ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf42k21 |
|---|---|
| Clone Library Name | barley_pub |
>Q61T02:JAD1_CAEBR Histone demethylase rbr-2 - Caenorhabditis briggsae| Length = 1436 Score = 100 bits (249), Expect = 2e-20 Identities = 48/91 (52%), Positives = 61/91 (67%) Frame = +2 Query: 593 FFVQVTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWL 772 F T +PS+L+S G+P+Y V QN GEFV+T PRAYH+G+N G N AEAVN AP+DWL Sbjct: 521 FHHMTTAANPSLLRSLGVPIYSVHQNAGEFVITFPRAYHAGYNEGLNFAEAVNFAPIDWL 580 Query: 773 PHGQCAVELYRDQRRKTSISHDRLLLKTAQA 865 G+ V+ Y + RR SHD LL K +A Sbjct: 581 AKGRECVQSYSNVRRYLVFSHDELLFKMIEA 611 Score = 31.6 bits (70), Expect = 8.8 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 1/80 (1%) Frame = +3 Query: 1149 RECFSCFYDLHLSAVSCHCSPNRFACLNHANLLC-SCEMDRKFVLHRYSMEELNTLVAAL 1325 R C C L + A+ C+ R C+ H + LC +C +RY ++ L L L Sbjct: 664 RSCRFCKTTLFMCALICN-KHKRMTCVEHHDHLCKTCTPKDYKYQYRYEIDNLTHLFDEL 722 Query: 1326 EGDPAAVCQWKEYDVDLACQ 1385 W+E D D+ Q Sbjct: 723 GKRTVDTAGWQEDDDDMYTQ 742
>Q23541:JAD1_CAEEL Histone demethylase rbr-2 - Caenorhabditis elegans| Length = 1477 Score = 99.4 bits (246), Expect = 3e-20 Identities = 48/91 (52%), Positives = 60/91 (65%) Frame = +2 Query: 593 FFVQVTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWL 772 F T +P +L+S G+P++ V QN GEFV+T PRAYH+GFN G N AEAVN AP+DWL Sbjct: 564 FHHMTTAANPHLLRSLGVPIHSVHQNAGEFVITFPRAYHAGFNEGLNFAEAVNFAPIDWL 623 Query: 773 PHGQCAVELYRDQRRKTSISHDRLLLKTAQA 865 G+ VE Y + RR SHD LL K +A Sbjct: 624 SKGRECVESYSNVRRYLVFSHDELLFKMVEA 654
>Q5F3R2:JAD1B_CHICK Histone demethylase JARID1B - Gallus gallus (Chicken)| Length = 1522 Score = 97.4 bits (241), Expect = 1e-19 Identities = 48/88 (54%), Positives = 58/88 (65%) Frame = +2 Query: 605 VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 784 VT ++P+ L + G+PVYR Q GEFV+T PRAYHSGFN GFN AEAVN VDWLP G+ Sbjct: 528 VTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGR 587 Query: 785 CAVELYRDQRRKTSISHDRLLLKTAQAA 868 +E YR R SHD ++ K A A Sbjct: 588 QCIEHYRLLSRYCVFSHDEMICKMASKA 615 Score = 53.1 bits (126), Expect = 3e-06 Identities = 24/74 (32%), Positives = 39/74 (52%) Frame = +3 Query: 1134 YDSTDRECFSCFYDLHLSAVSCHCSPNRFACLNHANLLCSCEMDRKFVLHRYSMEELNTL 1313 + +R+C+ C +SAV C C P CL H LCSC + + +RY++EEL + Sbjct: 660 FPDDERQCYKCKTTCFMSAVYCPCKPGLLVCLYHVEDLCSCPTYQYKLGYRYTLEELYPM 719 Query: 1314 VAALEGDPAAVCQW 1355 + AL+ + +W Sbjct: 720 MNALKMRAESYNEW 733
>Q3UXZ9:JAD1A_MOUSE Histone demethylase JARID1A - Mus musculus (Mouse)| Length = 1690 Score = 95.9 bits (237), Expect = 4e-19 Identities = 47/85 (55%), Positives = 56/85 (65%) Frame = +2 Query: 605 VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 784 VT ++P+VL G+PVYR Q GEFV+T PRAYHSGFN G+N AEAVN DWLP G+ Sbjct: 537 VTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGR 596 Query: 785 CAVELYRDQRRKTSISHDRLLLKTA 859 V YR RR SH+ L+ K A Sbjct: 597 QCVNHYRRLRRHCVFSHEELIFKMA 621 Score = 57.8 bits (138), Expect = 1e-07 Identities = 24/57 (42%), Positives = 36/57 (63%) Frame = +3 Query: 1146 DRECFSCFYDLHLSAVSCHCSPNRFACLNHANLLCSCEMDRKFVLHRYSMEELNTLV 1316 +R+C +C LSA++C C+P R CL H LCSC M K + +RY +E+L +L+ Sbjct: 673 ERQCSACRTTCFLSALTCSCNPERLVCLYHPTDLCSCPMQNKCLRYRYPLEDLPSLL 729
