ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf45i18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P87068:ATG8_LACBI Autophagy-related protein 8 precursor - Laccar... 35 0.26
2P01667:KV3AF_MOUSE Ig kappa chain V-III region PC 6308 - Mus mus... 33 1.3
3P01669:KV3AH_MOUSE Ig kappa chain V-III region PC 7769 - Mus mus... 32 1.7
4Q9FKB5:ICK6_ARATH Cyclin-dependent kinase inhibitor 6 - Arabidop... 32 2.2

>P87068:ATG8_LACBI Autophagy-related protein 8 precursor - Laccaria bicolor|
           (Bicoloured deceiver) (Laccaria laccata var. bicolor)
          Length = 184
 Score = 35.0 bits (79), Expect = 0.26
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -3

Query: 170 WIQLRTSDEEKASSCVIANQQPW*WLSCTYNIDHVSCLYIM 48
           W++L   D +KA  CV A ++ W W+ C     + +C+ I+
Sbjct: 120 WVELPVDDMDKAFICVSAAKKHWVWVLCDVRSSYQNCVLIV 160



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>P01667:KV3AF_MOUSE Ig kappa chain V-III region PC 6308 - Mus musculus (Mouse)|
          Length = 111

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
 Frame = -3

Query: 275 WGQARPQGPTYRSV--ASTTASDPPARDSTLGSSTSCWIQLRTSDEEKASS--CVIANQQ 108
           W Q +P  P    +  AS   S  PAR S  GS T   + +   +EE A++  C  +N+ 
Sbjct: 39  WYQQKPGQPPKLLIYTASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSNED 98

Query: 107 PW 102
           PW
Sbjct: 99  PW 100



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>P01669:KV3AH_MOUSE Ig kappa chain V-III region PC 7769 - Mus musculus (Mouse)|
          Length = 111

 Score = 32.3 bits (72), Expect = 1.7
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
 Frame = -3

Query: 275 WGQARPQGPTYRSV--ASTTASDPPARDSTLGSSTSCWIQLRTSDEEKASS--CVIANQQ 108
           W Q +P  P    +  AS   S  PAR S  GS T   + +   +EE A++  C  +N+ 
Sbjct: 39  WYQQKPGQPPKVLIFAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSNED 98

Query: 107 PW 102
           PW
Sbjct: 99  PW 100



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>Q9FKB5:ICK6_ARATH Cyclin-dependent kinase inhibitor 6 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 222

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
 Frame = -3

Query: 269 QARPQGPTYRSVASTTAS----DPPARDSTLGSSTSCWIQLRTSDEEKASSCVIANQQP 105
           +A    P  R+ A+ T +    +  A DS L + +SC++QLR+   EK SS +   Q P
Sbjct: 21  KATAPSPGVRTRAAKTLALKRLNSSAADSALPNDSSCYLQLRSRRLEKPSSLIEPKQPP 79


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 121,790,882
Number of extensions: 2599493
Number of successful extensions: 5819
Number of sequences better than 10.0: 4
Number of HSP's gapped: 5818
Number of HSP's successfully gapped: 4
Length of query: 227
Length of database: 100,686,439
Length adjustment: 109
Effective length of query: 118
Effective length of database: 70,788,284
Effective search space: 8353017512
Effective search space used: 8353017512
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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