ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf42i20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK072439:Os06g0215200 | 310 | 2e-84 | 2 | AK065717:Os06g0215200 | 310 | 2e-84 | 3 | AK069161:Os02g0167500 | 71 | 2e-12 | 4 | AK061707:Os06g0215200 | 70 | 2e-12 | 5 | AK101491:Os09g0372400 | 56 | 4e-08 | 6 | AK064341:Os09g0372400 | 56 | 4e-08 | 7 | Os01g0170100:Os01g0170100 | 36 | 0.045 | 8 | AK073439:Os05g0169400 | 31 | 1.9 | 9 | AK066144:Os10g0324600 | 29 | 7.2 | 10 | AK058350:Os10g0324600 | 29 | 7.2 |
|---|
>AK072439:Os06g0215200 | Length = 243 Score = 310 bits (793), Expect = 2e-84 Identities = 153/244 (62%), Positives = 171/244 (70%) Frame = +2 Query: 170 MTEYWVSQGNKWCDLCKIFISNNPFSIRTHELGKRHKDNVTQRLSTMQKDGXXXXXXXXX 349 MTEYWVSQGNKWCD CKI+I+NNP SIRTHE+GKRHKDNVT+RL+TMQK+G Sbjct: 1 MTEYWVSQGNKWCDFCKIYIANNPLSIRTHEIGKRHKDNVTKRLATMQKEGAAKEKEQQQ 60 Query: 350 XXXXXXXXXXXXXXSYQKDLENNQRNTDGDSSAAPGEGWVFDSTSGYYYDKSTGLYYDSN 529 SYQKDLEN+QRN DGD+SAAPG+GW FDSTSGYYYDKSTGLY+DSN Sbjct: 61 AARALKQIEAKAKKSYQKDLENSQRNVDGDTSAAPGDGWEFDSTSGYYYDKSTGLYFDSN 120 Query: 530 SGFYYSDGLGKWVTQEEAYKWAETSETNVAQSSTSQPKPTXXXXXXXXXXXXXAPGVVVT 709 SGFYYSDGLGKWVTQEEAY WA+TS+ N QSS+SQ KPT APG+VV Sbjct: 121 SGFYYSDGLGKWVTQEEAYAWAKTSQANAGQSSSSQTKPTASVATVPTIKGGQAPGLVVK 180 Query: 710 KQLNPMRPVKGAPSALAANKRKREDTKKPKVVSXXXXXXXXXXXXXXXXXXXXXXPLMGL 889 K LNPMR VKGAPSA+A NKRKRED KPKV+S PLMGL Sbjct: 181 KPLNPMRTVKGAPSAIAVNKRKRED-GKPKVISKEEEAALKAREAARKRMEDREKPLMGL 239 Query: 890 YKTY 901 Y++Y Sbjct: 240 YRSY 243
>AK065717:Os06g0215200 | Length = 243 Score = 310 bits (793), Expect = 2e-84 Identities = 153/244 (62%), Positives = 171/244 (70%) Frame = +2 Query: 170 MTEYWVSQGNKWCDLCKIFISNNPFSIRTHELGKRHKDNVTQRLSTMQKDGXXXXXXXXX 349 MTEYWVSQGNKWCD CKI+I+NNP SIRTHE+GKRHKDNVT+RL+TMQK+G Sbjct: 1 MTEYWVSQGNKWCDFCKIYIANNPLSIRTHEIGKRHKDNVTKRLATMQKEGAAKEKEQQQ 60 Query: 350 XXXXXXXXXXXXXXSYQKDLENNQRNTDGDSSAAPGEGWVFDSTSGYYYDKSTGLYYDSN 529 SYQKDLEN+QRN DGD+SAAPG+GW FDSTSGYYYDKSTGLY+DSN Sbjct: 61 AARALKQIEAKAKKSYQKDLENSQRNVDGDTSAAPGDGWEFDSTSGYYYDKSTGLYFDSN 120 Query: 530 SGFYYSDGLGKWVTQEEAYKWAETSETNVAQSSTSQPKPTXXXXXXXXXXXXXAPGVVVT 709 SGFYYSDGLGKWVTQEEAY WA+TS+ N QSS+SQ KPT APG+VV Sbjct: 121 SGFYYSDGLGKWVTQEEAYAWAKTSQANAGQSSSSQTKPTASVATVPTIKGGQAPGLVVK 180 Query: 710 KQLNPMRPVKGAPSALAANKRKREDTKKPKVVSXXXXXXXXXXXXXXXXXXXXXXPLMGL 889 K LNPMR VKGAPSA+A NKRKRED KPKV+S PLMGL Sbjct: 181 KPLNPMRTVKGAPSAIAVNKRKRED-GKPKVISKEEEAALKAREAARKRMEDREKPLMGL 239 Query: 890 YKTY 901 Y++Y Sbjct: 240 YRSY 243
>AK069161:Os02g0167500 | Length = 889 Score = 70.9 bits (172), Expect = 2e-12 Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 5/143 (3%) Frame = +2 Query: 395 YQKDLENNQRNTDGDSSAAPGEGWVFDSTSGYYYDKSTGLYYDSNSGFYYSDGLGKWVT- 571 Y D + N + S +AP G+V+D SGYYYD ++G YYD N+G YY G W + Sbjct: 447 YNPDDKLNSNSEPQSSGSAPQSGFVWDEKSGYYYDSASGFYYDGNTGLYYDGNAGVWYSY 506 Query: 572 QEEAYKWAETSETNVAQSSTSQPK-PTXXXXXXXXXXXXXAPGVVV---TKQLNPMRPVK 739 ++ ++ SE N ++++ T AP + K P Sbjct: 507 DQQTQQYVPCSEQNSSKAAGDMANTSTKTSESSGKNVVISAPAATIKQSEKTSLPEAVQA 566 Query: 740 GAPSALAANKRKREDTKKPKVVS 808 A +ALAA K+++E K+ K+ S Sbjct: 567 AASAALAAEKKEKERAKEIKLAS 589
