| Clone Name | FLbaf42j15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009609.1| Triticum aestivum clone wre1n.pk0101.h1:fis, full insert mRNA sequence Length = 935 Score = 1011 bits (510), Expect = 0.0 Identities = 609/642 (94%) Strand = Plus / Plus Query: 4 gggaatagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcg 63 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152 gggaatagcacatggtcttctttacctgcataagcactcccggttgcttgttatacatcg 211 Query: 64 agatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagattt 123 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 212 agaccttaaaccgagcaatattctcctggacagtgaaatgaatccaaaaatttcagattt 271 Query: 124 cgggctagcaaaaatattcaactcaaatgacaccgaaggaaacattacaagaagagtgat 183 ||| |||||||||||||||| |||||||||||| |||| ||||| ||||||||||||||| Sbjct: 272 cggtctagcaaaaatattcagctcaaatgacactgaagcaaacactacaagaagagtgat 331 Query: 184 tggcacatatggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatc 243 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 332 tggcacatatggctacatggcccctgagtatgcttcaaagggcatcttctctattaaatc 391 Query: 244 cgatgtctttagctttggtgtaatcattttggagattcttagcggaaaacataattctgg 303 ||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 392 cgatgtcttcagctttggtgtaatcattttggagatccttagcggaaaacggaattctgg 451 Query: 304 tcagcaacaatgtggagaattcatcaatctgcttggacatgcatggcaattatgggaaga 363 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 tcagcaagaatgtggagaattcatcaatctgcttggacatgcatggcaattatgggaaga 511 Query: 364 tggaaagtggtttgatctcgttgattcatcatttgttccccatagtcactcggcaaagat 423 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 512 tggaaagtggtttgacctcgttgattcatcatttgttccccatagtcacgcggcaaagat 571 Query: 424 gatgaggtggattaacatagcattgttgtgtgtacaagagaatccagctgatcgaccaac 483 |||| | |||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 572 gatgcgatggattaacatagcattgttgtgtgtacaagagaatgcggctgatcgaccaac 631 Query: 484 aatgggagatgttgtttcaatgctaagcagtgagactatgatcttggatgatcctaagca 543 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 632 catgggagatgttgtttcaatgctaagcagtgagactatgatcttggatgagcctaagca 691 Query: 544 gccaacatatatcaatgtaagagtgggaaatgaagatgagtccactgctccccagtcaga 603 ||| ||||||||||||||||||| ||||||||||||| ||| | ||||||| ||||||| Sbjct: 692 accagcatatatcaatgtaagagttggaaatgaagatgtgtcaagtgctcccgagtcaga 751 Query: 604 tagtactaatgatatgaccatgtctgtcacaactccaagata 645 ||||| ||| |||||||| || |||||||||||||||||||| Sbjct: 752 tagtattaaggatatgacaatatctgtcacaactccaagata 793 Score = 67.9 bits (34), Expect = 6e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 732 tttcaaatgtgagattgtgtaccctaaagagtgtaaagaaggtttccaaa 781 |||||||||||||| |||||| |||||||||| |||||| |||||||||| Sbjct: 884 tttcaaatgtgagactgtgtaacctaaagagtataaagagggtttccaaa 933
>ref|NM_001070661.1| Oryza sativa (japonica cultivar-group) Os10g0136500 (Os10g0136500) mRNA, complete cds Length = 2201 Score = 246 bits (124), Expect = 1e-61 Identities = 226/260 (86%) Strand = Plus / Plus Query: 5 ggaatagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcga 64 |||||||||||||||||||||||||| |||||||||||||| ||| ||| ||||||||| Sbjct: 1350 ggaatagcacatggacttctttacctacataagcactcccgattgagtgtcatacatcga 1409 Query: 65 gatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttc 124 |||||||||||||| || |||||| |||| ||||||||||| || ||||||||||| || Sbjct: 1410 gatcttaaaccgagtaacattctcttggatagcgaaatgaaccctaaaatttcagacttt 1469 Query: 125 gggctagcaaaaatattcaactcaaatgacaccgaaggaaacattacaagaagagtgatt 184 ||| |||||| |||||| | ||||||| |||| |||||||||| |||||||||||| || Sbjct: 1470 gggttagcaagaatatttagctcaaataacacagaaggaaacacaacaagaagagtggtt 1529 Query: 185 ggcacatatggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatcc 244 || ||||| ||||||||||| || ||||||||||| |||| |||||||||| |||||| Sbjct: 1530 ggtacatacggctacatggctccggagtatgcttctgtgggcctcttctctatcaaatcc 1589 Query: 245 gatgtctttagctttggtgt 264 || || || ||||||||||| Sbjct: 1590 gacgtattcagctttggtgt 1609 Score = 141 bits (71), Expect = 5e-30 Identities = 134/155 (86%) Strand = Plus / Plus Query: 425 atgaggtggattaacatagcattgttgtgtgtacaagagaatccagctgatcgaccaaca 484 |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 1776 atgaggtgcattaacatagcattgctgtgtgtacaagagaatgcagctgatcgaccaacc 1835 Query: 485 atgggagatgttgtttcaatgctaagcagtgagactatgatcttggatgatcctaagcag 544 ||| |||||||||| ||||||||||||| |||| ||| || ||| ||| |||||||| Sbjct: 1836 atgtcagatgttgttgcaatgctaagcagcaagacgatggtcctggctgaacctaagcac 1895 Query: 545 ccaacatatatcaatgtaagagtgggaaatgaaga 579 || |||| ||||||| ||||||| ||||||||| Sbjct: 1896 ccgggatatttcaatgtgagagtggcaaatgaaga 1930
>dbj|AK120072.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013006F14, full insert sequence Length = 2203 Score = 246 bits (124), Expect = 1e-61 Identities = 226/260 (86%) Strand = Plus / Plus Query: 5 ggaatagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcga 64 |||||||||||||||||||||||||| |||||||||||||| ||| ||| ||||||||| Sbjct: 1352 ggaatagcacatggacttctttacctacataagcactcccgattgagtgtcatacatcga 1411 Query: 65 gatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttc 124 |||||||||||||| || |||||| |||| ||||||||||| || ||||||||||| || Sbjct: 1412 gatcttaaaccgagtaacattctcttggatagcgaaatgaaccctaaaatttcagacttt 1471 Query: 125 gggctagcaaaaatattcaactcaaatgacaccgaaggaaacattacaagaagagtgatt 184 ||| |||||| |||||| | ||||||| |||| |||||||||| |||||||||||| || Sbjct: 1472 gggttagcaagaatatttagctcaaataacacagaaggaaacacaacaagaagagtggtt 1531 Query: 185 ggcacatatggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatcc 244 || ||||| ||||||||||| || ||||||||||| |||| |||||||||| |||||| Sbjct: 1532 ggtacatacggctacatggctccggagtatgcttctgtgggcctcttctctatcaaatcc 1591 Query: 245 gatgtctttagctttggtgt 264 || || || ||||||||||| Sbjct: 1592 gacgtattcagctttggtgt 1611 Score = 141 bits (71), Expect = 5e-30 Identities = 134/155 (86%) Strand = Plus / Plus Query: 425 atgaggtggattaacatagcattgttgtgtgtacaagagaatccagctgatcgaccaaca 484 |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 1778 atgaggtgcattaacatagcattgctgtgtgtacaagagaatgcagctgatcgaccaacc 1837 Query: 485 atgggagatgttgtttcaatgctaagcagtgagactatgatcttggatgatcctaagcag 544 ||| |||||||||| ||||||||||||| |||| ||| || ||| ||| |||||||| Sbjct: 1838 atgtcagatgttgttgcaatgctaagcagcaagacgatggtcctggctgaacctaagcac 1897 Query: 545 ccaacatatatcaatgtaagagtgggaaatgaaga 579 || |||| ||||||| ||||||| ||||||||| Sbjct: 1898 ccgggatatttcaatgtgagagtggcaaatgaaga 1932
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 190 bits (96), Expect = 6e-45 Identities = 165/188 (87%) Strand = Plus / Plus Query: 5 ggaatagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcga 64 |||||||||||||||||||||||||| |||||||||||||| ||| ||| ||||||||| Sbjct: 2240579 ggaatagcacatggacttctttacctacataagcactcccgattgagtgtcatacatcga 2240638 Query: 65 gatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttc 124 |||||||||||||| || |||||| |||| ||||||||||| || ||||||||||| || Sbjct: 2240639 gatcttaaaccgagtaacattctcttggatagcgaaatgaaccctaaaatttcagacttt 2240698 Query: 125 gggctagcaaaaatattcaactcaaatgacaccgaaggaaacattacaagaagagtgatt 184 ||| |||||| |||||| | ||||||| |||| |||||||||| |||||||||||| || Sbjct: 2240699 gggttagcaagaatatttagctcaaataacacagaaggaaacacaacaagaagagtggtt 2240758 Query: 185 ggcacata 192 || ||||| Sbjct: 2240759 ggtacata 2240766 Score = 145 bits (73), Expect = 3e-31 Identities = 121/137 (88%) Strand = Plus / Minus Query: 5 ggaatagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcga 64 ||||||||||| ||||| ||||| || |||||||||||||| |||| ||| || |||||| Sbjct: 2229215 ggaatagcacaaggactgctttatctacataagcactcccgattgcgtgtgattcatcga 2229156 Query: 65 gatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttc 124 || ||||| || || || |||||| |||||||||||||||| || ||||||||||||||| Sbjct: 2229155 gaccttaagccaagtaacattctcttggacagcgaaatgaaccccaaaatttcagatttc 2229096 Query: 125 gggctagcaaaaatatt 141 ||||||||||||||||| Sbjct: 2229095 gggctagcaaaaatatt 2229079 Score = 141 bits (71), Expect = 5e-30 Identities = 134/155 (86%) Strand = Plus / Plus Query: 425 atgaggtggattaacatagcattgttgtgtgtacaagagaatccagctgatcgaccaaca 484 |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 2241203 atgaggtgcattaacatagcattgctgtgtgtacaagagaatgcagctgatcgaccaacc 2241262 Query: 485 atgggagatgttgtttcaatgctaagcagtgagactatgatcttggatgatcctaagcag 544 ||| |||||||||| ||||||||||||| |||| ||| || ||| ||| |||||||| Sbjct: 2241263 atgtcagatgttgttgcaatgctaagcagcaagacgatggtcctggctgaacctaagcac 2241322 Query: 545 ccaacatatatcaatgtaagagtgggaaatgaaga 579 || |||| ||||||| ||||||| ||||||||| Sbjct: 2241323 ccgggatatttcaatgtgagagtggcaaatgaaga 2241357 Score = 109 bits (55), Expect = 2e-20 Identities = 118/139 (84%) Strand = Plus / Minus Query: 426 tgaggtggattaacatagcattgttgtgtgtacaagagaatccagctgatcgaccaacaa 485 ||||||| |||||||| || ||||||||||||||||||||| ||| ||||||||| || | Sbjct: 2228627 tgaggtgcattaacattgcgttgttgtgtgtacaagagaatgcagttgatcgaccgacca 2228568 Query: 486 tgggagatgttgtttcaatgctaagcagtgagactatgatcttggatgatcctaagcagc 545 || | |||||||| |||||||||| ||||||| |||| || | ||||| |||||||| | Sbjct: 2228567 tgtcaaatgttgttgcaatgctaagtagtgagagtatggtccttgatgagcctaagcatc 2228508 Query: 546 caacatatatcaatgtaag 564 || ||||| || ||||||| Sbjct: 2228507 cagcatatttccatgtaag 2228489 Score = 61.9 bits (31), Expect = 4e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 194 ggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgtcttt 253 ||||||||||| || ||||||||||| |||| |||||||||| |||||||| || || Sbjct: 2240862 ggctacatggctccggagtatgcttctgtgggcctcttctctatcaaatccgacgtattc 2240921 Query: 254 agctttggtgt 264 ||||||||||| Sbjct: 2240922 agctttggtgt 2240932
