ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf42i20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001063671.1| Oryza sativa (japonica cultivar-group) Os06g... 359 1e-95
2dbj|AK065717.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 1e-95
3gb|DQ246092.1| Zea mays clone 15750 mRNA sequence 337 5e-89
4dbj|AK072439.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 1e-37
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 147 1e-31
6dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic D... 147 1e-31
7dbj|AK061707.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 2e-17
8ref|NM_103847.3| Arabidopsis thaliana nucleic acid binding / zin... 58 7e-05
9emb|BX813576.1|CNS0ACD1 Arabidopsis thaliana Full-length cDNA Co... 58 7e-05
10emb|BX813573.1|CNS0ACBW Arabidopsis thaliana Full-length cDNA Co... 58 7e-05
11gb|BT010196.1| Arabidopsis thaliana At1g49590 gene, complete cds 52 0.005
12emb|BX816601.1|CNS0ABK8 Arabidopsis thaliana Full-length cDNA Co... 50 0.018
13gb|AC151621.20| Medicago truncatula clone mth2-14p3, complete se... 48 0.072
14emb|CT737339.6| Pig DNA sequence from clone CH242-154E22 on chro... 46 0.28
15gb|AC160395.2| Mus musculus BAC clone RP23-36C19 from chromosome... 46 0.28
16gb|AC161493.6| Mus musculus chromosome 1, clone RP24-77I21, comp... 44 1.1
17ref|XM_729219.1| Plasmodium chabaudi chabaudi hypothetical prote... 44 1.1
18gb|U66590.1|HSU66590 Human ribosomal protein L5 pseudogene mRNA,... 44 1.1
19gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 44 1.1
20gb|AC139376.3| Mus musculus BAC clone RP24-420A20 from chromosom... 42 4.4
21gb|AC135962.4| Mus musculus BAC clone RP23-342H15 from chromosom... 42 4.4
22gb|AC124681.3| Mus musculus BAC clone RP24-261H7 from chromosome... 42 4.4
23gb|AC099742.2| Papio anubis clone RP41-167P22, complete sequence 42 4.4
24emb|BX511223.6| Zebrafish DNA sequence from clone DKEYP-96B6 in ... 42 4.4
25gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 4.4
26emb|AL713920.14| Mouse DNA sequence from clone RP23-330B20 on ch... 42 4.4

>ref|NM_001063671.1| Oryza sativa (japonica cultivar-group) Os06g0215200 (Os06g0215200)
           mRNA, complete cds
          Length = 1157
 Score =  359 bits (181), Expect = 1e-95
 Identities = 594/731 (81%), Gaps = 3/731 (0%)
 Strand = Plus / Plus

                                                                       
Query: 163 gcccgccatgactgagtattgggtgagccaaggaaacaaatggtgcgacttgtgcaaaat 222
           |||||||||||| ||||| |||||||||||||||||||||||||| ||||| || || ||
Sbjct: 118 gcccgccatgacggagtactgggtgagccaaggaaacaaatggtgtgacttctgtaagat 177

                                                                       
Query: 223 ctttatatctaacaatccgttcagcatcaggacacatgaactcggcaaacgccacaagga 282
            |  ||| |||| || ||| | |||||||| ||||||||| |||| || |||||||||||
Sbjct: 178 ttacatagctaataacccgctaagcatcagaacacatgaaatcggtaagcgccacaagga 237

                                                                       
Query: 283 caatgtcacccaaagattgtctacgatgcaaaaggatggcgctgctaaggaaaaggagca 342
           |||||||||  |||||||| | || ||||||||||| || ||||| || |||||||||||
Sbjct: 238 caatgtcactaaaagattggcaaccatgcaaaaggagggtgctgccaaagaaaaggagca 297

                                                                       
Query: 343 gcagcaagcagctaaagccctccagctgatagaggctaaagctaaaaagagttaccaaaa 402
           ||||||||||||    |||||| |||  ||||| ||||||||||||||||| ||||||||
Sbjct: 298 gcagcaagcagcccgggccctcaagcaaatagaagctaaagctaaaaagagctaccaaaa 357

                                                                       
Query: 403 agatttggagaataaccagagaaacaccgatggtgacagttctgcagcacctggagaagg 462
           |||||| ||||| |  || || ||    || ||||||| |||||| ||||||||||| ||
Sbjct: 358 agatttagagaacagtcaaaggaatgtggacggtgacacttctgcggcacctggagatgg 417