>P29375:JAD1A_HUMAN Histone demethylase JARID1A - Homo sapiens (Human)| Length = 1722 Score = 95.9 bits (237), Expect = 4e-19 Identities = 47/85 (55%), Positives = 56/85 (65%) Frame = +2 Query: 605 VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 784 VT ++P+VL G+PVYR Q GEFV+T PRAYHSGFN G+N AEAVN DWLP G+ Sbjct: 537 VTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGR 596 Query: 785 CAVELYRDQRRKTSISHDRLLLKTA 859 V YR RR SH+ L+ K A Sbjct: 597 QCVNHYRRLRRHCVFSHEELIFKMA 621 Score = 56.6 bits (135), Expect = 3e-07 Identities = 23/57 (40%), Positives = 36/57 (63%) Frame = +3 Query: 1146 DRECFSCFYDLHLSAVSCHCSPNRFACLNHANLLCSCEMDRKFVLHRYSMEELNTLV 1316 +R+C +C LSA++C C+P R CL H LC C M +K + +RY +E+L +L+ Sbjct: 673 ERQCSACRTTCFLSALTCSCNPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLL 729
>Q80Y84:JAD1B_MOUSE Histone demethylase JARID1B - Mus musculus (Mouse)| Length = 1544 Score = 95.1 bits (235), Expect = 6e-19 Identities = 48/88 (54%), Positives = 57/88 (64%) Frame = +2 Query: 605 VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 784 VT ++P+ L + +PVYR Q GEFV+T PRAYHSGFN GFN AEAVN VDWLP G+ Sbjct: 553 VTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGR 612 Query: 785 CAVELYRDQRRKTSISHDRLLLKTAQAA 868 VE YR R SHD ++ K A A Sbjct: 613 QCVEHYRLLHRYCVFSHDEMICKMASKA 640 Score = 55.1 bits (131), Expect = 7e-07 Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 12/132 (9%) Frame = +3 Query: 996 IICQFSLNENKFYLIILAPL---FQIRIKMEGAARETNALLQYKKMG------QDYD--- 1139 +IC+ + + +++ + + I I+ E A RET +K+G D++ Sbjct: 632 MICKMASKADVLDVVVASTVQKDMAIMIEDEKALRET-----VRKLGVIDSERMDFELLP 686 Query: 1140 STDRECFSCFYDLHLSAVSCHCSPNRFACLNHANLLCSCEMDRKFVLHRYSMEELNTLVA 1319 +R+C C +SA+SC C P CL+H LCSC + + +RY++++L ++ Sbjct: 687 DDERQCIKCKTTCFMSAISCSCKPGLLVCLHHVKELCSCPPYKYNLRYRYTLDDLYPMMN 746 Query: 1320 ALEGDPAAVCQW 1355 AL+ + +W Sbjct: 747 ALKLRAESYNEW 758
>Q9UGL1:JAD1B_HUMAN Histone demethylase JARID1B - Homo sapiens (Human)| Length = 1544 Score = 95.1 bits (235), Expect = 6e-19 Identities = 48/88 (54%), Positives = 57/88 (64%) Frame = +2 Query: 605 VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 784 VT ++P+ L + +PVYR Q GEFV+T PRAYHSGFN GFN AEAVN VDWLP G+ Sbjct: 553 VTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGR 612 Query: 785 CAVELYRDQRRKTSISHDRLLLKTAQAA 868 VE YR R SHD ++ K A A Sbjct: 613 QCVEHYRLLHRYCVFSHDEMICKMASKA 640 Score = 55.8 bits (133), Expect = 4e-07 Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 12/149 (8%) Frame = +3 Query: 996 IICQFSLNENKFYLIILAPL---FQIRIKMEGAARETNALLQYKKMG------QDYD--- 1139 +IC+ + + +++ + + I I+ E A RET +K+G D++ Sbjct: 632 MICKMASKADVLDVVVASTVQKDMAIMIEDEKALRET-----VRKLGVIDSERMDFELLP 686 Query: 1140 STDRECFSCFYDLHLSAVSCHCSPNRFACLNHANLLCSCEMDRKFVLHRYSMEELNTLVA 1319 +R+C C +SA+SC C P CL+H LCSC + + +RY++++L ++ Sbjct: 687 DDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPMMN 746 Query: 1320 ALEGDPAAVCQWKEYDVDLACQSVSTQQK 1406 AL+ + +W +V+ A ++ T++K Sbjct: 747 ALKLRAESYNEW-ALNVNEALEAKITKKK 774
>Q5XUN4:JAD1D_PANTR Histone demethylase JARID1D - Pan troglodytes (Chimpanzee)| Length = 1535 Score = 94.7 bits (234), Expect = 8e-19 Identities = 46/85 (54%), Positives = 56/85 (65%) Frame = +2 Query: 605 VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 784 VT ++P+ L S G+PV R Q GEFV+T PRAYHSGFN G+N AEAVN DWLP G+ Sbjct: 558 VTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 617 Query: 785 CAVELYRDQRRKTSISHDRLLLKTA 859 +E YR RR SH+ L+ K A Sbjct: 618 QCIEHYRRLRRYCVFSHEELICKMA 642 Score = 56.2 bits (134), Expect = 3e-07 Identities = 22/61 (36%), Positives = 39/61 (63%) Frame = +3 Query: 1146 DRECFSCFYDLHLSAVSCHCSPNRFACLNHANLLCSCEMDRKFVLHRYSMEELNTLVAAL 1325 +R+C C LSA++C+ P+ CL+H N LC C R+++ +RY+++EL T++ L Sbjct: 694 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPTMLHKL 753 Query: 1326 E 1328 + Sbjct: 754 K 754
