ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf45n17 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os02g55120:12002.t05088:unspliced-genomic translation initiation factor IF-3, chloroplast precursor, putative,| expressed Length = 3668 Score = 94.1 bits (199), Expect(2) = 1e-21 Identities = 41/70 (58%), Positives = 52/70 (74%) Frame = +2 / +2 Query: 17 RFQTDVGELATEGSKNFAERNIYLILVPNKLAIQKEQDGVSKKDDVEGETDQSDDELDGD 196 RF + ++ATE SKNF ERNIYL+LVPNK+AIQKEQD ++KKD ++DQSDD+ + Sbjct: 2825 RFVFAIFQMATEESKNFQERNIYLVLVPNKIAIQKEQDELNKKDTAIEDSDQSDDQPEES 3004 Query: 197 ETVIEQPEGS 226 E V QPE S Sbjct: 3005 EPVPAQPEES 3034 Score = 29.0 bits (57), Expect(2) = 1e-21 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = +3 / +3 Query: 282 QKKSQQMFDIAVKAKGAISDFRR 350 ++KSQQMFD +K+ G + FR+ Sbjct: 3045 RQKSQQMFD*TIKSWGCLLRFRK 3113 Score = 62.0 bits (129), Expect(3) = 1e-13 Identities = 26/46 (56%), Positives = 30/46 (65%) Frame = -2 / -1 Query: 185 IHRLIGPSLLPHHPFCSPHLVLSVWLVYWVQESNIYSSPQNSYFLL 48 + LIG LL +PFCS H L V L YW QE +IYS P+N YFLL Sbjct: 2993 VGHLIGHCLLSQYPFCSAHPALFV*LSYWEQEQDIYSFPENFYFLL 2856 Score = 30.9 bits (61), Expect(3) = 1e-13 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -2 / -1 Query: 320 LYSYIKHLLRLLLSRVPYFPPVLSRAH 240 LY IKHLLRLL + P VL++ H Sbjct: 3083 LYGSIKHLLRLLSQSPCFPPVVLAQVH 3003 Score = 29.0 bits (57), Expect(3) = 1e-13 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = -1 / -1 Query: 51 SVASSPTSVWNLLRSSI 1 ++ +SPTS WN LRSSI Sbjct: 2684 NLITSPTSFWNRLRSSI 2634 Score = 57.9 bits (120), Expect(3) = 5e-11 Identities = 27/60 (45%), Positives = 40/60 (66%) Frame = +3 / +3 Query: 45 RQKEVRILRRGIYI*FLYPIN*PYRKNKMG*AKRMMWKERRTNQTMNWTGTRP*SNNRRE 224 +QK+V+I R+GIYI FL+PI * Y+K++M * KR++ + TNQ N +NRR+ Sbjct: 2853 QQKKVKIFRKGIYILFLFPIR*LYKKSRMS*TKRILR*KTVTNQMTNQRRVNLCQHNRRK 3032 Score = 30.4 bits (60), Expect(3) = 5e-11 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = +2 / +1 Query: 2 IELLRRFQTDVGEL 43 IELLRRFQ DVGE+ Sbjct: 2635 IELLRRFQNDVGEV 2676 Score = 24.4 bits (47), Expect(3) = 5e-11 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = +2 / +1 Query: 446 LPGKSDRTRPCDIKKLPSEHFCSES*IISHC 538 LP +S RTR +KKL HF * C Sbjct: 3253 LPRRSHRTRINIVKKLKLCHFSIAE*YFRSC 3345 Score = 58.8 bits (122), Expect = 5e-08 Identities = 28/58 (48%), Positives = 34/58 (58%) Frame = -3 / -2 Query: 220 LRLFDHGLVPVQFIV*LVRLSFHIILFAHPILFFLYG*FIGYKNQIYIPLRKILTSFC 47 LRL H + ++*LV + + ILF IL FLY IG KN+IYIP KI T FC Sbjct: 3028 LRLCWHRFTLLWLVI*LVTVFYRSILFVQLILLFLYSYLIGNKNKIYIPFLKIFTFFC 2855 Score = 47.3 bits (97), Expect = 1e-04 Identities = 21/36 (58%), Positives = 27/36 (75%) Frame = +1 / +1 Query: 46 DRRK*EFCGEEYIFDSCTQ*TSHTERTRWGEQKG*C 153 +RRK*+F G+EYI SC+Q* S+T+R EQKG C Sbjct: 2854 NRRK*KFSGKEYISCSCSQ*DSYTKRAG*AEQKGYC 2961 Score = 39.1 bits (79), Expect = 0.043 Identities = 18/24 (75%), Positives = 20/24 (83%) Frame = -1 / -3 Query: 114 MASLLGTRIKYIFLSAKFLLPSVA 43 +A LLGTR +YIFLS KFLL SVA Sbjct: 2922 IAILLGTRTRYIFLS*KFLLSSVA 2851
