ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf45m21 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK111704:Os04g0557200 | 249 | 3e-66 | 2 | U39860:Os04g0557800 | 248 | 5e-66 | 3 | AB021079:Os04g0557800 | 248 | 5e-66 | 4 | AY536428:Os10g0575000 | 83 | 4e-16 | 5 | AK121013:Os01g0235700 | 60 | 3e-09 | 6 | AK064943:Os01g0235700 | 60 | 3e-09 | 7 | AB021080:Os04g0557500 | 58 | 1e-08 | 8 | AK064946:Os01g0705700 | 55 | 8e-08 | 9 | Os02g0136000:Os02g0136000 | 37 | 0.023 | 10 | Os11g0258700:Os11g0258700 | 36 | 0.051 | 11 | AK074015:Os12g0160400 | 33 | 0.43 | 12 | Os01g0748500:Os01g0748500 | 32 | 0.74 | 13 | AK100046:Os03g0131100 | 32 | 0.96 | 14 | AK120745:Os04g0413100 | 31 | 1.6 | 15 | AK063396:Os04g0395100 | 30 | 2.1 | 16 | AK067319:Os01g0236700 | 28 | 8.2 | 17 | AK120729:Os09g0540500 | 28 | 8.2 | 18 | AK109644:Os06g0638400 | 28 | 8.2 |
|---|
>AK111704:Os04g0557200 | Length = 563 Score = 249 bits (635), Expect = 3e-66 Identities = 125/189 (66%), Positives = 140/189 (74%), Gaps = 2/189 (1%) Frame = +2 Query: 113 PSQEEP--PTGKQFSYQLAAAVRSINWSYAIFWSISTSRPGVLTWKDGFYNGEIKTRKVT 286 P QEEP P F LAAAVRSI+WSYAIFWSISTS PGVLTW DGFYNG +KTRK++ Sbjct: 10 PVQEEPLQPGTNHFRSLLAAAVRSISWSYAIFWSISTSCPGVLTWNDGFYNGVVKTRKIS 69 Query: 287 SSADLTADXXXXXXXXXXXXXXXSLLSGQCDHRGRRPAAALSPEDLGDAEWYYAVCMSYA 466 +SADLTA SLLSG+CDHR RRP AALSPEDL D EWYY VCM+Y+ Sbjct: 70 NSADLTAGQLVVQRSEQLRELYYSLLSGECDHRARRPIAALSPEDLADTEWYYVVCMTYS 129 Query: 467 FRPGQGLPGRSFASNEPVWLCNAQCADTKTFQRSLLAKTTSIQTVACIPLMGGVLELGTT 646 F+PGQGLPG+S+ASN VWL NAQ AD+KTF RSLLAK+ SIQT+ CIP GVLELGTT Sbjct: 130 FQPGQGLPGKSYASNASVWLRNAQSADSKTFLRSLLAKSASIQTIICIPFTSGVLELGTT 189 Query: 647 DTSHYNPDL 673 D +P L Sbjct: 190 DPVLEDPKL 198
>U39860:Os04g0557800 | Length = 574 Score = 248 bits (633), Expect = 5e-66 Identities = 124/187 (66%), Positives = 141/187 (75%), Gaps = 2/187 (1%) Frame = +2 Query: 119 QEEP-PTGKQFSYQLAAAVRSINWSYAIFWSISTSRPGVLTWKDGFYNGEIKTRKVTSSA 295 +E P P+GK F QLAAA RSINW+YAIFWSISTSRPGVLTWKDGFYNGEIKTRK+T+S Sbjct: 2 EETPLPSGKNFRSQLAAAARSINWTYAIFWSISTSRPGVLTWKDGFYNGEIKTRKITNSM 61 Query: 296 DLTADXXXXXXXXXXXXXXXSLLSGQCDHRGRRPAAALSPEDLGDAEWYYAVCMSYAFRP 475 +L AD SLLSG+C HR RRP AAL PEDLGD EWYY VCM+YAF P Sbjct: 62 NLMADELVLQRSEQLRELYDSLLSGECGHRARRPVAALLPEDLGDTEWYYVVCMTYAFGP 121 Query: 476 GQGLPGRSFASNEPVWLCNAQCADTKTFQRSLLAKTTSIQTVACIP-LMGGVLELGTTDT 652 QGLPG+SFASNE VWL NAQ AD K F R+L+AK+ SI+T+ C+P +M GVLELGTTD Sbjct: 122 RQGLPGKSFASNEFVWLTNAQSADRKLFHRALIAKSASIKTIVCVPFIMHGVLELGTTDP 181 Query: 653 SHYNPDL 673 +P L Sbjct: 182 ISEDPAL 188
