ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf45n17 |
|---|---|
| Clone Library Name | barley_pub |
>Q9W4D2:RNP4F_DROME RNA-binding protein 4F - Drosophila melanogaster (Fruit fly)| Length = 941 Score = 37.4 bits (85), Expect = 0.079 Identities = 16/48 (33%), Positives = 29/48 (60%) Frame = +2 Query: 107 LAIQKEQDGVSKKDDVEGETDQSDDELDGDETVIEQPEGSSLDGDEPV 250 +AI++E +G +K DV+ +Q +E G+E E+P+G GD+ + Sbjct: 857 VAIKREANGEEQKGDVQERDEQKGEEQKGEEQKGEEPKGEEQKGDDQI 904
>Q92688:AN32B_HUMAN Acidic leucine-rich nuclear phosphoprotein 32 family member B -| Homo sapiens (Human) Length = 251 Score = 32.3 bits (72), Expect = 2.5 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 3/44 (6%) Frame = +2 Query: 122 EQDGVSKKD-DVEGETDQSDDELDGDETVI--EQPEGSSLDGDE 244 E DGV +++ D EGE ++ +D+ DG+E E E ++GDE Sbjct: 161 EVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDE 204
>Q5UPA5:YL032_MIMIV Putative KilA-N domain-containing protein L32 - Mimivirus| Length = 372 Score = 32.0 bits (71), Expect = 3.3 Identities = 19/66 (28%), Positives = 33/66 (50%) Frame = +2 Query: 47 TEGSKNFAERNIYLILVPNKLAIQKEQDGVSKKDDVEGETDQSDDELDGDETVIEQPEGS 226 T SKN + N Y + + +D S +DD + + +QSD ELD E+ ++ + + Sbjct: 64 TTKSKNTNKSNKY-----TEEDSEDSEDSESDQDDDKSDNEQSDSELDDSESDDDETDDN 118 Query: 227 SLDGDE 244 D D+ Sbjct: 119 ESDNDK 124
>Q759Q5:SGO1_ASHGO Shugoshin - Ashbya gossypii (Yeast) (Eremothecium gossypii)| Length = 648 Score = 32.0 bits (71), Expect = 3.3 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +2 Query: 77 NIYLILVPNKLAIQKEQDGVSKKDDVEGETDQSDD 181 +I+ + VP ++K+++GV+ DV GETD D Sbjct: 475 DIHELQVPTNRKLRKQREGVADSADVHGETDHEQD 509
>Q7YR35:GNL1_PANTR Guanine nucleotide-binding protein-like 1 - Pan troglodytes| (Chimpanzee) Length = 430 Score = 32.0 bits (71), Expect = 3.3 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Frame = +2 Query: 116 QKEQDGVSKKDDVEGETDQ-SDDELDGDETVIEQPEGSSLDGDEP 247 ++E++ +S + EGE D+ +D+E +GDE GSSL G P Sbjct: 377 EEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSSLAGRNP 421
>P36915:GNL1_HUMAN Guanine nucleotide-binding protein-like 1 - Homo sapiens (Human)| Length = 430 Score = 32.0 bits (71), Expect = 3.3 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Frame = +2 Query: 116 QKEQDGVSKKDDVEGETDQ-SDDELDGDETVIEQPEGSSLDGDEP 247 ++E++ +S + EGE D+ +D+E +GDE GSSL G P Sbjct: 377 EEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSSLAGRNP 421
>P15498:VAV_HUMAN Proto-oncogene vav - Homo sapiens (Human)| Length = 845 Score = 31.6 bits (70), Expect = 4.3 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = +2 Query: 122 EQDGVSKKDDVEGETDQSDDELDGDETVIEQPEGSSLDGDE 244 E++ V +D G +DQ DD ++ DE + + E +GDE Sbjct: 132 EEESVGDEDIYSGLSDQIDDTVEEDEDLYDCVENEEAEGDE 172
>P25980:UBF1B_XENLA Nucleolar transcription factor 1-B - Xenopus laevis (African clawed| frog) Length = 701 Score = 31.6 bits (70), Expect = 4.3 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Frame = +2 Query: 17 RFQTDVGELATEGSKNFAERNIYLILVPNKLAIQKEQDGV---SKKDDVEGETDQSDDEL 187 +F T + L+T+ + E+N K+ + + SK DD E + D D+E Sbjct: 569 QFDTWMKGLSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDEDEE- 627 Query: 188 DGDETVIEQPEGSSLDGD 241 D D+ E E SS DGD Sbjct: 628 DDDDDDDEDKEDSSEDGD 645