>LOC_Os11g41900:12011.t03723:unspliced-genomic 1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1, putative,| expressed Length = 6207 Score = 35.9 bits (72), Expect = 0.40 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = -2 / -2 Query: 173 IGPSLLPHHPFCSPHLVLSVWLVYWVQESNIY 78 I S+LP HP PH W++Y++ ++N+Y Sbjct: 1985 ITASVLPRHPER*PHDKKKFWMIYYILQTNLY 1890
>LOC_Os03g20460:12003.t01804:unspliced-genomic guanylate kinase, putative, expressed| Length = 3604 Score = 35.0 bits (70), Expect = 0.75 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -3 / -2 Query: 802 NNRQHPLPRYFQPKVKNPKATI 737 +N HPLP + QP V NPK +I Sbjct: 660 DNEMHPLPLFLQPLVNNPKPSI 595
>LOC_Os10g41580:12010.t03392:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 2517 Score = 34.5 bits (69), Expect = 1.0 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 / +1 Query: 434 PPPSLPGKSDRTRPCDIKKLPSEHFC 511 PPPS P ++ R RP + LP H C Sbjct: 1462 PPPSRPCRTCRARPSSVVLLPCRHLC 1539
>LOC_Os12g26310:12012.t02345:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 8089 Score = 34.1 bits (68), Expect = 1.4 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +2 / -3 Query: 593 VMVIVRKVCLFCPLWHCCLQGFVLALSS 676 VMV+ R VCL ++H C Q F+L L S Sbjct: 1820 VMVL*RMVCLHASIFHQCAQPFILFLKS 1737
>LOC_Os06g50310:12006.t04715:unspliced-genomic DNA binding protein, putative, expressed| Length = 3774 Score = 34.1 bits (68), Expect = 1.4 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +3 / -3 Query: 432 IHHHRCLGSQTEQGHATSRSYHLNIFVRSLESSRIVPTEST 554 IH HR L +++ GH + H + R+ SS I+PT T Sbjct: 508 IHGHRQLAMESKPGHKVTTITHQKLLTRNPYSS*ILPTYDT 386
>LOC_Os01g22560:12001.t01989:unspliced-genomic glycerol-3-phosphate acyltransferase 1, putative, expressed| Length = 1053 Score = 33.6 bits (67), Expect = 1.9 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -2 / +1 Query: 149 HPFCSPHLVLSVWLVYWVQESNIY 78 + +C+P L L + L +W +ESN+Y Sbjct: 979 YSYCTPSLCLKIKLTFWDRESNLY 1050
>LOC_Os05g48820:12005.t04316:unspliced-genomic DDT domain containing protein, expressed| Length = 10708 Score = 32.2 bits (64), Expect(2) = 2.4 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +2 / +2 Query: 122 EQDGVSKKDDVEGETDQSDDELDGDETVIEQPE 220 E+D + D + E D +DD+ DGDE IE+ + Sbjct: 5894 EKDVDDAERDEDSECDDADDDPDGDEVNIEEKD 5992 Score = 24.4 bits (47), Expect(2) = 2.4 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +1 / +2 Query: 373 TRMVLLYLYSPSLPDKTNEL 432 TRM ++ PS+ +KTNEL Sbjct: 10397 TRMKTVHHILPSIANKTNEL 10456
>LOC_Os06g40220:12006.t03718:unspliced-genomic F-box domain containing protein| Length = 2568 Score = 33.1 bits (66), Expect = 2.7 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +2 / +2 Query: 377 GWCSCTCTRRPCLIKQMSYPPPSLP 451 GW SCT T PC + + PPP P Sbjct: 887 GWESCTATSSPCGTGRRTAPPPPPP 961
