Clone Information

BLAST Search Result

Clone Name	FLbaf42l12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|NM_001074625.1\| Oryza sativa (japonica cultivar-group) Os11g...	547	e-152
2	dbj\|AK107593.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	547	e-152
3	dbj\|AK071694.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	547	e-152
4	emb\|CT832265.1\| Oryza sativa (indica cultivar-group) cDNA clone:...	539	e-150
5	gb\|AC137753.4\| Oryza sativa (japonica cultivar-group) chromosome...	186	1e-43
6	gb\|AC136956.4\| Oryza sativa (japonica cultivar-group) chromosome...	186	1e-43
7	dbj\|AP008217.1\| Oryza sativa (japonica cultivar-group) genomic D...	186	1e-43
8	ref\|NM_119601.3\| Arabidopsis thaliana S-adenosylmethionine-depen...	62	4e-06
9	gb\|BT015517.1\| Arabidopsis thaliana At4g34360 mRNA sequence	62	4e-06
10	emb\|AL161585.2\|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, ...	62	4e-06
11	emb\|AL035521.1\|ATF10M10 Arabidopsis thaliana DNA chromosome 4, B...	62	4e-06
12	emb\|BX829043.1\|CNS0A2J6 Arabidopsis thaliana Full-length cDNA Co...	62	4e-06
13	gb\|AC189325.1\| Brassica rapa subsp. pekinensis clone KBrB036M17,...	54	0.001
14	gb\|BT015019.1\| Arabidopsis thaliana At4g34360 mRNA, complete cds	54	0.001
15	gb\|BT014787.1\| Arabidopsis thaliana At4g34360 gene, complete cds	54	0.001
16	emb\|CT833437.1\| Oryza sativa (indica cultivar-group) cDNA clone:...	44	1.00
17	ref\|NM_001055530.1\| Oryza sativa (japonica cultivar-group) Os03g...	44	1.00
18	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	44	1.00
19	gb\|AC134233.3\| Oryza sativa (japonica cultivar-group) chromosome...	44	1.00
20	gb\|AC137635.2\| Genomic sequence for Oryza sativa, Nipponbare str...	44	1.00
21	dbj\|AK100518.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	44	1.00
22	dbj\|AK066205.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	44	1.00
23	dbj\|AK062056.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	44	1.00
24	emb\|CT831437.1\| Oryza sativa (indica cultivar-group) cDNA clone:...	42	3.9
25	ref\|NM_001060690.1\| Oryza sativa (japonica cultivar-group) Os04g...	42	3.9
26	ref\|NM_001054617.1\| Oryza sativa (japonica cultivar-group) Os02g...	42	3.9
27	gb\|BT018120.1\| Zea mays clone EL01N0554A12.c mRNA sequence	42	3.9
28	gb\|AC073871.7\| Homo sapiens BAC clone RP11-260H17 from 7, comple...	42	3.9
29	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	3.9
30	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	3.9
31	gb\|AC022929.6\| Homo sapiens, clone RP11-326N17, complete sequence	42	3.9
32	gb\|AC009724.9\| Homo sapiens, clone RP11-45N10, complete sequence	42	3.9
33	emb\|AL606999.3\|OSJN00127 Oryza sativa genomic DNA, chromosome 4,...	42	3.9
34	gb\|AC082645.13\|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033...	42	3.9
35	dbj\|AP004815.3\| Oryza sativa (japonica cultivar-group) genomic D...	42	3.9
36	dbj\|AP004800.3\| Oryza sativa (japonica cultivar-group) genomic D...	42	3.9
37	dbj\|AK107934.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	42	3.9
38	dbj\|AK068867.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	42	3.9
39	gb\|AC006017.2\|AC006017 Homo sapiens PAC clone RP5-981O7 from 7q3...	42	3.9

>ref|NM_001074625.1| Oryza sativa (japonica cultivar-group) Os11g0557700 (Os11g0557700)
           mRNA, complete cds
          Length = 1617
 Score =  547 bits (276), Expect = e-152
 Identities = 510/588 (86%)
 Strand = Plus / Plus

                                                                       
Query: 220 ggttctggaggtcggctgcggcaattcgcggctcggggaggagctcttaagggagggcgt 279
           |||||| ||||| || || ||||| ||||||||||||||||||||  |  ||||||||||
Sbjct: 180 ggttcttgaggttgggtgtggcaactcgcggctcggggaggagctgctgcgggagggcgt 239

                                                                       
Query: 280 cgccggcggcgtcacctgcatcgacctctcgcccgtcgccgtccagaggatgcgcgacag 339
           |||||||||| |||||||| | |||||||||||||||||||||||| ||||||| ||| |
Sbjct: 240 cgccggcggcatcacctgcgttgacctctcgcccgtcgccgtccagcggatgcgtgaccg 299

                                                                       
Query: 340 actggcggagcagggcaccactggtgtggatgtggtggtggctgacatgcttgaccttcc 399
            || |||||||||||||||   |||||||| || |||||||| ||||||||||| || ||
Sbjct: 300 cctcgcggagcagggcaccgagggtgtggaggttgtggtggcggacatgcttgatctgcc 359

                                                                       
Query: 400 gttcgagagcgagagcttcgaccttgtgatcgagaaagggaccatggatgtgttgtttgt 459
           ||||||  | ||||||||||| || ||||| |||||||| |||||||| || || |||||
Sbjct: 360 gttcgatcgtgagagcttcgatctcgtgattgagaaaggcaccatggacgtattatttgt 419

                                                                       
Query: 460 ggacagtggtgatccatggaaccccaatcctacaacagtggataatgtaaccaaaatgct 519
           ||||||||||||||| |||||||| ||||||||||||||||||||||| |  ||||||||
Sbjct: 420 ggacagtggtgatccttggaacccaaatcctacaacagtggataatgtgatgaaaatgct 479

