ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf42k21 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK066463:Os05g0302300 | 221 | e-105 | 2 | AK121381:Os05g0196500 | 155 | 4e-63 | 3 | AK073475:Os10g0577600 | 91 | 3e-18 | 4 | AK068952:Os01g0907400 | 75 | 9e-14 | 5 | AK065251:Os12g0279100 | 75 | 9e-14 | 6 | AK060255:Os02g0696700 | 60 | 3e-09 | 7 | Os06g0590100:Os06g0590100 | 37 | 0.027 | 8 | Os01g0640000:Os01g0640000 | 33 | 0.66 | 9 | Os12g0428300:Os12g0428300 | 30 | 3.3 | 10 | Os04g0262800:Os04g0262800 | 30 | 3.3 | 11 | AK120936:Os10g0317000 | 30 | 3.3 | 12 | AK107074:Os05g0591900 | 30 | 5.6 | 13 | Os02g0323900:Os02g0323900 | 29 | 7.3 | 14 | AK121055:Os04g0191000 | 29 | 7.3 | 15 | AK121250:Os03g0203700 | 29 | 9.6 | 16 | AK100415:Os03g0203700 | 29 | 9.6 |
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>AK066463:Os05g0302300 | Length = 971 Score = 221 bits (564), Expect(2) = e-105 Identities = 104/123 (84%), Positives = 113/123 (91%) Frame = +2 Query: 605 VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 784 VTQLSPSVLKSEG+PVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ Sbjct: 385 VTQLSPSVLKSEGVPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 444 Query: 785 CAVELYRDQRRKTSISHDRLLLKTAQAALRQVWANLHNCRSGQKECIWLDTCGKNGMLTS 964 CAVELYR+QRRKTSISHD+LLLKTA A+RQ+W NL +C+S Q W DTCGK+GMLTS Sbjct: 445 CAVELYREQRRKTSISHDKLLLKTANEAVRQLWMNLSDCKSEQGVYRWQDTCGKDGMLTS 504 Query: 965 ALK 973 A+K Sbjct: 505 AIK 507 Score = 179 bits (454), Expect(2) = e-105 Identities = 86/122 (70%), Positives = 96/122 (78%) Frame = +3 Query: 1041 ILAPLFQIRIKMEGAARETNALLQYKKMGQDYDSTDRECFSCFYDLHLSAVSCHCSPNRF 1220 +L + R+KME AAR N L+YKKM DYDS DRECFSCFYDLHLSAVSC CSPNRF Sbjct: 501 MLTSAIKTRVKMEKAARGGNMALRYKKMDGDYDSADRECFSCFYDLHLSAVSCQCSPNRF 560 Query: 1221 ACLNHANLLCSCEMDRKFVLHRYSMEELNTLVAALEGDPAAVCQWKEYDVDLACQSVSTQ 1400 ACLNHAN+LCSCEMDRK L RY++EEL+TLVAALEGDP AV QW + D+ L C S STQ Sbjct: 561 ACLNHANILCSCEMDRKTALLRYTIEELHTLVAALEGDPTAVYQWGQNDLGLVCPSGSTQ 620 Query: 1401 QK 1406 K Sbjct: 621 YK 622
>AK121381:Os05g0196500 | Length = 1238 Score = 155 bits (392), Expect(2) = 4e-63 Identities = 76/128 (59%), Positives = 91/128 (71%) Frame = +2 Query: 605 VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 784 VTQ SPS+LKSEG+ VYR VQ+ GEFVLT PRAYH+GFNCGFNCAEAVNVAP+DWLP G Sbjct: 448 VTQFSPSLLKSEGVHVYRCVQHEGEFVLTFPRAYHAGFNCGFNCAEAVNVAPIDWLPIGH 507 Query: 785 CAVELYRDQRRKTSISHDRLLLKTAQAALRQVWANLHNCRSGQKECIWLDTCGKNGMLTS 964 AVELYR+Q RK +ISHD+LLL A+ A+R W L R+ W CG + + Sbjct: 508 NAVELYREQARKITISHDKLLLGAAREAIRAQWDILFLKRNTADNMRWKSICGADSTIFK 567 Query: 965 ALKVLLNS 988 ALK + + Sbjct: 568 ALKARIET 575 Score = 105 bits (263), Expect(2) = 4e-63 Identities = 52/116 (44%), Positives = 73/116 (62%), Gaps = 1/116 (0%) Frame = +3 Query: 1065 RIKMEGAARETNAL-LQYKKMGQDYDSTDRECFSCFYDLHLSAVSCHCSPNRFACLNHAN 1241 RI+ E R+T + Q +KM ++DS DREC C+YDLHLSA C C P ++ACL HA Sbjct: 572 RIETELVQRKTLGVPAQSRKMDAEFDSIDRECALCYYDLHLSASGCPCCPEKYACLVHAK 631 Query: 1242 LLCSCEMDRKFVLHRYSMEELNTLVAALEGDPAAVCQWKEYDVDLACQSVSTQQKM 1409 LCSC+ D++F L RY + ELN L AL G +A+ +W D+ L+ S ++K+ Sbjct: 632 QLCSCDWDKRFFLFRYDVNELNILADALGGKLSAIHRWGVSDLGLSLSSCVKREKV 687
>AK073475:Os10g0577600 | Length = 871 Score = 90.5 bits (223), Expect = 3e-18 Identities = 41/86 (47%), Positives = 54/86 (62%) Frame = +2 Query: 602 QVTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHG 781 + T P+VL +PVY+ VQ PGEFV+T PR+YH+GF+ GFNC EAVN A DW P G Sbjct: 366 KTTMFPPNVLLDHNVPVYKAVQKPGEFVITFPRSYHAGFSHGFNCGEAVNFAISDWFPLG 425 Query: 782 QCAVELYRDQRRKTSISHDRLLLKTA 859 A Y R ++H+ LL ++A Sbjct: 426 SVASRRYALLNRTPLLAHEELLCRSA 451
>AK068952:Os01g0907400 | Length = 1286 Score = 75.5 bits (184), Expect = 9e-14 Identities = 39/86 (45%), Positives = 50/86 (58%) Frame = +2 Query: 602 QVTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHG 781 + T +SP VL GIP R+VQN GEFV+T P +YH GF+ GFNC EA N+A +WL Sbjct: 300 KTTVMSPEVLVESGIPCCRLVQNAGEFVVTFPGSYHCGFSHGFNCGEASNIATPEWLRIA 359 Query: 782 QCAVELYRDQRRKTSISHDRLLLKTA 859 + A R +SH +LL A Sbjct: 360 KEAAIRRASINRPPMVSHYQLLYDLA 385
>AK065251:Os12g0279100 | Length = 1366 Score = 75.5 bits (184), Expect = 9e-14 Identities = 40/86 (46%), Positives = 50/86 (58%) Frame = +2 Query: 602 QVTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHG 781 + T LSP VL S G+P R+VQ GEFV+T P AYHSGF+ GFNC EA N+A WL Sbjct: 285 KTTVLSPEVLLSAGVPCCRLVQKAGEFVITFPGAYHSGFSHGFNCGEASNIATPHWLQVA 344 Query: 782 QCAVELYRDQRRKTSISHDRLLLKTA 859 + A +SH +LL + A Sbjct: 345 KEAAIRRASTNCGPMVSHYQLLYELA 370
>AK060255:Os02g0696700 | Length = 473 Score = 60.5 bits (145), Expect = 3e-09 Identities = 29/59 (49%), Positives = 37/59 (62%) Frame = +2 Query: 683 VLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQCAVELYRDQRRKTSISHDRLLLKTA 859 V+T PRAYHSGF+ GFNC EAVN A +W P G A + Y +R + ++ LL K A Sbjct: 1 VITFPRAYHSGFSHGFNCGEAVNFAIGEWFPLGALASQRYALLKRTPLLPYEELLCKEA 59
>Os06g0590100:Os06g0590100 | Length = 1399 Score = 37.4 bits (85), Expect = 0.027 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +2 Query: 254 PNSLLLVHAKGTCFDCD*KYARGH*CARLFLI 349 P L +G C++CD K+ RGH CARLF I Sbjct: 315 PAELAERRKQGLCYNCDEKFVRGHRCARLFYI 346
>Os01g0640000:Os01g0640000 | Length = 1660 Score = 32.7 bits (73), Expect = 0.66 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +2 Query: 254 PNSLLLVHAKGTCFDCD*KYARGH*CARLFLIYI 355 P + ++G C++CD KY GH C + F+I + Sbjct: 437 PAEMAQRRSEGLCYNCDEKYVAGHRCKKSFVIEV 470