>AB021079:Os04g0557800 | Length = 574 Score = 248 bits (633), Expect = 5e-66 Identities = 124/187 (66%), Positives = 141/187 (75%), Gaps = 2/187 (1%) Frame = +2 Query: 119 QEEP-PTGKQFSYQLAAAVRSINWSYAIFWSISTSRPGVLTWKDGFYNGEIKTRKVTSSA 295 +E P P+GK F QLAAA RSINW+YAIFWSISTSRPGVLTWKDGFYNGEIKTRK+T+S Sbjct: 2 EETPLPSGKNFRSQLAAAARSINWTYAIFWSISTSRPGVLTWKDGFYNGEIKTRKITNSM 61 Query: 296 DLTADXXXXXXXXXXXXXXXSLLSGQCDHRGRRPAAALSPEDLGDAEWYYAVCMSYAFRP 475 +L AD SLLSG+C HR RRP AAL PEDLGD EWYY VCM+YAF P Sbjct: 62 NLMADELVLQRSEQLRELYDSLLSGECGHRARRPVAALLPEDLGDTEWYYVVCMTYAFGP 121 Query: 476 GQGLPGRSFASNEPVWLCNAQCADTKTFQRSLLAKTTSIQTVACIP-LMGGVLELGTTDT 652 QGLPG+SFASNE VWL NAQ AD K F R+L+AK+ SI+T+ C+P +M GVLELGTTD Sbjct: 122 RQGLPGKSFASNEFVWLTNAQSADRKLFHRALIAKSASIKTIVCVPFIMHGVLELGTTDP 181 Query: 653 SHYNPDL 673 +P L Sbjct: 182 ISEDPAL 188
>AY536428:Os10g0575000 | Length = 699 Score = 82.8 bits (203), Expect = 4e-16 Identities = 58/173 (33%), Positives = 87/173 (50%), Gaps = 5/173 (2%) Frame = +2 Query: 185 WSYAIFWSIS---TSRPGVLTWKDGFYNG-EIKTRKVTSSADLTADXXXXXXXXXXXXXX 352 W+YAIFW S ++ +L W DG+Y G + RK SS A Sbjct: 83 WTYAIFWQSSIDVSTGASLLGWGDGYYKGCDDDKRKQRSSTPAAA--AEQEHRKRVLREL 140 Query: 353 XSLLSGQCDHRGRRPAAALSPEDLGDAEWYYAVCMSYAFRPGQGLPGRSFASNEPVWLCN 532 SL++G G P A+ E++ D EW++ V M+ +F G GLPG++ + +P W+ Sbjct: 141 NSLIAGA----GAAPDEAVE-EEVTDTEWFFLVSMTQSFPNGLGLPGQALFAAQPTWI-- 193 Query: 533 AQCADTKTFQRSLLAKTTSIQTVACIPLMGGVLELGTTDTSHYNPD-LPIIRS 688 A + R+ A T ++T+ C+PL GVLELG+TD D +P IR+ Sbjct: 194 ATGLSSAPCDRARQAYTFGLRTMVCLPLATGVLELGSTDVIFQTGDSIPRIRA 246
>AK121013:Os01g0235700 | Length = 617 Score = 59.7 bits (143), Expect = 3e-09 Identities = 49/173 (28%), Positives = 72/173 (41%), Gaps = 5/173 (2%) Frame = +2 Query: 185 WSYAIFWSISTSRPG--VLTWKDGFYNGEIKTRKVTSSADLTADXXXXXXXXXXXXXXXS 358 W+YAIFW +S ++ G VL W DG E ++ +A +D S Sbjct: 77 WNYAIFWQLSRTKSGDLVLGWGDGSCR-EPHDGEMGPAASAGSDEAKQRMRKRVLQRLHS 135 Query: 359 LLSGQCDHRGRRPAAALSPEDLGDAEWYYAVCMSYAFRPGQGLPGRSFASNEPVWLCNAQ 538 G D P + + D E ++ M +AF G PG+ FA+ P+W+ N + Sbjct: 136 AFGG-VDEEDYAPGI----DQVTDTEMFFLASMYFAFPRRAGGPGQVFAAGVPLWIPNTE 190 Query: 539 --CADTKTFQRSLLAKTTSIQTVACIPLMGGVLELGTTDTSHYNPD-LPIIRS 688 R LA +T+ +P GVLELG+ + D L IRS Sbjct: 191 RNVFPANYCYRGYLANAAGFRTIVLVPFETGVLELGSMQQVAESSDTLQTIRS 243
>AK064943:Os01g0235700 | Length = 617 Score = 59.7 bits (143), Expect = 3e-09 Identities = 49/173 (28%), Positives = 72/173 (41%), Gaps = 5/173 (2%) Frame = +2 Query: 185 WSYAIFWSISTSRPG--VLTWKDGFYNGEIKTRKVTSSADLTADXXXXXXXXXXXXXXXS 358 W+YAIFW +S ++ G VL W DG E ++ +A +D S Sbjct: 77 WNYAIFWQLSRTKSGDLVLGWGDGSCR-EPHDGEMGPAASAGSDEAKQRMRKRVLQRLHS 135 Query: 359 LLSGQCDHRGRRPAAALSPEDLGDAEWYYAVCMSYAFRPGQGLPGRSFASNEPVWLCNAQ 538 G D P + + D E ++ M +AF G PG+ FA+ P+W+ N + Sbjct: 136 AFGG-VDEEDYAPGI----DQVTDTEMFFLASMYFAFPRRAGGPGQVFAAGVPLWIPNTE 190 Query: 539 --CADTKTFQRSLLAKTTSIQTVACIPLMGGVLELGTTDTSHYNPD-LPIIRS 688 R LA +T+ +P GVLELG+ + D L IRS Sbjct: 191 RNVFPANYCYRGYLANAAGFRTIVLVPFETGVLELGSMQQVAESSDTLQTIRS 243