                                                                       
Query: 520 tgaaggtatccacaaggttttgaagccagatggcaaatttgtatcaattacctttggaca 579
           ||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||
Sbjct: 480 tgaaggtatccacaaggttttgaagcctgaaggcatatttgtatcaattacctttggaca 539

                                                                       
Query: 580 gccacacttccgtcgtcgatttttcgaagcacctgagcttacatggtctgttgagtggaa 639
           |||||| ||||||||||||||||| |||||||||| | ||||||||||||||||||||| 
Sbjct: 540 gccacatttccgtcgtcgattttttgaagcacctgggtttacatggtctgttgagtggag 599

                                                                       
Query: 640 cacctttggcgatggcttccattatttcttctacatccttcagaagggcaaaagatcacc 699
           ||||||||| ||||||||||||||||||||||| || ||| | |||||||| || |    
Sbjct: 600 cacctttggtgatggcttccattatttcttctatattcttaaaaagggcaagaggttgtt 659

                                                                       
Query: 700 agagtccaccggtcaccaagttacattgcctgctgctccaagcttcaatatgctccatga 759
            || |||| |||| |||||  ||||  |||||||||||||||| | |||||| |||||||
Sbjct: 660 ggattccaacggtaaccaacatacacagcctgctgctccaagcattaatatgttccatga 719

                                                           
Query: 760 tgagctcgaaagcgaggattacttatttcgcacaaatgttgatgagtt 807
            ||||| || || ||||| ||| |||| || |||||||||||||||||
Sbjct: 720 agagcttgagagtgaggactacatattccgaacaaatgttgatgagtt 767



 Score =  188 bits (95), Expect = 3e-44
 Identities = 119/127 (93%)
 Strand = Plus / Plus

                                                                       
Query: 60  cggcggcgatggcggacgacgtcgccccgtgcaccgcatccggctacctcgacccctcct 119
           ||||||||||||| ||||||||||| ||| ||||||| |||| |||||||||||||||||
Sbjct: 20  cggcggcgatggccgacgacgtcgcgccgcgcaccgcctccgcctacctcgacccctcct 79

                                                                       
Query: 120 actgggacgggcggttcgggaaggaggagcactacgagtggttcaaggacttctcccact 179
           ||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 80  actgggacgagcggttcgggaaggaggagcactatgagtggttcaaggatttctcccact 139

                  
Query: 180 tccgcca 186
           |||||||
Sbjct: 140 tccgcca 146

to top

>dbj|AK107593.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-A08, full
           insert sequence
          Length = 1617

 Score =  547 bits (276), Expect = e-152
 Identities = 510/588 (86%)
 Strand = Plus / Plus

                                                                       
Query: 220 ggttctggaggtcggctgcggcaattcgcggctcggggaggagctcttaagggagggcgt 279
           |||||| ||||| || || ||||| ||||||||||||||||||||  |  ||||||||||
Sbjct: 180 ggttcttgaggttgggtgtggcaactcgcggctcggggaggagctgctgcgggagggcgt 239

                                                                       
Query: 280 cgccggcggcgtcacctgcatcgacctctcgcccgtcgccgtccagaggatgcgcgacag 339
           |||||||||| |||||||| | |||||||||||||||||||||||| ||||||| ||| |
Sbjct: 240 cgccggcggcatcacctgcgttgacctctcgcccgtcgccgtccagcggatgcgtgaccg 299

                                                                       
Query: 340 actggcggagcagggcaccactggtgtggatgtggtggtggctgacatgcttgaccttcc 399
            || |||||||||||||||   |||||||| || |||||||| ||||||||||| || ||
Sbjct: 300 cctcgcggagcagggcaccgagggtgtggaggttgtggtggcggacatgcttgatctgcc 359

                                                                       
Query: 400 gttcgagagcgagagcttcgaccttgtgatcgagaaagggaccatggatgtgttgtttgt 459
           ||||||  | ||||||||||| || ||||| |||||||| |||||||| || || |||||
Sbjct: 360 gttcgatcgtgagagcttcgatctcgtgattgagaaaggcaccatggacgtattatttgt 419

                                                                       
Query: 460 ggacagtggtgatccatggaaccccaatcctacaacagtggataatgtaaccaaaatgct 519
           ||||||||||||||| |||||||| ||||||||||||||||||||||| |  ||||||||
Sbjct: 420 ggacagtggtgatccttggaacccaaatcctacaacagtggataatgtgatgaaaatgct 479

                                                                       
Query: 520 tgaaggtatccacaaggttttgaagccagatggcaaatttgtatcaattacctttggaca 579
           ||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||
Sbjct: 480 tgaaggtatccacaaggttttgaagcctgaaggcatatttgtatcaattacctttggaca 539

                                                                       
Query: 580 gccacacttccgtcgtcgatttttcgaagcacctgagcttacatggtctgttgagtggaa 639
           |||||| ||||||||||||||||| |||||||||| | ||||||||||||||||||||| 
Sbjct: 540 gccacatttccgtcgtcgattttttgaagcacctgggtttacatggtctgttgagtggag 599

                                                                       
Query: 640 cacctttggcgatggcttccattatttcttctacatccttcagaagggcaaaagatcacc 699
           ||||||||| ||||||||||||||||||||||| || ||| | |||||||| || |    
Sbjct: 600 cacctttggtgatggcttccattatttcttctatattcttaaaaagggcaagaggttgtt 659

                                                                       
Query: 700 agagtccaccggtcaccaagttacattgcctgctgctccaagcttcaatatgctccatga 759
            || |||| |||| |||||  ||||  |||||||||||||||| | |||||| |||||||
Sbjct: 660 ggattccaacggtaaccaacatacacagcctgctgctccaagcattaatatgttccatga 719