                                                                       
Query: 463 atgggtatttgactcaacttcaggatattattatgataagtctactggactttactacga 522
           ||||| ||| ||||| ||||||||||| |||||||| || ||||||||||| || |  ||
Sbjct: 418 atgggaattcgactctacttcaggatactattatgacaaatctactggactctattttga 477

                                                                       
Query: 523 ctcgaactctggtttctattattccgacggattaggcaaatgggtcacccaggaagaggc 582
           ||| || ||||||||||| ||||| ||||| ||||| ||||||||||| |||||||||||
Sbjct: 478 ctcaaattctggtttctactattctgacggtttaggtaaatgggtcactcaggaagaggc 537

                                                                       
Query: 583 atacaagtgggcggaaacctcagaaactaatgttgcccaatcctcgacctcacaaccaaa 642
           ||||   |||||  |||||||  || |||||| ||  |||||||| |  |||||| ||||
Sbjct: 538 atacgcatgggcaaaaacctcccaagctaatgctgggcaatcctcaagttcacaaacaaa 597

                                                                       
Query: 643 accgactggtggaagcgggcctgtccctggtattaaaggagggccagccccaggtgtggt 702
           ||| |||| |  |   | | |||||||    |||||||| || | ||| |||||| ||||
Sbjct: 598 accaactgcttcagttgcgactgtccccacaattaaagggggccaagctccaggtttggt 657

                                                                       
Query: 703 tgtcacgaaacaactgaacccgatgagacctgtgaagggcgctccgtcagcccttgccgc 762
            |||| ||||| |||||| ||||||||| |||| ||||| ||||| || ||| |||| | 
Sbjct: 658 cgtcaagaaaccactgaatccgatgagaactgtaaagggtgctccatccgccattgctgt 717

                                                                       
Query: 763 taacaagcgaaaaagagaggacaccaagaagcccaaggtggtttccaaggaggaggaggc 822
           ||||||| ||||||||||||||  |   |||||||| ||| | || ||||||||||| ||
Sbjct: 718 taacaagagaaaaagagaggacggc---aagcccaaagtgatctcaaaggaggaggaagc 774

                                                                       
Query: 823 ggcactcagagcacgggaagcagcgaggaaaagagtggaggacagggagaagcctctcat 882
            || || | ||| || |||||||| || |||||| ||||||| |||||||||||  | ||
Sbjct: 775 cgcccttaaagcgcgtgaagcagcaagaaaaagaatggaggatagggagaagcccttaat 834

                      
Query: 883 gggattataca 893
           |||| ||||||
Sbjct: 835 gggactataca 845



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>dbj|AK065717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038O15, full
           insert sequence
          Length = 1159

 Score =  359 bits (181), Expect = 1e-95
 Identities = 594/731 (81%), Gaps = 3/731 (0%)
 Strand = Plus / Plus

                                                                       
Query: 163 gcccgccatgactgagtattgggtgagccaaggaaacaaatggtgcgacttgtgcaaaat 222
           |||||||||||| ||||| |||||||||||||||||||||||||| ||||| || || ||
Sbjct: 120 gcccgccatgacggagtactgggtgagccaaggaaacaaatggtgtgacttctgtaagat 179

                                                                       
Query: 223 ctttatatctaacaatccgttcagcatcaggacacatgaactcggcaaacgccacaagga 282
            |  ||| |||| || ||| | |||||||| ||||||||| |||| || |||||||||||
Sbjct: 180 ttacatagctaataacccgctaagcatcagaacacatgaaatcggtaagcgccacaagga 239

                                                                       
Query: 283 caatgtcacccaaagattgtctacgatgcaaaaggatggcgctgctaaggaaaaggagca 342
           |||||||||  |||||||| | || ||||||||||| || ||||| || |||||||||||
Sbjct: 240 caatgtcactaaaagattggcaaccatgcaaaaggagggtgctgccaaagaaaaggagca 299

                                                                       
Query: 343 gcagcaagcagctaaagccctccagctgatagaggctaaagctaaaaagagttaccaaaa 402
           ||||||||||||    |||||| |||  ||||| ||||||||||||||||| ||||||||
Sbjct: 300 gcagcaagcagcccgggccctcaagcaaatagaagctaaagctaaaaagagctaccaaaa 359