>P24827:IE68_PRVKA Immediate-early protein RSP40 - Pseudorabies virus (strain Kaplan)| (PRV) Length = 364 Score = 31.2 bits (69), Expect = 5.6 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 4/46 (8%) Frame = +2 Query: 119 KEQDGVSKKDDVEGETDQSDDELDGDE----TVIEQPEGSSLDGDE 244 +E+DG + +D EGE ++ ++E +GDE V E+ + + + DE Sbjct: 216 EEEDGEEEDEDEEGEEEEDEEEEEGDEDGETDVYEEDDEAEDEEDE 261
>Q9EST6:AN32B_RAT Acidic leucine-rich nuclear phosphoprotein 32 family member B -| Rattus norvegicus (Rat) Length = 272 Score = 31.2 bits (69), Expect = 5.6 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = +2 Query: 122 EQDGVSKKD-DVEGETDQSDDELDGDETVIEQPEGSSLDGD 241 E DGV K++ D EGE ++ +++ DG+E E E D D Sbjct: 174 EVDGVDKEEEDEEGEDEEEEEDEDGEEEEDEDEEDEDEDED 214
>Q9EST5:AN32B_MOUSE Acidic leucine-rich nuclear phosphoprotein 32 family member B - Mus| musculus (Mouse) Length = 272 Score = 31.2 bits (69), Expect = 5.6 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = +2 Query: 122 EQDGVSKKD-DVEGETDQSDDELDGDETVIEQPEGSSLDGD 241 E DGV K++ D EGE ++ +++ DG+E E E D D Sbjct: 174 EVDGVDKEEEDEEGEDEEEEEDEDGEEEEDEDEEDEDEDED 214
>Q5U274:PTMAA_XENLA Prothymosin alpha-A - Xenopus laevis (African clawed frog)| Length = 111 Score = 30.8 bits (68), Expect = 7.4 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = +2 Query: 95 VPNKLAIQKEQDGVSKKDDVEGETDQSDDELDG 193 V N+ + E D ++D+VEGE D DDE++G Sbjct: 50 VDNEGDEEDEVDEEDEEDEVEGEDDDDDDEVEG 82
>Q6A1I3:AN32B_SHEEP Acidic leucine-rich nuclear phosphoprotein 32 family member B -| Ovis aries (Sheep) Length = 261 Score = 30.8 bits (68), Expect = 7.4 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +2 Query: 122 EQDGVSKK-DDVEGETDQSDDELDGDETVIEQPEGSSLDGD 241 E DGV ++ DD EGE + +++ DG+E + E D D Sbjct: 161 EVDGVDEEEDDEEGENEDKEEDEDGEEEEFDDEEDDDEDED 201
>Q39030:KPK19_ARATH Serine/threonine-protein kinase AtPK19 - Arabidopsis thaliana| (Mouse-ear cress) Length = 471 Score = 30.4 bits (67), Expect = 9.6 Identities = 13/46 (28%), Positives = 25/46 (54%) Frame = +2 Query: 101 NKLAIQKEQDGVSKKDDVEGETDQSDDELDGDETVIEQPEGSSLDG 238 NKL +++ +D V + VEGE+ + +DE G++ + + G Sbjct: 88 NKLTLRETEDSVDLVECVEGESIKENDEFSGNDDTDSEKSPEEVSG 133
>Q3SZC6:AN32B_BOVIN Acidic leucine-rich nuclear phosphoprotein 32 family member B - Bos| taurus (Bovine) Length = 261 Score = 30.4 bits (67), Expect = 9.6 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +2 Query: 122 EQDGVSKK-DDVEGETDQSDDELDGDETVIEQPEGSSLDGD 241 E DGV ++ DD EGE + +++ DG+E + E D D Sbjct: 161 EVDGVDEEEDDEEGEDEDKEEDEDGEEEEFDDEEDDDEDED 201 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 141,467,537 Number of extensions: 2957648 Number of successful extensions: 8735 Number of sequences better than 10.0: 15 Number of HSP's gapped: 8603 Number of HSP's successfully gapped: 15 Length of query: 290 Length of database: 100,686,439 Length adjustment: 112 Effective length of query: 178 Effective length of database: 69,965,399 Effective search space: 12453841022 Effective search space used: 12453841022 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