                                                           
Query: 760 tgagctcgaaagcgaggattacttatttcgcacaaatgttgatgagtt 807
            ||||| || || ||||| ||| |||| || |||||||||||||||||
Sbjct: 720 agagcttgagagtgaggactacatattccgaacaaatgttgatgagtt 767



 Score =  188 bits (95), Expect = 3e-44
 Identities = 119/127 (93%)
 Strand = Plus / Plus

                                                                       
Query: 60  cggcggcgatggcggacgacgtcgccccgtgcaccgcatccggctacctcgacccctcct 119
           ||||||||||||| ||||||||||| ||| ||||||| |||| |||||||||||||||||
Sbjct: 20  cggcggcgatggccgacgacgtcgcgccgcgcaccgcctccgcctacctcgacccctcct 79

                                                                       
Query: 120 actgggacgggcggttcgggaaggaggagcactacgagtggttcaaggacttctcccact 179
           ||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 80  actgggacgagcggttcgggaaggaggagcactatgagtggttcaaggatttctcccact 139

                  
Query: 180 tccgcca 186
           |||||||
Sbjct: 140 tccgcca 146

to top

>dbj|AK071694.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108E23, full
           insert sequence
          Length = 1140

 Score =  547 bits (276), Expect = e-152
 Identities = 510/588 (86%)
 Strand = Plus / Plus

                                                                       
Query: 220 ggttctggaggtcggctgcggcaattcgcggctcggggaggagctcttaagggagggcgt 279
           |||||| ||||| || || ||||| ||||||||||||||||||||  |  ||||||||||
Sbjct: 233 ggttcttgaggttgggtgtggcaactcgcggctcggggaggagctgctgcgggagggcgt 292

                                                                       
Query: 280 cgccggcggcgtcacctgcatcgacctctcgcccgtcgccgtccagaggatgcgcgacag 339
           |||||||||| |||||||| | |||||||||||||||||||||||| ||||||| ||| |
Sbjct: 293 cgccggcggcatcacctgcgttgacctctcgcccgtcgccgtccagcggatgcgtgaccg 352

                                                                       
Query: 340 actggcggagcagggcaccactggtgtggatgtggtggtggctgacatgcttgaccttcc 399
            || |||||||||||||||   |||||||| || |||||||| ||||||||||| || ||
Sbjct: 353 cctcgcggagcagggcaccgagggtgtggaggttgtggtggcggacatgcttgatctgcc 412

                                                                       
Query: 400 gttcgagagcgagagcttcgaccttgtgatcgagaaagggaccatggatgtgttgtttgt 459
           ||||||  | ||||||||||| || ||||| |||||||| |||||||| || || |||||
Sbjct: 413 gttcgatcgtgagagcttcgatctcgtgattgagaaaggcaccatggacgtattatttgt 472

                                                                       
Query: 460 ggacagtggtgatccatggaaccccaatcctacaacagtggataatgtaaccaaaatgct 519
           ||||||||||||||| |||||||| ||||||||||||||||||||||| |  ||||||||
Sbjct: 473 ggacagtggtgatccttggaacccaaatcctacaacagtggataatgtgatgaaaatgct 532

                                                                       
Query: 520 tgaaggtatccacaaggttttgaagccagatggcaaatttgtatcaattacctttggaca 579
           ||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||
Sbjct: 533 tgaaggtatccacaaggttttgaagcctgaaggcatatttgtatcaattacctttggaca 592

                                                                       
Query: 580 gccacacttccgtcgtcgatttttcgaagcacctgagcttacatggtctgttgagtggaa 639
           |||||| ||||||||||||||||| |||||||||| | ||||||||||||||||||||| 
Sbjct: 593 gccacatttccgtcgtcgattttttgaagcacctgggtttacatggtctgttgagtggag 652

                                                                       
Query: 640 cacctttggcgatggcttccattatttcttctacatccttcagaagggcaaaagatcacc 699
           ||||||||| ||||||||||||||||||||||| || ||| | |||||||| || |    
Sbjct: 653 cacctttggtgatggcttccattatttcttctatattcttaaaaagggcaagaggttgtt 712

                                                                       
Query: 700 agagtccaccggtcaccaagttacattgcctgctgctccaagcttcaatatgctccatga 759
            || |||| |||| |||||  ||||  |||||||||||||||| | |||||| |||||||
Sbjct: 713 ggattccaacggtaaccaacatacacagcctgctgctccaagcattaatatgttccatga 772

                                                           
Query: 760 tgagctcgaaagcgaggattacttatttcgcacaaatgttgatgagtt 807
            ||||| || || ||||| ||| |||| || |||||||||||||||||
Sbjct: 773 agagcttgagagtgaggactacatattccgaacaaatgttgatgagtt 820



 Score =  188 bits (95), Expect = 3e-44
 Identities = 119/127 (93%)
 Strand = Plus / Plus

                                                                       
Query: 60  cggcggcgatggcggacgacgtcgccccgtgcaccgcatccggctacctcgacccctcct 119
           ||||||||||||| ||||||||||| ||| ||||||| |||| |||||||||||||||||
Sbjct: 73  cggcggcgatggccgacgacgtcgcgccgcgcaccgcctccgcctacctcgacccctcct 132

                                                                       
Query: 120 actgggacgggcggttcgggaaggaggagcactacgagtggttcaaggacttctcccact 179
           ||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 133 actgggacgagcggttcgggaaggaggagcactatgagtggttcaaggatttctcccact 192

                  
Query: 180 tccgcca 186
           |||||||
Sbjct: 193 tccgcca 199

to top

>emb|CT832265.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA054P11, full
           insert sequence
          Length = 1175

 Score =  539 bits (272), Expect = e-150
 Identities = 509/588 (86%)
 Strand = Plus / Plus