                                                                       
Query: 403 agatttggagaataaccagagaaacaccgatggtgacagttctgcagcacctggagaagg 462
           |||||| ||||| |  || || ||    || ||||||| |||||| ||||||||||| ||
Sbjct: 360 agatttagagaacagtcaaaggaatgtggacggtgacacttctgcggcacctggagatgg 419

                                                                       
Query: 463 atgggtatttgactcaacttcaggatattattatgataagtctactggactttactacga 522
           ||||| ||| ||||| ||||||||||| |||||||| || ||||||||||| || |  ||
Sbjct: 420 atgggaattcgactctacttcaggatactattatgacaaatctactggactctattttga 479

                                                                       
Query: 523 ctcgaactctggtttctattattccgacggattaggcaaatgggtcacccaggaagaggc 582
           ||| || ||||||||||| ||||| ||||| ||||| ||||||||||| |||||||||||
Sbjct: 480 ctcaaattctggtttctactattctgacggtttaggtaaatgggtcactcaggaagaggc 539

                                                                       
Query: 583 atacaagtgggcggaaacctcagaaactaatgttgcccaatcctcgacctcacaaccaaa 642
           ||||   |||||  |||||||  || |||||| ||  |||||||| |  |||||| ||||
Sbjct: 540 atacgcatgggcaaaaacctcccaagctaatgctgggcaatcctcaagttcacaaacaaa 599

                                                                       
Query: 643 accgactggtggaagcgggcctgtccctggtattaaaggagggccagccccaggtgtggt 702
           ||| |||| |  |   | | |||||||    |||||||| || | ||| |||||| ||||
Sbjct: 600 accaactgcttcagttgcgactgtccccacaattaaagggggccaagctccaggtttggt 659

                                                                       
Query: 703 tgtcacgaaacaactgaacccgatgagacctgtgaagggcgctccgtcagcccttgccgc 762
            |||| ||||| |||||| ||||||||| |||| ||||| ||||| || ||| |||| | 
Sbjct: 660 cgtcaagaaaccactgaatccgatgagaactgtaaagggtgctccatccgccattgctgt 719

                                                                       
Query: 763 taacaagcgaaaaagagaggacaccaagaagcccaaggtggtttccaaggaggaggaggc 822
           ||||||| ||||||||||||||  |   |||||||| ||| | || ||||||||||| ||
Sbjct: 720 taacaagagaaaaagagaggacggc---aagcccaaagtgatctcaaaggaggaggaagc 776

                                                                       
Query: 823 ggcactcagagcacgggaagcagcgaggaaaagagtggaggacagggagaagcctctcat 882
            || || | ||| || |||||||| || |||||| ||||||| |||||||||||  | ||
Sbjct: 777 cgcccttaaagcgcgtgaagcagcaagaaaaagaatggaggatagggagaagcccttaat 836

                      
Query: 883 gggattataca 893
           |||| ||||||
Sbjct: 837 gggactataca 847



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>gb|DQ246092.1| Zea mays clone 15750 mRNA sequence
          Length = 1174

 Score =  337 bits (170), Expect = 5e-89
 Identities = 362/426 (84%)
 Strand = Plus / Plus

                                                                       
Query: 165 ccgccatgactgagtattgggtgagccaaggaaacaaatggtgcgacttgtgcaaaatct 224
           |||||||||| |||||||||||||||||||||||||||||||||||||| || || || |
Sbjct: 148 ccgccatgacggagtattgggtgagccaaggaaacaaatggtgcgacttctgtaagattt 207

                                                                       
Query: 225 ttatatctaacaatccgttcagcatcaggacacatgaactcggcaaacgccacaaggaca 284
            |||| | |||||| | ||||||||||||||||||||||| || || |||||||||||||
Sbjct: 208 atatagcaaacaattccttcagcatcaggacacatgaacttggtaagcgccacaaggaca 267

                                                                       
Query: 285 atgtcacccaaagattgtctacgatgcaaaaggatggcgctgctaaggaaaaggagcagc 344
           |||||||| || || |||| || |||||||| ||  | |   | ||||||||||| ||||
Sbjct: 268 atgtcaccaaacgactgtcaacaatgcaaaaagagagtgagacaaaggaaaaggaacagc 327