>AB021080:Os04g0557500 | Length = 329 Score = 57.8 bits (138), Expect = 1e-08 Identities = 30/69 (43%), Positives = 39/69 (56%) Frame = +2 Query: 467 FRPGQGLPGRSFASNEPVWLCNAQCADTKTFQRSLLAKTTSIQTVACIPLMGGVLELGTT 646 F P +G P + + + K F R+LLAK+ SIQT+ CIP M GVLELGTT Sbjct: 4 FDPAKGYPAEAMQAIDLFGCAMLSLQIAKHFLRALLAKSASIQTIVCIPFMSGVLELGTT 63 Query: 647 DTSHYNPDL 673 D +P+L Sbjct: 64 DPVSEDPNL 72
>AK064946:Os01g0705700 | Length = 460 Score = 55.1 bits (131), Expect = 8e-08 Identities = 53/206 (25%), Positives = 80/206 (38%), Gaps = 19/206 (9%) Frame = +2 Query: 113 PSQEEPPTGKQFSYQLAAAVRSI------NWSYAIFWSIST--------SRPGVLTWKDG 250 P + P G S +L A++ + W+Y IFW S + VL W DG Sbjct: 27 PPHLDAPEGSPSSAELQASLHDLVERQGGAWTYGIFWQESRGAGAASGRAARAVLGWGDG 86 Query: 251 FYNGEIKTRKVTSSADLTADXXXXXXXXXXXXXXXSLLSGQCDHRGRRPAAALSPEDLGD 430 +V ++ A L G D G A L + + Sbjct: 87 HCRDGAGHGEVGAAERSVA--------RKRVLLRLHALYGGGDEDGADYALRL--DRVTG 136 Query: 431 AEWYYAVCMSYAFRPGQGLPGRSFASNEPVWLC-----NAQCADTKTFQRSLLAKTTSIQ 595 AE Y+ M ++F G G PGR+ AS W + + + RS LA++ ++ Sbjct: 137 AEMYFLASMYFSFPEGSGGPGRALASGRHAWADVDPHPSGSGSAPGWYVRSSLAQSAGLR 196 Query: 596 TVACIPLMGGVLELGTTDTSHYNPDL 673 TV +P GGVLELG+ P++ Sbjct: 197 TVVFLPCKGGVLELGSVVAIRETPEV 222
>Os02g0136000:Os02g0136000 | Length = 750 Score = 37.0 bits (84), Expect = 0.023 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 9/94 (9%) Frame = +2 Query: 479 QGLPGRSFASNEPVWLCNAQCADTKTFQRSLLAKTTSIQTVACIPLMG--------GVLE 634 QGLP R+F + P W N QC + + R A IQ +P++ VLE Sbjct: 116 QGLPARAFDATAPEWTPNVQCYGSGEYARISYALIYDIQGSLALPILDPDDASSPLAVLE 175 Query: 635 LGTTDTSHYNPDLPIIRSSCHV-NYGTSLKFVTL 733 L TT P++R S V N +L+ V+L Sbjct: 176 LVTT--------APLLRVSGEVANLCNALRAVSL 201
>Os11g0258700:Os11g0258700 | Length = 458 Score = 35.8 bits (81), Expect = 0.051 Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%) Frame = +2 Query: 575 AKTTSIQTVACIP-LMGGVLELGTTDTSHYNPDL 673 +++ SI+T+ C+P +M GVLELGTTD +P L Sbjct: 13 SQSASIKTIVCVPFIMHGVLELGTTDPVSEDPAL 46
>AK074015:Os12g0160400 | Length = 880 Score = 32.7 bits (73), Expect = 0.43 Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 1/24 (4%) Frame = +2 Query: 185 WSYAIFW-SISTSRPGVLTWKDGF 253 WSYA+FW +I + P L W+DGF Sbjct: 16 WSYAVFWKAIGAADPVHLVWEDGF 39
>Os01g0748500:Os01g0748500 | Length = 411 Score = 32.0 bits (71), Expect = 0.74 Identities = 17/57 (29%), Positives = 30/57 (52%) Frame = +2 Query: 548 TKTFQRSLLAKTTSIQTVACIPLMGGVLELGTTDTSHYNPDLPIIRSSCHVNYGTSL 718 +KT QR+ L + ++ V+C+PL+ +L L + P +P C+ +G SL Sbjct: 35 SKTGQRARLVQRLGMERVSCVPLLRRLLLLAAAGLAGAEPQVP-----CYFVFGDSL 86
