ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf45h19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001051187.1| Oryza sativa (japonica cultivar-group) Os01g0822200 (Os01g0822200) mRNA, complete cds Length = 2134 Score = 1045 bits (527), Expect = 0.0 Identities = 1180/1397 (84%), Gaps = 3/1397 (0%) Strand = Plus / Plus Query: 250 agacttccggagcccgaagctcatgtgccatctttgcagtcagcgcctcctagtttcagg 309 ||||| || ||||| ||||| ||||||||||| || || || || ||||||||||| ||| Sbjct: 316 agactcccagagccagaagcgcatgtgccatcgttacaatctgctcctcctagttttagg 375 Query: 310 gacagggcaaagatctgccaatcggccaataaagtctcttacagcagggcacgtgtgctg 369 ||| ||| || ||| |||||||| || |||| ||||||||||| || || |||||| Sbjct: 376 aacaaggctaaaatccaccaatcggaaaagaaagcttcttacagcagagcgcgcgtgctg 435 Query: 370 tctgctccctcgagcctgattctggttgatcaggatggccttccgtatgctgagttcgat 429 |||||||| || ||||| ||| |||||||||||||||| ||||| ||||| || |||||| Sbjct: 436 tctgctccttccagcctaattgtggttgatcaggatggtcttccatatgccgaattcgat 495 Query: 430 gatcaggatgactctaggggcaagggaggagctattaaggcacatcgtttttcaaatccg 489 ||||| |||||||| |||||||||||||| |||| |||| || ||||| || ||||| Sbjct: 496 gatcaagatgactccaggggcaagggaggttctataaagggccaccgtttctctaatcca 555 Query: 490 ctgccgcttcctcttccctcaccagaaggcagttctttgaggaactttggtagcttcaag 549 ||||| |||||||| || ||||||||||| | || |||||||||||||| |||||||| Sbjct: 556 ctgccccttcctctcccatcaccagaaggaaaatcattgaggaactttggcagcttcaaa 615 Query: 550 gctatcaatgcaagtgggccacttgaagtttcaggtcctctcccactgcctccaaagagg 609 || |||||||||||||| ||||| || | |||||| ||||| ||||| |||||||||| | Sbjct: 616 gccatcaatgcaagtggaccactcgatgcttcaggccctctgccacttcctccaaagaag 675 Query: 610 tccgaggggcttaagaacttctcgtacgatgagatttccactgcttgccagtggttttct 669 | || ||||||||||| ||||| || || || |||| | |||||||| ||||||||| Sbjct: 676 tgtgatgggcttaagaatttctcctatgaggaactttcatcagcttgccaatggttttct 735 Query: 670 ggcgatcatcgtgtctcagaaactctgacttcgacatcatacaaggcattgttcagggat 729 || || || |||| || |||| | |||| || |||||||||||||| | || |||||| Sbjct: 736 ggtgaccagtgtgtttccgaaagtttgacatcaacatcatacaaggcgtcctttagggat 795 Query: 730 gatttcgttgaaccaaagaagatggaagcaatagtagccaggttactcccttccaatcag 789 ||||| || ||||||| || |||||||||||| | |||| ||| | |||| |||| Sbjct: 796 gattttaccgacccaaagaccattgaagcaatagtatctcggttgctctcctccactcag 855 Query: 790 agtttcaaagaatttaaggcacaagtaaatacgttggcatcacttcaacatcccaattta 849 ||||| ||||| ||||| ||||||| ||||| |||||||||||||| |||||||| ||| Sbjct: 856 agtttgaaagagtttaaaacacaagtgaataccttggcatcacttcagcatcccaactta 915 Query: 850 tgtaaactcatcggctatcacgcaagagaagaatctaatgaaaggatgttggtctatgag 909 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 916 tgtaaactaatcggctttcacgcaagagaagaatctaatgaaaggatgttggtctatgag 975 Query: 910 cggctccatcatggcagtttagacaggttactctttggaagaccggaaggtcgtttcatg 969 || |||||||||||||| ||||| | |||||||||||||| |||| |||||||||||| Sbjct: 976 cgactccatcatggcagcttagataaactactctttggaagatcggatggtcgtttcatg 1035 Query: 970 gactggtctacacgtttgaaggttgcccttggtgctgctaaaggtctagctttcctacat 1029 |||||||| |||||||||||||||| ||||||||||||| ||| || |||||||||||| Sbjct: 1036 gactggtcagcacgtttgaaggttgctcttggtgctgctagaggcctggctttcctacat 1095 Query: 1030 gatgaaggaccctttcaggcaatgtatgatgacttctcaacgtcaaacatccaaatagag 1089 |||||||| || |||||||| ||||| ||||||||||||| |||||||||||||| || Sbjct: 1096 gatgaagggccttttcaggccatgtacaatgacttctcaacctcaaacatccaaattgac 1155 Query: 1090 aaagatttcactgcaaagctgtcgggatatggttgtgttggcttcaattctgacgaggaa 1149 |||||||||||||||||||| || |||||||| |||||||| |||||| | || |||||| Sbjct: 1156 aaagatttcactgcaaagctatcaggatatggatgtgttggattcaataccgaggaggaa 1215 Query: 1150 agatccaaggcatctgtg---gctgcaaacctctcagaggaaaccttggagaaaggcgta 1206 | ||| || ||||||||| |||||||||||||||| |||||||||||||||||| ||| Sbjct: 1216 atatcaaatgcatctgtggctgctgcaaacctctcagtggaaaccttggagaaaggtgta 1275 Query: 1207 ctaactccgaagagcaacgtatggagctttggagttgtcttgctcgagctaataacagga 1266 || ||||| ||||||||||||||| |||||||||||||| |||| ||||||||||||||| Sbjct: 1276 ctgactcccaagagcaacgtatggtgctttggagttgtcctgctggagctaataacagga 1335 Query: 1267 cggaagaacctcgatgtacgttccaccaaagaagaacgtaatattgtcaagtggggtagg 1326 |||||||||| ||||| |||||| | ||||||||||| ||||||||||||||| ||||| Sbjct: 1336 aggaagaaccttgatgtccgttcctcaaaagaagaacgcaatattgtcaagtggagtagg 1395 Query: 1327 cctttcctcaccgacgatagtcgtctatccctcatcatggatccccgtataaaaggacgc 1386 |||||||||||||| |||||||| ||||| | |||||||| ||||||||||||||||| Sbjct: 1396 cctttcctcaccgatgatagtcgcctatcgttaatcatggactcccgtataaaaggacgc 1455 Query: 1387 tttcctaccaaggctgctcgaactgtggcagacataattctgaagtgccttcaaagagat 1446 || ||||||||||||||||| | ||| ||||| || || ||| |||||| | | |||| Sbjct: 1456 ttccctaccaaggctgctcggattgtagcagatatcatattgagatgccttaataaagat 1515 Query: 1447 ccatcagaaaggcctacgatgagggccgtcgtggaggccctaacaagcgttcaggacata 1506 |||||||| |||||||| ||||||||||| |||||| ||||| ||||||| ||||||||| Sbjct: 1516 ccatcagagaggcctaccatgagggccgttgtggagtccctagcaagcgtccaggacata 1575 Query: 1507 aaggtcccctgccggtatcctcttcaagtaccgtccgccgcaccgaggaaagtgatgcta 1566 ||||| || || || |||||| | |||| || || || || || || || |||||| || Sbjct: 1576 aaggttccatgtcgatatcctttgcaagagccatctgctgccccaagaaaggtgatgtta 1635 Query: 1567 aagtctacgagcctcaatggcattgttcctcagcatcccgtcatgaccttctcgccgtcg 1626 || ||||| || ||||||||||| ||| ||| ||||| ||| | |||||||| ||||| Sbjct: 1636 