                                                                       
Query: 220 ggttctggaggtcggctgcggcaattcgcggctcggggaggagctcttaagggagggcgt 279
           |||||| ||||| || || ||||| ||||||||||||||||||||  |  ||||||||||
Sbjct: 328 ggttcttgaggttgggtgtggcaactcgcggctcggggaggagctgctgcgggagggcgt 387

                                                                       
Query: 280 cgccggcggcgtcacctgcatcgacctctcgcccgtcgccgtccagaggatgcgcgacag 339
           |||||||||| |||||||| |||||||||||||||||||||||||| ||||||| ||| |
Sbjct: 388 cgccggcggcatcacctgcgtcgacctctcgcccgtcgccgtccagcggatgcgtgaccg 447

                                                                       
Query: 340 actggcggagcagggcaccactggtgtggatgtggtggtggctgacatgcttgaccttcc 399
            || |||||||||||||||   |||||||| || |||||||| ||||||||||| || ||
Sbjct: 448 ccttgcggagcagggcaccgagggtgtggaggttgtggtggcggacatgcttgatctgcc 507

                                                                       
Query: 400 gttcgagagcgagagcttcgaccttgtgatcgagaaagggaccatggatgtgttgtttgt 459
           ||||||  | ||||||||||| || ||||| |||||||| |||||||| || || |||||
Sbjct: 508 gttcgatcgtgagagcttcgatctcgtgattgagaaaggcaccatggacgtattatttgt 567

                                                                       
Query: 460 ggacagtggtgatccatggaaccccaatcctacaacagtggataatgtaaccaaaatgct 519
           ||||||||||||||| |||||||| ||||||||||||||||||||||| |  ||||||||
Sbjct: 568 ggacagtggtgatccttggaacccaaatcctacaacagtggataatgtgatgaaaatgct 627

                                                                       
Query: 520 tgaaggtatccacaaggttttgaagccagatggcaaatttgtatcaattacctttggaca 579
           ||||||||||||||||| |||||| || || |||| ||||||||||||||||||||||||
Sbjct: 628 tgaaggtatccacaagggtttgaaccctgaaggcatatttgtatcaattacctttggaca 687

                                                                       
Query: 580 gccacacttccgtcgtcgatttttcgaagcacctgagcttacatggtctgttgagtggaa 639
           |||||| ||||||||||||||||| |||||||||| | ||||||||||||||||||||| 
Sbjct: 688 gccacatttccgtcgtcgattttttgaagcacctgggtttacatggtctgttgagtggag 747

                                                                       
Query: 640 cacctttggcgatggcttccattatttcttctacatccttcagaagggcaaaagatcacc 699
           ||||||||| ||||||||||||||||||||||| || ||| | |||||||| || |    
Sbjct: 748 cacctttggtgatggcttccattatttcttctatattcttaaaaagggcaagaggttgtt 807

                                                                       
Query: 700 agagtccaccggtcaccaagttacattgcctgctgctccaagcttcaatatgctccatga 759
            || |||| |||| |||||  ||||  |||||||||||||||| | |||||| |||||||
Sbjct: 808 ggattccaacggtaaccaacatacacagcctgctgctccaagcattaatatgttccatga 867

                                                           
Query: 760 tgagctcgaaagcgaggattacttatttcgcacaaatgttgatgagtt 807
            ||||| || || ||||| ||| |||| || |||||||||||||||||
Sbjct: 868 agagcttgagagtgaggactacatattccgaacaaatgttgatgagtt 915



 Score =  180 bits (91), Expect = 7e-42
 Identities = 118/127 (92%)
 Strand = Plus / Plus

                                                                       
Query: 60  cggcggcgatggcggacgacgtcgccccgtgcaccgcatccggctacctcgacccctcct 119
           ||||||||||||| ||||||||||| ||| ||||||| |||| |||||||||||||||||
Sbjct: 168 cggcggcgatggccgacgacgtcgcgccgcgcaccgcctccgcctacctcgacccctcct 227

                                                                       
Query: 120 actgggacgggcggttcgggaaggaggagcactacgagtggttcaaggacttctcccact 179
           ||||||||| |||||||||||| ||||||||||| |||||||||||||| ||||||||||
Sbjct: 228 actgggacgagcggttcgggaaagaggagcactatgagtggttcaaggatttctcccact 287

                  
Query: 180 tccgcca 186
           |||||||
Sbjct: 288 tccgcca 294

to top

>gb|AC137753.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084M23,
              complete sequence
          Length = 134180

 Score =  186 bits (94), Expect = 1e-43
 Identities = 118/126 (93%)
 Strand = Plus / Plus

                                                                          
Query: 455    tttgtggacagtggtgatccatggaaccccaatcctacaacagtggataatgtaaccaaa 514
              |||||||||||||||||||| |||||||| ||||||||||||||||||||||| |  |||
Sbjct: 132669 tttgtggacagtggtgatccttggaacccaaatcctacaacagtggataatgtgatgaaa 132728

                                                                          
Query: 515    atgcttgaaggtatccacaaggttttgaagccagatggcaaatttgtatcaattaccttt 574
              |||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||
Sbjct: 132729 atgcttgaaggtatccacaaggttttgaagcctgaaggcatatttgtatcaattaccttt 132788

                    
Query: 575    ggacag 580
              ||||||
Sbjct: 132789 ggacag 132794



 Score =  141 bits (71), Expect = 6e-30
 Identities = 122/139 (87%)
 Strand = Plus / Plus

                                                                          
Query: 220    ggttctggaggtcggctgcggcaattcgcggctcggggaggagctcttaagggagggcgt 279
              |||||| ||||| || || ||||| ||||||||||||||||||||  |  ||||||||||
Sbjct: 131887 ggttcttgaggttgggtgtggcaactcgcggctcggggaggagctgctgcgggagggcgt 131946