                                                                       
Query: 345 agcaagcagctaaagccctccagctgatagaggctaaagctaaaaagagttaccaaaaag 404
           ||||||| ||   |||||| |||| |||||| || ||||||||||||||||| |||||||
Sbjct: 328 agcaagctgcacgagccctacagcagatagaagcaaaagctaaaaagagttatcaaaaag 387

                                                                       
Query: 405 atttggagaataaccagagaaacaccgatggtgacagttctgcagcacctggagaaggat 464
           |||| |||||||||||||| ||    ||||| |||| |||||||||||||||||| ||||
Sbjct: 388 atttagagaataaccagaggaatgttgatggagacacttctgcagcacctggagatggat 447

                                                                       
Query: 465 gggtatttgactcaacttcaggatattattatgataagtctactggactttactacgact 524
           ||||  |||||||  | |||||||||||  |||| || |||||||||||||||||||| |
Sbjct: 448 gggtgcttgactcggcgtcaggatattaccatgacaaatctactggactttactacgatt 507

                                                                       
Query: 525 cgaactctggtttctattattccgacggattaggcaaatgggtcacccaggaagaggcat 584
           | |||||||| ||||||||||| ||| | |||||||| ||||| ||||| |||||||| |
Sbjct: 508 caaactctggcttctattattctgacagtttaggcaagtgggttacccaagaagaggcgt 567

                 
Query: 585 acaagt 590
           ||||||
Sbjct: 568 acaagt 573



 Score =  123 bits (62), Expect = 2e-24
 Identities = 101/114 (88%)
 Strand = Plus / Plus

                                                                       
Query: 791 aagcccaaggtggtttccaaggaggaggaggcggcactcagagcacgggaagcagcgagg 850
           |||||||||| ||| |||||||||||||| ||||| |||| ||| ||||||||||| |||
Sbjct: 780 aagcccaaggcggtctccaaggaggaggaagcggccctcaaagcgcgggaagcagcaagg 839

                                                                 
Query: 851 aaaagagtggaggacagggagaagcctctcatgggattatacaagacttactga 904
           || ||||||||||| || |||||||| || ||||||||||||||||| ||||||
Sbjct: 840 aagagagtggaggatagagagaagccgctgatgggattatacaagacgtactga 893



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>dbj|AK072439.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111C14, full
           insert sequence
          Length = 2720

 Score =  167 bits (84), Expect = 1e-37
 Identities = 165/192 (85%)
 Strand = Plus / Plus

                                                                       
Query: 163 gcccgccatgactgagtattgggtgagccaaggaaacaaatggtgcgacttgtgcaaaat 222
           |||||||||||| ||||| |||||||||||||||||||||||||| ||||| || || ||
Sbjct: 109 gcccgccatgacggagtactgggtgagccaaggaaacaaatggtgtgacttctgtaagat 168

                                                                       
Query: 223 ctttatatctaacaatccgttcagcatcaggacacatgaactcggcaaacgccacaagga 282
            |  ||| |||| || ||| | |||||||| ||||||||| |||| || |||||||||||
Sbjct: 169 ttacatagctaataacccgctaagcatcagaacacatgaaatcggtaagcgccacaagga 228

                                                                       
Query: 283 caatgtcacccaaagattgtctacgatgcaaaaggatggcgctgctaaggaaaaggagca 342
           |||||||||  |||||||| | || ||||||||||| || ||||| || |||||||||||
Sbjct: 229 caatgtcactaaaagattggcaaccatgcaaaaggagggtgctgccaaagaaaaggagca 288

                       
Query: 343 gcagcaagcagc 354
           ||||||||||||
Sbjct: 289 gcagcaagcagc 300



 Score =  159 bits (80), Expect = 3e-35
 Identities = 346/434 (79%), Gaps = 3/434 (0%)
 Strand = Plus / Plus

                                                                        
Query: 460  aggatgggtatttgactcaacttcaggatattattatgataagtctactggactttacta 519
            |||||||| ||| ||||| ||||||||||| |||||||| || ||||||||||| || | 
Sbjct: 1877 aggatgggaattcgactctacttcaggatactattatgacaaatctactggactctattt 1936

                                                                        
Query: 520  cgactcgaactctggtttctattattccgacggattaggcaaatgggtcacccaggaaga 579
             ||||| || ||||||||||| ||||| ||||| ||||| ||||||||||| ||||||||
Sbjct: 1937 tgactcaaattctggtttctactattctgacggtttaggtaaatgggtcactcaggaaga 1996