aaatctacaagtctcaatggcatcattcatcaccatcctgtcgtaaccttctcaccgtca 1695 Query: 1627 cctccttcgcgcaacca 1643 ||||||||||| ||||| Sbjct: 1696 cctccttcgcgaaacca 1712 Score = 60.0 bits (30), Expect = 3e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 157 atgatgggctgcttcactggcctgaggtccaagaagaagaag 198 |||||||| |||||||||| |||||| ||||||||||||||| Sbjct: 223 atgatgggttgcttcactgtcctgagatccaagaagaagaag 264 Score = 54.0 bits (27), Expect = 0.002 Identities = 72/87 (82%) Strand = Plus / Plus Query: 1714 ctggattaccccagggtaagctcggtcaagaagtcgccttccggtatcctgcggagacct 1773 |||||| |||| || |||||||| ||||||| ||||||||| ||| | |||||| || Sbjct: 1774 ctggatgaccctagagtaagctctatcaagaaatcgccttcccctattttacggagatct 1833 Query: 1774 ggcgtcgaaggtttttgattgtccata 1800 || || || |||||||||||||||||| Sbjct: 1834 ggtgttgagggtttttgattgtccata 1860
>dbj|AK103249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123M05, full insert sequence Length = 2136 Score = 1037 bits (523), Expect = 0.0 Identities = 1179/1397 (84%), Gaps = 3/1397 (0%) Strand = Plus / Plus Query: 250 agacttccggagcccgaagctcatgtgccatctttgcagtcagcgcctcctagtttcagg 309 ||||| || ||||| ||||| ||||||||||| || || || || ||||||||||| ||| Sbjct: 318 agactcccagagccagaagcgcatgtgccatcgttacaatctgctcctcctagttttagg 377 Query: 310 gacagggcaaagatctgccaatcggccaataaagtctcttacagcagggcacgtgtgctg 369 ||| ||| || ||| |||||||| || |||| ||||||||||| || || |||||| Sbjct: 378 aacaaggctaaaatccaccaatcggaaaagaaagcttcttacagcagagcgcgcgtgctg 437 Query: 370 tctgctccctcgagcctgattctggttgatcaggatggccttccgtatgctgagttcgat 429 |||||||| || ||||| ||| |||||||||||||||| ||||| ||||| || |||||| Sbjct: 438 tctgctccttccagcctaattgtggttgatcaggatggtcttccatatgccgaattcgat 497 Query: 430 gatcaggatgactctaggggcaagggaggagctattaaggcacatcgtttttcaaatccg 489 ||||| |||||||| |||||||||||||| |||| |||| || ||||| || ||||| Sbjct: 498 gatcaagatgactccaggggcaagggaggttctataaagggccaccgtttctctaatcca 557 Query: 490 ctgccgcttcctcttccctcaccagaaggcagttctttgaggaactttggtagcttcaag 549 ||||| |||||||| || ||||||||||| | | |||||||||||||| |||||||| Sbjct: 558 ctgccccttcctctcccatcaccagaaggaaaattattgaggaactttggcagcttcaaa 617 Query: 550 gctatcaatgcaagtgggccacttgaagtttcaggtcctctcccactgcctccaaagagg 609 || |||||||||||||| ||||| || | |||||| ||||| ||||| |||||||||| | Sbjct: 618 gccatcaatgcaagtggaccactcgatgcttcaggccctctgccacttcctccaaagaag 677 Query: 610 tccgaggggcttaagaacttctcgtacgatgagatttccactgcttgccagtggttttct 669 | || ||||||||||| ||||| || || || |||| | |||||||| ||||||||| Sbjct: 678 tgtgatgggcttaagaatttctcctatgaggaactttcatcagcttgccaatggttttct 737 Query: 670 ggcgatcatcgtgtctcagaaactctgacttcgacatcatacaaggcattgttcagggat 729 || || || |||| || |||| | |||| || |||||||||||||| | || |||||| Sbjct: 738 ggtgaccagtgtgtttccgaaagtttgacatcaacatcatacaaggcgtcctttagggat 797 Query: 730 gatttcgttgaaccaaagaagatggaagcaatagtagccaggttactcccttccaatcag 789 ||||| || ||||||| || |||||||||||| | |||| ||| | |||| |||| Sbjct: 798 gattttaccgacccaaagaccattgaagcaatagtatctcggttgctctcctccactcag 857 Query: 790 agtttcaaagaatttaaggcacaagtaaatacgttggcatcacttcaacatcccaattta 849 ||||| ||||| ||||| ||||||| ||||| |||||||||||||| |||||||| ||| Sbjct: 858 agtttgaaagagtttaaaacacaagtgaataccttggcatcacttcagcatcccaactta 917 Query: 850 tgtaaactcatcggctatcacgcaagagaagaatctaatgaaaggatgttggtctatgag 909 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 918 tgtaaactaatcggctttcacgcaagagaagaatctaatgaaaggatgttggtctatgag 977 Query: 910 cggctccatcatggcagtttagacaggttactctttggaagaccggaaggtcgtttcatg 969 || |||||||||||||| ||||| | |||||||||||||| |||| |||||||||||| Sbjct: 978 cgactccatcatggcagcttagataaactactctttggaagatcggatggtcgtttcatg 1037 Query: 970 gactggtctacacgtttgaaggttgcccttggtgctgctaaaggtctagctttcctacat 1029 |||||||| |||||||||||||||| ||||||||||||| ||| || |||||||||||| Sbjct: 1038 gactggtcagcacgtttgaaggttgctcttggtgctgctagaggcctggctttcctacat 1097 Query: 1030 gatgaaggaccctttcaggcaatgtatgatgacttctcaacgtcaaacatccaaatagag 1089 |||||||| || |||||||| ||||| ||||||||||||| |||||||||||||| || Sbjct: 1098 gatgaagggccttttcaggccatgtacaatgacttctcaacctcaaacatccaaattgac 1157 Query: 1090 aaagatttcactgcaaagctgtcgggatatggttgtgttggcttcaattctgacgaggaa 1149 |||||||||||||||||||| || |||||||| |||||||| |||||| | || |||||| Sbjct: 1158 aaagatttcactgcaaagctatcaggatatggatgtgttggattcaataccgaggaggaa 1217 Query: 1150 agatccaaggcatctgtg---gctgcaaacctctcagaggaaaccttggagaaaggcgta 1206 | ||| || ||||||||| |||||||||||||||| |||||||||||||||||| ||| Sbjct: 1218 atatcaaatgcatctgtggctgctgcaaacctctcagtggaaaccttggagaaaggtgta 1277 Query: 1207 ctaactccgaagagcaacgtatggagctttggagttgtcttgctcgagctaataacagga 1266 || ||||| ||||||||||||||| |||||||||||||| |||| ||||||||||||||| Sbjct: 1278 ctgactcccaagagcaacgtatggtgctttggagttgtcctgctggagctaataacagga 1337 Query: 1267 cggaagaacctcgatgtacgttccaccaaagaagaacgtaatattgtcaagtggggtagg 1326 |||||||||| ||||| |||||| | ||||||||||| ||||||||||||||| ||||| Sbjct: 1338 aggaagaaccttgatgtccgttcctcaaaagaagaacgcaatattgtcaagtggagtagg 1397 Query: 1327 cctttcctcaccgacgatagtcgtctatccctcatcatggatccccgtataaaaggacgc 1386 |||||||||||||| |||||||| ||||| | |||||||| ||||||||||||||||| Sbjct: 1398 cctttcctcaccgatgatagtcgcctatcgttaatcatggactcccgtataaaaggacgc 1457 Query: 1387 tttcctaccaaggctgctcgaactgtggcagacataattctgaagtgccttcaaagagat 1446 || ||||||||||||||||| | ||| ||||| || || ||| |||||| | | |||| Sbjct: 1458 ttccctaccaaggctgctcggattgtagcagatatcatattgagatgccttaataaagat 1517 Query: 1447 ccatcagaaaggcctacgatgagggccgtcgtggaggccctaacaagcgttcaggacata 1506 |||||||| |||||||| ||||||||||| |||||| ||||| ||||||| ||||||||| Sbjct: 1518 ccatcagagaggcctaccatgagggccgttgtggagtccctagcaagcgtccaggacata 1577 Query: 1507 aaggtcccctgccggtatcctcttcaagtaccgtccgccgcaccgaggaaagtgatgcta 1566 ||||| || || || |||||| | |||| || || || || || || || |||||| || Sbjct: 1578 aaggttccatgtcgatatcctttgcaagagccatctgctgccccaagaaaggtgatgtta 1637 Query: 1567 aagtctacgagcctcaatggcattgttcctcagcatcccgtcatgaccttctcgccgtcg 1626 || ||||| || ||||||||||| ||| ||| ||||| ||| | |||||||| ||||| Sbjct: 1638 aaatctacaagtctcaatggcatcattcatcaccatcctgtcgtaaccttctcaccgtca 1697 Query: 1627 cctccttcgcgcaacca 1643 ||||||||||| ||||| Sbjct: 1698 cctccttcgcgaaacca 1714 Score = 60.0 bits (30), Expect = 3e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 157 atgatgggctgcttcactggcctgaggtccaagaagaagaag 198 |||||||| |||||||||| |||||| ||||||||||||||| Sbjct: 225 atgatgggttgcttcactgtcctgagatccaagaagaagaag 266 Score = 48.1 bits (24), Expect = 0.13 Identities = 60/72 (83%) Strand = Plus / Plus Query: 1729 gtaagctcggtcaagaagtcgccttccggtatcctgcggagacctggcgtcgaaggtttt 1788 |||||||| ||||||| ||||||||| ||| | |||||| |||| || || |||||| Sbjct: 1791 gtaagctctatcaagaaatcgccttcccctattttacggagatctggtgttgagggtttt 1850 Query: 1789 tgattgtccata 1800 |||||||||||| Sbjct: 1851 tgattgtccata 1862
>emb|CT830834.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA116I02, full insert sequence Length = 1334 Score = 664 bits (335), Expect = 0.0 Identities = 773/919 (84%) Strand = Plus / Plus Query: 250 agacttccggagcccgaagctcatgtgccatctttgcagtcagcgcctcctagtttcagg 309 ||||| || ||||| ||||| ||||||||||| || || || || ||||||||||| ||| Sbjct: 245 agactcccagagccagaagcgcatgtgccatcgttacaatctgctcctcctagttttagg 304 Query: 310 gacagggcaaagatctgccaatcggccaataaagtctcttacagcagggcacgtgtgctg 369 ||| ||| || ||| |||||||| || |||| ||||||||||| || || |||||| Sbjct: 305 aacaaggctaaaatccaccaatcggaaaagaaagcttcttacagcagagcgcgcgtgctg 364 Query: 370 tctgctccctcgagcctgattctggttgatcaggatggccttccgtatgctgagttcgat 429 |||||||| || ||||| ||| |||||||||||||||| ||||| ||||| || |||||| Sbjct: 365 tctgctccttccagcctaattgtggttgatcaggatggtcttccatatgccgaattcgat 424 Query: 430 gatcaggatgactctaggggcaagggaggagctattaaggcacatcgtttttcaaatccg 489 ||||| |||||||| |||||||||||||| |||| |||| || ||||| || ||||| Sbjct: 425 gatcaagatgactccaggggcaagggaggttctataaagggccaccgtttctctaatcca 484 Query: 490 ctgccgcttcctcttccctcaccagaaggcagttctttgaggaactttggtagcttcaag 549 ||||| |||||||| || ||||||||||| | || |||||||||||||| |||||||| Sbjct: 485 ctgccccttcctctcccatcaccagaaggaaaatcattgaggaactttggcagcttcaaa 544 Query: 550 gctatcaatgcaagtgggccacttgaagtttcaggtcctctcccactgcctccaaagagg 609 || |||||||||||||| ||||| || | |||||| ||||| ||||| |||||||||| | Sbjct: 545 gccatcaatgcaagtggaccactcgatgcttcaggccctctgccacttcctccaaagaag 604 Query: 610 tccgaggggcttaagaacttctcgtacgatgagatttccactgcttgccagtggttttct 669 | || ||||||||||| ||||| || || || |||| | |||||||| ||||||||| Sbjct: 605 tgtgatgggcttaagaatttctcctatgaggaactttcatcagcttgccaatggttttct 664 Query: 670 ggcgatcatcgtgtctcagaaactctgacttcgacatcatacaaggcattgttcagggat 729 || || || |||| || |||| | |||| || |||||||||||||| | || |||||| Sbjct: 665 ggtgaccagtgtgtttccgaaagtttgacatcaacatcatacaaggcgtcctttagggat 724 Query: 730 gatttcgttgaaccaaagaagatggaagcaatagtagccaggttactcccttccaatcag 789 ||||| || ||||||| || |||||||||||| | |||| ||| | |||| |||| Sbjct: 725 gattttaccgacccaaagaccattgaagcaatagtatctcggttgctctcctccactcag 784 Query: 790 agtttcaaagaatttaaggcacaagtaaatacgttggcatcacttcaacatcccaattta 849 ||||| ||||| ||||| ||||||| ||||| |||||||||||||| |||||||| ||| Sbjct: 785 agtttgaaagagtttaaaacacaagtgaataccttggcatcacttcagcatcccaactta 844 Query: 850 tgtaaactcatcggctatcacgcaagagaagaatctaatgaaaggatgttggtctatgag 909 |||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 845 tgtaaactaattggctttcacgcaagagaagaatctaatgaaaggatgttggtctatgag 904 Query: 910 cggctccatcatggcagtttagacaggttactctttggaagaccggaaggtcgtttcatg 969 || |||||||||||||| ||||| | |||||||||||||| |||| |||||||||||| Sbjct: 905 cgactccatcatggcagcttagataaactactctttggaagatcggatggtcgtttcatg 964 Query: 970 gactggtctacacgtttgaaggttgcccttggtgctgctaaaggtctagctttcctacat 1029 |||||||| |||||||||||||||| ||||||||||||| ||| || |||||||||||| Sbjct: 965 gactggtcagcacgtttgaaggttgctcttggtgctgctagaggcctggctttcctacat 1024 Query: 1030 gatgaaggaccctttcaggcaatgtatgatgacttctcaacgtcaaacatccaaatagag 1089 |||||||| || |||||||| ||||| ||||||||||||| |||||||||||||| || Sbjct: 1025 gatgaagggccttttcaggccatgtacaatgacttctcaacctcaaacatccaaattgac 1084 Query: 1090 aaagatttcactgcaaagctgtcgggatatggttgtgttggcttcaattctgacgaggaa 1149 |||||||||||||||||||| || |||||||| |||||||| |||||| | || |||||| Sbjct: 1085 aaagatttcactgcaaagctatcaggatatggatgtgttggattcaataccgaggaggaa 1144 Query: 1150 agatccaaggcatctgtgg 1168 | ||| || |||||||||| Sbjct: 1145 atatcaaatgcatctgtgg 1163 Score = 60.0 bits (30), Expect = 3e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 157 atgatgggctgcttcactggcctgaggtccaagaagaagaag 198 |||||||| |||||||||| |||||| ||||||||||||||| Sbjct: 152 atgatgggttgcttcactgtcctgagatccaagaagaagaag 193