                                                                          
Query: 280    cgccggcggcgtcacctgcatcgacctctcgcccgtcgccgtccagaggatgcgcgacag 339
              |||||||||| |||||||| | |||||||||||||||||||||||| ||||||| ||| |
Sbjct: 131947 cgccggcggcatcacctgcgttgacctctcgcccgtcgccgtccagcggatgcgtgaccg 132006

                                 
Query: 340    actggcggagcagggcacc 358
               || |||||||||||||||
Sbjct: 132007 cctcgcggagcagggcacc 132025



 Score =  141 bits (71), Expect = 6e-30
 Identities = 89/95 (93%)
 Strand = Plus / Plus

                                                                          
Query: 578    cagccacacttccgtcgtcgatttttcgaagcacctgagcttacatggtctgttgagtgg 637
              |||||||| ||||||||||||||||| |||||||||| | ||||||||||||||||||||
Sbjct: 133060 cagccacatttccgtcgtcgattttttgaagcacctgggtttacatggtctgttgagtgg 133119

                                                 
Query: 638    aacacctttggcgatggcttccattatttcttcta 672
              | ||||||||| |||||||||||||||||||||||
Sbjct: 133120 agcacctttggtgatggcttccattatttcttcta 133154



 Score =  103 bits (52), Expect = 1e-18
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                          
Query: 123    gggacgggcggttcgggaaggaggagcactacgagtggttcaaggacttctcccacttcc 182
              |||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 131652 gggacgagcggttcgggaaggaggagcactatgagtggttcaaggatttctcccacttcc 131711

                  
Query: 183    gcca 186
              ||||
Sbjct: 131712 gcca 131715



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                          
Query: 60     cggcggcgatggcggacgacgtcgccccgtgcaccgcatccggctacctcgacccctcct 119
              ||||||||||||| ||||||||||| ||| ||||||| |||| |||||||||||||||||
Sbjct: 131480 cggcggcgatggccgacgacgtcgcgccgcgcaccgcctccgcctacctcgacccctcct 131539

                   
Query: 120    actgg 124
              |||||
Sbjct: 131540 actgg 131544



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                          
Query: 362    ggtgtggatgtggtggtggctgacatgcttgaccttccgttcgagagcgagagcttcgac 421
              |||||||| || |||||||| ||||||||||| || ||||||||  | ||||||||||| 
Sbjct: 132156 ggtgtggaggttgtggtggcggacatgcttgatctgccgttcgatcgtgagagcttcgat 132215

                                       
Query: 422    cttgtgatcgagaaagggaccatgg 446
              || ||||| |||||||| |||||||
Sbjct: 132216 ctcgtgattgagaaaggcaccatgg 132240



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                          
Query: 727    gcctgctgctccaagcttcaatatgctccatgatgagctcgaaagcgaggattacttatt 786
              |||||||||||||||| | |||||| ||||||| ||||| || || ||||| ||| ||||
Sbjct: 133388 gcctgctgctccaagcattaatatgttccatgaagagcttgagagtgaggactacatatt 133447

                                   
Query: 787    tcgcacaaatgttgatgagtt 807
               || |||||||||||||||||
Sbjct: 133448 ccgaacaaatgttgatgagtt 133468

to top

>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0038B22, complete sequence
          Length = 177557

 Score =  186 bits (94), Expect = 1e-43
 Identities = 118/126 (93%)
 Strand = Plus / Plus

                                                                         
Query: 455   tttgtggacagtggtgatccatggaaccccaatcctacaacagtggataatgtaaccaaa 514
             |||||||||||||||||||| |||||||| ||||||||||||||||||||||| |  |||
Sbjct: 69432 tttgtggacagtggtgatccttggaacccaaatcctacaacagtggataatgtgatgaaa 69491

                                                                         
Query: 515   atgcttgaaggtatccacaaggttttgaagccagatggcaaatttgtatcaattaccttt 574
             |||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||
Sbjct: 69492 atgcttgaaggtatccacaaggttttgaagcctgaaggcatatttgtatcaattaccttt 69551

                   
Query: 575   ggacag 580
             ||||||
Sbjct: 69552 ggacag 69557



 Score =  141 bits (71), Expect = 6e-30
 Identities = 122/139 (87%)
 Strand = Plus / Plus

                                                                         
Query: 220   ggttctggaggtcggctgcggcaattcgcggctcggggaggagctcttaagggagggcgt 279
             |||||| ||||| || || ||||| ||||||||||||||||||||  |  ||||||||||
Sbjct: 68650 ggttcttgaggttgggtgtggcaactcgcggctcggggaggagctgctgcgggagggcgt 68709

                                                                         
Query: 280   cgccggcggcgtcacctgcatcgacctctcgcccgtcgccgtccagaggatgcgcgacag 339
             |||||||||| |||||||| | |||||||||||||||||||||||| ||||||| ||| |
Sbjct: 68710 cgccggcggcatcacctgcgttgacctctcgcccgtcgccgtccagcggatgcgtgaccg 68769

                                
Query: 340   actggcggagcagggcacc 358
              || |||||||||||||||
Sbjct: 68770 cctcgcggagcagggcacc 68788



 Score =  141 bits (71), Expect = 6e-30
 Identities = 89/95 (93%)
 Strand = Plus / Plus

                                                                         
Query: 578   cagccacacttccgtcgtcgatttttcgaagcacctgagcttacatggtctgttgagtgg 637
             |||||||| ||||||||||||||||| |||||||||| | ||||||||||||||||||||
Sbjct: 69823 cagccacatttccgtcgtcgattttttgaagcacctgggtttacatggtctgttgagtgg 69882

                                                
Query: 638   aacacctttggcgatggcttccattatttcttcta 672
             | ||||||||| |||||||||||||||||||||||
Sbjct: 69883 agcacctttggtgatggcttccattatttcttcta 69917