>Q9BY66:JAD1D_HUMAN Histone demethylase JARID1D - Homo sapiens (Human)| Length = 1539 Score = 94.7 bits (234), Expect = 8e-19 Identities = 46/85 (54%), Positives = 56/85 (65%) Frame = +2 Query: 605 VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 784 VT ++P+ L S G+PV R Q GEFV+T PRAYHSGFN G+N AEAVN DWLP G+ Sbjct: 558 VTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 617 Query: 785 CAVELYRDQRRKTSISHDRLLLKTA 859 +E YR RR SH+ L+ K A Sbjct: 618 QCIEHYRRLRRYCVFSHEELICKMA 642 Score = 56.2 bits (134), Expect = 3e-07 Identities = 22/61 (36%), Positives = 39/61 (63%) Frame = +3 Query: 1146 DRECFSCFYDLHLSAVSCHCSPNRFACLNHANLLCSCEMDRKFVLHRYSMEELNTLVAAL 1325 +R+C C LSA++C+ P+ CL+H N LC C R+++ +RY+++EL T++ L Sbjct: 694 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPTMLHKL 753 Query: 1326 E 1328 + Sbjct: 754 K 754
>Q30DN6:JAD1D_CANFA Histone demethylase JARID1D - Canis familiaris (Dog)| Length = 1545 Score = 94.7 bits (234), Expect = 8e-19 Identities = 46/85 (54%), Positives = 56/85 (65%) Frame = +2 Query: 605 VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 784 VT ++P+ L S G+PV R Q GEFV+T PRAYHSGFN G+N AEAVN DWLP G+ Sbjct: 561 VTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 620 Query: 785 CAVELYRDQRRKTSISHDRLLLKTA 859 +E YR RR SH+ L+ K A Sbjct: 621 QCIEHYRRLRRYCVFSHEELICKMA 645 Score = 54.3 bits (129), Expect = 1e-06 Identities = 21/61 (34%), Positives = 38/61 (62%) Frame = +3 Query: 1146 DRECFSCFYDLHLSAVSCHCSPNRFACLNHANLLCSCEMDRKFVLHRYSMEELNTLVAAL 1325 +R+C C LSA++C+ P+ CL+H N LC C R+++ +RY+++EL ++ L Sbjct: 697 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 756 Query: 1326 E 1328 + Sbjct: 757 K 757
>A1YVX4:JAD1C_PIG Histone demethylase JARID1C - Sus scrofa (Pig)| Length = 1516 Score = 94.7 bits (234), Expect = 8e-19 Identities = 46/85 (54%), Positives = 56/85 (65%) Frame = +2 Query: 605 VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 784 VT ++P+ L S G+PV R Q GEFV+T PRAYHSGFN G+N AEAVN DWLP G+ Sbjct: 527 VTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 586 Query: 785 CAVELYRDQRRKTSISHDRLLLKTA 859 +E YR RR SH+ L+ K A Sbjct: 587 QCIEHYRRLRRYCVFSHEELICKMA 611 Score = 54.3 bits (129), Expect = 1e-06 Identities = 21/61 (34%), Positives = 38/61 (62%) Frame = +3 Query: 1146 DRECFSCFYDLHLSAVSCHCSPNRFACLNHANLLCSCEMDRKFVLHRYSMEELNTLVAAL 1325 +R+C C LSA++C+ P+ CL+H N LC C R+++ +RY+++EL ++ L Sbjct: 663 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 722 Query: 1326 E 1328 + Sbjct: 723 K 723
>P41230:JAD1C_MOUSE Histone demethylase JARID1C - Mus musculus (Mouse)| Length = 1554 Score = 94.7 bits (234), Expect = 8e-19 Identities = 46/85 (54%), Positives = 56/85 (65%) Frame = +2 Query: 605 VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 784 VT ++P+ L S G+PV R Q GEFV+T PRAYHSGFN G+N AEAVN DWLP G+ Sbjct: 568 VTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 627 Query: 785 CAVELYRDQRRKTSISHDRLLLKTA 859 +E YR RR SH+ L+ K A Sbjct: 628 QCIEHYRRLRRYCVFSHEELICKMA 652 Score = 54.3 bits (129), Expect = 1e-06 Identities = 21/61 (34%), Positives = 38/61 (62%) Frame = +3 Query: 1146 DRECFSCFYDLHLSAVSCHCSPNRFACLNHANLLCSCEMDRKFVLHRYSMEELNTLVAAL 1325 +R+C C LSA++C+ P+ CL+H N LC C R+++ +RY+++EL ++ L Sbjct: 704 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 763 Query: 1326 E 1328 + Sbjct: 764 K 764