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 396 bits (200), Expect = e-106 Identities = 407/476 (85%) Strand = Plus / Minus Query: 1168 gctgcaaacctctcagaggaaaccttggagaaaggcgtactaactccgaagagcaacgta 1227 |||||||||||||||| |||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 35090333 gctgcaaacctctcagtggaaaccttggagaaaggtgtactgactcccaagagcaacgta 35090274 Query: 1228 tggagctttggagttgtcttgctcgagctaataacaggacggaagaacctcgatgtacgt 1287 ||| |||||||||||||| |||| ||||||||||||||| |||||||||| ||||| ||| Sbjct: 35090273 tggtgctttggagttgtcctgctggagctaataacaggaaggaagaaccttgatgtccgt 35090214 Query: 1288 tccaccaaagaagaacgtaatattgtcaagtggggtaggcctttcctcaccgacgatagt 1347 ||| | ||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 35090213 tcctcaaaagaagaacgcaatattgtcaagtggagtaggcctttcctcaccgatgatagt 35090154 Query: 1348 cgtctatccctcatcatggatccccgtataaaaggacgctttcctaccaaggctgctcga 1407 || ||||| | |||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 35090153 cgcctatcgttaatcatggactcccgtataaaaggacgcttccctaccaaggctgctcgg 35090094 Query: 1408 actgtggcagacataattctgaagtgccttcaaagagatccatcagaaaggcctacgatg 1467 | ||| ||||| || || ||| |||||| | | |||||||||||| |||||||| ||| Sbjct: 35090093 attgtagcagatatcatattgagatgccttaataaagatccatcagagaggcctaccatg 35090034 Query: 1468 agggccgtcgtggaggccctaacaagcgttcaggacataaaggtcccctgccggtatcct 1527 |||||||| |||||| ||||| ||||||| |||||||||||||| || || || |||||| Sbjct: 35090033 agggccgttgtggagtccctagcaagcgtccaggacataaaggttccatgtcgatatcct 35089974 Query: 1528 cttcaagtaccgtccgccgcaccgaggaaagtgatgctaaagtctacgagcctcaatggc 1587 | |||| || || || || || || || |||||| |||| ||||| || ||||||||| Sbjct: 35089973 ttgcaagagccatctgctgccccaagaaaggtgatgttaaaatctacaagtctcaatggc 35089914 Query: 1588 attgttcctcagcatcccgtcatgaccttctcgccgtcgcctccttcgcgcaacca 1643 || ||| ||| ||||| ||| | |||||||| ||||| ||||||||||| ||||| Sbjct: 35089913 atcattcatcaccatcctgtcgtaaccttctcaccgtcacctccttcgcgaaacca 35089858 Score = 313 bits (158), Expect = 1e-81 Identities = 236/262 (90%) Strand = Plus / Minus Query: 787 cagagtttcaaagaatttaaggcacaagtaaatacgttggcatcacttcaacatcccaat 846 |||||||| ||||| ||||| ||||||| ||||| |||||||||||||| |||||||| Sbjct: 35091111 cagagtttgaaagagtttaaaacacaagtgaataccttggcatcacttcagcatcccaac 35091052 Query: 847 ttatgtaaactcatcggctatcacgcaagagaagaatctaatgaaaggatgttggtctat 906 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 35091051 ttatgtaaactaatcggctttcacgcaagagaagaatctaatgaaaggatgttggtctat 35090992 Query: 907 gagcggctccatcatggcagtttagacaggttactctttggaagaccggaaggtcgtttc 966 ||||| |||||||||||||| ||||| | |||||||||||||| |||| ||||||||| Sbjct: 35090991 gagcgactccatcatggcagcttagataaactactctttggaagatcggatggtcgtttc 35090932 Query: 967 atggactggtctacacgtttgaaggttgcccttggtgctgctaaaggtctagctttccta 1026 ||||||||||| |||||||||||||||| ||||||||||||| ||| || ||||||||| Sbjct: 35090931 atggactggtcagcacgtttgaaggttgctcttggtgctgctagaggcctggctttccta 35090872 Query: 1027 catgatgaaggaccctttcagg 1048 ||||||||||| || ||||||| Sbjct: 35090871 catgatgaagggccttttcagg 35090850 Score = 264 bits (133), Expect = 1e-66 Identities = 397/485 (81%) Strand = Plus / Minus Query: 250 agacttccggagcccgaagctcatgtgccatctttgcagtcagcgcctcctagtttcagg 309 ||||| || ||||| ||||| ||||||||||| || || || || ||||||||||| ||| Sbjct: 35092473 agactcccagagccagaagcgcatgtgccatcgttacaatctgctcctcctagttttagg 35092414 Query: 310 gacagggcaaagatctgccaatcggccaataaagtctcttacagcagggcacgtgtgctg 369 ||| ||| || ||| |||||||| || |||| ||||||||||| || || |||||| Sbjct: 35092413 aacaaggctaaaatccaccaatcggaaaagaaagcttcttacagcagagcgcgcgtgctg 35092354 Query: 370 tctgctccctcgagcctgattctggttgatcaggatggccttccgtatgctgagttcgat 429 |||||||| || ||||| ||| |||||||||||||||| ||||| ||||| || |||||| Sbjct: 35092353 tctgctccttccagcctaattgtggttgatcaggatggtcttccatatgccgaattcgat 35092294 Query: 430 gatcaggatgactctaggggcaagggaggagctattaaggcacatcgtttttcaaatccg 489 ||||| |||||||| |||||||||||||| |||| |||| || ||||| || ||||| Sbjct: 35092293 gatcaagatgactccaggggcaagggaggttctataaagggccaccgtttctctaatcca 35092234 Query: 490 ctgccgcttcctcttccctcaccagaaggcagttctttgaggaactttggtagcttcaag 549 ||||| |||||||| || ||||||||||| | || |||||||||||||| |||||||| Sbjct: 35092233 ctgccccttcctctcccatcaccagaaggaaaatcattgaggaactttggcagcttcaaa 35092174 Query: 550 gctatcaatgcaagtgggccacttgaagtttcaggtcctctcccactgcctccaaagagg 609 || |||||||||||||| ||||| || | |||||| ||||| ||||| |||||||||| | Sbjct: 35092173 gccatcaatgcaagtggaccactcgatgcttcaggccctctgccacttcctccaaagaag 35092114 Query: 610 tccgaggggcttaagaacttctcgtacgatgagatttccactgcttgccagtggttttct 669 | || ||||||||||| ||||| || || || |||| | |||||||| ||||||||| Sbjct: 35092113 tgtgatgggcttaagaatttctcctatgaggaactttcatcagcttgccaatggttttct 35092054 Query: 670 ggcgatcatcgtgtctcagaaactctgacttcgacatcatacaaggcattgttcagggat 729 || || || |||| || |||| | |||| || |||||||||||||| | || |||||| Sbjct: 35092053 ggtgaccagtgtgtttccgaaagtttgacatcaacatcatacaaggcgtcctttagggat 35091994 Query: 730 gattt 734 ||||| Sbjct: 35091993 gattt 35091989 Score = 119 bits (60), Expect = 4e-23 Identities = 108/124 (87%) Strand = Plus / Minus Query: 1045 caggcaatgtatgatgacttctcaacgtcaaacatccaaatagagaaagatttcactgca 1104 ||||| ||||| ||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 35090718 