                                                                        
Query: 580  ggcatacaagtgggcggaaacctcagaaactaatgttgcccaatcctcgacctcacaacc 639
            |||||||   |||||  |||||||  || |||||| ||  |||||||| |  |||||| |
Sbjct: 1997 ggcatacgcatgggcaaaaacctcccaagctaatgctgggcaatcctcaagttcacaaac 2056

                                                                        
Query: 640  aaaaccgactggtggaagcgggcctgtccctggtattaaaggagggccagccccaggtgt 699
            |||||| |||| |  |   | | |||||||    |||||||| || | ||| |||||| |
Sbjct: 2057 aaaaccaactgcttcagttgcgactgtccccacaattaaagggggccaagctccaggttt 2116

                                                                        
Query: 700  ggttgtcacgaaacaactgaacccgatgagacctgtgaagggcgctccgtcagcccttgc 759
            ||| |||| ||||| |||||| ||||||||| |||| ||||| ||||| || ||| ||||
Sbjct: 2117 ggtcgtcaagaaaccactgaatccgatgagaactgtaaagggtgctccatccgccattgc 2176

                                                                        
Query: 760  cgctaacaagcgaaaaagagaggacaccaagaagcccaaggtggtttccaaggaggagga 819
             | ||||||| | ||||||||||||  |   |||||||| ||| | || |||||||||||
Sbjct: 2177 tgttaacaagagcaaaagagaggacggc---aagcccaaagtgatctcaaaggaggagga 2233

                                                                        
Query: 820  ggcggcactcagagcacgggaagcagcgaggaaaagagtggaggacagggagaagcctct 879
             || || || | ||| || |||||||| || |||||| ||||||| |||||||||||  |
Sbjct: 2234 agccgcccttaaagcgcgtgaagcagcaagaaaaagaatggaggatagggagaagccctt 2293

                          
Query: 880  catgggattataca 893
             |||||| ||||||
Sbjct: 2294 aatgggactataca 2307



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 380 aaagctaaaaagagttaccaaaaagatttggagaa 414
           |||||||||||||| |||||||||||||| |||||
Sbjct: 570 aaagctaaaaagagctaccaaaaagatttagagaa 604



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score =  147 bits (74), Expect = 1e-31
 Identities = 152/178 (85%)
 Strand = Plus / Minus

                                                                           
Query: 177     agtattgggtgagccaaggaaacaaatggtgcgacttgtgcaaaatctttatatctaaca 236
               |||| |||||||||||||||||||||||||| ||||| || || || |  ||| |||| |
Sbjct: 5870841 agtactgggtgagccaaggaaacaaatggtgtgacttctgtaagatttacatagctaata 5870782

                                                                           
Query: 237     atccgttcagcatcaggacacatgaactcggcaaacgccacaaggacaatgtcacccaaa 296
               | ||| | |||||||| ||||||||| |||| || ||||||||||||||||||||  |||
Sbjct: 5870781 acccgctaagcatcagaacacatgaaatcggtaagcgccacaaggacaatgtcactaaaa 5870722

                                                                         
Query: 297     gattgtctacgatgcaaaaggatggcgctgctaaggaaaaggagcagcagcaagcagc 354
               ||||| | || ||||||||||| || ||||| || |||||||||||||||||||||||
Sbjct: 5870721 gattggcaaccatgcaaaaggagggtgctgccaaagaaaaggagcagcagcaagcagc 5870664



 Score = 99.6 bits (50), Expect = 2e-17
 Identities = 178/220 (80%), Gaps = 3/220 (1%)
 Strand = Plus / Minus

                                                                           
Query: 674     attaaaggagggccagccccaggtgtggttgtcacgaaacaactgaacccgatgagacct 733
               |||||||| || | ||| |||||| |||| |||| ||||| |||||| ||||||||| ||
Sbjct: 5868772 attaaagggggccaagctccaggtttggtcgtcaagaaaccactgaatccgatgagaact 5868713

                                                                           
Query: 734     gtgaagggcgctccgtcagcccttgccgctaacaagcgaaaaagagaggacaccaagaag 793
               || ||||| ||||| || ||| |||| | ||||||| ||||||||||||||  |   |||
Sbjct: 5868712 gtaaagggtgctccatccgccattgctgttaacaagagaaaaagagaggacggc---aag 5868656