>P41229:JAD1C_HUMAN Histone demethylase JARID1C - Homo sapiens (Human)| Length = 1560 Score = 94.7 bits (234), Expect = 8e-19 Identities = 46/85 (54%), Positives = 56/85 (65%) Frame = +2 Query: 605 VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 784 VT ++P+ L S G+PV R Q GEFV+T PRAYHSGFN G+N AEAVN DWLP G+ Sbjct: 568 VTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 627 Query: 785 CAVELYRDQRRKTSISHDRLLLKTA 859 +E YR RR SH+ L+ K A Sbjct: 628 QCIEHYRRLRRYCVFSHEELICKMA 652 Score = 54.3 bits (129), Expect = 1e-06 Identities = 21/61 (34%), Positives = 38/61 (62%) Frame = +3 Query: 1146 DRECFSCFYDLHLSAVSCHCSPNRFACLNHANLLCSCEMDRKFVLHRYSMEELNTLVAAL 1325 +R+C C LSA++C+ P+ CL+H N LC C R+++ +RY+++EL ++ L Sbjct: 704 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 763 Query: 1326 E 1328 + Sbjct: 764 K 764
>Q38JA7:JAD1C_CANFA Histone demethylase JARID1C - Canis familiaris (Dog)| Length = 1556 Score = 94.7 bits (234), Expect = 8e-19 Identities = 46/85 (54%), Positives = 56/85 (65%) Frame = +2 Query: 605 VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 784 VT ++P+ L S G+PV R Q GEFV+T PRAYHSGFN G+N AEAVN DWLP G+ Sbjct: 568 VTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 627 Query: 785 CAVELYRDQRRKTSISHDRLLLKTA 859 +E YR RR SH+ L+ K A Sbjct: 628 QCIEHYRRLRRYCVFSHEELICKMA 652 Score = 54.3 bits (129), Expect = 1e-06 Identities = 21/61 (34%), Positives = 38/61 (62%) Frame = +3 Query: 1146 DRECFSCFYDLHLSAVSCHCSPNRFACLNHANLLCSCEMDRKFVLHRYSMEELNTLVAAL 1325 +R+C C LSA++C+ P+ CL+H N LC C R+++ +RY+++EL ++ L Sbjct: 704 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 763 Query: 1326 E 1328 + Sbjct: 764 K 764
>Q62240:JAD1D_MOUSE Histone demethylase JARID1D - Mus musculus (Mouse)| Length = 1548 Score = 94.4 bits (233), Expect = 1e-18 Identities = 46/85 (54%), Positives = 56/85 (65%) Frame = +2 Query: 605 VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 784 VT ++P+ L S G+PV R Q GEFV+T PRAYHSGFN G+N AEAVN DWLP G+ Sbjct: 567 VTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPVGR 626 Query: 785 CAVELYRDQRRKTSISHDRLLLKTA 859 +E YR RR SH+ L+ K A Sbjct: 627 QCIEHYRRLRRYCVFSHEELICKMA 651 Score = 55.5 bits (132), Expect = 6e-07 Identities = 21/61 (34%), Positives = 39/61 (63%) Frame = +3 Query: 1146 DRECFSCFYDLHLSAVSCHCSPNRFACLNHANLLCSCEMDRKFVLHRYSMEELNTLVAAL 1325 +R+C C LSA++C+ P+ CL+H N LC C +R+++ +RY+++EL ++ L Sbjct: 703 ERQCIKCKTTCFLSALACYDCPDSLVCLSHINDLCKCSRNRQYLRYRYTLDELPAMLQKL 762 Query: 1326 E 1328 + Sbjct: 763 K 763
>Q6IQX0:JAD1B_DANRE Histone demethylase JARID1B - Danio rerio (Zebrafish) (Brachydanio| rerio) Length = 1503 Score = 94.0 bits (232), Expect = 1e-18 Identities = 44/88 (50%), Positives = 57/88 (64%) Frame = +2 Query: 605 VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 784 VT ++P+ L + G+P+YR Q GEFV+T PR+YHSGFN GFN AEAVN VDW+P G+ Sbjct: 539 VTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRSYHSGFNQGFNFAEAVNFCTVDWMPLGR 598 Query: 785 CAVELYRDQRRKTSISHDRLLLKTAQAA 868 V+ YR R SHD ++ A A Sbjct: 599 QCVDHYRQLHRYCVFSHDEMVCNMAMKA 626 Score = 50.4 bits (119), Expect = 2e-05 Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 11/121 (9%) Frame = +3 Query: 996 IICQFSLNENKFYLIILAPL---FQIRIKMEGAARETNA--------LLQYKKMGQDYDS 1142 ++C ++ + +++ + + Q+ IK E RE L QY + D Sbjct: 618 MVCNMAMKADCLDVVLASAVQKDMQLMIKEERELREKVRKMGVAQCELFQYDLLADD--- 674 Query: 1143 TDRECFSCFYDLHLSAVSCHCSPNRFACLNHANLLCSCEMDRKFVLHRYSMEELNTLVAA 1322 +R+C C +LSA++C C P CL H + LCSC + + +R+++++L ++ A Sbjct: 675 -ERQCVKCRTTCYLSALTCPCRPGVQVCLYHTHDLCSCPISNYTLNYRFTLDDLYPMMNA 733 Query: 1323 L 1325 + Sbjct: 734 V 734
