ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf45i18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os07g0204100:Os07g0204100 58 7e-09
2AK070959:Os03g0806600 50 2e-06
3Os02g0604000:Os02g0604000 29 2.6
4Os05g0138700:Os05g0138700 29 3.4
5AK101620:Os12g0152900 29 3.4
6AK100701:Os01g0675000 28 4.4
7Os03g0165100:Os03g0165100 28 4.4
8Os05g0470900:Os05g0470900 27 9.7
9AK107364:Os03g0556500 27 9.7

>Os07g0204100:Os07g0204100 |
          Length = 229
 Score = 57.8 bits (138), Expect = 7e-09
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -2

Query: 309 TSRLNQAMSSMMGAGASTRANISFGGFYDGF 217
           TSRLNQAMSS+MG G STRANISFGG+Y+GF
Sbjct: 199 TSRLNQAMSSVMGGGGSTRANISFGGYYEGF 229



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>AK070959:Os03g0806600 |
          Length = 229

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = -2

Query: 306 SRLNQAMSSMMGAGASTRANISFGGFYDGF 217
           SRLNQA+S++MG GASTRA+ISFGG+YDGF
Sbjct: 201 SRLNQAVSTVMG-GASTRASISFGGYYDGF 229



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>Os02g0604000:Os02g0604000 |
          Length = 406

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = -1

Query: 301 AEPG-HVIYDGGRRVHKGQHIVRWLL-RRLLIHPPAIQLSDQAQA 173
           A+PG +V +DG     +   ++  LL RR L+HPP I  ++ A+A
Sbjct: 362 ADPGRYVSWDGVHLTQRAYGVMAELLFRRGLVHPPPINFTNSARA 406



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>Os05g0138700:Os05g0138700 |
          Length = 253

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
 Frame = -1

Query: 343 GCAENSAGGAADIEAEPGHVIYDG-GRRVHKGQ---------HIVRWLLRRLLIHPP 203
           G      GG  D+ A+ G  + DG GRR    Q         H  R LLR LL HPP
Sbjct: 115 GVEPGRRGGGIDVVADVGEEVDDGVGRRELATQPGDEAVPAVHHHRLLLRLLLHHPP 171



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>AK101620:Os12g0152900 |
          Length = 509

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = -1

Query: 331 NSAGGAADIEAEPGHVIYDGGRR---VHKGQH 245
           N++ GAA  +AE G  + DGGRR   +H G H
Sbjct: 260 NTSAGAAMFDAEYGRWLEDGGRRMAELHGGLH 291



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>AK100701:Os01g0675000 |
          Length = 554

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -3

Query: 233 ASTTASDPPARDSTLGSSTSCWIQLRTSDEEKASSCVIANQQP 105
           +S+ +  PP+  S+ GSS+  W  +  ++E++  + V A   P
Sbjct: 31  SSSPSPPPPSSSSSRGSSSGRWCGVSVAEEDEDDAAVSATTTP 73



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>Os03g0165100:Os03g0165100 |
          Length = 695

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 28/108 (25%), Positives = 40/108 (37%), Gaps = 8/108 (7%)
 Frame = -1

Query: 508 CHRRMVHGLIGPIPTPQSAVFFPDLTAIRFLWN*ILKYYLSKRRLAEVI--------HML 353
           C R +V  L+G  PTPQ  VF  DL         +++ Y   R+  E          H +
Sbjct: 8   CRREIVSSLLGSSPTPQPRVF--DL---------LIRTYTQSRKPREAFEAFRLILDHRV 56

Query: 352 LICGCAENSAGGAADIEAEPGHVIYDGGRRVHKGQHIVRWLLRRLLIH 209
            I   A N+   A      P H+  D  R V      V      +++H
Sbjct: 57  PIPAAASNALLAALSRAGWP-HLAADAYRLVFSSNSEVNTYTLNIMVH 103



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>Os05g0470900:Os05g0470900 |
          Length = 512

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -3

Query: 233 ASTTASDPPARDSTLGSS 180
           ASTTAS PP R  TLG++
Sbjct: 348 ASTTASSPPRRSVTLGNA 365



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>AK107364:Os03g0556500 |
          Length = 97

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 17/61 (27%), Positives = 24/61 (39%)
 Frame = -3

Query: 311 RHRG*TRPCHL*WGQARPQGPTYRSVASTTASDPPARDSTLGSSTSCWIQLRTSDEEKAS 132
           RHR   RP    WG  R +  T    +++ +   P   S   S +SC    RT    +  
Sbjct: 26  RHRRRGRPRTRPWGTTRRRSTTASCRSTSASGSAPTSSSRTASGSSCCRPPRTGSMPRRP 85

Query: 131 S 129
           S
Sbjct: 86  S 86


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 20,321,253
Number of extensions: 458521
Number of successful extensions: 1258
Number of sequences better than 10.0: 9
Number of HSP's gapped: 1257
Number of HSP's successfully gapped: 9
Length of query: 227
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 130
Effective length of database: 11,515,878
Effective search space: 1497064140
Effective search space used: 1497064140
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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