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 190 bits (96), Expect = 6e-45 Identities = 165/188 (87%) Strand = Plus / Plus Query: 5 ggaatagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcga 64 |||||||||||||||||||||||||| |||||||||||||| ||| ||| ||||||||| Sbjct: 2240579 ggaatagcacatggacttctttacctacataagcactcccgattgagtgtcatacatcga 2240638 Query: 65 gatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttc 124 |||||||||||||| || |||||| |||| ||||||||||| || ||||||||||| || Sbjct: 2240639 gatcttaaaccgagtaacattctcttggatagcgaaatgaaccctaaaatttcagacttt 2240698 Query: 125 gggctagcaaaaatattcaactcaaatgacaccgaaggaaacattacaagaagagtgatt 184 ||| |||||| |||||| | ||||||| |||| |||||||||| |||||||||||| || Sbjct: 2240699 gggttagcaagaatatttagctcaaataacacagaaggaaacacaacaagaagagtggtt 2240758 Query: 185 ggcacata 192 || ||||| Sbjct: 2240759 ggtacata 2240766 Score = 145 bits (73), Expect = 3e-31 Identities = 121/137 (88%) Strand = Plus / Minus Query: 5 ggaatagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcga 64 ||||||||||| ||||| ||||| || |||||||||||||| |||| ||| || |||||| Sbjct: 2229215 ggaatagcacaaggactgctttatctacataagcactcccgattgcgtgtgattcatcga 2229156 Query: 65 gatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttc 124 || ||||| || || || |||||| |||||||||||||||| || ||||||||||||||| Sbjct: 2229155 gaccttaagccaagtaacattctcttggacagcgaaatgaaccccaaaatttcagatttc 2229096 Query: 125 gggctagcaaaaatatt 141 ||||||||||||||||| Sbjct: 2229095 gggctagcaaaaatatt 2229079 Score = 141 bits (71), Expect = 5e-30 Identities = 134/155 (86%) Strand = Plus / Plus Query: 425 atgaggtggattaacatagcattgttgtgtgtacaagagaatccagctgatcgaccaaca 484 |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 2241203 atgaggtgcattaacatagcattgctgtgtgtacaagagaatgcagctgatcgaccaacc 2241262 Query: 485 atgggagatgttgtttcaatgctaagcagtgagactatgatcttggatgatcctaagcag 544 ||| |||||||||| ||||||||||||| |||| ||| || ||| ||| |||||||| Sbjct: 2241263 atgtcagatgttgttgcaatgctaagcagcaagacgatggtcctggctgaacctaagcac 2241322 Query: 545 ccaacatatatcaatgtaagagtgggaaatgaaga 579 || |||| ||||||| ||||||| ||||||||| Sbjct: 2241323 ccgggatatttcaatgtgagagtggcaaatgaaga 2241357 Score = 109 bits (55), Expect = 2e-20 Identities = 118/139 (84%) Strand = Plus / Minus Query: 426 tgaggtggattaacatagcattgttgtgtgtacaagagaatccagctgatcgaccaacaa 485 ||||||| |||||||| || ||||||||||||||||||||| ||| ||||||||| || | Sbjct: 2228627 tgaggtgcattaacattgcgttgttgtgtgtacaagagaatgcagttgatcgaccgacca 2228568 Query: 486 tgggagatgttgtttcaatgctaagcagtgagactatgatcttggatgatcctaagcagc 545 || | |||||||| |||||||||| ||||||| |||| || | ||||| |||||||| | Sbjct: 2228567 tgtcaaatgttgttgcaatgctaagtagtgagagtatggtccttgatgagcctaagcatc 2228508 Query: 546 caacatatatcaatgtaag 564 || ||||| || ||||||| Sbjct: 2228507 cagcatatttccatgtaag 2228489 Score = 61.9 bits (31), Expect = 4e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 194 ggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgtcttt 253 ||||||||||| || ||||||||||| |||| |||||||||| |||||||| || || Sbjct: 2240862 ggctacatggctccggagtatgcttctgtgggcctcttctctatcaaatccgacgtattc 2240921 Query: 254 agctttggtgt 264 ||||||||||| Sbjct: 2240922 agctttggtgt 2240932
>gb|AC074283.3| Oryza sativa chromosome 10 clone OSJNBa0087H07, complete sequence Length = 156654 Score = 190 bits (96), Expect = 6e-45 Identities = 165/188 (87%) Strand = Plus / Plus Query: 5 ggaatagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcga 64 |||||||||||||||||||||||||| |||||||||||||| ||| ||| ||||||||| Sbjct: 66233 ggaatagcacatggacttctttacctacataagcactcccgattgagtgtcatacatcga 66292 Query: 65 gatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttc 124 |||||||||||||| || |||||| |||| ||||||||||| || ||||||||||| || Sbjct: 66293 gatcttaaaccgagtaacattctcttggatagcgaaatgaaccctaaaatttcagacttt 66352 Query: 125 gggctagcaaaaatattcaactcaaatgacaccgaaggaaacattacaagaagagtgatt 184 ||| |||||| |||||| | ||||||| |||| |||||||||| |||||||||||| || Sbjct: 66353 gggttagcaagaatatttagctcaaataacacagaaggaaacacaacaagaagagtggtt 66412 Query: 185 ggcacata 192 || ||||| Sbjct: 66413 ggtacata 66420 Score = 145 bits (73), Expect = 3e-31 Identities = 121/137 (88%) Strand = Plus / Minus Query: 5 ggaatagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcga 64 ||||||||||| ||||| ||||| || |||||||||||||| |||| ||| || |||||| Sbjct: 54869 ggaatagcacaaggactgctttatctacataagcactcccgattgcgtgtgattcatcga 54810 Query: 65 gatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttc 124 || ||||| || || || |||||| |||||||||||||||| || ||||||||||||||| Sbjct: 54809 gaccttaagccaagtaacattctcttggacagcgaaatgaaccccaaaatttcagatttc 54750 Query: 125 gggctagcaaaaatatt 141 ||||||||||||||||| Sbjct: 54749 gggctagcaaaaatatt 54733 Score = 141 bits (71), Expect = 5e-30 Identities = 134/155 (86%) Strand = Plus / Plus Query: 425 atgaggtggattaacatagcattgttgtgtgtacaagagaatccagctgatcgaccaaca 484 |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 66857 atgaggtgcattaacatagcattgctgtgtgtacaagagaatgcagctgatcgaccaacc 66916 Query: 485 atgggagatgttgtttcaatgctaagcagtgagactatgatcttggatgatcctaagcag 544 ||| |||||||||| ||||||||||||| |||| ||| || ||| ||| |||||||| Sbjct: 66917 atgtcagatgttgttgcaatgctaagcagcaagacgatggtcctggctgaacctaagcac 66976 Query: 545 ccaacatatatcaatgtaagagtgggaaatgaaga 579 || |||| ||||||| ||||||| ||||||||| Sbjct: 66977 ccgggatatttcaatgtgagagtggcaaatgaaga 67011 Score = 109 bits (55), Expect = 2e-20 Identities = 118/139 (84%) Strand = Plus / Minus Query: 426 tgaggtggattaacatagcattgttgtgtgtacaagagaatccagctgatcgaccaacaa 485 ||||||| |||||||| || ||||||||||||||||||||| ||| ||||||||| || | Sbjct: 54281 tgaggtgcattaacattgcgttgttgtgtgtacaagagaatgcagttgatcgaccgacca 54222 Query: 486 tgggagatgttgtttcaatgctaagcagtgagactatgatcttggatgatcctaagcagc 545 || | |||||||| |||||||||| ||||||| |||| || | ||||| |||||||| | Sbjct: 54221 tgtcaaatgttgttgcaatgctaagtagtgagagtatggtccttgatgagcctaagcatc 54162 Query: 546 caacatatatcaatgtaag 564 || ||||| || ||||||| Sbjct: 54161 cagcatatttccatgtaag 54143 Score = 61.9 bits (31), Expect = 4e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 194 ggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgtcttt 253 ||||||||||| || ||||||||||| |||| |||||||||| |||||||| || || Sbjct: 66516 ggctacatggctccggagtatgcttctgtgggcctcttctctatcaaatccgacgtattc 66575 Query: 254 agctttggtgt 264 ||||||||||| Sbjct: 66576 agctttggtgt 66586
>ref|NM_001070660.1| Oryza sativa (japonica cultivar-group) Os10g0136400 (Os10g0136400) mRNA, complete cds Length = 1923 Score = 170 bits (86), Expect = 5e-39 Identities = 238/288 (82%), Gaps = 3/288 (1%) Strand = Plus / Plus Query: 5 ggaatagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcga 64 ||||||||||| ||||| ||||| || |||||||||||||| |||| ||| || |||||| Sbjct: 1351 ggaatagcacaaggactgctttatctacataagcactcccgattgcgtgtgattcatcga 1410 Query: 65 gatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttc 124 || ||||| || || || |||||| |||||||||||||||| || ||||||||||||||| Sbjct: 1411 gaccttaagccaagtaacattctcttggacagcgaaatgaaccccaaaatttcagatttc 1470 Query: 125 gggctagcaaaaatattcaactcaaatgacaccgaaggaaacattacaagaagagtgatt 184 ||||||||||||||||| ||||||| || |||||| | ||||||||||||| || Sbjct: 1471 gggctagcaaaaatatttggctcaaatagcaatgaagga---actacaagaagagtggtt 1527 Query: 185 ggcacatatggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatcc 244 || || ||||| |||||||| || |||||| |||| ||||| |||||||| ||||| Sbjct: 1528 gggacctatggttacatggctccagagtattcttccgagggcctcttctctccaaaatct 1587 Query: 245 gatgtctttagctttggtgtaatcattttggagattcttagcggaaaa 292 ||||| || |||||||| || || ||| | ||||| ||||||||||| Sbjct: 1588 gatgtattcagctttggcgttataattctcgagatcattagcggaaaa 1635 Score = 103 bits (52), Expect = 1e-18 Identities = 109/128 (85%) Strand = Plus / Plus Query: 426 tgaggtggattaacatagcattgttgtgtgtacaagagaatccagctgatcgaccaacaa 485 ||||||| |||||||| || ||||||||||||||||||||| ||| ||||||||| || | Sbjct: 1769 tgaggtgcattaacattgcgttgttgtgtgtacaagagaatgcagttgatcgaccgacca 1828 Query: 486 tgggagatgttgtttcaatgctaagcagtgagactatgatcttggatgatcctaagcagc 545 || | |||||||| |||||||||| ||||||| |||| || | ||||| |||||||| | Sbjct: 1829 tgtcaaatgttgttgcaatgctaagtagtgagagtatggtccttgatgagcctaagcatc 1888 Query: 546 caacatat 553 || ||||| Sbjct: 1889 cagcatat 1896 Score = 46.1 bits (23), Expect = 0.21 Identities = 35/39 (89%) Strand = Plus / Plus Query: 311 caatgtggagaattcatcaatctgcttggacatgcatgg 349 ||||||| ||| ||||||||||| |||||| |||||||| Sbjct: 1654 caatgtgaagacttcatcaatctccttggatatgcatgg 1692
>ref|NM_001074758.1| Oryza sativa (japonica cultivar-group) Os11g0601500 (Os11g0601500) mRNA, complete cds Length = 2031 Score = 109 bits (55), Expect = 2e-20 Identities = 207/257 (80%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 8 atagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcgagat 67 |||||||||||||||||||| |||| || || || ||| ||| || |||||| ||||| Sbjct: 1474 atagcacatggacttctttatttgcacaaacattctcggctgcgagtcatacatagagat 1533 Query: 68 cttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttcggg 127 |||||| | ||||| |||||||| ||| | ||||||||||| ||||||||||| || ||| Sbjct: 1534 cttaaagcaagcaacattctcctagactgtgaaatgaatcctaaaatttcagactttggg 1593 Query: 128 ctagcaaaaatattcaactcaaatgacaccgaaggaaacattacaagaagagtgattggc 187 || || | |||||||| ||| ||||| | |||| |||| |||| ||| | | || Sbjct: 1594 cttgcgagaatattcagctcgaatgataaagaagaaaac---acaaaaaggattgtcggg 1650 Query: 188 acatatggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgat 247 |||||||| || ||||| ||||||||||||||| |||| ||||||| |||||||| ||| Sbjct: 1651 acatatggttatatggctcctgagtatgcttcggagggactcttctcaattaaatctgat 1710 Query: 248 gtctttagctttggtgt 264 || || ||||| ||||| Sbjct: 1711 gtattcagcttcggtgt 1727 Score = 61.9 bits (31), Expect = 4e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 422 atgatgaggtggattaacatagcattgttgtgtgtacaagagaatccagctgatcgacca 481 |||||||| || |||||||| |||||| ||||||| ||||||||| | ||||| || || Sbjct: 1807 atgatgagatgcattaacattgcattgctgtgtgttcaagagaatgcggctgaccggccc 1866 Query: 482 acaatgggagatgttgtttcaatgctaagcagtgagactatga 524 |||||| |||||| ||| ||||||||||| |||| ||||| Sbjct: 1867 acaatgtcagatgtggttgtgatgctaagcagcgagaatatga 1909
>gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0082P17, complete sequence Length = 157539 Score = 91.7 bits (46), Expect = 4e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 8 atagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcgagat 67 |||||||| |||||||| || |||||||||| || ||||||| ||| ||||| ||||| Sbjct: 107441 atagcacaaggacttctgtatttgcataagcattctcggttgcgtgtcatacacagagat 107382 Query: 68 cttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttcggg 127 || ||| | ||||||||||| ||||| | |||||||| || |||||| ||||||| ||| Sbjct: 107381 ctcaaagcaggcaatattctcttggaccgtgaaatgaaccctaaaattgcagattttggg 107322 Query: 128 ctagcaaaaatatt 141 || ||||||||||| Sbjct: 107321 cttgcaaaaatatt 107308 Score = 42.1 bits (21), Expect = 3.3 Identities = 84/105 (80%) Strand = Plus / Minus Query: 420 agatgatgaggtggattaacatagcattgttgtgtgtacaagagaatccagctgatcgac 479 |||| ||||| || |||||||| || ||| | ||||| ||||||||| | || ||||| | Sbjct: 106772 agataatgagatgtattaacattgctttgctttgtgtgcaagagaatgcggccgatcggc 106713 Query: 480 caacaatgggagatgttgtttcaatgctaagcagtgagactatga 524 | || | | ||| |||||| |||||||||||| |||||||||| Sbjct: 106712 ccaccacgtcagaggttgttgcaatgctaagcaacgagactatga 106668