>Q9VMJ7:JAD1_DROME Histone demethylase lid - Drosophila melanogaster (Fruit fly)| Length = 1838 Score = 90.9 bits (224), Expect = 1e-17 Identities = 44/85 (51%), Positives = 57/85 (67%) Frame = +2 Query: 605 VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 784 VT ++P++L + +PV+R Q+ GEFV+T PRAYH+GFN G+N AEAVN AP DWL G+ Sbjct: 691 VTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGR 750 Query: 785 CAVELYRDQRRKTSISHDRLLLKTA 859 V Y RR SHD L+ K A Sbjct: 751 ECVNHYSMLRRFCVFSHDELVCKMA 775 Score = 51.6 bits (122), Expect = 8e-06 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 7/127 (5%) Frame = +3 Query: 996 IICQFSLNENKFYL-------IILAPLFQIRIKMEGAARETNALLQYKKMGQDYDSTDRE 1154 ++C+ +L K I +A + K+ + E ++ + + +R Sbjct: 770 LVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERH 829 Query: 1155 CFSCFYDLHLSAVSCHCSPNRFACLNHANLLCSCEMDRKFVLHRYSMEELNTLVAALEGD 1334 C C LSAV+C C+ CL H +LC C ++ +++RY+++E+ ++ L+ Sbjct: 830 CQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVK 889 Query: 1335 PAAVCQW 1355 + +W Sbjct: 890 AHSFERW 896
>Q8VCD7:JHD3C_MOUSE JmjC domain-containing histone demethylation protein 3C - Mus| musculus (Mouse) Length = 1054 Score = 80.5 bits (197), Expect = 2e-14 Identities = 47/112 (41%), Positives = 66/112 (58%), Gaps = 2/112 (1%) Frame = +2 Query: 554 ANVFAPSSIFILNFFVQ--VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCG 727 A F PSS + F++ +T +SPSVLK GIP ++ Q GEF++T P YH+GFN G Sbjct: 225 AQGFFPSSSQGCDAFLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHG 284 Query: 728 FNCAEAVNVAPVDWLPHGQCAVELYRDQRRKTSISHDRLLLKTAQAALRQVW 883 FNCAE+ N A V W+ +G+ A +L + IS D + +K Q Q+W Sbjct: 285 FNCAESTNFATVRWIDYGKVA-KLCTCRNDMVKISMD-IFVKKFQPDRYQIW 334
>Q9H3R0:JHD3C_HUMAN JmjC domain-containing histone demethylation protein 3C - Homo| sapiens (Human) Length = 1056 Score = 79.3 bits (194), Expect = 4e-14 Identities = 46/112 (41%), Positives = 67/112 (59%), Gaps = 2/112 (1%) Frame = +2 Query: 554 ANVFAPSSIFILNFFVQ--VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCG 727 A F PSS + F++ +T +SPSVLK GIP ++ Q GEF++T P YH+GFN G Sbjct: 225 AQGFFPSSSQGCDAFLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHG 284 Query: 728 FNCAEAVNVAPVDWLPHGQCAVELYRDQRRKTSISHDRLLLKTAQAALRQVW 883 FNCAE+ N A V W+ +G+ A +L ++ IS D + ++ Q Q+W Sbjct: 285 FNCAESTNFATVRWIDYGKVA-KLCTCRKDMVKISMD-IFVRKFQPDRYQLW 334
>Q6B0I6:JHD3D_HUMAN JmjC domain-containing histone demethylation protein 3D - Homo| sapiens (Human) Length = 520 Score = 77.4 bits (189), Expect = 1e-13 Identities = 35/74 (47%), Positives = 48/74 (64%) Frame = +2 Query: 602 QVTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHG 781 +V +SP+VLK GIP R+ Q GEF++T P YH+GFN GFNCAEA+N A W+ +G Sbjct: 242 KVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYG 301 Query: 782 QCAVELYRDQRRKT 823 + A + + R T Sbjct: 302 KMASQCSCGEARVT 315