caggccatgtacaatgacttctcaacctcaaacatccaaattgacaaagatttcactgca 35090659 Query: 1105 aagctgtcgggatatggttgtgttggcttcaattctgacgaggaaagatccaaggcatct 1164 ||||| || |||||||| |||||||| |||||| | || ||||||| ||| || |||||| Sbjct: 35090658 aagctatcaggatatggatgtgttggattcaataccgaggaggaaatatcaaatgcatct 35090599 Query: 1165 gtgg 1168 |||| Sbjct: 35090598 gtgg 35090595 Score = 60.0 bits (30), Expect = 3e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 157 atgatgggctgcttcactggcctgaggtccaagaagaagaag 198 |||||||| |||||||||| |||||| ||||||||||||||| Sbjct: 35092566 atgatgggttgcttcactgtcctgagatccaagaagaagaag 35092525 Score = 54.0 bits (27), Expect = 0.002 Identities = 72/87 (82%) Strand = Plus / Minus Query: 1714 ctggattaccccagggtaagctcggtcaagaagtcgccttccggtatcctgcggagacct 1773 |||||| |||| || |||||||| ||||||| ||||||||| ||| | |||||| || Sbjct: 35089796 ctggatgaccctagagtaagctctatcaagaaatcgccttcccctattttacggagatct 35089737 Query: 1774 ggcgtcgaaggtttttgattgtccata 1800 || || || |||||||||||||||||| Sbjct: 35089736 ggtgttgagggtttttgattgtccata 35089710
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485B12 Length = 156047 Score = 396 bits (200), Expect = e-106 Identities = 407/476 (85%) Strand = Plus / Minus Query: 1168 gctgcaaacctctcagaggaaaccttggagaaaggcgtactaactccgaagagcaacgta 1227 |||||||||||||||| |||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 97483 gctgcaaacctctcagtggaaaccttggagaaaggtgtactgactcccaagagcaacgta 97424 Query: 1228 tggagctttggagttgtcttgctcgagctaataacaggacggaagaacctcgatgtacgt 1287 ||| |||||||||||||| |||| ||||||||||||||| |||||||||| ||||| ||| Sbjct: 97423 tggtgctttggagttgtcctgctggagctaataacaggaaggaagaaccttgatgtccgt 97364 Query: 1288 tccaccaaagaagaacgtaatattgtcaagtggggtaggcctttcctcaccgacgatagt 1347 ||| | ||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 97363 tcctcaaaagaagaacgcaatattgtcaagtggagtaggcctttcctcaccgatgatagt 97304 Query: 1348 cgtctatccctcatcatggatccccgtataaaaggacgctttcctaccaaggctgctcga 1407 || ||||| | |||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 97303 cgcctatcgttaatcatggactcccgtataaaaggacgcttccctaccaaggctgctcgg 97244 Query: 1408 actgtggcagacataattctgaagtgccttcaaagagatccatcagaaaggcctacgatg 1467 | ||| ||||| || || ||| |||||| | | |||||||||||| |||||||| ||| Sbjct: 97243 attgtagcagatatcatattgagatgccttaataaagatccatcagagaggcctaccatg 97184 Query: 1468 agggccgtcgtggaggccctaacaagcgttcaggacataaaggtcccctgccggtatcct 1527 |||||||| |||||| ||||| ||||||| |||||||||||||| || || || |||||| Sbjct: 97183 agggccgttgtggagtccctagcaagcgtccaggacataaaggttccatgtcgatatcct 97124 Query: 1528 cttcaagtaccgtccgccgcaccgaggaaagtgatgctaaagtctacgagcctcaatggc 1587 | |||| || || || || || || || |||||| |||| ||||| || ||||||||| Sbjct: 97123 ttgcaagagccatctgctgccccaagaaaggtgatgttaaaatctacaagtctcaatggc 97064 Query: 1588 attgttcctcagcatcccgtcatgaccttctcgccgtcgcctccttcgcgcaacca 1643 || ||| ||| ||||| ||| | |||||||| ||||| ||||||||||| ||||| Sbjct: 97063 atcattcatcaccatcctgtcgtaaccttctcaccgtcacctccttcgcgaaacca 97008 Score = 313 bits (158), Expect = 1e-81 Identities = 236/262 (90%) Strand = Plus / Minus Query: 787 cagagtttcaaagaatttaaggcacaagtaaatacgttggcatcacttcaacatcccaat 846 |||||||| ||||| ||||| ||||||| ||||| |||||||||||||| |||||||| Sbjct: 98261 cagagtttgaaagagtttaaaacacaagtgaataccttggcatcacttcagcatcccaac 98202 Query: 847 ttatgtaaactcatcggctatcacgcaagagaagaatctaatgaaaggatgttggtctat 906 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 98201 ttatgtaaactaatcggctttcacgcaagagaagaatctaatgaaaggatgttggtctat 98142 Query: 907 gagcggctccatcatggcagtttagacaggttactctttggaagaccggaaggtcgtttc 966 ||||| |||||||||||||| ||||| | |||||||||||||| |||| ||||||||| Sbjct: 98141 gagcgactccatcatggcagcttagataaactactctttggaagatcggatggtcgtttc 98082 Query: 967 atggactggtctacacgtttgaaggttgcccttggtgctgctaaaggtctagctttccta 1026 ||||||||||| |||||||||||||||| ||||||||||||| ||| || ||||||||| Sbjct: 98081 atggactggtcagcacgtttgaaggttgctcttggtgctgctagaggcctggctttccta 98022 Query: 1027 catgatgaaggaccctttcagg 1048 ||||||||||| || ||||||| Sbjct: 98021 catgatgaagggccttttcagg 98000 Score = 264 bits (133), Expect = 1e-66 Identities = 397/485 (81%) Strand = Plus / Minus Query: 250 agacttccggagcccgaagctcatgtgccatctttgcagtcagcgcctcctagtttcagg 309 ||||| || ||||| ||||| ||||||||||| || || || || ||||||||||| ||| Sbjct: 99623 agactcccagagccagaagcgcatgtgccatcgttacaatctgctcctcctagttttagg 99564 Query: 310 gacagggcaaagatctgccaatcggccaataaagtctcttacagcagggcacgtgtgctg 369 ||| ||| || ||| |||||||| || |||| ||||||||||| || || |||||| Sbjct: 99563 aacaaggctaaaatccaccaatcggaaaagaaagcttcttacagcagagcgcgcgtgctg 99504 Query: 370 tctgctccctcgagcctgattctggttgatcaggatggccttccgtatgctgagttcgat 429 |||||||| || ||||| ||| |||||||||||||||| ||||| ||||| || |||||| Sbjct: 99503 tctgctccttccagcctaattgtggttgatcaggatggtcttccatatgccgaattcgat 99444 Query: 430 gatcaggatgactctaggggcaagggaggagctattaaggcacatcgtttttcaaatccg 489 ||||| |||||||| |||||||||||||| |||| |||| || ||||| || ||||| Sbjct: 99443 gatcaagatgactccaggggcaagggaggttctataaagggccaccgtttctctaatcca 99384 Query: 490 ctgccgcttcctcttccctcaccagaaggcagttctttgaggaactttggtagcttcaag 549 ||||| |||||||| || ||||||||||| | || |||||||||||||| |||||||| Sbjct: 99383 ctgccccttcctctcccatcaccagaaggaaaatcattgaggaactttggcagcttcaaa 99324 Query: 550 gctatcaatgcaagtgggccacttgaagtttcaggtcctctcccactgcctccaaagagg 