                                                                           
Query: 794     cccaaggtggtttccaaggaggaggaggcggcactcagagcacgggaagcagcgaggaaa 853
               ||||| ||| | || ||||||||||| || || || | ||| || |||||||| || |||
Sbjct: 5868655 cccaaagtgatctcaaaggaggaggaagccgcccttaaagcgcgtgaagcagcaagaaaa 5868596

                                                       
Query: 854     agagtggaggacagggagaagcctctcatgggattataca 893
               ||| ||||||| |||||||||||  | |||||| ||||||
Sbjct: 5868595 agaatggaggatagggagaagcccttaatgggactataca 5868556



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                           
Query: 460     aggatgggtatttgactcaacttcaggatattattatgataagtctactggactttacta 519
               |||||||| ||| ||||| ||||||||||| |||||||| || ||||||||||| || | 
Sbjct: 5869087 aggatgggaattcgactctacttcaggatactattatgacaaatctactggactctattt 5869028

                                                      
Query: 520     cgactcgaactctggtttctattattccgacggattagg 558
                ||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 5869027 tgactcaaattctggtttctactattctgacggtttagg 5868989



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                  
Query: 380     aaagctaaaaagagttaccaaaaagatttggagaa 414
               |||||||||||||| |||||||||||||| |||||
Sbjct: 5870394 aaagctaaaaagagctaccaaaaagatttagagaa 5870360



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>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0537F07
          Length = 147724

 Score =  147 bits (74), Expect = 1e-31
 Identities = 152/178 (85%)
 Strand = Plus / Minus

                                                                         
Query: 177   agtattgggtgagccaaggaaacaaatggtgcgacttgtgcaaaatctttatatctaaca 236
             |||| |||||||||||||||||||||||||| ||||| || || || |  ||| |||| |
Sbjct: 71616 agtactgggtgagccaaggaaacaaatggtgtgacttctgtaagatttacatagctaata 71557

                                                                         
Query: 237   atccgttcagcatcaggacacatgaactcggcaaacgccacaaggacaatgtcacccaaa 296
             | ||| | |||||||| ||||||||| |||| || ||||||||||||||||||||  |||
Sbjct: 71556 acccgctaagcatcagaacacatgaaatcggtaagcgccacaaggacaatgtcactaaaa 71497

                                                                       
Query: 297   gattgtctacgatgcaaaaggatggcgctgctaaggaaaaggagcagcagcaagcagc 354
             ||||| | || ||||||||||| || ||||| || |||||||||||||||||||||||
Sbjct: 71496 gattggcaaccatgcaaaaggagggtgctgccaaagaaaaggagcagcagcaagcagc 71439



 Score = 99.6 bits (50), Expect = 2e-17
 Identities = 178/220 (80%), Gaps = 3/220 (1%)
 Strand = Plus / Minus

                                                                         
Query: 674   attaaaggagggccagccccaggtgtggttgtcacgaaacaactgaacccgatgagacct 733
             |||||||| || | ||| |||||| |||| |||| ||||| |||||| ||||||||| ||
Sbjct: 69547 attaaagggggccaagctccaggtttggtcgtcaagaaaccactgaatccgatgagaact 69488

                                                                         
Query: 734   gtgaagggcgctccgtcagcccttgccgctaacaagcgaaaaagagaggacaccaagaag 793
             || ||||| ||||| || ||| |||| | ||||||| ||||||||||||||  |   |||
Sbjct: 69487 gtaaagggtgctccatccgccattgctgttaacaagagaaaaagagaggacggc---aag 69431

                                                                         
Query: 794   cccaaggtggtttccaaggaggaggaggcggcactcagagcacgggaagcagcgaggaaa 853
             ||||| ||| | || ||||||||||| || || || | ||| || |||||||| || |||
Sbjct: 69430 cccaaagtgatctcaaaggaggaggaagccgcccttaaagcgcgtgaagcagcaagaaaa 69371

                                                     
Query: 854   agagtggaggacagggagaagcctctcatgggattataca 893
             ||| ||||||| |||||||||||  | |||||| ||||||
Sbjct: 69370 agaatggaggatagggagaagcccttaatgggactataca 69331