>LOC_Os06g04520:12006.t00342:unspliced-genomic expressed protein| Length = 10822 Score = 33.1 bits (66), Expect = 2.7 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +3 / -3 Query: 642 VVCKVLFWRCRLQISVNRCCGEDQ*SSYLV 731 + CK+ FWRCR SV+ C + S +++ Sbjct: 3293 MTCKICFWRCRTHSSVSICD*NHERSKHII 3204
>LOC_Os05g25990:12005.t02253:unspliced-genomic hypothetical protein| Length = 999 Score = 27.2 bits (53), Expect(2) = 3.2 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +2 / -3 Query: 404 RPCLIKQMSYPPPSLPG 454 RPCL + PPSLPG Sbjct: 913 RPCLSRPPPTSPPSLPG 863 Score = 25.8 bits (50), Expect(2) = 3.2 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +2 / -1 Query: 740 GCFRIFDLWLEVPRKRVL 793 GCFR+F L + VP ++ Sbjct: 66 GCFRVFSLHITVPNAHLV 13
>LOC_Os05g40110:12005.t03551:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5552 Score = 29.9 bits (59), Expect(2) = 3.3 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +2 / +3 Query: 437 PPSLPGKSDRTRPCDIKKLPSE 502 PP+ GKS T+ C IKKL S+ Sbjct: 1767 PPAYKGKSHGTQGCSIKKLVSK 1832 Score = 25.4 bits (49), Expect(2) = 3.3 Identities = 13/37 (35%), Positives = 15/37 (40%) Frame = +2 / +1 Query: 122 EQDGVSKKDDVEGETDQSDDELDGDETVIEQPEGSSL 232 + DG KDD E Q D LD + P G L Sbjct: 1609 DDDGGDDKDDKNDEELQEDMNLDDEFKNQNSPRGRQL 1719
>LOC_Os11g10420:12011.t00932:unspliced-genomic 1-phosphatidylinositol 4-kinase, putative, expressed| Length = 10381 Score = 32.7 bits (65), Expect = 3.7 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -2 / +1 Query: 290 LLLSRVPYFPPVLSRAHPHPNY 225 +LL R PYF + S AHP NY Sbjct: 8629 VLLKRTPYF*KIFSDAHPESNY 8694
>LOC_Os10g10990:12010.t00903:unspliced-genomic transcription initiation factor IIF, alpha subunit, putative,| expressed Length = 7860 Score = 32.7 bits (65), Expect = 3.7 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +2 / -3 Query: 374 QGWCSCTCTRRPCLIKQMSYPPPSLPGK 457 + WC+CT RR + PPS PG+ Sbjct: 286 RAWCACTTCRRGPTASRSPRTPPSAPGR 203
>LOC_Os02g02460:12002.t00145:unspliced-genomic transposon protein, putative, unclassified, expressed| Length = 3286 Score = 32.7 bits (65), Expect = 3.7 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +2 / -2 Query: 71 ERNIYLILVPNKLAIQKEQDGVSKKDDVEGETDQSDDELDGDETVI 208 ER + +L A+Q E G ++ D E E SDD DGDE ++ Sbjct: 1365 ERRLLRLLAGAAAALQVEVVGGAEHDGEEVEEPVSDDHGDGDEHLV 1228
>LOC_Os11g29014:12011.t02511:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4888 Score = 32.2 bits (64), Expect = 5.1 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +2 / +2 Query: 134 VSKKDDVEGETDQSDDELDGDETVIEQPEGSSLDGDE 244 V K + EGE + + +E E V+EQP G G E Sbjct: 3491 VPKGKEGEGEAEMAGEEFARSEIVLEQPRGEGGGGQE 3601
>LOC_Os03g19740:12003.t01738:unspliced-genomic hypothetical protein| Length = 475 Score = 32.2 bits (64), Expect = 5.1 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +3 / -3 Query: 432 IHHHRCLGSQTEQGHATSRSY 494 +HHHRCL +T G A SR++ Sbjct: 323 LHHHRCLHGETTVGVALSRAH 261