609 || |||||||||||||| ||||| || | |||||| ||||| ||||| |||||||||| | Sbjct: 99323 gccatcaatgcaagtggaccactcgatgcttcaggccctctgccacttcctccaaagaag 99264 Query: 610 tccgaggggcttaagaacttctcgtacgatgagatttccactgcttgccagtggttttct 669 | || ||||||||||| ||||| || || || |||| | |||||||| ||||||||| Sbjct: 99263 tgtgatgggcttaagaatttctcctatgaggaactttcatcagcttgccaatggttttct 99204 Query: 670 ggcgatcatcgtgtctcagaaactctgacttcgacatcatacaaggcattgttcagggat 729 || || || |||| || |||| | |||| || |||||||||||||| | || |||||| Sbjct: 99203 ggtgaccagtgtgtttccgaaagtttgacatcaacatcatacaaggcgtcctttagggat 99144 Query: 730 gattt 734 ||||| Sbjct: 99143 gattt 99139 Score = 119 bits (60), Expect = 4e-23 Identities = 108/124 (87%) Strand = Plus / Minus Query: 1045 caggcaatgtatgatgacttctcaacgtcaaacatccaaatagagaaagatttcactgca 1104 ||||| ||||| ||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 97868 caggccatgtacaatgacttctcaacctcaaacatccaaattgacaaagatttcactgca 97809 Query: 1105 aagctgtcgggatatggttgtgttggcttcaattctgacgaggaaagatccaaggcatct 1164 ||||| || |||||||| |||||||| |||||| | || ||||||| ||| || |||||| Sbjct: 97808 aagctatcaggatatggatgtgttggattcaataccgaggaggaaatatcaaatgcatct 97749 Query: 1165 gtgg 1168 |||| Sbjct: 97748 gtgg 97745 Score = 60.0 bits (30), Expect = 3e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 157 atgatgggctgcttcactggcctgaggtccaagaagaagaag 198 |||||||| |||||||||| |||||| ||||||||||||||| Sbjct: 99716 atgatgggttgcttcactgtcctgagatccaagaagaagaag 99675 Score = 54.0 bits (27), Expect = 0.002 Identities = 72/87 (82%) Strand = Plus / Minus Query: 1714 ctggattaccccagggtaagctcggtcaagaagtcgccttccggtatcctgcggagacct 1773 |||||| |||| || |||||||| ||||||| ||||||||| ||| | |||||| || Sbjct: 96946 ctggatgaccctagagtaagctctatcaagaaatcgccttcccctattttacggagatct 96887 Query: 1774 ggcgtcgaaggtttttgattgtccata 1800 || || || |||||||||||||||||| Sbjct: 96886 ggtgttgagggtttttgattgtccata 96860
>dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0703B11 Length = 144074 Score = 396 bits (200), Expect = e-106 Identities = 407/476 (85%) Strand = Plus / Minus Query: 1168 gctgcaaacctctcagaggaaaccttggagaaaggcgtactaactccgaagagcaacgta 1227 |||||||||||||||| |||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 134561 gctgcaaacctctcagtggaaaccttggagaaaggtgtactgactcccaagagcaacgta 134502 Query: 1228 tggagctttggagttgtcttgctcgagctaataacaggacggaagaacctcgatgtacgt 1287 ||| |||||||||||||| |||| ||||||||||||||| |||||||||| ||||| ||| Sbjct: 134501 tggtgctttggagttgtcctgctggagctaataacaggaaggaagaaccttgatgtccgt 134442 Query: 1288 tccaccaaagaagaacgtaatattgtcaagtggggtaggcctttcctcaccgacgatagt 1347 ||| | ||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 134441 tcctcaaaagaagaacgcaatattgtcaagtggagtaggcctttcctcaccgatgatagt 134382 Query: 1348 cgtctatccctcatcatggatccccgtataaaaggacgctttcctaccaaggctgctcga 1407 || ||||| | |||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 134381 cgcctatcgttaatcatggactcccgtataaaaggacgcttccctaccaaggctgctcgg 134322 Query: 1408 actgtggcagacataattctgaagtgccttcaaagagatccatcagaaaggcctacgatg 1467 | ||| ||||| || || ||| |||||| | | |||||||||||| |||||||| ||| Sbjct: 134321 attgtagcagatatcatattgagatgccttaataaagatccatcagagaggcctaccatg 134262 Query: 1468 agggccgtcgtggaggccctaacaagcgttcaggacataaaggtcccctgccggtatcct 1527 |||||||| |||||| ||||| ||||||| |||||||||||||| || || || |||||| Sbjct: 134261 agggccgttgtggagtccctagcaagcgtccaggacataaaggttccatgtcgatatcct 134202 Query: 1528 cttcaagtaccgtccgccgcaccgaggaaagtgatgctaaagtctacgagcctcaatggc 1587 | |||| || || || || || || || |||||| |||| ||||| || ||||||||| Sbjct: 134201 ttgcaagagccatctgctgccccaagaaaggtgatgttaaaatctacaagtctcaatggc 134142 Query: 1588 attgttcctcagcatcccgtcatgaccttctcgccgtcgcctccttcgcgcaacca 1643 || ||| ||| ||||| ||| | |||||||| ||||| ||||||||||| ||||| Sbjct: 134141 atcattcatcaccatcctgtcgtaaccttctcaccgtcacctccttcgcgaaacca 134086 Score = 313 bits (158), Expect = 1e-81 Identities = 236/262 (90%) Strand = Plus / Minus Query: 787 cagagtttcaaagaatttaaggcacaagtaaatacgttggcatcacttcaacatcccaat 846 |||||||| ||||| ||||| ||||||| ||||| |||||||||||||| |||||||| Sbjct: 135339 cagagtttgaaagagtttaaaacacaagtgaataccttggcatcacttcagcatcccaac 135280 Query: 847 ttatgtaaactcatcggctatcacgcaagagaagaatctaatgaaaggatgttggtctat 906 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135279 ttatgtaaactaatcggctttcacgcaagagaagaatctaatgaaaggatgttggtctat 135220 Query: 907 gagcggctccatcatggcagtttagacaggttactctttggaagaccggaaggtcgtttc 966 ||||| |||||||||||||| ||||| | |||||||||||||| |||| ||||||||| Sbjct: 135219 gagcgactccatcatggcagcttagataaactactctttggaagatcggatggtcgtttc 135160 Query: 967 atggactggtctacacgtttgaaggttgcccttggtgctgctaaaggtctagctttccta 1026 ||||||||||| |||||||||||||||| ||||||||||||| ||| || ||||||||| Sbjct: 135159 atggactggtcagcacgtttgaaggttgctcttggtgctgctagaggcctggctttccta 135100 Query: 1027 catgatgaaggaccctttcagg 1048 ||||||||||| || ||||||| Sbjct: 135099 catgatgaagggccttttcagg 135078 Score = 264 bits (133), Expect = 1e-66 Identities = 397/485 (81%) Strand = Plus / Minus Query: 250 agacttccggagcccgaagctcatgtgccatctttgcagtcagcgcctcctagtttcagg 309 ||||| || ||||| ||||| ||||||||||| || || || || ||||||||||| ||| Sbjct: 136701 agactcccagagccagaagcgcatgtgccatcgttacaatctgctcctcctagttttagg 136642 