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 91.7 bits (46), Expect = 4e-15 Identities = 121/146 (82%) Strand = Plus / Minus Query: 8 atagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcgagat 67 |||||||||||||||||||| |||| || || || ||| ||| || |||||| ||||| Sbjct: 72969 atagcacatggacttctttatttgcacaaacattctcggctgcgagtcatacatagagat 72910 Query: 68 cttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttcggg 127 |||||| | ||||| |||||||| ||| | ||||||||||| ||||||||||| || ||| Sbjct: 72909 cttaaagcaagcaacattctcctagactgtgaaatgaatcctaaaatttcagactttggg 72850 Query: 128 ctagcaaaaatattcaactcaaatga 153 || || | |||||||| ||| ||||| Sbjct: 72849 cttgcgagaatattcagctcgaatga 72824 Score = 65.9 bits (33), Expect = 2e-07 Identities = 87/105 (82%) Strand = Plus / Minus Query: 420 agatgatgaggtggattaacatagcattgttgtgtgtacaagagaatccagctgatcgac 479 |||||||||| || |||||||| |||||| ||||||| ||||||||| | ||||| || | Sbjct: 72366 agatgatgagatgcattaacattgcattgctgtgtgttcaagagaatgcggctgaccggc 72307 Query: 480 caacaatgggagatgttgtttcaatgctaagcagtgagactatga 524 | |||||| |||||| ||| ||||||||||| |||| ||||| Sbjct: 72306 ccacaatgtcagatgtggttgtgatgctaagcagcgagaatatga 72262 Score = 58.0 bits (29), Expect = 6e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 200 atggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgtctttagcttt 259 ||||| ||||||||||||||| |||| ||||||| |||||||| ||||| || ||||| Sbjct: 72674 atggctcctgagtatgcttcggagggactcttctcaattaaatctgatgtattcagcttc 72615 Query: 260 ggtgt 264 ||||| Sbjct: 72614 ggtgt 72610
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 91.7 bits (46), Expect = 4e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 8 atagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcgagat 67 |||||||||||||||||||| |||| || || || ||| ||| || |||||| ||||| Sbjct: 22268329 atagcacatggacttctttatttgcacaaacattctcggctgcgagtcatacatagagat 22268388 Query: 68 cttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttcggg 127 |||||| | ||||| |||||||| ||| | ||||||||||| ||||||||||| || ||| Sbjct: 22268389 cttaaagcaagcaacattctcctagactgtgaaatgaatcctaaaatttcagactttggg 22268448 Query: 128 ctagcaaaaatattcaactcaaatga 153 || || | |||||||| ||| ||||| Sbjct: 22268449 cttgcgagaatattcagctcgaatga 22268474 Score = 83.8 bits (42), Expect = 1e-12 Identities = 112/134 (83%), Gaps = 1/134 (0%) Strand = Plus / Minus Query: 8 atagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcgagat 67 |||||||| |||||||| || |||||||||| || ||||||| ||| ||||| ||||| Sbjct: 26697295 atagcacaaggacttctgtat-tgcataagcattctcggttgcgtgtcatacacagagat 26697237 Query: 68 cttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttcggg 127 || ||| | ||||||||||| ||||| | |||||||| || |||||| ||||||| ||| Sbjct: 26697236 ctcaaagcaggcaatattctcttggaccgtgaaatgaaccctaaaattgcagattttggg 26697177 Query: 128 ctagcaaaaatatt 141 || ||||||||||| Sbjct: 26697176 cttgcaaaaatatt 26697163 Score = 65.9 bits (33), Expect = 2e-07 Identities = 87/105 (82%) Strand = Plus / Plus Query: 420 agatgatgaggtggattaacatagcattgttgtgtgtacaagagaatccagctgatcgac 479 |||||||||| || |||||||| |||||| ||||||| ||||||||| | ||||| || | Sbjct: 22268932 agatgatgagatgcattaacattgcattgctgtgtgttcaagagaatgcggctgaccggc 22268991 Query: 480 caacaatgggagatgttgtttcaatgctaagcagtgagactatga 524 | |||||| |||||| ||| ||||||||||| |||| ||||| Sbjct: 22268992 ccacaatgtcagatgtggttgtgatgctaagcagcgagaatatga 22269036 Score = 58.0 bits (29), Expect = 6e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 200 atggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgtctttagcttt 259 ||||| ||||||||||||||| |||| ||||||| |||||||| ||||| || ||||| Sbjct: 22268624 atggctcctgagtatgcttcggagggactcttctcaattaaatctgatgtattcagcttc 22268683 Query: 260 ggtgt 264 ||||| Sbjct: 22268684 ggtgt 22268688 Score = 42.1 bits (21), Expect = 3.3 Identities = 84/105 (80%) Strand = Plus / Minus Query: 420 agatgatgaggtggattaacatagcattgttgtgtgtacaagagaatccagctgatcgac 479 |||| ||||| || |||||||| || ||| | ||||| ||||||||| | || ||||| | Sbjct: 26696627 agataatgagatgtattaacattgctttgctttgtgtgcaagagaatgcggccgatcggc 26696568 Query: 480 caacaatgggagatgttgtttcaatgctaagcagtgagactatga 524 | || | | ||| |||||| |||||||||||| |||||||||| Sbjct: 26696567 ccaccacgtcagaggttgttgcaatgctaagcaacgagactatga 26696523
>ref|NM_001049792.1| Oryza sativa (japonica cultivar-group) Os01g0535400 (Os01g0535400) mRNA, complete cds Length = 3490 Score = 79.8 bits (40), Expect = 2e-11 Identities = 192/242 (79%), Gaps = 3/242 (1%) Strand = Plus / Plus Query: 8 atagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcgagat 67 |||||||| ||||| || ||||| || ||||||||||| |||| || | |||| ||||| Sbjct: 2442 atagcacaaggactcctgtacctacacaagcactcccgtttgcgcgtcacacatagagat 2501 Query: 68 cttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttcggg 127 || ||| | || ||| ||||| |||| | |||||||| |||||||||||||| ||| Sbjct: 2502 ctgaaagcaagtaatgttctcttggatcataatatgaatcctaaaatttcagattttggg 2561 Query: 128 ctagcaaaaatattcaactcaaatgacaccgaaggaaacattacaagaagagtgattggc 187 ||||| |||||||||| ||| ||||| | ||||||||| |||| ||| ||| || Sbjct: 2562 ctagctaaaatattcagctctaatgatattgaaggaaac---acaaaaagggtggcgggt 2618 Query: 188 acatatggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgat 247 ||||| || |||||||| |||||||||||||| |||| ||||||| | ||||||||| Sbjct: 2619 acatacggttacatggctcctgagtatgcttctgagggtctcttctcggtcaaatccgat 2678 Query: 248 gt 249 || Sbjct: 2679 gt 2680 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 437 aacatagcattgttgtgtgtacaagagaatccagctgatcgaccaacaatgggagatgtt 496 ||||| |||||| | |||||||| |||||| | ||||||||||| || ||| |||||| Sbjct: 2874 aacatcgcattgctatgtgtacaggagaatgcggctgatcgacctaccatgtcagatgtc 2933 Query: 497 gtttcaatgctaagcagtga 516 || |||||||||||||||| Sbjct: 2934 gtggcaatgctaagcagtga 2953
>dbj|AK065803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036D01, full insert sequence Length = 3491 Score = 79.8 bits (40), Expect = 2e-11 Identities = 192/242 (79%), Gaps = 3/242 (1%) Strand = Plus / Plus Query: 8 atagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcgagat 67 |||||||| ||||| || ||||| || ||||||||||| |||| || | |||| ||||| Sbjct: 2443 atagcacaaggactcctgtacctacacaagcactcccgtttgcgcgtcacacatagagat 2502 Query: 68 cttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttcggg 127 || ||| | || ||| ||||| |||| | |||||||| |||||||||||||| ||| Sbjct: 2503 ctgaaagcaagtaatgttctcttggatcataatatgaatcctaaaatttcagattttggg 2562 Query: 128 ctagcaaaaatattcaactcaaatgacaccgaaggaaacattacaagaagagtgattggc 187 ||||| |||||||||| ||| ||||| | ||||||||| |||| ||| ||| || Sbjct: 2563 ctagctaaaatattcagctctaatgatattgaaggaaac---acaaaaagggtggcgggt 2619 Query: 188 acatatggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgat 247 ||||| || |||||||| |||||||||||||| |||| ||||||| | ||||||||| Sbjct: 2620 acatacggttacatggctcctgagtatgcttctgagggtctcttctcggtcaaatccgat 2679 Query: 248 gt 249 || Sbjct: 2680 gt 2681 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 437 aacatagcattgttgtgtgtacaagagaatccagctgatcgaccaacaatgggagatgtt 496 ||||| |||||| | |||||||| |||||| | ||||||||||| || ||| |||||| Sbjct: 2875 aacatcgcattgctatgtgtacaggagaatgcggctgatcgacctaccatgtcagatgtc 2934 Query: 497 gtttcaatgctaagcagtga 516 || |||||||||||||||| Sbjct: 2935 gtggcaatgctaagcagtga 2954
>dbj|AK243250.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100047P11, full insert sequence Length = 2186 Score = 77.8 bits (39), Expect = 6e-11 Identities = 126/155 (81%) Strand = Plus / Plus Query: 8 atagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcgagat 67 |||||||| |||||||| || ||||||||||||| ||||||| | | || ||| ||||| Sbjct: 1464 atagcacaaggacttctatatttgcataagcactctcggttgcgtatcattcatagagat 1523 Query: 68 cttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttcggg 127 || ||| | |||| ||||| ||||| |||||||| || |||||||||||||| ||| Sbjct: 1524 ctcaaagcaggcaacattctattggaccatgaaatgaaccctaaaatttcagattttggg 1583 Query: 128 ctagcaaaaatattcaactcaaatgacaccgaagg 162 || ||||||||||| | | ||||||| || ||||| Sbjct: 1584 cttgcaaaaatatttagcacaaatgatactgaagg 1618
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 77.8 bits (39), Expect = 6e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 8 atagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcgagat 67 |||||||| |||||||| || ||||||||||||| ||||||| | | || ||| ||||| Sbjct: 20253342 atagcacaaggacttctatatttgcataagcactctcggttgcgtatcattcatagagat 20253283 Query: 68 cttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttcggg 127 || ||| | |||| ||||| ||||| |||||||| || |||||||||||||| ||| Sbjct: 20253282 ctcaaagcaggcaacattctattggaccatgaaatgaaccctaaaatttcagattttggg 20253223 Query: 128 ctagcaaaaatattcaactcaaatgacaccgaagg 162 || ||||||||||| | | ||||||| || ||||| Sbjct: 20253222 cttgcaaaaatatttagcacaaatgatactgaagg 20253188 Score = 71.9 bits (36), Expect = 4e-09 Identities = 129/160 (80%) Strand = Plus / Minus Query: 8 atagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcgagat 67 |||||||| ||||| || ||||| || ||||||||||| |||| || | |||| ||||| Sbjct: 19451486 atagcacaaggactcctgtacctacacaagcactcccgtttgcgcgtcacacatagagat 19451427 Query: 68 cttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttcggg 127 || ||| | || ||| ||||| |||| | |||||||| |||||||||||||| ||| Sbjct: 19451426 ctgaaagcaagtaatgttctcttggatcataatatgaatcctaaaatttcagattttggg 19451367 Query: 128 ctagcaaaaatattcaactcaaatgacaccgaaggaaaca 167 ||||| |||||||||| ||| ||||| | |||||||||| Sbjct: 19451366 ctagctaaaatattcagctctaatgatattgaaggaaaca 19451327 Score = 63.9 bits (32), Expect = 9e-07 Identities = 119/148 (80%) Strand = Plus / Plus Query: 20 cttctttacctgcataagcactcccggttgcttgttatacatcgagatcttaaaccgagc 79 ||||||||| |||| |||||||| ||| | | ||| ||||| |||| |||||| | ||| Sbjct: 14949830 cttctttacttgcacaagcactctcggctccgtgtcatacacagagaccttaaagccagc 14949889 Query: 80 aatattctcctggacagcgaaatgaatccaaaaatttcagatttcgggctagcaaaaata 139 || ||||| ||||| || |||||||| ||||| || ||||| |||||||||||||| Sbjct: 14949890 aacattcttttggaccaggacatgaatcctaaaatatctgattttgggctagcaaaaatt 14949949 Query: 140 ttcaactcaaatgacaccgaaggaaaca 167 || | ||| ||| | ||||||||||||| Sbjct: 14949950 tttagctctaataataccgaaggaaaca 14949977 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 437 aacatagcattgttgtgtgtacaagagaatccagctgatcgaccaacaatgggagatgtt 496 ||||| |||||| | |||||||| |||||| | ||||||||||| || ||| |||||| Sbjct: 19450880 aacatcgcattgctatgtgtacaggagaatgcggctgatcgacctaccatgtcagatgtc 19450821 Query: 497 gtttcaatgctaagcagtga 516 || |||||||||||||||| Sbjct: 19450820 gtggcaatgctaagcagtga 19450801 Score = 48.1 bits (24), Expect = 0.054 Identities = 60/72 (83%) Strand = Plus / Plus Query: 193 tggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgtctt 252 |||||||||| |||| |||||||| | | ||| | ||||| || ||||||||||||| Sbjct: 33224492 tggctacatgtccccggagtatgcaatggacggcgtgttctccatgaaatccgatgtcta 33224551 Query: 253 tagctttggtgt 264 |||||||||||| Sbjct: 33224552 tagctttggtgt 33224563 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Plus Query: 98 gaaatgaatccaaaaatttcagattt 123 ||||||||||| |||||||||||||| Sbjct: 13473070 gaaatgaatcccaaaatttcagattt 13473095 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Plus Query: 239 aaatccgatgtctttagctttggtgt 264 ||||||||||||| |||||||||||| Sbjct: 41090756 aaatccgatgtctatagctttggtgt 41090781 Score = 42.1 bits (21), Expect = 3.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 197 tacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgt 249 |||||||| |||||||||||||| |||| ||||||| | ||||||||||| Sbjct: 19451205 tacatggctcctgagtatgcttctgagggtctcttctcggtcaaatccgatgt 19451153
>dbj|AP004232.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0051H17 Length = 187471 Score = 77.8 bits (39), Expect = 6e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 8 atagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcgagat 67 |||||||| |||||||| || ||||||||||||| ||||||| | | || ||| ||||| Sbjct: 159720 atagcacaaggacttctatatttgcataagcactctcggttgcgtatcattcatagagat 159661 Query: 68 cttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttcggg 127 || ||| | |||| ||||| ||||| |||||||| || |||||||||||||| ||| Sbjct: 159660 ctcaaagcaggcaacattctattggaccatgaaatgaaccctaaaatttcagattttggg 159601 Query: 128 ctagcaaaaatattcaactcaaatgacaccgaagg 162 || ||||||||||| | | ||||||| || ||||| Sbjct: 159600 cttgcaaaaatatttagcacaaatgatactgaagg 159566
>dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0026J14 Length = 163496 Score = 77.8 bits (39), Expect = 6e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 8 atagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcgagat 67 |||||||| |||||||| || ||||||||||||| ||||||| | | || ||| ||||| Sbjct: 19375 atagcacaaggacttctatatttgcataagcactctcggttgcgtatcattcatagagat 19316 Query: 68 cttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttcggg 127 || ||| | |||| ||||| ||||| |||||||| || |||||||||||||| ||| Sbjct: 19315 ctcaaagcaggcaacattctattggaccatgaaatgaaccctaaaatttcagattttggg 19256 Query: 128 ctagcaaaaatattcaactcaaatgacaccgaagg 162 || ||||||||||| | | ||||||| || ||||| Sbjct: 19255 cttgcaaaaatatttagcacaaatgatactgaagg 19221
>dbj|AP003449.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086A10 Length = 151071 Score = 71.9 bits (36), Expect = 4e-09 Identities = 129/160 (80%) Strand = Plus / Minus Query: 8 atagcacatggacttctttacctgcataagcactcccggttgcttgttatacatcgagat 67 |||||||| ||||| || ||||| || ||||||||||| |||| || | |||| ||||| Sbjct: 60302 atagcacaaggactcctgtacctacacaagcactcccgtttgcgcgtcacacatagagat 60243 Query: 68 cttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatttcggg 127 || ||| | || ||| ||||| |||| | |||||||| |||||||||||||| ||| Sbjct: 60242 ctgaaagcaagtaatgttctcttggatcataatatgaatcctaaaatttcagattttggg 60183 Query: 128 ctagcaaaaatattcaactcaaatgacaccgaaggaaaca 167 ||||| |||||||||| ||| ||||| | |||||||||| Sbjct: 60182 ctagctaaaatattcagctctaatgatattgaaggaaaca 60143 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 437 aacatagcattgttgtgtgtacaagagaatccagctgatcgaccaacaatgggagatgtt 496 ||||| |||||| | |||||||| |||||| | ||||||||||| || ||| |||||| Sbjct: 59696 aacatcgcattgctatgtgtacaggagaatgcggctgatcgacctaccatgtcagatgtc 59637 Query: 497 gtttcaatgctaagcagtga 516 || |||||||||||||||| Sbjct: 59636 gtggcaatgctaagcagtga 59617 Score = 42.1 bits (21), Expect = 3.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 197 tacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgt 249 |||||||| |||||||||||||| |||| ||||||| | ||||||||||| Sbjct: 60021 tacatggctcctgagtatgcttctgagggtctcttctcggtcaaatccgatgt 59969
>ref|NM_001049574.1| Oryza sativa (japonica cultivar-group) Os01g0366300 (Os01g0366300) mRNA, complete cds Length = 2602 Score = 69.9 bits (35), Expect = 1e-08 Identities = 193/245 (78%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 20 cttctttacctgcataagcactcccggttgcttgttatacatcgagatcttaaaccgagc 79 ||||||||| |||| |||||||| ||| | | ||| ||||| |||| |||||| | ||| Sbjct: 1466 cttctttacttgcacaagcactctcggctccgtgtcatacacagagaccttaaagccagc 1525 Query: 80 aatattctcctggacagcgaaatgaatccaaaaatttcagatttcgggctagcaaaaata 139 || ||||| ||||| || |||||||| ||||| || ||||| |||||||||||||| Sbjct: 1526 aacattcttttggaccaggacatgaatcctaaaatatctgattttgggctagcaaaaatt 1585 Query: 140 ttcaactcaaatgacaccgaaggaaacattacaagaagagtgattggcacatatggctac 199 || | ||| ||| | |||||||||||| |||| || ||| | || |||||||| ||| Sbjct: 1586 tttagctctaataataccgaaggaaac---acaaagagggtggtgggaacatatggttac 1642 Query: 200 atggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgtctttagcttt 259 ||| | || |||||||| || | || |||| ||| || ||||| ||||| ||||||||| Sbjct: 1643 atgtcaccagagtatgcctctgaaggtatctactcgatcaaatctgatgtgtttagcttt 1702 Query: 260 ggtgt 264 ||||| Sbjct: 1703 ggtgt 1707
>dbj|AK064115.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-A04, full insert sequence Length = 2602 Score = 69.9 bits (35), Expect = 1e-08 Identities = 193/245 (78%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 20 cttctttacctgcataagcactcccggttgcttgttatacatcgagatcttaaaccgagc 79 ||||||||| |||| |||||||| ||| | | ||| ||||| |||| |||||| | ||| Sbjct: 1466 cttctttacttgcacaagcactctcggctccgtgtcatacacagagaccttaaagccagc 1525 Query: 80 aatattctcctggacagcgaaatgaatccaaaaatttcagatttcgggctagcaaaaata 139 || ||||| ||||| || |||||||| ||||| || ||||| |||||||||||||| Sbjct: 1526 aacattcttttggaccaggacatgaatcctaaaatatctgattttgggctagcaaaaatt 1585 Query: 140 ttcaactcaaatgacaccgaaggaaacattacaagaagagtgattggcacatatggctac 199 || | ||| ||| | |||||||||||| |||| || ||| | || |||||||| ||| Sbjct: 1586 tttagctctaataataccgaaggaaac---acaaagagggtggtgggaacatatggttac 1642 Query: 200 atggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgtctttagcttt 259 ||| | || |||||||| || | || |||| ||| || ||||| ||||| ||||||||| Sbjct: 1643 atgtcaccagagtatgcctctgaaggtatctactcgatcaaatctgatgtgtttagcttt 1702 Query: 260 ggtgt 264 ||||| Sbjct: 1703 ggtgt 1707
>ref|NM_001070399.1| Oryza sativa (japonica cultivar-group) Os09g0551000 (Os09g0551000) mRNA, complete cds Length = 9099 Score = 67.9 bits (34), Expect = 6e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 183 ttggcacatatggctacatggcccctgagtatgcttcgaagggcatcttctctattaaat 242 |||| ||||||||||||||||| ||||||||||| | | || |||||||||| ||||| Sbjct: 1916 ttggaacatatggctacatggctcctgagtatgcaatggaaggtatcttctctactaaat 1975 Query: 243 ccgatgtctttagctttggtgt 264 | ||||||| ||||||||||| Sbjct: 1976 cagatgtctacagctttggtgt 1997 Score = 67.9 bits (34), Expect = 6e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 183 ttggcacatatggctacatggcccctgagtatgcttcgaagggcatcttctctattaaat 242 |||| |||||||| |||||||| ||||||||||| | | || ||||| |||| ||||| Sbjct: 4067 ttggaacatatggttacatggctcctgagtatgcaatggaaggtatcttttctactaaat 4126 Query: 243 ccgatgtctttagctttggtgt 264 ||||||||| |||||||||||| Sbjct: 4127 ccgatgtctatagctttggtgt 4148 Score = 61.9 bits (31), Expect = 4e-06 Identities = 72/83 (86%), Gaps = 2/83 (2%) Strand = Plus / Plus Query: 183 ttggcacatatggctacatggcccctgagtatgct-tcgaagggcatcttctctattaaa 241 |||| |||||||| || ||||| ||||||||||| | ||||| |||||||||| |||| Sbjct: 6365 ttggaacatatggttatatggctcctgagtatgcaattgaaggt-atcttctctactaaa 6423 Query: 242 tccgatgtctttagctttggtgt 264 |||||||||| |||||||||||| Sbjct: 6424 tccgatgtctatagctttggtgt 6446
>gb|AC174147.7| Medicago truncatula clone mth2-75g18, complete sequence Length = 128747 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 59 catcgagatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttca 118 ||||||||||| ||| | ||||| |||| |||||||| ||||||||||||||||| ||| Sbjct: 88360 catcgagatctgaaagccagcaacgttcttctggacagtgaaatgaatccaaaaatatca 88301 Query: 119 gattt 123 ||||| Sbjct: 88300 gattt 88296 Score = 46.1 bits (23), Expect = 0.21 Identities = 35/39 (89%) Strand = Plus / Minus Query: 449 ttgtgtgtacaagagaatccagctgatcgaccaacaatg 487 |||||||||||||| || |||| ||||||||||||||| Sbjct: 87593 ttgtgtgtacaagaagatgcagcagatcgaccaacaatg 87555 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Minus Query: 98 gaaatgaatccaaaaatttcagattt 123 ||||||||||||||||| |||||||| Sbjct: 69490 gaaatgaatccaaaaatatcagattt 69465
>gb|AC144476.11| Medicago truncatula clone mth2-10a6, complete sequence Length = 119355 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 59 catcgagatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttca 118 ||||||||||| ||| | ||||| |||| |||||||| ||||||||||||||||| ||| Sbjct: 47794 catcgagatctgaaagccagcaacgttcttctggacagtgaaatgaatccaaaaatatca 47735 Query: 119 gattt 123 ||||| Sbjct: 47734 gattt 47730 Score = 50.1 bits (25), Expect = 0.014 Identities = 34/37 (91%) Strand = Plus / Minus Query: 98 gaaatgaatccaaaaatttcagatttcgggctagcaa 134 ||||||||||||||||| |||||||| ||| |||||| Sbjct: 89608 gaaatgaatccaaaaatatcagattttgggttagcaa 89572 Score = 46.1 bits (23), Expect = 0.21 Identities = 35/39 (89%) Strand = Plus / Minus Query: 449 ttgtgtgtacaagagaatccagctgatcgaccaacaatg 487 |||||||||||||| || |||| ||||||||||||||| Sbjct: 47027 ttgtgtgtacaagaagatgcagcagatcgaccaacaatg 46989 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Minus Query: 98 gaaatgaatccaaaaatttcagattt 123 ||||||||||||||||| |||||||| Sbjct: 28924 gaaatgaatccaaaaatatcagattt 28899