>LOC_Os12g40880:12012.t03766:unspliced-genomic ATP binding protein, putative, expressed| Length = 3972 Score = 32.2 bits (64), Expect = 5.1 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = -1 / -3 Query: 678 ADDSAKTKPCRQQCHSGQNKQTFL 607 ++D A T+PCRQ+C S Q+K + Sbjct: 2293 SNDGA*TEPCRQRCFSDQSKHNVM 2222
>LOC_Os02g28074:12002.t02500:unspliced-genomic XRN 5-3 exonuclease N-terminus family protein, expressed| Length = 16540 Score = 26.7 bits (52), Expect(2) = 5.6 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = -1 / +1 Query: 339 QRWRPWPLQLYQTF 298 QRWRPWP + T+ Sbjct: 16168 QRWRPWPRESAATW 16209 Score = 22.1 bits (42), Expect(2) = 5.6 Identities = 7/12 (58%), Positives = 8/12 (66%) Frame = -3 / +1 Query: 475 WPCSV*LPRQRW 440 W C+V RQRW Sbjct: 16141 WECAVDRRRQRW 16176
>LOC_Os11g19410:12011.t01710:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1724 Score = 31.8 bits (63), Expect = 6.9 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = -3 / +3 Query: 448 QRWWWIAHLFYQARTASTSTRAPSLYLHELYRCLLKSE 335 +RW W+ LFY T +R PS+Y ++ + E Sbjct: 126 RRWGWVGTLFYG*DGLETMSRLPSVYRDGMWHVVTHKE 239
>LOC_Os08g13770:12008.t01253:unspliced-genomic hypothetical protein| Length = 665 Score = 31.8 bits (63), Expect = 6.9 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = +2 / +1 Query: 380 WCSCTCTRRPCLIKQMSYPPPSLPG 454 W S RRPCL + YP SLPG Sbjct: 124 WHSYLLPRRPCLAGRNLYPMTSLPG 198
>LOC_Os08g12310:12008.t01111:unspliced-genomic hypothetical protein| Length = 1265 Score = 31.8 bits (63), Expect = 6.9 Identities = 12/40 (30%), Positives = 20/40 (50%) Frame = -3 / +3 Query: 454 PRQRWWWIAHLFYQARTASTSTRAPSLYLHELYRCLLKSE 335 P +RW W+ L Y T +R PS+Y ++ + + E Sbjct: 120 PGRRWGWVGTLVYG*DGLETMSRLPSVYRGGMWHVVTREE 239
>LOC_Os07g38610:12007.t03525:unspliced-genomic UDP-galactose translocator, putative, expressed| Length = 5053 Score = 31.8 bits (63), Expect = 6.9 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -3 / +1 Query: 289 FFCLGFLTFLQFYHGLIPIQTTSLRLFDHGLV 194 FFC F F H L+P+ TSL ++ H L+ Sbjct: 1969 FFCSQ*KVFDTFLHFLLPVSITSLHMWMHQLI 2064
>LOC_Os07g35460:12007.t03221:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3522 Score = 31.8 bits (63), Expect = 6.9 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = -3 / -1 Query: 454 PRQRWWWIAHLFYQARTASTSTRAPSLYLHELYRCLLKSEMA 329 P +RW W+ L Y T +R PS+Y ++ + + E A Sbjct: 2871 PGRRWGWVGTLVYG*DGLETLSRLPSVYRGGMWHVVTREEDA 2746
>LOC_Os06g20770:12006.t01894:unspliced-genomic jasmonate O-methyltransferase, putative, expressed| Length = 2671 Score = 31.8 bits (63), Expect = 6.9 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +3 / +3 Query: 261 RKVRNPRQKKSQQMFDIAVKAKGAISDFRRHLYSSC 368 +K+ R KS Q+ I +KA A R H+ S+C Sbjct: 1143 KKIHGERSLKSSQVASI*IKATSASGRLRHHMSSNC 1250
>LOC_Os05g27710:12005.t02422:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 1785 Score = 31.8 bits (63), Expect = 6.9 Identities = 12/40 (30%), Positives = 20/40 (50%) Frame = -3 / -2 Query: 454 PRQRWWWIAHLFYQARTASTSTRAPSLYLHELYRCLLKSE 335 P +RW W+ L Y T +R PS+Y ++ + + E Sbjct: 1472 PGRRWGWVGTLVYG*DGLETMSRLPSVYRGGMWHVVTREE 1353