Query: 310 gacagggcaaagatctgccaatcggccaataaagtctcttacagcagggcacgtgtgctg 369 ||| ||| || ||| |||||||| || |||| ||||||||||| || || |||||| Sbjct: 136641 aacaaggctaaaatccaccaatcggaaaagaaagcttcttacagcagagcgcgcgtgctg 136582 Query: 370 tctgctccctcgagcctgattctggttgatcaggatggccttccgtatgctgagttcgat 429 |||||||| || ||||| ||| |||||||||||||||| ||||| ||||| || |||||| Sbjct: 136581 tctgctccttccagcctaattgtggttgatcaggatggtcttccatatgccgaattcgat 136522 Query: 430 gatcaggatgactctaggggcaagggaggagctattaaggcacatcgtttttcaaatccg 489 ||||| |||||||| |||||||||||||| |||| |||| || ||||| || ||||| Sbjct: 136521 gatcaagatgactccaggggcaagggaggttctataaagggccaccgtttctctaatcca 136462 Query: 490 ctgccgcttcctcttccctcaccagaaggcagttctttgaggaactttggtagcttcaag 549 ||||| |||||||| || ||||||||||| | || |||||||||||||| |||||||| Sbjct: 136461 ctgccccttcctctcccatcaccagaaggaaaatcattgaggaactttggcagcttcaaa 136402 Query: 550 gctatcaatgcaagtgggccacttgaagtttcaggtcctctcccactgcctccaaagagg 609 || |||||||||||||| ||||| || | |||||| ||||| ||||| |||||||||| | Sbjct: 136401 gccatcaatgcaagtggaccactcgatgcttcaggccctctgccacttcctccaaagaag 136342 Query: 610 tccgaggggcttaagaacttctcgtacgatgagatttccactgcttgccagtggttttct 669 | || ||||||||||| ||||| || || || |||| | |||||||| ||||||||| Sbjct: 136341 tgtgatgggcttaagaatttctcctatgaggaactttcatcagcttgccaatggttttct 136282 Query: 670 ggcgatcatcgtgtctcagaaactctgacttcgacatcatacaaggcattgttcagggat 729 || || || |||| || |||| | |||| || |||||||||||||| | || |||||| Sbjct: 136281 ggtgaccagtgtgtttccgaaagtttgacatcaacatcatacaaggcgtcctttagggat 136222 Query: 730 gattt 734 ||||| Sbjct: 136221 gattt 136217 Score = 119 bits (60), Expect = 4e-23 Identities = 108/124 (87%) Strand = Plus / Minus Query: 1045 caggcaatgtatgatgacttctcaacgtcaaacatccaaatagagaaagatttcactgca 1104 ||||| ||||| ||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 134946 caggccatgtacaatgacttctcaacctcaaacatccaaattgacaaagatttcactgca 134887 Query: 1105 aagctgtcgggatatggttgtgttggcttcaattctgacgaggaaagatccaaggcatct 1164 ||||| || |||||||| |||||||| |||||| | || ||||||| ||| || |||||| Sbjct: 134886 aagctatcaggatatggatgtgttggattcaataccgaggaggaaatatcaaatgcatct 134827 Query: 1165 gtgg 1168 |||| Sbjct: 134826 gtgg 134823 Score = 60.0 bits (30), Expect = 3e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 157 atgatgggctgcttcactggcctgaggtccaagaagaagaag 198 |||||||| |||||||||| |||||| ||||||||||||||| Sbjct: 136794 atgatgggttgcttcactgtcctgagatccaagaagaagaag 136753 Score = 54.0 bits (27), Expect = 0.002 Identities = 72/87 (82%) Strand = Plus / Minus Query: 1714 ctggattaccccagggtaagctcggtcaagaagtcgccttccggtatcctgcggagacct 1773 |||||| |||| || |||||||| ||||||| ||||||||| ||| | |||||| || Sbjct: 134024 ctggatgaccctagagtaagctctatcaagaaatcgccttcccctattttacggagatct 133965 Query: 1774 ggcgtcgaaggtttttgattgtccata 1800 || || || |||||||||||||||||| Sbjct: 133964 ggtgttgagggtttttgattgtccata 133938
>gb|AC152936.21| Medicago truncatula clone mth2-47n14, complete sequence Length = 130801 Score = 67.9 bits (34), Expect = 1e-07 Identities = 73/86 (84%) Strand = Plus / Plus Query: 1045 caggcaatgtatgatgacttctcaacgtcaaacatccaaatagagaaagatttcactgca 1104 |||||||||||| |||| || ||||| | ||||| || || || |||||||||| |||| Sbjct: 61531 caggcaatgtataatgaattttcaacagctaacattcagattgacaaagatttcagtgca 61590 Query: 1105 aagctgtcgggatatggttgtgttgg 1130 ||||| || ||||||||||||||||| Sbjct: 61591 aagctttcaggatatggttgtgttgg 61616
>gb|BT012781.1| Lycopersicon esculentum clone 113765R, mRNA sequence Length = 1619 Score = 48.1 bits (24), Expect = 0.13 Identities = 33/36 (91%) Strand = Plus / Plus Query: 998 ttggtgctgctaaaggtctagctttcctacatgatg 1033 |||||||||||| ||| || |||||||||||||||| Sbjct: 756 ttggtgctgctagaggccttgctttcctacatgatg 791
>gb|AC157891.3| Medicago truncatula chromosome 7 BAC clone mte1-1i2, complete sequence Length = 154095 Score = 48.1 bits (24), Expect = 0.13 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1231 agctttggagttgtcttgctcgagctaataac 1262 |||| ||||||||| ||||||||||||||||| Sbjct: 34272 agctatggagttgttttgctcgagctaataac 34241
>gb|AC190141.2| Pan troglodytes BAC clone CH251-443L3 from chromosome 7, complete sequence Length = 168929 Score = 46.1 bits (23), Expect = 0.51 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1811 tttcttctctttgccttggatttattt 1837 |||||||| |||||||||||||||||| Sbjct: 103960 tttcttctgtttgccttggatttattt 103986
>gb|AE017308.1| Mycoplasma mobile 163K complete genome Length = 777079 Score = 46.1 bits (23), Expect = 0.51 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1812 ttcttctctttgccttggattta 1834 ||||||||||||||||||||||| Sbjct: 771040 ttcttctctttgccttggattta 771018
>gb|AC073205.6| Homo sapiens BAC clone RP11-323K15 from 7, complete sequence Length = 149914 Score = 46.1 bits (23), Expect = 0.51 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1811 tttcttctctttgccttggatttattt 1837 |||||||| |||||||||||||||||| Sbjct: 63325 tttcttctgtttgccttggatttattt 63351
>ref|NM_009442.2| Mus musculus transcription termination factor 1 (Ttf1), mRNA Length = 4170 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 793 ttcaaagaatttaaggcacaag 814 |||||||||||||||||||||| Sbjct: 1537 ttcaaagaatttaaggcacaag 1558