>gb|AC147431.19| Medicago truncatula clone mth2-88g17, complete sequence Length = 145905 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 59 catcgagatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttca 118 ||||||||||| ||| | ||||| |||| |||||||| ||||||||||||||||| ||| Sbjct: 27675 catcgagatctgaaagccagcaacgttcttctggacagtgaaatgaatccaaaaatatca 27616 Query: 119 gattt 123 ||||| Sbjct: 27615 gattt 27611 Score = 50.1 bits (25), Expect = 0.014 Identities = 34/37 (91%) Strand = Plus / Minus Query: 98 gaaatgaatccaaaaatttcagatttcgggctagcaa 134 ||||||||||||||||| |||||||| ||| |||||| Sbjct: 69483 gaaatgaatccaaaaatatcagattttgggttagcaa 69447 Score = 46.1 bits (23), Expect = 0.21 Identities = 35/39 (89%) Strand = Plus / Minus Query: 449 ttgtgtgtacaagagaatccagctgatcgaccaacaatg 487 |||||||||||||| || |||| ||||||||||||||| Sbjct: 26908 ttgtgtgtacaagaagatgcagcagatcgaccaacaatg 26870 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Minus Query: 98 gaaatgaatccaaaaatttcagattt 123 ||||||||||||||||| |||||||| Sbjct: 8805 gaaatgaatccaaaaatatcagattt 8780 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Minus Query: 98 gaaatgaatccaaaaatttcagattt 123 ||||||||||||||||| |||||||| Sbjct: 104932 gaaatgaatccaaaaatatcagattt 104907 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Minus Query: 98 gaaatgaatccaaaaatttcagattt 123 ||||||||||||||||| |||||||| Sbjct: 110464 gaaatgaatccaaaaatatcagattt 110439 Score = 42.1 bits (21), Expect = 3.3 Identities = 51/61 (83%) Strand = Plus / Minus Query: 63 gagatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatt 122 ||||||| ||| |||||||| |||| ||||| ||||||||||||||||| || |||| Sbjct: 118349 gagatctgaaagcgagcaatgttcttctggatgatgaaatgaatccaaaaatatctgatt 118290 Query: 123 t 123 | Sbjct: 118289 t 118289
>dbj|AP003856.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0697D09 Length = 158479 Score = 63.9 bits (32), Expect = 9e-07 Identities = 119/148 (80%) Strand = Plus / Plus Query: 20 cttctttacctgcataagcactcccggttgcttgttatacatcgagatcttaaaccgagc 79 ||||||||| |||| |||||||| ||| | | ||| ||||| |||| |||||| | ||| Sbjct: 134656 cttctttacttgcacaagcactctcggctccgtgtcatacacagagaccttaaagccagc 134715 Query: 80 aatattctcctggacagcgaaatgaatccaaaaatttcagatttcgggctagcaaaaata 139 || ||||| ||||| || |||||||| ||||| || ||||| |||||||||||||| Sbjct: 134716 aacattcttttggaccaggacatgaatcctaaaatatctgattttgggctagcaaaaatt 134775 Query: 140 ttcaactcaaatgacaccgaaggaaaca 167 || | ||| ||| | ||||||||||||| Sbjct: 134776 tttagctctaataataccgaaggaaaca 134803
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 227 atcttctctattaaatccgatgtctttagctttggtgt 264 |||||||||| |||||||||||||| |||||||||||| Sbjct: 21501716 atcttctctactaaatccgatgtctatagctttggtgt 21501679 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 197 tacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgtctttagc 256 |||||||| ||||||||||| | | || ||||| |||| |||||||||||||| |||| Sbjct: 21506355 tacatggctcctgagtatgcaatggaaggtatcttttctactaaatccgatgtctatagc 21506296 Query: 257 tttggtgt 264 |||||||| Sbjct: 21506295 tttggtgt 21506288 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 193 tggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgtctt 252 |||||||||||| ||||||||||| | | || |||||||||| |||||| ||||||| Sbjct: 21516481 tggctacatggctcctgagtatgcaatggaaggtatcttctctactaaatcagatgtcta 21516422 Query: 253 tagctttggtgt 264 ||||||||||| Sbjct: 21516421 cagctttggtgt 21516410 Score = 48.1 bits (24), Expect = 0.054 Identities = 60/72 (83%) Strand = Plus / Minus Query: 193 tggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgtctt 252 |||||||||||| ||||| |||||| | || ||||| ||||| || |||||||||| Sbjct: 21470376 tggctacatggctcctgaatatgctatgggaggtatcttttctatgaagtccgatgtcta 21470317 Query: 253 tagctttggtgt 264 |||||||||||| Sbjct: 21470316 tagctttggtgt 21470305
>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0489D11 Length = 150757 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 227 atcttctctattaaatccgatgtctttagctttggtgt 264 |||||||||| |||||||||||||| |||||||||||| Sbjct: 63326 atcttctctactaaatccgatgtctatagctttggtgt 63289 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 197 tacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgtctttagc 256 |||||||| ||||||||||| | | || ||||| |||| |||||||||||||| |||| Sbjct: 67965 tacatggctcctgagtatgcaatggaaggtatcttttctactaaatccgatgtctatagc 67906 Query: 257 tttggtgt 264 |||||||| Sbjct: 67905 tttggtgt 67898 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 193 tggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgtctt 252 |||||||||||| ||||||||||| | | || |||||||||| |||||| ||||||| Sbjct: 78091 tggctacatggctcctgagtatgcaatggaaggtatcttctctactaaatcagatgtcta 78032 Query: 253 tagctttggtgt 264 ||||||||||| Sbjct: 78031 cagctttggtgt 78020 Score = 48.1 bits (24), Expect = 0.054 Identities = 60/72 (83%) Strand = Plus / Minus Query: 193 tggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgtctt 252 |||||||||||| ||||| |||||| | || ||||| ||||| || |||||||||| Sbjct: 31986 tggctacatggctcctgaatatgctatgggaggtatcttttctatgaagtccgatgtcta 31927 Query: 253 tagctttggtgt 264 |||||||||||| Sbjct: 31926 tagctttggtgt 31915
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1210_A07 Length = 131394 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 227 atcttctctattaaatccgatgtctttagctttggtgt 264 |||||||||| |||||||||||||| |||||||||||| Sbjct: 118821 atcttctctactaaatccgatgtctatagctttggtgt 118784 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 197 tacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgtctttagc 256 |||||||| ||||||||||| | | || ||||| |||| |||||||||||||| |||| Sbjct: 123460 tacatggctcctgagtatgcaatggaaggtatcttttctactaaatccgatgtctatagc 123401 Query: 257 tttggtgt 264 |||||||| Sbjct: 123400 tttggtgt 123393 Score = 48.1 bits (24), Expect = 0.054 Identities = 60/72 (83%) Strand = Plus / Minus Query: 193 tggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgtctt 252 |||||||||||| ||||| |||||| | || ||||| ||||| || |||||||||| Sbjct: 87481 tggctacatggctcctgaatatgctatgggaggtatcttttctatgaagtccgatgtcta 87422 Query: 253 tagctttggtgt 264 |||||||||||| Sbjct: 87421 tagctttggtgt 87410
>ref|NM_001050995.1| Oryza sativa (japonica cultivar-group) Os01g0784200 (Os01g0784200) mRNA, complete cds Length = 2571 Score = 58.0 bits (29), Expect = 6e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 188 acatatggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgat 247 ||||||||||||||| |||| |||||||| | | ||| | ||||| || ||||||||| Sbjct: 2119 acatatggctacatgtccccggagtatgcaatggacggcgtgttctccatgaaatccgat 2178 Query: 248 gtctttagctttggtgt 264 |||| |||||||||||| Sbjct: 2179 gtctatagctttggtgt 2195
>dbj|AB015872.1| Vitis vinifera gene for chalcone synthase, complete cds Length = 2439 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 84 ttctcctggacagcgaaatgaatccaaaaatttcagattt 123 ||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 2181 ttctcctcgacagtgaaatgaacccaaaaatttcagattt 2220
>ref|NM_001066399.1| Oryza sativa (japonica cultivar-group) Os07g0534500 (Os07g0534500) mRNA, partial cds Length = 2076 Score = 54.0 bits (27), Expect = 9e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 77 agcaatattctcctggacagcgaaatgaatccaaaaatttcagattt 123 |||||||||||| ||||||| || |||| |||||||||||| ||||| Sbjct: 1310 agcaatattctcttggacagtgacatgactccaaaaatttcggattt 1356
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 54.0 bits (27), Expect = 9e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 77 agcaatattctcctggacagcgaaatgaatccaaaaatttcagattt 123 |||||||||||| ||||||| || |||| |||||||||||| ||||| Sbjct: 20907541 agcaatattctcttggacagtgacatgactccaaaaatttcggattt 20907587 Score = 50.1 bits (25), Expect = 0.014 Identities = 40/45 (88%) Strand = Plus / Plus Query: 83 attctcctggacagcgaaatgaatccaaaaatttcagatttcggg 127 |||||| |||| ||||| |||| |||||||||||| ||||||||| Sbjct: 7401338 attctcttggatagcgatatgactccaaaaatttccgatttcggg 7401382 Score = 48.1 bits (24), Expect = 0.054 Identities = 84/104 (80%) Strand = Plus / Plus Query: 20 cttctttacctgcataagcactcccggttgcttgttatacatcgagatcttaaaccgagc 79 |||||||||||||| |||||||| ||||||| ||||| || | ||||| ||| | ||| Sbjct: 20921308 cttctttacctgcacaagcactctcggttgcgagttattcacagggatctgaaagcaagc 20921367 Query: 80 aatattctcctggacagcgaaatgaatccaaaaatttcagattt 123 ||||| ||||| ||| | || ||||| || ||||| || ||||| Sbjct: 20921368 aatatactcctcgaccgggagatgaaccccaaaatctcggattt 20921411
>dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0039D04 Length = 184408 Score = 54.0 bits (27), Expect = 9e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 77 agcaatattctcctggacagcgaaatgaatccaaaaatttcagattt 123 |||||||||||| ||||||| || |||| |||||||||||| ||||| Sbjct: 118331 agcaatattctcttggacagtgacatgactccaaaaatttcggattt 118377 Score = 48.1 bits (24), Expect = 0.054 Identities = 84/104 (80%) Strand = Plus / Plus Query: 20 cttctttacctgcataagcactcccggttgcttgttatacatcgagatcttaaaccgagc 79 |||||||||||||| |||||||| ||||||| ||||| || | ||||| ||| | ||| Sbjct: 132098 cttctttacctgcacaagcactctcggttgcgagttattcacagggatctgaaagcaagc 132157 Query: 80 aatattctcctggacagcgaaatgaatccaaaaatttcagattt 123 ||||| ||||| ||| | || ||||| || ||||| || ||||| Sbjct: 132158 aatatactcctcgaccgggagatgaaccccaaaatctcggattt 132201
>dbj|AP003811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1131_E05 Length = 122216 Score = 54.0 bits (27), Expect = 9e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 77 agcaatattctcctggacagcgaaatgaatccaaaaatttcagattt 123 |||||||||||| ||||||| || |||| |||||||||||| ||||| Sbjct: 35456 agcaatattctcttggacagtgacatgactccaaaaatttcggattt 35502 Score = 48.1 bits (24), Expect = 0.054 Identities = 84/104 (80%) Strand = Plus / Plus Query: 20 cttctttacctgcataagcactcccggttgcttgttatacatcgagatcttaaaccgagc 79 |||||||||||||| |||||||| ||||||| ||||| || | ||||| ||| | ||| Sbjct: 49223 cttctttacctgcacaagcactctcggttgcgagttattcacagggatctgaaagcaagc 49282 Query: 80 aatattctcctggacagcgaaatgaatccaaaaatttcagattt 123 ||||| ||||| ||| | || ||||| || ||||| || ||||| Sbjct: 49283 aatatactcctcgaccgggagatgaaccccaaaatctcggattt 49326