>LOC_Os04g19270:12004.t01667:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6667 Score = 31.8 bits (63), Expect = 6.9 Identities = 12/38 (31%), Positives = 20/38 (52%) Frame = -3 / +3 Query: 448 QRWWWIAHLFYQARTASTSTRAPSLYLHELYRCLLKSE 335 +RW W+ LFY T +R PS+Y ++ + + E Sbjct: 72 RRWDWVGTLFYG*DGLETMSRLPSVYRGGMWHVVAREE 185
>LOC_Os08g32080:12008.t02953:unspliced-genomic homeodomain leucine zipper protein CPHB-5, putative, expressed| Length = 4331 Score = 31.8 bits (63), Expect = 7.0 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +1 / -2 Query: 676 CKSQSIGAVEKISSRRILFIKWLLSDF*PLAGST*EEGVVYY 801 CK QS G + + S +LF W L DF + ST +E +Y Sbjct: 2767 CKMQSEGELIQYPSSFLLFFCWCLVDFKEINASTMQEKC*WY 2642
>LOC_Os07g16450:12007.t01505:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3290 Score = 29.5 bits (58), Expect(2) = 9.2 Identities = 11/38 (28%), Positives = 20/38 (52%) Frame = -3 / +3 Query: 448 QRWWWIAHLFYQARTASTSTRAPSLYLHELYRCLLKSE 335 +RW W+ L Y T +R PS+Y ++R + + + Sbjct: 72 RRWDWVGTLVYG*DGLETMSRLPSVYRGGMWRVVARED 185 Score = 23.5 bits (45), Expect(2) = 9.2 Identities = 7/13 (53%), Positives = 11/13 (84%) Frame = -2 / +1 Query: 173 IGPSLLPHHPFCS 135 IGP++L +HP C+ Sbjct: 1708 IGPTILNNHPGCT 1746
>LOC_Os12g14090:12012.t01275:unspliced-genomic hypothetical protein| Length = 1324 Score = 31.3 bits (62), Expect = 9.5 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = +2 / -1 Query: 380 WCSCTCTRRPCLIKQMSYPPPSLPGKSDRTRPCDIKKLPSEH 505 +CSCTC R+ L PP P + P ++ + P+ H Sbjct: 193 FCSCTC*RQKPLRHAYQRSPPY*PLHCTSSAPQELSRAPARH 68
>LOC_Os11g47820:12011.t04275:unspliced-genomic glucan endo-1,3-beta-glucosidase precursor, putative, expressed| Length = 4135 Score = 31.3 bits (62), Expect = 9.5 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 / -2 Query: 374 QGWCSCTCTRRPCLI 418 +GWC CTCT C + Sbjct: 3660 RGWCRCTCTAMACCV 3616
>LOC_Os10g05680:12010.t00443:unspliced-genomic expressed protein| Length = 2186 Score = 31.3 bits (62), Expect = 9.5 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +2 / -1 Query: 395 CTRRPCLIKQMSYPPPSLP 451 CT P I +SYPPPSLP Sbjct: 887 CTYLPESIPALSYPPPSLP 831
>LOC_Os07g27000:12007.t02395:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4891 Score = 31.3 bits (62), Expect = 9.5 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +2 / -2 Query: 149 DVEGETDQSDDELDGDETVIEQPEGSSLDG 238 DVEG+ +Q D DGD+ +E EG +G Sbjct: 567 DVEGDGNQGLDVEDGDDLRVESREGVGTEG 478
>LOC_Os07g17590:12007.t01618:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2486 Score = 31.3 bits (62), Expect = 9.5 Identities = 11/38 (28%), Positives = 20/38 (52%) Frame = -3 / +3 Query: 448 QRWWWIAHLFYQARTASTSTRAPSLYLHELYRCLLKSE 335 +RW W+ L Y T +R PS+Y +++ + + E Sbjct: 72 RRWGWVGTLVYG*DGLGTMSRLPSVYRGDMWHVVTREE 185