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                         
Query: 460   aggatgggtatttgactcaacttcaggatattattatgataagtctactggactttacta 519
             |||||||| ||| ||||| ||||||||||| |||||||| || ||||||||||| || | 
Sbjct: 69862 aggatgggaattcgactctacttcaggatactattatgacaaatctactggactctattt 69803

                                                    
Query: 520   cgactcgaactctggtttctattattccgacggattagg 558
              ||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 69802 tgactcaaattctggtttctactattctgacggtttagg 69764



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 380   aaagctaaaaagagttaccaaaaagatttggagaa 414
             |||||||||||||| |||||||||||||| |||||
Sbjct: 71169 aaagctaaaaagagctaccaaaaagatttagagaa 71135



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>dbj|AK061707.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F06, full
           insert sequence
          Length = 559

 Score = 99.6 bits (50), Expect = 2e-17
 Identities = 178/220 (80%), Gaps = 3/220 (1%)
 Strand = Plus / Plus

                                                                       
Query: 674 attaaaggagggccagccccaggtgtggttgtcacgaaacaactgaacccgatgagacct 733
           |||||||| || | ||| |||||| |||| |||| ||||| |||||| ||||||||| ||
Sbjct: 34  attaaagggggccaagctccaggtttggtcgtcaagaaaccactgaatccgatgagaact 93

                                                                       
Query: 734 gtgaagggcgctccgtcagcccttgccgctaacaagcgaaaaagagaggacaccaagaag 793
           || ||||| ||||| || ||| |||| | ||||||| ||||||||||||||  |   |||
Sbjct: 94  gtaaagggtgctccatccgccattgctgttaacaagagaaaaagagaggacggc---aag 150

                                                                       
Query: 794 cccaaggtggtttccaaggaggaggaggcggcactcagagcacgggaagcagcgaggaaa 853
           ||||| ||| | || ||||||||||| || || || | ||| || |||||||| || |||
Sbjct: 151 cccaaagtgatctcaaaggaggaggaagccgcccttaaagcgcgtgaagcagcaagaaaa 210

                                                   
Query: 854 agagtggaggacagggagaagcctctcatgggattataca 893
           ||| ||||||| |||||||||||  | |||||| ||||||
Sbjct: 211 agaatggaggatagggagaagcccttaatgggactataca 250



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>ref|NM_103847.3| Arabidopsis thaliana nucleic acid binding / zinc ion binding
           (AT1G49590) mRNA, complete cds
          Length = 1139

 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 167 gccatgactgagtattgggtgagccaaggaaacaaatggtg 207
           |||||||||||||||||||| || ||||| |||||||||||
Sbjct: 175 gccatgactgagtattgggtaagtcaagggaacaaatggtg 215



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>emb|BX813576.1|CNS0ACD1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB25ZD09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1330

 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 167 gccatgactgagtattgggtgagccaaggaaacaaatggtg 207
           |||||||||||||||||||| || ||||| |||||||||||
Sbjct: 114 gccatgactgagtattgggtaagtcaagggaacaaatggtg 154



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>emb|BX813573.1|CNS0ACBW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB25ZC09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1333

 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 167 gccatgactgagtattgggtgagccaaggaaacaaatggtg 207
           |||||||||||||||||||| || ||||| |||||||||||
Sbjct: 114 gccatgactgagtattgggtaagtcaagggaacaaatggtg 154



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>gb|BT010196.1| Arabidopsis thaliana At1g49590 gene, complete cds
          Length = 729

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 170 atgactgagtattgggtgagccaaggaaacaaatggtg 207
           ||||||||||||||||| || ||||| |||||||||||
Sbjct: 1   atgactgagtattgggtaagtcaagggaacaaatggtg 38



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>emb|BX816601.1|CNS0ABK8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH58ZC06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1432

 Score = 50.1 bits (25), Expect = 0.018
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 167 gccatgactgagtattgggtgagccaaggaaacaaatggtg 207
           ||||||||||| |||||||| || ||||| |||||||||||
Sbjct: 104 gccatgactgattattgggtaagtcaagggaacaaatggtg 144



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>gb|AC151621.20| Medicago truncatula clone mth2-14p3, complete sequence
          Length = 126611

 Score = 48.1 bits (24), Expect = 0.072
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                         
Query: 177   agtattgggtgagccaaggaaacaaatggtgcgacttgtgcaaaatctttatatctaaca 236
             |||| ||||| || || |||||||||||||||||  |||||||||| |  ||||| ||||
Sbjct: 78368 agtactgggtaagtcagggaaacaaatggtgcgatgtgtgcaaaatttacatatcaaaca 78427