>dbj|AK072564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134B04, full insert sequence Length = 2077 Score = 54.0 bits (27), Expect = 9e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 77 agcaatattctcctggacagcgaaatgaatccaaaaatttcagattt 123 |||||||||||| ||||||| || |||| |||||||||||| ||||| Sbjct: 1311 agcaatattctcttggacagtgacatgactccaaaaatttcggattt 1357
>gb|AC084452.1|AC084452 Caenorhabditis briggsae cosmid CB024D21, complete sequence Length = 93590 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Plus Query: 270 ttttggagattcttagcggaaaacat 295 |||||||||||||||||||||||||| Sbjct: 75208 ttttggagattcttagcggaaaacat 75233
>ref|NM_001067668.1| Oryza sativa (japonica cultivar-group) Os08g0179000 (Os08g0179000) mRNA, complete cds Length = 4055 Score = 50.1 bits (25), Expect = 0.014 Identities = 37/41 (90%) Strand = Plus / Plus Query: 176 agagtgattggcacatatggctacatggcccctgagtatgc 216 |||||| |||| ||||||||||||||||| ||||| ||||| Sbjct: 3397 agagtggttggaacatatggctacatggcgcctgaatatgc 3437
>dbj|AP005774.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0086N05 Length = 163670 Score = 50.1 bits (25), Expect = 0.014 Identities = 40/45 (88%) Strand = Plus / Plus Query: 83 attctcctggacagcgaaatgaatccaaaaatttcagatttcggg 127 |||||| |||| ||||| |||| |||||||||||| ||||||||| Sbjct: 128019 attctcttggatagcgatatgactccaaaaatttccgatttcggg 128063
>dbj|AK122092.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124E22, full insert sequence Length = 4056 Score = 50.1 bits (25), Expect = 0.014 Identities = 37/41 (90%) Strand = Plus / Plus Query: 176 agagtgattggcacatatggctacatggcccctgagtatgc 216 |||||| |||| ||||||||||||||||| ||||| ||||| Sbjct: 3398 agagtggttggaacatatggctacatggcgcctgaatatgc 3438
>ref|NM_001066400.1| Oryza sativa (japonica cultivar-group) Os07g0534700 (Os07g0534700) mRNA, complete cds Length = 2282 Score = 48.1 bits (24), Expect = 0.054 Identities = 84/104 (80%) Strand = Plus / Plus Query: 20 cttctttacctgcataagcactcccggttgcttgttatacatcgagatcttaaaccgagc 79 |||||||||||||| |||||||| ||||||| ||||| || | ||||| ||| | ||| Sbjct: 1472 cttctttacctgcacaagcactctcggttgcgagttattcacagggatctgaaagcaagc 1531 Query: 80 aatattctcctggacagcgaaatgaatccaaaaatttcagattt 123 ||||| ||||| ||| | || ||||| || ||||| || ||||| Sbjct: 1532 aatatactcctcgaccgggagatgaaccccaaaatctcggattt 1575 Score = 48.1 bits (24), Expect = 0.054 Identities = 66/80 (82%) Strand = Plus / Plus Query: 185 ggcacatatggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatcc 244 |||||| |||| ||||| || |||||||||||||| |||| ||||||| || |||||| Sbjct: 1634 ggcacacatggttacatcgctcctgagtatgcttctgagggtctcttctcgatcaaatcc 1693 Query: 245 gatgtctttagctttggtgt 264 || || || ||||| ||||| Sbjct: 1694 gacgtgttcagcttcggtgt 1713
>emb|CU024879.5| M.truncatula DNA sequence from clone MTH2-70F3 on chromosome 3, complete sequence Length = 66861 Score = 48.1 bits (24), Expect = 0.054 Identities = 57/68 (83%) Strand = Plus / Plus Query: 56 atacatcgagatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatt 115 |||||||||||||| ||||| || |||||| | | |||| || |||||||||||||| Sbjct: 50476 atacatcgagatctaaaaccaagtaatattttattagacaatgatatgaatccaaaaata 50535 Query: 116 tcagattt 123 |||||||| Sbjct: 50536 tcagattt 50543
>emb|CR962125.2| Medicago truncatula chromosome 5 clone mth2-179a9, COMPLETE SEQUENCE Length = 113972 Score = 48.1 bits (24), Expect = 0.054 Identities = 30/32 (93%) Strand = Plus / Plus Query: 230 ttctctattaaatccgatgtctttagctttgg 261 |||||||||||||| ||||| ||||||||||| Sbjct: 113706 ttctctattaaatcagatgtatttagctttgg 113737 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Plus Query: 98 gaaatgaatccaaaaatttcagattt 123 |||||| ||||||||||||||||||| Sbjct: 113504 gaaatggatccaaaaatttcagattt 113529
>gb|AC146866.6| Medicago truncatula clone mth2-19a14, complete sequence Length = 145002 Score = 48.1 bits (24), Expect = 0.054 Identities = 30/32 (93%) Strand = Plus / Plus Query: 230 ttctctattaaatccgatgtctttagctttgg 261 |||||||||||||| ||||| ||||||||||| Sbjct: 15853 ttctctattaaatcagatgtatttagctttgg 15884 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Plus Query: 98 gaaatgaatccaaaaatttcagattt 123 |||||| ||||||||||||||||||| Sbjct: 15651 gaaatggatccaaaaatttcagattt 15676
>emb|AJ580824.1|LCO580824 Lotus corniculatus var. japonicus har1 gene and genes for transcription factor homolog BTF3-like protein, S-receptor kinase-like protein 1, S-receptor kinase-like protein 2, S-receptor kinase-like protein 3 and SAR DNA-binding protein-like protein Length = 46304 Score = 48.1 bits (24), Expect = 0.054 Identities = 33/36 (91%) Strand = Plus / Plus Query: 233 tctattaaatccgatgtctttagctttggtgtaatc 268 ||||| ||||| ||||| |||||||||||||||||| Sbjct: 24969 tctatcaaatctgatgtttttagctttggtgtaatc 25004
>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1070A12 Length = 148449 Score = 48.1 bits (24), Expect = 0.054 Identities = 60/72 (83%) Strand = Plus / Plus Query: 193 tggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatccgatgtctt 252 |||||||||| |||| |||||||| | | ||| | ||||| || ||||||||||||| Sbjct: 17739 tggctacatgtccccggagtatgcaatggacggcgtgttctccatgaaatccgatgtcta 17798 Query: 253 tagctttggtgt 264 |||||||||||| Sbjct: 17799 tagctttggtgt 17810
>dbj|AP005667.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09E01, TM0258c, complete sequence Length = 38809 Score = 48.1 bits (24), Expect = 0.054 Identities = 33/36 (91%) Strand = Plus / Plus Query: 233 tctattaaatccgatgtctttagctttggtgtaatc 268 ||||| ||||| ||||| |||||||||||||||||| Sbjct: 26776 tctatcaaatctgatgtttttagctttggtgtaatc 26811
>dbj|AK060565.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-H08, full insert sequence Length = 2283 Score = 48.1 bits (24), Expect = 0.054 Identities = 84/104 (80%) Strand = Plus / Plus Query: 20 cttctttacctgcataagcactcccggttgcttgttatacatcgagatcttaaaccgagc 79 |||||||||||||| |||||||| ||||||| ||||| || | ||||| ||| | ||| Sbjct: 1473 cttctttacctgcacaagcactctcggttgcgagttattcacagggatctgaaagcaagc 1532 Query: 80 aatattctcctggacagcgaaatgaatccaaaaatttcagattt 123 ||||| ||||| ||| | || ||||| || ||||| || ||||| Sbjct: 1533 aatatactcctcgaccgggagatgaaccccaaaatctcggattt 1576 Score = 48.1 bits (24), Expect = 0.054 Identities = 66/80 (82%) Strand = Plus / Plus Query: 185 ggcacatatggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatcc 244 |||||| |||| ||||| || |||||||||||||| |||| ||||||| || |||||| Sbjct: 1635 ggcacacatggttacatcgctcctgagtatgcttctgagggtctcttctcgatcaaatcc 1694 Query: 245 gatgtctttagctttggtgt 264 || || || ||||| ||||| Sbjct: 1695 gacgtgttcagcttcggtgt 1714
>dbj|AB092809.1| Lotus japonicus HAR1 gene for LRR receptor-like kinase, hypothetical proteins, complete and partial cds, clone:BAC259.12D-2 Length = 39462 Score = 48.1 bits (24), Expect = 0.054 Identities = 33/36 (91%) Strand = Plus / Plus Query: 233 tctattaaatccgatgtctttagctttggtgtaatc 268 ||||| ||||| ||||| |||||||||||||||||| Sbjct: 26658 tctatcaaatctgatgtttttagctttggtgtaatc 26693
>ref|NM_001050993.1| Oryza sativa (japonica cultivar-group) Os01g0783900 (Os01g0783900) mRNA, complete cds Length = 1929 Score = 46.1 bits (23), Expect = 0.21 Identities = 65/79 (82%) Strand = Plus / Plus Query: 183 ttggcacatatggctacatggcccctgagtatgcttcgaagggcatcttctctattaaat 242 |||| |||||||| |||||||| || ||||||||| | | ||||| ||||| |||| | Sbjct: 1163 ttggaacatatggatacatggctccggagtatgctatggaaggcattttctcggttaagt 1222 Query: 243 ccgatgtctttagctttgg 261 | ||||| ||||||||||| Sbjct: 1223 ctgatgtgtttagctttgg 1241
>ref|NM_001050992.1| Oryza sativa (japonica cultivar-group) Os01g0783800 (Os01g0783800) mRNA, complete cds Length = 3447 Score = 46.1 bits (23), Expect = 0.21 Identities = 65/79 (82%) Strand = Plus / Plus Query: 183 ttggcacatatggctacatggcccctgagtatgcttcgaagggcatcttctctattaaat 242 |||| |||||||| |||||||| ||||||||||| | | ||||| ||||| |||| | Sbjct: 2869 ttgggacatatggttacatggctcctgagtatgccatgcaaggcattttctcggttaagt 2928 Query: 243 ccgatgtctttagctttgg 261 | ||||| ||||||||||| Sbjct: 2929 ctgatgtgtttagctttgg 2947
>ref|NM_104819.1| Arabidopsis thaliana ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase/ sugar bi> (AT1G61380) mRNA, complete cds Length = 2743 Score = 46.1 bits (23), Expect = 0.21 Identities = 41/47 (87%) Strand = Plus / Plus Query: 77 agcaatattctcctggacagcgaaatgaatccaaaaatttcagattt 123 ||||||||||| |||||| | ||||||||||||||| |||||||| Sbjct: 1969 agcaatattcttctggacgacagaatgaatccaaaaatatcagattt 2015
>ref|NM_001035945.1| Arabidopsis thaliana ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase/ sugar bi> (AT1G11280) mRNA, complete cds Length = 2663 Score = 46.1 bits (23), Expect = 0.21 Identities = 59/71 (83%) Strand = Plus / Plus Query: 56 atacatcgagatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatt 115 |||||||||||||| || ||||| |||||| ||||| | ||||||| |||||||| Sbjct: 1957 atacatcgagatctgaaggtcagcaacattctcttggacgacaaaatgaacccaaaaata 2016 Query: 116 tcagatttcgg 126 ||||||||||| Sbjct: 2017 tcagatttcgg 2027
>ref|NM_101001.2| Arabidopsis thaliana ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase/ sugar bi> (AT1G11280) mRNA, complete cds Length = 2699 Score = 46.1 bits (23), Expect = 0.21 Identities = 59/71 (83%) Strand = Plus / Plus Query: 56 atacatcgagatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatt 115 |||||||||||||| || ||||| |||||| ||||| | ||||||| |||||||| Sbjct: 1993 atacatcgagatctgaaggtcagcaacattctcttggacgacaaaatgaacccaaaaata 2052 Query: 116 tcagatttcgg 126 ||||||||||| Sbjct: 2053 tcagatttcgg 2063
>ref|NM_179306.2| Arabidopsis thaliana ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase/ sugar bi> (AT1G11280) mRNA, complete cds Length = 2804 Score = 46.1 bits (23), Expect = 0.21 Identities = 59/71 (83%) Strand = Plus / Plus Query: 56 atacatcgagatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatt 115 |||||||||||||| || ||||| |||||| ||||| | ||||||| |||||||| Sbjct: 2098 atacatcgagatctgaaggtcagcaacattctcttggacgacaaaatgaacccaaaaata 2157 Query: 116 tcagatttcgg 126 ||||||||||| Sbjct: 2158 tcagatttcgg 2168