>Os12g0428300:Os12g0428300 | Length = 1132 Score = 30.4 bits (67), Expect = 3.3 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +2 Query: 278 AKGTCFDCD*KYARGH*CAR 337 A+G CF C KYA GH CA+ Sbjct: 429 AQGLCFKCGEKYAPGHVCAK 448
>Os04g0262800:Os04g0262800 | Length = 1425 Score = 30.4 bits (67), Expect = 3.3 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 2/25 (8%) Frame = +2 Query: 281 KGTCFDCD*KYARGH--*CARLFLI 349 +G CF+CD Y+RGH C RLF + Sbjct: 333 QGLCFNCDEPYSRGHNRVCRRLFFL 357
>AK120936:Os10g0317000 | Length = 1476 Score = 30.4 bits (67), Expect = 3.3 Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 2/29 (6%) Frame = +2 Query: 284 GTCFDCD*KYARGH--*CARLFLIYIKGG 364 G C++CD KY+R H C RLF +++GG Sbjct: 276 GLCYNCDEKYSRSHNKVCKRLF--FVEGG 302
>AK107074:Os05g0591900 | Length = 154 Score = 29.6 bits (65), Expect = 5.6 Identities = 17/53 (32%), Positives = 21/53 (39%) Frame = +1 Query: 553 CKCFCTFIHFHSEFLCAGYTVIPFCSKIRRNSCLPCCSESRRVRSDITASLPF 711 C C C HS FL GY+ + +S LPC R + LPF Sbjct: 9 CNCCCCSSILHSRFLRLGYSQTHTHTHTLCSSLLPCVLVIRVASFSLPPHLPF 61
>Os02g0323900:Os02g0323900 | Length = 1128 Score = 29.3 bits (64), Expect = 7.3 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%) Frame = +2 Query: 284 GTCFDCD*KYARGH--*CARLFLI 349 G C++CD +Y RGH C R+F I Sbjct: 218 GLCYNCDERYTRGHNRVCRRVFFI 241
>AK121055:Os04g0191000 | Length = 1463 Score = 29.3 bits (64), Expect = 7.3 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 2/25 (8%) Frame = +2 Query: 281 KGTCFDCD*KYARGH--*CARLFLI 349 +G CF+C+ K+ RGH C RLF + Sbjct: 277 QGLCFNCNEKFTRGHNRFCRRLFFV 301
>AK121250:Os03g0203700 | Length = 1019 Score = 28.9 bits (63), Expect = 9.6 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 6/55 (10%) Frame = +2 Query: 623 SVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNC------GFNCAEAVNVAPVDW 769 +VL S I + +VQ G+F T P FNC G A AV + PVD+ Sbjct: 965 AVLGSTVIFQFIIVQFLGDFANTTPLTLKQWFNCIFIGFIGMPIAAAVKLIPVDF 1019
>AK100415:Os03g0203700 | Length = 1019 Score = 28.9 bits (63), Expect = 9.6 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 6/55 (10%) Frame = +2 Query: 623 SVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNC------GFNCAEAVNVAPVDW 769 +VL S I + +VQ G+F T P FNC G A AV + PVD+ Sbjct: 965 AVLGSTVIFQFIIVQFLGDFANTTPLTLKQWFNCIFIGFIGMPIAAAVKLIPVDF 1019 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 43,413,359 Number of extensions: 1027627 Number of successful extensions: 2423 Number of sequences better than 10.0: 16 Number of HSP's gapped: 2423 Number of HSP's successfully gapped: 18 Length of query: 485 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 380 Effective length of database: 11,195,550 Effective search space: 4254309000 Effective search space used: 4254309000 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