                             
Query: 237   atccgttcagcatcag 252
             | || | |||||||||
Sbjct: 78428 acccttccagcatcag 78443



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>emb|CT737339.6| Pig DNA sequence from clone CH242-154E22 on chromosome 14, complete
             sequence
          Length = 136991

 Score = 46.1 bits (23), Expect = 0.28
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 392   agttaccaaaaagatttggagaa 414
             |||||||||||||||||||||||
Sbjct: 99121 agttaccaaaaagatttggagaa 99099



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>gb|AC160395.2| Mus musculus BAC clone RP23-36C19 from chromosome 12, complete sequence
          Length = 207840

 Score = 46.1 bits (23), Expect = 0.28
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 850    gaaaagagtggaggacagggaga 872
              |||||||||||||||||||||||
Sbjct: 129705 gaaaagagtggaggacagggaga 129727



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>gb|AC161493.6| Mus musculus chromosome 1, clone RP24-77I21, complete sequence
          Length = 226794

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1044  acatgtatgcattgtacaatac 1065
             ||||||||||||||||||||||
Sbjct: 45429 acatgtatgcattgtacaatac 45450



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>ref|XM_729219.1| Plasmodium chabaudi chabaudi hypothetical protein (PC405185.00.0)
            partial mRNA
          Length = 312

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1044 acatgtatgcattgtacaatac 1065
            ||||||||||||||||||||||
Sbjct: 38   acatgtatgcattgtacaatac 17



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>gb|U66590.1|HSU66590 Human ribosomal protein L5 pseudogene mRNA, partial cds
          Length = 910

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 38 cgcctccccctccccgaccgcc 59
          ||||||||||||||||||||||
Sbjct: 21 cgcctccccctccccgaccgcc 42



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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 693     caggtgtggttgtcacgaaaca 714
               ||||||||||||||||||||||
Sbjct: 1472770 caggtgtggttgtcacgaaaca 1472791



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>gb|AC139376.3| Mus musculus BAC clone RP24-420A20 from chromosome 10, complete sequence
          Length = 184039

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 405    atttggagaataaccagagaa 425
              |||||||||||||||||||||
Sbjct: 128396 atttggagaataaccagagaa 128376



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>gb|AC135962.4| Mus musculus BAC clone RP23-342H15 from chromosome 16, complete
             sequence
          Length = 202525

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1047  tgtatgcattgtacaatacct 1067
             |||||||||||||||||||||
Sbjct: 24930 tgtatgcattgtacaatacct 24910



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>gb|AC124681.3| Mus musculus BAC clone RP24-261H7 from chromosome 16, complete sequence
          Length = 173837

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1047   tgtatgcattgtacaatacct 1067
              |||||||||||||||||||||
Sbjct: 152050 tgtatgcattgtacaatacct 152030



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>gb|AC099742.2| Papio anubis clone RP41-167P22, complete sequence
          Length = 171612

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 215   tgcaaaatctttatatctaacaatc 239
             ||||||||||||| |||||||||||
Sbjct: 71795 tgcaaaatctttaaatctaacaatc 71771



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>emb|BX511223.6| Zebrafish DNA sequence from clone DKEYP-96B6 in linkage group 14,
             complete sequence
          Length = 190254

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 847   gaggaaaagagtggaggacag 867
             |||||||||||||||||||||
Sbjct: 45289 gaggaaaagagtggaggacag 45269



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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    gcctccccctccccgaccgcc 59
             |||||||||||||||||||||
Sbjct: 65219 gcctccccctccccgaccgcc 65199



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>emb|AL713920.14| Mouse DNA sequence from clone RP23-330B20 on chromosome X, complete
              sequence
          Length = 156186

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 185    gtgagccaaggaaacaaatgg 205
              |||||||||||||||||||||
Sbjct: 137963 gtgagccaaggaaacaaatgg 137943


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 203,849,359
Number of extensions: 11823498
Number of successful extensions: 233647
Number of sequences better than 10.0: 26
Number of HSP's gapped: 233633
Number of HSP's successfully gapped: 43
Length of query: 1165
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1142
Effective length of database: 18,503,978,556
Effective search space: 21131543510952
Effective search space used: 21131543510952
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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