>AK061707:Os06g0215200 | Length = 86 Score = 70.5 bits (171), Expect = 2e-12 Identities = 41/87 (47%), Positives = 46/87 (52%) Frame = +2 Query: 641 KPTXXXXXXXXXXXXXAPGVVVTKQLNPMRPVKGAPSALAANKRKREDTKKPKVVSXXXX 820 KPT APG+VV K LNPMR VKGAPSA+A NKRKRED KPKV+S Sbjct: 1 KPTASVATVPTIKGGQAPGLVVKKPLNPMRTVKGAPSAIAVNKRKRED-GKPKVISKEEE 59 Query: 821 XXXXXXXXXXXXXXXXXXPLMGLYKTY 901 PLMGLY++Y Sbjct: 60 AALKAREAARKRMEDREKPLMGLYRSY 86
>AK101491:Os09g0372400 | Length = 427 Score = 56.2 bits (134), Expect = 4e-08 Identities = 29/78 (37%), Positives = 38/78 (48%) Frame = +2 Query: 413 NNQRNTDGDSSAAPGEGWVFDSTSGYYYDKSTGLYYDSNSGFYYSDGLGKWVTQEEAYKW 592 N + + + +V+D TSGYYY STG YYDS SG Y S G W + +E + Sbjct: 346 NETSGAEKGENGSVSSDYVYDPTSGYYYSSSTGYYYDSTSGCYCSASTGAWYSYDE--QT 403 Query: 593 AETSETNVAQSSTSQPKP 646 E E Q+ST P Sbjct: 404 GEYKEIQSEQASTVNETP 421
>AK064341:Os09g0372400 | Length = 214 Score = 56.2 bits (134), Expect = 4e-08 Identities = 29/78 (37%), Positives = 38/78 (48%) Frame = +2 Query: 413 NNQRNTDGDSSAAPGEGWVFDSTSGYYYDKSTGLYYDSNSGFYYSDGLGKWVTQEEAYKW 592 N + + + +V+D TSGYYY STG YYDS SG Y S G W + +E + Sbjct: 133 NETSGAEKGENGSVSSDYVYDPTSGYYYSSSTGYYYDSTSGCYCSASTGAWYSYDE--QT 190 Query: 593 AETSETNVAQSSTSQPKP 646 E E Q+ST P Sbjct: 191 GEYKEIQSEQASTVNETP 208
>Os01g0170100:Os01g0170100 | Length = 462 Score = 36.2 bits (82), Expect = 0.045 Identities = 19/45 (42%), Positives = 27/45 (60%) Frame = +2 Query: 431 DGDSSAAPGEGWVFDSTSGYYYDKSTGLYYDSNSGFYYSDGLGKW 565 DG++S A E +D S YY STG Y+D +G+YYS G++ Sbjct: 10 DGEASGARFE---WDEDSQLYYHASTGFYHDPVAGWYYSGRDGQY 51
>AK073439:Os05g0169400 | Length = 461 Score = 30.8 bits (68), Expect = 1.9 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Frame = +3 Query: 864 TGRSLSWDYTRLTEAPMLP--SSMGGAPSCAKTVVMPMDDIVLK 989 TG + S +Y+RL A MLP +S PS + +P+DD+V K Sbjct: 369 TGSAGSGNYSRLPTAQMLPQAASASSTPSASSGNRVPIDDVVDK 412
>AK066144:Os10g0324600 | Length = 337 Score = 28.9 bits (63), Expect = 7.2 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +2 Query: 206 CDLCKIFISNNPFSIRTHELGKRHKDNV 289 C++CKI + P +R H+ GK+HK N+ Sbjct: 196 CEVCKIQC-DTPEVLRIHKTGKKHKKNL 222
>AK058350:Os10g0324600 | Length = 337 Score = 28.9 bits (63), Expect = 7.2 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +2 Query: 206 CDLCKIFISNNPFSIRTHELGKRHKDNV 289 C++CKI + P +R H+ GK+HK N+ Sbjct: 196 CEVCKIQC-DTPEVLRIHKTGKKHKKNL 222 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 30,545,819 Number of extensions: 648255 Number of successful extensions: 1997 Number of sequences better than 10.0: 10 Number of HSP's gapped: 1973 Number of HSP's successfully gapped: 10 Length of query: 388 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 285 Effective length of database: 11,275,632 Effective search space: 3213555120 Effective search space used: 3213555120 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
