANQAYASRGRWIDWGNAHPLPTWGEVRD 1044 PSAG+ T +QG +I+S CA Q Y++ +G AHP PT+G R+ Sbjct: 773 PSAGVS-TSQIQGHTNIHSVP--QCAPQEYSA------YGAAHPPPTFGGGRN 816 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 38,315,096 Number of extensions: 860378 Number of successful extensions: 4249 Number of sequences better than 10.0: 23 Number of HSP's gapped: 4217 Number of HSP's successfully gapped: 24 Length of query: 509 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 404 Effective length of database: 11,195,550 Effective search space: 4523002200 Effective search space used: 4523002200 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