>Q3U2K5:JHD3D_MOUSE JmjC domain-containing histone demethylation protein 3D - Mus| musculus (Mouse) Length = 510 Score = 76.3 bits (186), Expect = 3e-13 Identities = 33/63 (52%), Positives = 44/63 (69%) Frame = +2 Query: 602 QVTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHG 781 +V +SP+VLK GIP R+ Q GEF++T P YH+GFN GFNCAEA+N A W+ +G Sbjct: 242 KVALISPTVLKENGIPFGRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYG 301 Query: 782 QCA 790 + A Sbjct: 302 KVA 304
>Q91VY5:JHD3B_MOUSE JmjC domain-containing histone demethylation protein 3B - Mus| musculus (Mouse) Length = 1086 Score = 75.1 bits (183), Expect = 7e-13 Identities = 31/65 (47%), Positives = 45/65 (69%) Frame = +2 Query: 602 QVTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHG 781 ++T +SP +LK GIP R+ Q GEF++T P YH+GFN GFNCAE+ N A + W+ +G Sbjct: 242 KMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301 Query: 782 QCAVE 796 + A + Sbjct: 302 KVATQ 306
>O94953:JHD3B_HUMAN JmjC domain-containing histone demethylation protein 3B - Homo| sapiens (Human) Length = 1096 Score = 75.1 bits (183), Expect = 7e-13 Identities = 31/65 (47%), Positives = 45/65 (69%) Frame = +2 Query: 602 QVTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHG 781 ++T +SP +LK GIP R+ Q GEF++T P YH+GFN GFNCAE+ N A + W+ +G Sbjct: 242 KMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301 Query: 782 QCAVE 796 + A + Sbjct: 302 KVATQ 306
>Q9V6L0:JHD3B_DROME Probable JmjC domain-containing histone demethylation protein 3B -| Drosophila melanogaster (Fruit fly) Length = 452 Score = 73.9 bits (180), Expect = 2e-12 Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 2/83 (2%) Frame = +2 Query: 554 ANVFAPSSIFILNFFVQ--VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCG 727 AN + P+S N +++ +T +SP +LK +PV ++ Q GE ++T P YH+GFN G Sbjct: 221 ANQYFPASYKNCNAYLRHKMTLISPQILKQHDVPVSKITQEAGEIMITFPFGYHAGFNHG 280 Query: 728 FNCAEAVNVAPVDWLPHGQCAVE 796 FNCAE+ N A W+ +G+ AV+ Sbjct: 281 FNCAESTNFAMERWIEYGKRAVQ 303
>Q9US53:JMJ2_SCHPO Jumonji/ARID domain-containing protein 2 - Schizosaccharomyces| pombe (Fission yeast) Length = 715 Score = 72.4 bits (176), Expect = 4e-12 Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 2/86 (2%) Frame = +2 Query: 608 TQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQC 787 T ++P L+ G+ VY + Q P EFV+T P+++H+G N GFN EAVN AP DWL +G Sbjct: 523 TMINPDELQKRGVDVYFIDQGPNEFVITFPKSFHAGINHGFNINEAVNFAPKDWLLNGFS 582 Query: 788 --AVELYRDQRRKTSISHDRLLLKTA 859 V Y+ + +SHD L+ A Sbjct: 583 LNGVLKYQSLLKPPVLSHDMLVYNLA 608
>Q5RD88:JHD3A_PONPY JmjC domain-containing histone demethylation protein 3A - Pongo| pygmaeus (Orangutan) Length = 1064 Score = 72.0 bits (175), Expect = 6e-12 Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 2/82 (2%) Frame = +2 Query: 554 ANVFAPSSIFILNFFVQ--VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCG 727 A F P S F++ +T +SP +LK GIP +V Q GEF++T P YH+GFN G Sbjct: 223 AKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHG 282 Query: 728 FNCAEAVNVAPVDWLPHGQCAV 793 FNCAE+ N A W+ +G+ AV Sbjct: 283 FNCAESTNFATRRWIEYGKQAV 304
>Q8BW72:JHD3A_MOUSE JmjC domain-containing histone demethylation protein 3A - Mus| musculus (Mouse) Length = 1064 Score = 72.0 bits (175), Expect = 6e-12 Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 2/82 (2%) Frame = +2 Query: 554 ANVFAPSSIFILNFFVQ--VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCG 727 A F P S F++ +T +SP +LK GIP +V Q GEF++T P YH+GFN G Sbjct: 223 AKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHG 282 Query: 728 FNCAEAVNVAPVDWLPHGQCAV 793 FNCAE+ N A W+ +G+ AV Sbjct: 283 FNCAESTNFATRRWIEYGKQAV 304