>ref|NM_179305.2| Arabidopsis thaliana ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase/ sugar bi> (AT1G11280) mRNA, complete cds Length = 2840 Score = 46.1 bits (23), Expect = 0.21 Identities = 59/71 (83%) Strand = Plus / Plus Query: 56 atacatcgagatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatt 115 |||||||||||||| || ||||| |||||| ||||| | ||||||| |||||||| Sbjct: 2134 atacatcgagatctgaaggtcagcaacattctcttggacgacaaaatgaacccaaaaata 2193 Query: 116 tcagatttcgg 126 ||||||||||| Sbjct: 2194 tcagatttcgg 2204
>gb|AC007259.4| Arabidopsis thaliana chromosome I BAC T28P6 genomic sequence, complete sequence Length = 97146 Score = 46.1 bits (23), Expect = 0.21 Identities = 59/71 (83%) Strand = Plus / Plus Query: 56 atacatcgagatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatt 115 |||||||||||||| || ||||| |||||| ||||| | ||||||| |||||||| Sbjct: 29877 atacatcgagatctgaaggtcagcaacattctcttggacgacaaaatgaacccaaaaata 29936 Query: 116 tcagatttcgg 126 ||||||||||| Sbjct: 29937 tcagatttcgg 29947 Score = 44.1 bits (22), Expect = 0.84 Identities = 43/50 (86%) Strand = Plus / Plus Query: 77 agcaatattctcctggacagcgaaatgaatccaaaaatttcagatttcgg 126 |||||||| || || ||||| ||||||| ||||| |||||||||||||| Sbjct: 3231 agcaatatacttcttgacagtgaaatgatcccaaagatttcagatttcgg 3280
>gb|BT000638.1| Arabidopsis thaliana unknown protein (At1g61380/T1F9_13) mRNA, complete cds Length = 2418 Score = 46.1 bits (23), Expect = 0.21 Identities = 41/47 (87%) Strand = Plus / Plus Query: 77 agcaatattctcctggacagcgaaatgaatccaaaaatttcagattt 123 ||||||||||| |||||| | ||||||||||||||| |||||||| Sbjct: 1849 agcaatattcttctggacgacagaatgaatccaaaaatatcagattt 1895
>gb|AY056250.1| Arabidopsis thaliana putative serine/threonine kinase (At1g11280) mRNA, complete cds Length = 2656 Score = 46.1 bits (23), Expect = 0.21 Identities = 59/71 (83%) Strand = Plus / Plus Query: 56 atacatcgagatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatt 115 |||||||||||||| || ||||| |||||| ||||| | ||||||| |||||||| Sbjct: 1993 atacatcgagatctgaaggtcagcaacattctcttggacgacaaaatgaacccaaaaata 2052 Query: 116 tcagatttcgg 126 ||||||||||| Sbjct: 2053 tcagatttcgg 2063
>gb|AY090241.1| Arabidopsis thaliana At1g61380/T1F9_13 mRNA, complete cds Length = 2634 Score = 46.1 bits (23), Expect = 0.21 Identities = 41/47 (87%) Strand = Plus / Plus Query: 77 agcaatattctcctggacagcgaaatgaatccaaaaatttcagattt 123 ||||||||||| |||||| | ||||||||||||||| |||||||| Sbjct: 1965 agcaatattcttctggacgacagaatgaatccaaaaatatcagattt 2011
>gb|AY062482.1| Arabidopsis thaliana Very similar to receptor protein kinases (At1g11280; T28P6.7) mRNA, complete cds Length = 2665 Score = 46.1 bits (23), Expect = 0.21 Identities = 59/71 (83%) Strand = Plus / Plus Query: 56 atacatcgagatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatt 115 |||||||||||||| || ||||| |||||| ||||| | ||||||| |||||||| Sbjct: 1960 atacatcgagatctgaaggtcagcaacattctcttggacgacaaaatgaacccaaaaata 2019 Query: 116 tcagatttcgg 126 ||||||||||| Sbjct: 2020 tcagatttcgg 2030
>emb|AL161532.2|ATCHRIV32 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 32 Length = 198788 Score = 46.1 bits (23), Expect = 0.21 Identities = 44/51 (86%) Strand = Plus / Plus Query: 230 ttctctattaaatccgatgtctttagctttggtgtaatcattttggagatt 280 ||||| || ||||| ||||||| ||||||||||||||| ||| | |||||| Sbjct: 34143 ttctccatgaaatctgatgtctatagctttggtgtaatgattctagagatt 34193
>emb|AL050399.1|ATF25E4 Arabidopsis thaliana DNA chromosome 4, BAC clone F25E4 (ESSA project) Length = 80019 Score = 46.1 bits (23), Expect = 0.21 Identities = 44/51 (86%) Strand = Plus / Plus Query: 230 ttctctattaaatccgatgtctttagctttggtgtaatcattttggagatt 280 ||||| || ||||| ||||||| ||||||||||||||| ||| | |||||| Sbjct: 55494 ttctccatgaaatctgatgtctatagctttggtgtaatgattctagagatt 55544
>gb|AC004255.1|AC004255 Arabidopsis thaliana BAC T1F9 chromosome 1, complete sequence Length = 97789 Score = 46.1 bits (23), Expect = 0.21 Identities = 41/47 (87%) Strand = Plus / Plus Query: 77 agcaatattctcctggacagcgaaatgaatccaaaaatttcagattt 123 ||||||||||| |||||| | ||||||||||||||| |||||||| Sbjct: 45417 agcaatattcttctggacgacagaatgaatccaaaaatatcagattt 45463
>dbj|AK111632.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116G01, full insert sequence Length = 3450 Score = 46.1 bits (23), Expect = 0.21 Identities = 65/79 (82%) Strand = Plus / Plus Query: 183 ttggcacatatggctacatggcccctgagtatgcttcgaagggcatcttctctattaaat 242 |||| |||||||| |||||||| ||||||||||| | | ||||| ||||| |||| | Sbjct: 2870 ttgggacatatggttacatggctcctgagtatgccatgcaaggcattttctcggttaagt 2929 Query: 243 ccgatgtctttagctttgg 261 | ||||| ||||||||||| Sbjct: 2930 ctgatgtgtttagctttgg 2948
>emb|BX816055.1|CNS0AE0B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH25ZE10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2890 Score = 46.1 bits (23), Expect = 0.21 Identities = 59/71 (83%) Strand = Plus / Plus Query: 56 atacatcgagatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatt 115 |||||||||||||| || ||||| |||||| ||||| | ||||||| |||||||| Sbjct: 2220 atacatcgagatctgaaggtcagcaacattctcttggacgacaaaatgaacccaaaaata 2279 Query: 116 tcagatttcgg 126 ||||||||||| Sbjct: 2280 tcagatttcgg 2290
>emb|BX813645.1|CNS0ADPS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1456 Score = 46.1 bits (23), Expect = 0.21 Identities = 41/47 (87%) Strand = Plus / Plus Query: 77 agcaatattctcctggacagcgaaatgaatccaaaaatttcagattt 123 ||||||||||| |||||| | ||||||||||||||| |||||||| Sbjct: 816 agcaatattcttctggacgacagaatgaatccaaaaatatcagattt 862
>gb|AC192328.2| Medicago truncatula chromosome 2 BAC clone mth2-55p8, complete sequence Length = 116090 Score = 44.1 bits (22), Expect = 0.84 Identities = 22/22 (100%) Strand = Plus / Plus Query: 96 gcgaaatgaatccaaaaatttc 117 |||||||||||||||||||||| Sbjct: 115414 gcgaaatgaatccaaaaatttc 115435
>ref|NM_001066406.1| Oryza sativa (japonica cultivar-group) Os07g0537000 (Os07g0537000) mRNA, complete cds Length = 2278 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Plus Query: 188 acatatggctacatggcccctgagta 213 |||||||| ||||||||||||||||| Sbjct: 1584 acatatggatacatggcccctgagta 1609
>ref|NM_001051861.1| Oryza sativa (japonica cultivar-group) Os01g0936100 (Os01g0936100) mRNA, complete cds Length = 2568 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Plus Query: 239 aaatccgatgtctttagctttggtgt 264 ||||||||||||| |||||||||||| Sbjct: 1127 aaatccgatgtctatagctttggtgt 1152
>gb|AC182679.2| Populus trichocarpa clone Pop1-30I24, complete sequence Length = 174781 Score = 44.1 bits (22), Expect = 0.84 Identities = 49/58 (84%) Strand = Plus / Minus Query: 63 gagatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcaga 120 ||||||| ||| ||||||||||| | |||| |||||||||||||||||| ||||| Sbjct: 98332 gagatctgaaaacgagcaatattttgttggattacgaaatgaatccaaaaatctcaga 98275 Score = 44.1 bits (22), Expect = 0.84 Identities = 49/58 (84%) Strand = Plus / Minus Query: 63 gagatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcaga 120 ||||||| ||| ||||||||||| | |||| |||||||||||||||||| ||||| Sbjct: 121576 gagatctgaaaacgagcaatattttgttggattacgaaatgaatccaaaaatctcaga 121519
>ref|NM_101007.1| Arabidopsis thaliana ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase/ sugar bi> (AT1G11340) mRNA, complete cds Length = 2706 Score = 44.1 bits (22), Expect = 0.84 Identities = 43/50 (86%) Strand = Plus / Plus Query: 77 agcaatattctcctggacagcgaaatgaatccaaaaatttcagatttcgg 126 |||||||| || || ||||| ||||||| ||||| |||||||||||||| Sbjct: 2134 agcaatatacttcttgacagtgaaatgatcccaaagatttcagatttcgg 2183
>gb|AC150845.11| Medicago truncatula clone mth2-150a2, complete sequence Length = 131577 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Minus Query: 98 gaaatgaatccaaaaatttcagattt 123 ||||||||||||||||| |||||||| Sbjct: 10751 gaaatgaatccaaaaatatcagattt 10726 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Minus Query: 98 gaaatgaatccaaaaatttcagattt 123 ||||||||||||||||| |||||||| Sbjct: 16283 gaaatgaatccaaaaatatcagattt 16258 Score = 42.1 bits (21), Expect = 3.3 Identities = 51/61 (83%) Strand = Plus / Minus Query: 63 gagatcttaaaccgagcaatattctcctggacagcgaaatgaatccaaaaatttcagatt 122 ||||||| ||| |||||||| |||| ||||| ||||||||||||||||| || |||| Sbjct: 24167 gagatctgaaagcgagcaatgttcttctggatgatgaaatgaatccaaaaatatctgatt 24108 Query: 123 t 123 | Sbjct: 24107 t 24107
>dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045F02 Length = 215378 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Plus Query: 98 gaaatgaatccaaaaatttcagattt 123 ||||||||||| |||||||||||||| Sbjct: 27030 gaaatgaatcccaaaatttcagattt 27055
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Plus Query: 239 aaatccgatgtctttagctttggtgt 264 ||||||||||||| |||||||||||| Sbjct: 127686 aaatccgatgtctatagctttggtgt 127711
>gb|AF084035.1|AF084035 Arabidopsis thaliana receptor-like protein kinase (RKS1) gene, complete cds Length = 3401 Score = 44.1 bits (22), Expect = 0.84 Identities = 43/50 (86%) Strand = Plus / Plus Query: 77 agcaatattctcctggacagcgaaatgaatccaaaaatttcagatttcgg 126 |||||||| || || ||||| ||||||| ||||| |||||||||||||| Sbjct: 2499 agcaatatacttcttgacagtgaaatgatcccaaagatttcagatttcgg 2548
>dbj|AK111109.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-A05, full insert sequence Length = 770 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Plus Query: 188 acatatggctacatggcccctgagta 213 |||||||| ||||||||||||||||| Sbjct: 83 acatatggatacatggcccctgagta 108
>dbj|AK101371.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035N01, full insert sequence Length = 2568 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Plus Query: 239 aaatccgatgtctttagctttggtgt 264 ||||||||||||| |||||||||||| Sbjct: 1127 aaatccgatgtctatagctttggtgt 1152
>dbj|AK100849.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123I07, full insert sequence Length = 2279 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Plus Query: 188 acatatggctacatggcccctgagta 213 |||||||| ||||||||||||||||| Sbjct: 1584 acatatggatacatggcccctgagta 1609
>ref|NM_001074989.1| Oryza sativa (japonica cultivar-group) Os11g0681400 (Os11g0681400) mRNA, complete cds Length = 2610 Score = 42.1 bits (21), Expect = 3.3 Identities = 84/105 (80%) Strand = Plus / Plus Query: 420 agatgatgaggtggattaacatagcattgttgtgtgtacaagagaatccagctgatcgac 479 |||| ||||| || |||||||| || ||| | ||||| ||||||||| | || ||||| | Sbjct: 1100 agataatgagatgtattaacattgctttgctttgtgtgcaagagaatgcggccgatcggc 1159 Query: 480 caacaatgggagatgttgtttcaatgctaagcagtgagactatga 524 | || | | ||| |||||| |||||||||||| |||||||||| Sbjct: 1160 ccaccacgtcagaggttgttgcaatgctaagcaacgagactatga 1204