>LOC_Os05g30640:12005.t02663:unspliced-genomic expressed protein| Length = 1836 Score = 31.3 bits (62), Expect = 9.5 Identities = 10/25 (40%), Positives = 17/25 (68%) Frame = +2 / -2 Query: 575 VSESVTVMVIVRKVCLFCPLWHCCL 649 + +S+ ++ I R CL CP+ HCC+ Sbjct: 1646 LEQSLFILQIAR*PCLPCPVDHCCI 1572
>LOC_Os04g42340:12004.t03786:unspliced-genomic expressed protein| Length = 2308 Score = 31.3 bits (62), Expect = 9.5 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +2 / -1 Query: 386 SCTCTRRPCLIKQMSYPPPSLPGKSDRTRP 475 SC+ +RRP ++ P P PG + RT P Sbjct: 280 SCSASRRPARRRRARRPRPGSPGTTARTPP 191
>LOC_Os04g39130:12004.t03483:unspliced-genomic conserved hypothetical protein| Length = 2750 Score = 31.3 bits (62), Expect = 9.5 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +2 / -1 Query: 563 WDRAVSESVTVMVIVRKVCLFCPLWHCCLQGFVLAL 670 W +++ S ++ + K+C C +HC LQ +LAL Sbjct: 2453 WFSSIARSSSIPQTIFKMC*CCCSYHCQLQSALLAL 2346
>LOC_Os04g01480:12004.t00046:unspliced-genomic nucleic acid binding protein, putative, expressed| Length = 7986 Score = 31.3 bits (62), Expect = 9.5 Identities = 15/48 (31%), Positives = 21/48 (43%) Frame = +3 / +1 Query: 558 RLGIVQ*VSQ*QSW*LLGKFACFARCGIVVCKVLFWRCRLQISVNRCC 701 R + * S +W* KF CFA CG + C + ++ CC Sbjct: 898 RASQIH*TSNFSNW*DYNKFICFATCGCGYDDIKMKVCHGILVIS*CC 1041
>LOC_Os03g03870:12003.t00268:unspliced-genomic DNA binding protein, putative, expressed| Length = 6059 Score = 31.3 bits (62), Expect = 9.5 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -3 / +2 Query: 376 LYLHELYRCLLKSEMAPLAFTAISNIC*DFFC 281 L++H YRCLL S + F + IC* FC Sbjct: 1001 LFIH*HYRCLLLSTVLYFTFFLLLYIC*G*FC 1096
>LOC_Os02g49510:12002.t04535:unspliced-genomic amino acid transporter-like protein, putative, expressed| Length = 4075 Score = 31.3 bits (62), Expect = 9.5 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -3 / -3 Query: 475 WPCSV*LPRQRWWWIAHLFYQARTASTSTRA 383 WP + * R+RWWW + RT S RA Sbjct: 440 WPGAP*CRRRRWWWTG*TPRRRRTRRRSGRA 348
>LOC_Os05g03480:12005.t00245:unspliced-genomic isovaleryl-CoA dehydrogenase, mitochondrial precursor, putative,| expressed Length = 10908 Score = 31.3 bits (62), Expect = 9.6 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +1 / +3 Query: 502 TFLFGVLNHLALYQRNPLNGLGSCS 576 +FLF L+HL L R P +GL +CS Sbjct: 10347 SFLFFNLSHLFLPHRAPFDGLSNCS 10421
>LOC_Os05g03460:12005.t00243:unspliced-genomic protein kinase APK1B, chloroplast precursor, putative, expressed| Length = 2419 Score = 31.3 bits (62), Expect = 9.6 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +1 / -1 Query: 502 TFLFGVLNHLALYQRNPLNGLGSCS 576 +FLF L+HL L R P +GL +CS Sbjct: 2377 SFLFFNLSHLFLPHRAPFDGLSNCS 2303 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 336,176,100 Number of extensions: 5349719 Number of successful extensions: 26149 Number of sequences better than 10.0: 42 Length of query: 290 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 241 Effective length of database: 52,856,264 Effective search space: 12738359624 Effective search space used: 12738359624 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