>O75164:JHD3A_HUMAN JmjC domain-containing histone demethylation protein 3A - Homo| sapiens (Human) Length = 1064 Score = 72.0 bits (175), Expect = 6e-12 Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 2/82 (2%) Frame = +2 Query: 554 ANVFAPSSIFILNFFVQ--VTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCG 727 A F P S F++ +T +SP +LK GIP +V Q GEF++T P YH+GFN G Sbjct: 223 AKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHG 282 Query: 728 FNCAEAVNVAPVDWLPHGQCAV 793 FNCAE+ N A W+ +G+ AV Sbjct: 283 FNCAESTNFATRRWIEYGKQAV 304
>P47156:JAD1_YEAST Histone demethylase YJR119C - Saccharomyces cerevisiae (Baker's| yeast) Length = 728 Score = 69.7 bits (169), Expect = 3e-11 Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 2/69 (2%) Frame = +2 Query: 605 VTQLSP--SVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPH 778 VT +SP K GIPVY+ VQ P E+++T P+ YH+GFN G+N EAVN WLP+ Sbjct: 481 VTLISPYDPNFKKSGIPVYKAVQKPNEYIITFPKCYHAGFNTGYNFNEAVNFTIDFWLPY 540 Query: 779 GQCAVELYR 805 G A+ Y+ Sbjct: 541 GFGAITDYK 549
>Q9U297:JHD2_CAEEL JmjC domain-containing histone demethylation protein 2 -| Caenorhabditis elegans Length = 894 Score = 69.3 bits (168), Expect = 4e-11 Identities = 33/81 (40%), Positives = 47/81 (58%) Frame = +2 Query: 551 YANVFAPSSIFILNFFVQVTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGF 730 Y N +AP L + ++P +L+ GIP +VQ P EF++T PR YH GFN G+ Sbjct: 306 YQNEYAPQCKAFLRHKTYL--VTPELLRQAGIPYATMVQRPNEFIITFPRGYHMGFNLGY 363 Query: 731 NCAEAVNVAPVDWLPHGQCAV 793 N AE+ N A W+ +G+ AV Sbjct: 364 NLAESTNFASQRWIDYGKDAV 384
>Q9V333:JHD3A_DROME Probable JmjC domain-containing histone demethylation protein 3A -| Drosophila melanogaster (Fruit fly) Length = 495 Score = 63.2 bits (152), Expect = 3e-09 Identities = 27/63 (42%), Positives = 40/63 (63%) Frame = +2 Query: 602 QVTQLSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHG 781 ++T +SP VL+ IP ++ Q GE ++T P YH+GFN GFN AE+ N A W+ +G Sbjct: 248 KMTMISPKVLRQHNIPYNKITQEAGEIMITFPFGYHAGFNHGFNGAESTNFASKRWIEYG 307 Query: 782 QCA 790 + A Sbjct: 308 KRA 310
>P39956:RPH1_YEAST DNA damage-responsive transcriptional repressor RPH1 -| Saccharomyces cerevisiae (Baker's yeast) Length = 796 Score = 62.8 bits (151), Expect = 4e-09 Identities = 28/58 (48%), Positives = 39/58 (67%) Frame = +2 Query: 617 SPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQCA 790 SP +L+ GI +V + GEF++T P YH+GFN G+N AE+VN A +WLP G+ A Sbjct: 293 SPKLLQENGIRCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFALEEWLPIGKKA 350
>Q62315:JARD2_MOUSE Protein Jumonji - Mus musculus (Mouse)| Length = 1234 Score = 55.5 bits (132), Expect = 6e-07 Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 1/89 (1%) Frame = +2 Query: 614 LSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHG-QCA 790 +SP VL +GI V+R VQ G+FV+ P ++ S CG+N +E V+ A W G + A Sbjct: 983 ISPEVLCKKGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYNVSETVHFATTQWTSMGFETA 1042 Query: 791 VELYRDQRRKTSISHDRLLLKTAQAALRQ 877 E+ R K S ++LL + AQA ++ Sbjct: 1043 KEMKRRHIAK-PFSMEKLLYQIAQAEAKK 1070
>Q92833:JARD2_HUMAN Protein Jumonji - Homo sapiens (Human)| Length = 1246 Score = 55.1 bits (131), Expect = 7e-07 Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 1/89 (1%) Frame = +2 Query: 614 LSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHG-QCA 790 +SP VL EGI V+R VQ G+FV+ P ++ S CG++ +E V+ A W G + A Sbjct: 985 ISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETA 1044 Query: 791 VELYRDQRRKTSISHDRLLLKTAQAALRQ 877 E+ R K S ++LL + AQA ++ Sbjct: 1045 KEMKRRHIAK-PFSMEKLLYQIAQAEAKK 1072