 Score =  103 bits (52), Expect = 1e-18
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                         
Query: 123   gggacgggcggttcgggaaggaggagcactacgagtggttcaaggacttctcccacttcc 182
             |||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 68415 gggacgagcggttcgggaaggaggagcactatgagtggttcaaggatttctcccacttcc 68474

                 
Query: 183   gcca 186
             ||||
Sbjct: 68475 gcca 68478



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                         
Query: 60    cggcggcgatggcggacgacgtcgccccgtgcaccgcatccggctacctcgacccctcct 119
             ||||||||||||| ||||||||||| ||| ||||||| |||| |||||||||||||||||
Sbjct: 68243 cggcggcgatggccgacgacgtcgcgccgcgcaccgcctccgcctacctcgacccctcct 68302

                  
Query: 120   actgg 124
             |||||
Sbjct: 68303 actgg 68307



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                         
Query: 362   ggtgtggatgtggtggtggctgacatgcttgaccttccgttcgagagcgagagcttcgac 421
             |||||||| || |||||||| ||||||||||| || ||||||||  | ||||||||||| 
Sbjct: 68919 ggtgtggaggttgtggtggcggacatgcttgatctgccgttcgatcgtgagagcttcgat 68978

                                      
Query: 422   cttgtgatcgagaaagggaccatgg 446
             || ||||| |||||||| |||||||
Sbjct: 68979 ctcgtgattgagaaaggcaccatgg 69003



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                         
Query: 727   gcctgctgctccaagcttcaatatgctccatgatgagctcgaaagcgaggattacttatt 786
             |||||||||||||||| | |||||| ||||||| ||||| || || ||||| ||| ||||
Sbjct: 70151 gcctgctgctccaagcattaatatgttccatgaagagcttgagagtgaggactacatatt 70210

                                  
Query: 787   tcgcacaaatgttgatgagtt 807
              || |||||||||||||||||
Sbjct: 70211 ccgaacaaatgttgatgagtt 70231

to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score =  186 bits (94), Expect = 1e-43
 Identities = 118/126 (93%)
 Strand = Plus / Plus

                                                                            
Query: 455      tttgtggacagtggtgatccatggaaccccaatcctacaacagtggataatgtaaccaaa 514
                |||||||||||||||||||| |||||||| ||||||||||||||||||||||| |  |||
Sbjct: 19892365 tttgtggacagtggtgatccttggaacccaaatcctacaacagtggataatgtgatgaaa 19892424

                                                                            
Query: 515      atgcttgaaggtatccacaaggttttgaagccagatggcaaatttgtatcaattaccttt 574
                |||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||
Sbjct: 19892425 atgcttgaaggtatccacaaggttttgaagcctgaaggcatatttgtatcaattaccttt 19892484

                      
Query: 575      ggacag 580
                ||||||
Sbjct: 19892485 ggacag 19892490



 Score =  141 bits (71), Expect = 6e-30
 Identities = 122/139 (87%)
 Strand = Plus / Plus

                                                                            
Query: 220      ggttctggaggtcggctgcggcaattcgcggctcggggaggagctcttaagggagggcgt 279
                |||||| ||||| || || ||||| ||||||||||||||||||||  |  ||||||||||
Sbjct: 19891583 ggttcttgaggttgggtgtggcaactcgcggctcggggaggagctgctgcgggagggcgt 19891642

                                                                            
Query: 280      cgccggcggcgtcacctgcatcgacctctcgcccgtcgccgtccagaggatgcgcgacag 339
                |||||||||| |||||||| | |||||||||||||||||||||||| ||||||| ||| |
Sbjct: 19891643 cgccggcggcatcacctgcgttgacctctcgcccgtcgccgtccagcggatgcgtgaccg 19891702

                                   
Query: 340      actggcggagcagggcacc 358
                 || |||||||||||||||
Sbjct: 19891703 cctcgcggagcagggcacc 19891721



 Score =  141 bits (71), Expect = 6e-30
 Identities = 89/95 (93%)
 Strand = Plus / Plus

                                                                            
Query: 578      cagccacacttccgtcgtcgatttttcgaagcacctgagcttacatggtctgttgagtgg 637
                |||||||| ||||||||||||||||| |||||||||| | ||||||||||||||||||||
Sbjct: 19892756 cagccacatttccgtcgtcgattttttgaagcacctgggtttacatggtctgttgagtgg 19892815

                                                   
Query: 638      aacacctttggcgatggcttccattatttcttcta 672
                | ||||||||| |||||||||||||||||||||||
Sbjct: 19892816 agcacctttggtgatggcttccattatttcttcta 19892850



 Score =  103 bits (52), Expect = 1e-18
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                            
Query: 123      gggacgggcggttcgggaaggaggagcactacgagtggttcaaggacttctcccacttcc 182
                |||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 19891348 gggacgagcggttcgggaaggaggagcactatgagtggttcaaggatttctcccacttcc 19891407

                    
Query: 183      gcca 186
                ||||
Sbjct: 19891408 gcca 19891411



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                            
Query: 60       cggcggcgatggcggacgacgtcgccccgtgcaccgcatccggctacctcgacccctcct 119
                ||||||||||||| ||||||||||| ||| ||||||| |||| |||||||||||||||||
Sbjct: 19891176 cggcggcgatggccgacgacgtcgcgccgcgcaccgcctccgcctacctcgacccctcct 19891235

                     
Query: 120      actgg 124
                |||||
Sbjct: 19891236 actgg 19891240



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                            
Query: 362      ggtgtggatgtggtggtggctgacatgcttgaccttccgttcgagagcgagagcttcgac 421
                |||||||| || |||||||| ||||||||||| || ||||||||  | ||||||||||| 
Sbjct: 19891852 ggtgtggaggttgtggtggcggacatgcttgatctgccgttcgatcgtgagagcttcgat 19891911