>ref|NM_001066416.1| Oryza sativa (japonica cultivar-group) Os07g0538400 (Os07g0538400) mRNA, partial cds Length = 1304 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 185 ggcacatatggctacatggcccctgagta 213 ||||||||||| |||||||| |||||||| Sbjct: 581 ggcacatatggatacatggctcctgagta 609
>ref|NM_001066201.1| Oryza sativa (japonica cultivar-group) Os07g0487300 (Os07g0487300) mRNA, complete cds Length = 2451 Score = 42.1 bits (21), Expect = 3.3 Identities = 63/77 (81%) Strand = Plus / Plus Query: 185 ggcacatatggctacatggcccctgagtatgcttcgaagggcatcttctctattaaatcc 244 ||||| ||||| || ||||| ||||||||||| || |||| |||||| | ||||| Sbjct: 1606 ggcacttatgggtatatggctcctgagtatgcatctgagggttgcttctcgctgaaatcg 1665 Query: 245 gatgtctttagctttgg 261 ||||||||||||||||| Sbjct: 1666 gatgtctttagctttgg 1682
>ref|NM_118454.1| Arabidopsis thaliana EMB1290; kinase (EMB1290) mRNA, complete cds Length = 2997 Score = 42.1 bits (21), Expect = 3.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 447 tgttgtgtgtacaagagaatccagctgatcgaccaacaatg 487 |||| ||||| ||||| ||||| || ||||||||||||||| Sbjct: 1775 tgttatgtgttcaagaaaatcctgcagatcgaccaacaatg 1815
>ref|NM_118455.3| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase (AT4G23260) mRNA, complete cds Length = 1924 Score = 42.1 bits (21), Expect = 3.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 447 tgttgtgtgtacaagagaatccagctgatcgaccaacaatg 487 |||| ||||| ||||| ||||| || ||||||||||||||| Sbjct: 1611 tgttatgtgttcaagaaaatcctgcagatcgaccaacaatg 1651
>gb|AC124962.19| Medicago truncatula clone mth2-24d19, complete sequence Length = 126541 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 aaatgaatccaaaaatttcagattt 123 |||||||||||||||| |||||||| Sbjct: 118802 aaatgaatccaaaaatatcagattt 118778
>gb|BT001060.1| Arabidopsis thaliana At4g23250/F21P8_140 mRNA, complete cds Length = 1740 Score = 42.1 bits (21), Expect = 3.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 447 tgttgtgtgtacaagagaatccagctgatcgaccaacaatg 487 |||| ||||| ||||| ||||| || ||||||||||||||| Sbjct: 1532 tgttatgtgttcaagaaaatcctgcagatcgaccaacaatg 1572
>gb|AC091812.4| Homo sapiens BAC clone RP11-613E4 from 7, complete sequence Length = 122943 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 710 tgatgcatatgtttaagtgtc 730 ||||||||||||||||||||| Sbjct: 34484 tgatgcatatgtttaagtgtc 34464
>gb|AC165156.3| Mus musculus BAC clone RP23-298I7 from chromosome 9, complete sequence Length = 198962 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 705 tcatatgatgcatatgtttaa 725 ||||||||||||||||||||| Sbjct: 85383 tcatatgatgcatatgtttaa 85403
>gb|AY140033.1| Arabidopsis thaliana protein kinase-like protein (At4g23250) mRNA, complete cds Length = 2184 Score = 42.1 bits (21), Expect = 3.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 447 tgttgtgtgtacaagagaatccagctgatcgaccaacaatg 487 |||| ||||| ||||| ||||| || ||||||||||||||| Sbjct: 1809 tgttatgtgttcaagaaaatcctgcagatcgaccaacaatg 1849
>gb|AC129713.1| Homo sapiens chromosome 5 clone RP11-391B2, complete sequence Length = 65846 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 ttggtgtaatcattttggaga 278 ||||||||||||||||||||| Sbjct: 56917 ttggtgtaatcattttggaga 56897
>gb|AC103753.2| Homo sapiens chromosome 15, clone RP11-460N1, complete sequence Length = 179822 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 aagaagagtgattggcacata 192 ||||||||||||||||||||| Sbjct: 173755 aagaagagtgattggcacata 173735
>gb|AC009292.11| Homo sapiens chromosome 15, clone RP11-34F13, complete sequence Length = 182855 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 aagaagagtgattggcacata 192 ||||||||||||||||||||| Sbjct: 12979 aagaagagtgattggcacata 12959
>gb|AY090250.1| Arabidopsis thaliana AT4g23250/F21P8_140 mRNA, complete cds Length = 1925 Score = 42.1 bits (21), Expect = 3.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 447 tgttgtgtgtacaagagaatccagctgatcgaccaacaatg 487 |||| ||||| ||||| ||||| || ||||||||||||||| Sbjct: 1611 tgttatgtgttcaagaaaatcctgcagatcgaccaacaatg 1651
>ref|NM_001078490.1| Ciona intestinalis p38 kinase (p38), mRNA dbj|AB210620.1| Ciona intestinalis mRNA for p38 kinase, complete cds, clone: cinc009m21 Length = 3582 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 56 atacatcgagatcttaaaccgagcaatat 84 |||||||||||||| ||||| |||||||| Sbjct: 504 atacatcgagatctcaaaccaagcaatat 532
>emb|AL513210.32| Human DNA sequence from clone RP11-35J6 on chromosome 6 Contains six CpG islands, complete sequence Length = 157572 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 gggaagatggaaagtggtttg 377 ||||||||||||||||||||| Sbjct: 153925 gggaagatggaaagtggtttg 153905
>emb|AL138807.12| Human DNA sequence from clone RP5-827A12 on chromosome 20 Contains part of the ATP9A (KIAA0611) gene for ATPase class II type 9A and a ribosomal protein L29 (RPL29) pseudogene, complete sequence Length = 67895 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 624 tgtctgtcacaactccaagat 644 ||||||||||||||||||||| Sbjct: 67435 tgtctgtcacaactccaagat 67455
>gb|AC123975.16| Medicago truncatula clone mth2-12m13, complete sequence Length = 121884 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 aaatgaatccaaaaatttcagattt 123 |||||||||||||||| |||||||| Sbjct: 79940 aaatgaatccaaaaatatcagattt 79964
>gb|AC008425.6| Homo sapiens chromosome 5 clone CTC-304O9, complete sequence Length = 119579 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 ttggtgtaatcattttggaga 278 ||||||||||||||||||||| Sbjct: 107031 ttggtgtaatcattttggaga 107051
>emb|BX842624.1| Neurospora crassa DNA linkage group I BAC clone B10D6 Length = 89019 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 556 caatgtaagagtgggaaatgaagat 580 ||||| ||||||||||||||||||| Sbjct: 13127 caatggaagagtgggaaatgaagat 13151
>emb|AL161559.2|ATCHRIV59 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 59 Length = 199199 Score = 42.1 bits (21), Expect = 3.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 447 tgttgtgtgtacaagagaatccagctgatcgaccaacaatg 487 |||| ||||| ||||| ||||| || ||||||||||||||| Sbjct: 18261 tgttatgtgttcaagaaaatcctgcagatcgaccaacaatg 18221 Score = 42.1 bits (21), Expect = 3.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 447 tgttgtgtgtacaagagaatccagctgatcgaccaacaatg 487 |||| ||||| ||||| ||||| || ||||||||||||||| Sbjct: 21317 tgttatgtgttcaagaaaatcctgcagatcgaccaacaatg 21277
>emb|AL022347.1|ATF21P8 Arabidopsis thaliana DNA chromosome 4, BAC clone F21P8 (ESSA project) Length = 85785 Score = 42.1 bits (21), Expect = 3.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 447 tgttgtgtgtacaagagaatccagctgatcgaccaacaatg 487 |||| ||||| ||||| ||||| || ||||||||||||||| Sbjct: 52615 tgttatgtgttcaagaaaatcctgcagatcgaccaacaatg 52575 Score = 42.1 bits (21), Expect = 3.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 447 tgttgtgtgtacaagagaatccagctgatcgaccaacaatg 487 |||| ||||| ||||| ||||| || ||||||||||||||| Sbjct: 55671 tgttatgtgttcaagaaaatcctgcagatcgaccaacaatg 55631
>gb|AC156837.2| Mus musculus BAC clone RP23-18K24 from chromosome 9, complete sequence Length = 205623 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 705 tcatatgatgcatatgtttaa 725 ||||||||||||||||||||| Sbjct: 5785 tcatatgatgcatatgtttaa 5805
>gb|AF084037.1|AF084037 Arabidopsis thaliana receptor-like protein kinase (RKC1) gene, complete cds Length = 3541 Score = 42.1 bits (21), Expect = 3.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 447 tgttgtgtgtacaagagaatccagctgatcgaccaacaatg 487 |||| ||||| ||||| ||||| || ||||||||||||||| Sbjct: 2701 tgttatgtgttcaagaaaatcctgcagatcgaccaacaatg 2741
>emb|X58449.1|BMERB2DNA B.mori ErB.2 gene for chorion protein Length = 2047 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 774 tttccaaactagttagaatacatac 798 ||||||||||| ||||||||||||| Sbjct: 116 tttccaaactatttagaatacatac 140
>gb|AC083863.2|AC083863 Homo sapiens chromosome 7 clone RP11-162O1, complete sequence Length = 179488 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 710 tgatgcatatgtttaagtgtc 730 ||||||||||||||||||||| Sbjct: 53199 tgatgcatatgtttaagtgtc 53219
>dbj|AK173857.1| Ciona intestinalis cDNA, clone:cicl006g22, full insert sequence Length = 1395 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 56 atacatcgagatcttaaaccgagcaatat 84 |||||||||||||| ||||| |||||||| Sbjct: 504 atacatcgagatctcaaaccaagcaatat 532
>dbj|AK112096.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-H06, full insert sequence Length = 1304 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 185 ggcacatatggctacatggcccctgagta 213 ||||||||||| |||||||| |||||||| Sbjct: 581 ggcacatatggatacatggctcctgagta 609
>emb|BX323030.5| Zebrafish DNA sequence from clone DKEYP-77D7 in linkage group 1, complete sequence Length = 181363 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 717 tatgtttaagtgtcatttcaaatgt 741 |||||||| |||||||||||||||| Sbjct: 87470 tatgtttacgtgtcatttcaaatgt 87494
>emb|AL772207.4| Mouse DNA sequence from clone RP23-91G17 on chromosome 4, complete sequence Length = 148320 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 636 ctccaagataagtttcccctg 656 ||||||||||||||||||||| Sbjct: 94690 ctccaagataagtttcccctg 94710
>gb|AC152423.17| Medicago truncatula clone mth2-31c9, complete sequence Length = 112783 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 702 atgtcatatgatgcatatgtt 722 ||||||||||||||||||||| Sbjct: 40133 atgtcatatgatgcatatgtt 40113 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 165,340,425 Number of extensions: 8746011 Number of successful extensions: 168086 Number of sequences better than 10.0: 109 Number of HSP's gapped: 168054 Number of HSP's successfully gapped: 186 Length of query: 877 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 855 Effective length of database: 18,508,616,841 Effective search space: 15824867399055 Effective search space used: 15824867399055 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)