>AK100046:Os03g0131100 | Length = 942 Score = 31.6 bits (70), Expect = 0.96 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 14/92 (15%) Frame = +2 Query: 440 YYAVCMSYAF------RPGQGLPGRSFASNEPVWLCNAQCADTKTFQRSLLAKTTSIQTV 601 Y V M Y F R GLPGR F P W + + T+ + R A+ I+ Sbjct: 186 YRTVSMKYQFSADESARADLGLPGRVFVGRVPEWTPDVRYFSTEEYPRVQHAQYFDIRGS 245 Query: 602 ACIPLMG-------GVLEL-GTTDTSHYNPDL 673 +P+ GV+EL TT +Y+ ++ Sbjct: 246 VALPVFEPRSRACLGVVELVMTTQKVNYSAEI 277
>AK120745:Os04g0413100 | Length = 182 Score = 30.8 bits (68), Expect = 1.6 Identities = 17/39 (43%), Positives = 23/39 (58%) Frame = -3 Query: 472 AEGIAHADGVVPFGVPEVLRRERGGRAPPPVVALAGQEG 356 +EG+ H D V VLRR R GRA PP +++ G+ G Sbjct: 75 SEGVGHDDDDNQHAVM-VLRRTRSGRAFPPPISVIGKGG 112
>AK063396:Os04g0395100 | Length = 325 Score = 30.4 bits (67), Expect = 2.1 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +2 Query: 581 TTSIQTVACIPLMGGVLELGTTDTSHYNPDLPIIRSSCHVNYGTSLKF 724 TT I C + G L + D + + ++RSSC + YG+SL F Sbjct: 204 TTQIPAPDCARCLRGALSRLSEDFNSTAAGMQLLRSSCMLRYGSSLFF 251
>AK067319:Os01g0236700 | Length = 938 Score = 28.5 bits (62), Expect = 8.2 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 6/65 (9%) Frame = +2 Query: 440 YYAVCMSYAF-----RPGQ-GLPGRSFASNEPVWLCNAQCADTKTFQRSLLAKTTSIQTV 601 Y AV M Y F G+ GLPGR + P W N Q + + R A + ++ Sbjct: 189 YRAVSMMYMFSVDGENAGELGLPGRVYKQKVPEWTPNVQYYSSTEYPRLNHAISYNVHGT 248 Query: 602 ACIPL 616 +P+ Sbjct: 249 VALPV 253
>AK120729:Os09g0540500 | Length = 414 Score = 28.5 bits (62), Expect = 8.2 Identities = 19/89 (21%), Positives = 36/89 (40%) Frame = +1 Query: 13 LLLPVRTTGWTPGFLVSIAQRRK*YGNGATNSSSEPGRTADGEAIQLPARCRCEEHQLEL 192 L +P+ GW PG +++ G A EP + + +PA + +++ Sbjct: 330 LEIPLPPPGWKPGDPITLPPD----GILAGVKGEEPRASVQQMPVVVPAMVPKAQEPIQV 385 Query: 193 RHILVHFNQPSRGTDLEGRVLQRRDKDEE 279 RH+ + N S + V + DE+ Sbjct: 386 RHVDLDINNSSSSDEYSSDVGSSEEDDED 414
>AK109644:Os06g0638400 | Length = 89 Score = 28.5 bits (62), Expect = 8.2 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 3/49 (6%) Frame = -1 Query: 525 SQTGSLLAKLLPGNPWPGRKA*LMQTA*YHS---ASPRSSGESAAAGRL 388 + T SL+A LLPG KA L Q + S ASPRS G + + RL Sbjct: 24 TSTASLMAGLLPGAMAQQAKASLKQASRASSLPSASPRSVGSAMRSSRL 72 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 28,077,182 Number of extensions: 640546 Number of successful extensions: 1687 Number of sequences better than 10.0: 18 Number of HSP's gapped: 1673 Number of HSP's successfully gapped: 18 Length of query: 346 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 245 Effective length of database: 11,355,714 Effective search space: 2782149930 Effective search space used: 2782149930 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