                                         
Query: 422      cttgtgatcgagaaagggaccatgg 446
                || ||||| |||||||| |||||||
Sbjct: 19891912 ctcgtgattgagaaaggcaccatgg 19891936



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                            
Query: 727      gcctgctgctccaagcttcaatatgctccatgatgagctcgaaagcgaggattacttatt 786
                |||||||||||||||| | |||||| ||||||| ||||| || || ||||| ||| ||||
Sbjct: 19893084 gcctgctgctccaagcattaatatgttccatgaagagcttgagagtgaggactacatatt 19893143

                                     
Query: 787      tcgcacaaatgttgatgagtt 807
                 || |||||||||||||||||
Sbjct: 19893144 ccgaacaaatgttgatgagtt 19893164

to top

>ref|NM_119601.3| Arabidopsis thaliana S-adenosylmethionine-dependent
           methyltransferase/ catalytic (AT4G34360) mRNA, complete
           cds
          Length = 1023

 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 638 aacacctttggcgatggcttccattatttcttcta 672
           ||||| |||||||||||||||||||||||||||||
Sbjct: 644 aacacttttggcgatggcttccattatttcttcta 678



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 431 gagaaagggaccatggatgtgttgtttgtggacagtggtgatccatggaa 480
           ||||||||||||||||||||  ||||||||||   ||||||||| |||||
Sbjct: 437 gagaaagggaccatggatgtactgtttgtggatgctggtgatccttggaa 486

to top

>gb|BT015517.1| Arabidopsis thaliana At4g34360 mRNA sequence
          Length = 744

 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 638 aacacctttggcgatggcttccattatttcttcta 672
           ||||| |||||||||||||||||||||||||||||
Sbjct: 571 aacacttttggcgatggcttccattatttcttcta 605



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 431 gagaaagggaccatggatgtgttgtttgtggacagtggtgatccatggaa 480
           ||||||||||||||||||||  ||||||||||   ||||||||| |||||
Sbjct: 364 gagaaagggaccatggatgtactgtttgtggatgctggtgatccttggaa 413

to top

>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81
          Length = 195921

 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                
Query: 638   aacacctttggcgatggcttccattatttcttcta 672
             ||||| |||||||||||||||||||||||||||||
Sbjct: 78912 aacacttttggcgatggcttccattatttcttcta 78946

to top

>emb|AL035521.1|ATF10M10 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M10 (ESSA project)
          Length = 114367

 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                
Query: 638   aacacctttggcgatggcttccattatttcttcta 672
             ||||| |||||||||||||||||||||||||||||
Sbjct: 70393 aacacttttggcgatggcttccattatttcttcta 70427

to top

>emb|BX829043.1|CNS0A2J6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL63ZD07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 988

 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 638 aacacctttggcgatggcttccattatttcttcta 672
           ||||| |||||||||||||||||||||||||||||
Sbjct: 644 aacacttttggcgatggcttccattatttcttcta 678



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 431 gagaaagggaccatggatgtgttgtttgtggacagtggtgatccatggaa 480
           ||||||||||||||||||||  ||||||||||   ||||||||| |||||
Sbjct: 437 gagaaagggaccatggatgtactgtttgtggatgctggtgatccttggaa 486

to top

>gb|AC189325.1| Brassica rapa subsp. pekinensis clone KBrB036M17, complete sequence
          Length = 151101

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                 
Query: 638    aacacctttggcgatggcttccattatttcttcta 672
              ||||| ||||||||||| |||||||||||||||||
Sbjct: 145820 aacacttttggcgatggattccattatttcttcta 145854

to top

>gb|BT015019.1| Arabidopsis thaliana At4g34360 mRNA, complete cds
          Length = 747

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 638 aacacctttggcgatggcttccattatttcttcta 672
           ||||| ||||||||||||||||||||||| |||||
Sbjct: 574 aacacttttggcgatggcttccattattttttcta 608



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 431 gagaaagggaccatggatgtgttgtttgtggacagtggtgatccatggaa 480
           ||||||||||||||||||||  ||||||||||   ||||||||| |||||
Sbjct: 367 gagaaagggaccatggatgtactgtttgtggatgctggtgatccttggaa 416

to top

>gb|BT014787.1| Arabidopsis thaliana At4g34360 gene, complete cds
          Length = 974

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 638 aacacctttggcgatggcttccattatttcttcta 672
           ||||| ||||||||||||||||||||||| |||||
Sbjct: 630 aacacttttggcgatggcttccattattttttcta 664



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 431 gagaaagggaccatggatgtgttgtttgtggacagtggtgatccatggaa 480
           ||||||||||||||||||||  ||||||||||   ||||||||| |||||
Sbjct: 423 gagaaagggaccatggatgtactgtttgtggatgctggtgatccttggaa 472

to top

>emb|CT833437.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRN128B22, full
           insert sequence
          Length = 1107

 Score = 44.1 bits (22), Expect = 1.00
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 59  gcggcggcgatggcggacgacg 80
           ||||||||||||||||||||||
Sbjct: 183 gcggcggcgatggcggacgacg 204

to top

>ref|NM_001055530.1| Oryza sativa (japonica cultivar-group) Os03g0152800 (Os03g0152800)
            mRNA, complete cds
          Length = 3353

 Score = 44.1 bits (22), Expect = 1.00
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 958  gatctctgtatcatcagaactg 979
            ||||||||||||||||||||||
Sbjct: 2287 gatctctgtatcatcagaactg 2308

to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 44.1 bits (22), Expect = 1.00
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 958     gatctctgtatcatcagaactg 979
               ||||||||||||||||||||||
Sbjct: 2892829 gatctctgtatcatcagaactg 2892850



 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 59       gcggcggcgatggcggacgac 79
                |||||||||||||||||||||
Sbjct: 28595380 gcggcggcgatggcggacgac 28595360

to top

>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0016I15, complete sequence
          Length = 166282