>Q9HDV4:LID2_SCHPO Lid2 complex component lid2 - Schizosaccharomyces pombe (Fission| yeast) Length = 1513 Score = 53.1 bits (126), Expect = 3e-06 Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 2/81 (2%) Frame = +2 Query: 614 LSPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHG--QC 787 +SPS L G + P EF++ P +YH GF+ GF+ E+VN A V+W+ G Sbjct: 511 VSPSSLIENGFHPIAIDLRPNEFLVVSPNSYHMGFHQGFSSFESVNFATVNWIKDGLLNS 570 Query: 788 AVELYRDQRRKTSISHDRLLL 850 ++ + + R +S+S++ +++ Sbjct: 571 SISVLKSMRIPSSVSYEAVII 591
>Q9UT79:MSC1_SCHPO Multicopy suppressor of chk1 protein 1 - Schizosaccharomyces pombe| (Fission yeast) Length = 1588 Score = 52.0 bits (123), Expect = 6e-06 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 2/81 (2%) Frame = +2 Query: 623 SVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLP--HGQCAVE 796 S+L S GI V VQN EFV+T P Y++ + GF+ +E+V A +W+ H + + Sbjct: 585 SMLISNGIQVLTFVQNSNEFVITSPNTYYTVLDTGFSLSESVPFATKEWIQDMHAENSFN 644 Query: 797 LYRDQRRKTSISHDRLLLKTA 859 +Y++ S D +LL A Sbjct: 645 MYKNLHISAPFSLDHILLANA 665
>Q03833:GIS1_YEAST Transcriptional activator/repressor GIS1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 894 Score = 42.0 bits (97), Expect = 0.006 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = +2 Query: 617 SPSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAV 748 SP L+ I RVVQ EF++T P +SGFN G+N E++ Sbjct: 262 SPDFLRKNNIKFNRVVQFQHEFIITFPYCMYSGFNYGYNFGESI 305
>Q03214:ECM5_YEAST Protein ECM5 - Saccharomyces cerevisiae (Baker's yeast)| Length = 1411 Score = 38.1 bits (87), Expect = 0.094 Identities = 14/51 (27%), Positives = 25/51 (49%) Frame = +2 Query: 620 PSVLKSEGIPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWL 772 P+ + + GI +Y+ Q G ++ P+A+ GF ++ AP WL Sbjct: 634 PNFILANGIKLYKTTQEQGSYIFKFPKAFTCSIGSGFYLSQNAKFAPSSWL 684
>Q6NKX3:FDL14_ARATH F-box/FBD/LRR-repeat protein At2g04230 - Arabidopsis thaliana| (Mouse-ear cress) Length = 448 Score = 33.5 bits (75), Expect = 2.3 Identities = 22/68 (32%), Positives = 27/68 (39%) Frame = +3 Query: 1119 KMGQDYDSTDRECFSCFYDLHLSAVSCHCSPNRFACLNHANLLCSCEMDRKFVLHRYSME 1298 K D D R C L+L V H C NLLC C + V+HRYS Sbjct: 153 KCAIDLDFPSRVCLKSLRKLYLDQV--HFKDEESVC----NLLCGCPSLQDLVVHRYSNA 206 Query: 1299 ELNTLVAA 1322 ++ T A Sbjct: 207 DVATFTIA 214
>Q17RP2:TIGD6_HUMAN Tigger transposable element-derived protein 6 - Homo sapiens (Human)| Length = 521 Score = 32.0 bits (71), Expect = 6.7 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = +3 Query: 1044 LAPLFQIRIKMEGAARETNALLQYKKMGQD-YDSTDRECFSCFYDLHLSAVSCHCSPNRF 1220 L+ + R K E RE + Q K+M YD D+ F+ F ++H + S R Sbjct: 44 LSTFLKDRTKFEEKVREASVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRK 103 Query: 1221 ACLNHANLL 1247 LN AN+L Sbjct: 104 KALNLANML 112 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 265,666,386 Number of extensions: 6028392 Number of successful extensions: 14419 Number of sequences better than 10.0: 40 Number of HSP's gapped: 14406 Number of HSP's successfully gapped: 56 Length of query: 485 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 368 Effective length of database: 68,593,924 Effective search space: 25242564032 Effective search space used: 25242564032 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