 Score = 44.1 bits (22), Expect = 1.00
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 958   gatctctgtatcatcagaactg 979
             ||||||||||||||||||||||
Sbjct: 30205 gatctctgtatcatcagaactg 30226

to top

>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0038D20, from chromosome 3, complete sequence
          Length = 165395

 Score = 44.1 bits (22), Expect = 1.00
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 958    gatctctgtatcatcagaactg 979
              ||||||||||||||||||||||
Sbjct: 164674 gatctctgtatcatcagaactg 164695

to top

>dbj|AK100518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100H08, full
            insert sequence
          Length = 2881

 Score = 44.1 bits (22), Expect = 1.00
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 958  gatctctgtatcatcagaactg 979
            ||||||||||||||||||||||
Sbjct: 2191 gatctctgtatcatcagaactg 2212

to top

>dbj|AK066205.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059O10, full
            insert sequence
          Length = 3354

 Score = 44.1 bits (22), Expect = 1.00
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 958  gatctctgtatcatcagaactg 979
            ||||||||||||||||||||||
Sbjct: 2288 gatctctgtatcatcagaactg 2309

to top

>dbj|AK062056.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-C05, full
            insert sequence
          Length = 2024

 Score = 44.1 bits (22), Expect = 1.00
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 958  gatctctgtatcatcagaactg 979
            ||||||||||||||||||||||
Sbjct: 1006 gatctctgtatcatcagaactg 1027

to top

>emb|CT831437.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA055P12, full
           insert sequence
          Length = 974

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 270 gggagggcgtcgccggcggcg 290
           |||||||||||||||||||||
Sbjct: 531 gggagggcgtcgccggcggcg 511

to top

>ref|NM_001060690.1| Oryza sativa (japonica cultivar-group) Os04g0662200 (Os04g0662200)
           mRNA, complete cds
          Length = 952

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 270 gggagggcgtcgccggcggcg 290
           |||||||||||||||||||||
Sbjct: 488 gggagggcgtcgccggcggcg 468

to top

>ref|NM_001054617.1| Oryza sativa (japonica cultivar-group) Os02g0741500 (Os02g0741500)
           mRNA, complete cds
          Length = 2471

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 50  accccgcacgcggcggcgatg 70
           |||||||||||||||||||||
Sbjct: 171 accccgcacgcggcggcgatg 191

to top

>gb|BT018120.1| Zea mays clone EL01N0554A12.c mRNA sequence
          Length = 1667

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 58  cgcggcggcgatggcggacga 78
           |||||||||||||||||||||
Sbjct: 437 cgcggcggcgatggcggacga 417

to top

>gb|AC073871.7| Homo sapiens BAC clone RP11-260H17 from 7, complete sequence
          Length = 100703

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 620   acatggtctgttgagtggaac 640
             |||||||||||||||||||||
Sbjct: 26783 acatggtctgttgagtggaac 26803

to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 270      gggagggcgtcgccggcggcg 290
                |||||||||||||||||||||
Sbjct: 33823694 gggagggcgtcgccggcggcg 33823714

to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 50       accccgcacgcggcggcgatg 70
                |||||||||||||||||||||
Sbjct: 31051928 accccgcacgcggcggcgatg 31051908

to top

>gb|AC022929.6| Homo sapiens, clone RP11-326N17, complete sequence
          Length = 165328

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 909   ttgtacatgccttgttgtgtg 929
             |||||||||||||||||||||
Sbjct: 46698 ttgtacatgccttgttgtgtg 46718

to top

>gb|AC009724.9| Homo sapiens, clone RP11-45N10, complete sequence
          Length = 155630

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 909    ttgtacatgccttgttgtgtg 929
              |||||||||||||||||||||
Sbjct: 133107 ttgtacatgccttgttgtgtg 133087

to top

>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01,
             complete sequence
          Length = 163448

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 270   gggagggcgtcgccggcggcg 290
             |||||||||||||||||||||
Sbjct: 35593 gggagggcgtcgccggcggcg 35613

to top

>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete
             sequence
          Length = 143681

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 59    gcggcggcgatggcggacgac 79
             |||||||||||||||||||||
Sbjct: 98186 gcggcggcgatggcggacgac 98166

to top

>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0516G10
          Length = 148937

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 50     accccgcacgcggcggcgatg 70
              |||||||||||||||||||||
Sbjct: 106884 accccgcacgcggcggcgatg 106864

to top

>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0585G03
          Length = 173649

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 50    accccgcacgcggcggcgatg 70
             |||||||||||||||||||||
Sbjct: 41152 accccgcacgcggcggcgatg 41132

to top

>dbj|AK107934.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-A05, full
           insert sequence
          Length = 952

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 270 gggagggcgtcgccggcggcg 290
           |||||||||||||||||||||
Sbjct: 488 gggagggcgtcgccggcggcg 468

to top

>dbj|AK068867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002E03, full
           insert sequence
          Length = 2472

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 50  accccgcacgcggcggcgatg 70
           |||||||||||||||||||||
Sbjct: 172 accccgcacgcggcggcgatg 192

to top

>gb|AC006017.2|AC006017 Homo sapiens PAC clone RP5-981O7 from 7q34-q36, complete sequence
          Length = 162556

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 790   cacaaatgttgatgagttata 810
             |||||||||||||||||||||
Sbjct: 59759 cacaaatgttgatgagttata 59779


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 156,931,427
Number of extensions: 8168088
Number of successful extensions: 164764
Number of sequences better than 10.0: 39
Number of HSP's gapped: 164764
Number of HSP's successfully gapped: 71
Length of query: 1042
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1019
Effective length of database: 18,503,978,556
Effective search space: 18855554148564
Effective search space used: 18855554148564
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result