>ref|XM_001079632.1| PREDICTED: Rattus norvegicus similar to DIP13 beta (predicted) (RGD1563028_predicted), mRNA Length = 2986 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 903 ctatgagcggctccatcatggc 924 |||||||||||||||||||||| Sbjct: 710 ctatgagcggctccatcatggc 689
>ref|XM_343190.3| PREDICTED: Rattus norvegicus similar to DIP13 beta (predicted) (RGD1563028_predicted), mRNA Length = 2986 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 903 ctatgagcggctccatcatggc 924 |||||||||||||||||||||| Sbjct: 710 ctatgagcggctccatcatggc 689
>ref|XR_003859.1| PREDICTED: Mus musculus similar to transcription termination factor 1 (LOC383754), mRNA Length = 1767 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 793 ttcaaagaatttaaggcacaag 814 |||||||||||||||||||||| Sbjct: 693 ttcaaagaatttaaggcacaag 714
>ref|XR_005080.1| PREDICTED: Mus musculus similar to transcription termination factor 1 (LOC383754), mRNA Length = 1767 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 793 ttcaaagaatttaaggcacaag 814 |||||||||||||||||||||| Sbjct: 693 ttcaaagaatttaaggcacaag 714
>ref|NM_111710.3| Arabidopsis thaliana ATSIK; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase (ATSIK) mRNA, complete cds Length = 2085 Score = 44.1 bits (22), Expect = 2.0 Identities = 76/94 (80%) Strand = Plus / Plus Query: 1033 gaaggaccctttcaggcaatgtatgatgacttctcaacgtcaaacatccaaatagagaaa 1092 ||||| || |||||||||||||| |||| || || ||| |||| |||||| | || ||| Sbjct: 1101 gaaggcccttttcaggcaatgtacaatgaattttcgacggcaaatatccaagtcgataaa 1160 Query: 1093 gatttcactgcaaagctgtcgggatatggttgtg 1126 ||||||| || ||||| || ||||| ||||||| Sbjct: 1161 gatttcagcgccaagctatcaggatacggttgtg 1194
>gb|BC059011.1| Mus musculus transcription termination factor 1, mRNA (cDNA clone MGC:69635 IMAGE:6847867), complete cds Length = 3583 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 793 ttcaaagaatttaaggcacaag 814 |||||||||||||||||||||| Sbjct: 1504 ttcaaagaatttaaggcacaag 1525
>dbj|AK140081.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230207I01 product:transcription termination factor 1, full insert sequence Length = 5337 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 793 ttcaaagaatttaaggcacaag 814 |||||||||||||||||||||| Sbjct: 1535 ttcaaagaatttaaggcacaag 1556
>dbj|AK163606.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430217G02 product:transcription termination factor 1, full insert sequence Length = 1533 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 793 ttcaaagaatttaaggcacaag 814 |||||||||||||||||||||| Sbjct: 1463 ttcaaagaatttaaggcacaag 1484
>ref|XM_691671.1| PREDICTED: Danio rerio similar to AP1 gamma subunit binding protein 1 isoform 1 (LOC568346), mRNA Length = 4870 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 tgatgggctgcttcactggcct 179 |||||||||||||||||||||| Sbjct: 3858 tgatgggctgcttcactggcct 3879
>emb|CR954186.2| Medicago truncatula chromosome 5 clone mth2-117e18, COMPLETE SEQUENCE Length = 113233 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1237 ggagttgtcttgctcgagctaataac 1262 |||||||| ||||||||||||||||| Sbjct: 112572 ggagttgttttgctcgagctaataac 112547
>gb|AF462800.1|AF462800 Arabidopsis thaliana AT3g08760/F17O14_23 mRNA sequence Length = 1676 Score = 44.1 bits (22), Expect = 2.0 Identities = 76/94 (80%) Strand = Plus / Plus Query: 1033 gaaggaccctttcaggcaatgtatgatgacttctcaacgtcaaacatccaaatagagaaa 1092 ||||| || |||||||||||||| |||| || || ||| |||| |||||| | || ||| Sbjct: 716 gaaggcccttttcaggcaatgtacaatgaattttcgacggcaaatatccaagtcgataaa 775 Query: 1093 gatttcactgcaaagctgtcgggatatggttgtg 1126 ||||||| || ||||| || ||||| ||||||| Sbjct: 776 gatttcagcgccaagctatcaggatacggttgtg 809
>gb|AY026759.1| Arabidopsis thaliana protein kinase AtSIK mRNA, complete cds Length = 2044 Score = 44.1 bits (22), Expect = 2.0 Identities = 76/94 (80%) Strand = Plus / Plus Query: 1033 gaaggaccctttcaggcaatgtatgatgacttctcaacgtcaaacatccaaatagagaaa 1092 ||||| || |||||||||||||| |||| || || ||| |||| |||||| | || ||| Sbjct: 1065 gaaggcccttttcaggcaatgtacaatgaattttcgacggcaaatatccaagtcgataaa 1124 Query: 1093 gatttcactgcaaagctgtcgggatatggttgtg 1126 ||||||| || ||||| || ||||| ||||||| Sbjct: 1125 gatttcagcgccaagctatcaggatacggttgtg 1158
>emb|BX824574.1|CNS0A7FB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH57ZE02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2043 Score = 44.1 bits (22), Expect = 2.0 Identities = 76/94 (80%) Strand = Plus / Plus Query: 1033 gaaggaccctttcaggcaatgtatgatgacttctcaacgtcaaacatccaaatagagaaa 1092 ||||| || |||||||||||||| |||| || || ||| |||| |||||| | || ||| Sbjct: 1100 gaaggcccttttcaggcaatgtacaatgaattttcgacggcaaatatccaagtcgataaa 1159 Query: 1093 gatttcactgcaaagctgtcgggatatggttgtg 1126 ||||||| || ||||| || ||||| ||||||| Sbjct: 1160 gatttcagcgccaagctatcaggatacggttgtg 1193
>emb|BX822090.1|CNS0A79C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZD09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1952 Score = 44.1 bits (22), Expect = 2.0 Identities = 76/94 (80%) Strand = Plus / Plus Query: 1033 gaaggaccctttcaggcaatgtatgatgacttctcaacgtcaaacatccaaatagagaaa 1092 ||||| || |||||||||||||| |||| || || ||| |||| |||||| | || ||| Sbjct: 1029 gaaggcccttttcaggcaatgtacaatgaattttcgacggcaaatatccaagtcgataaa 1088 Query: 1093 gatttcactgcaaagctgtcgggatatggttgtg 1126 ||||||| || ||||| || ||||| ||||||| Sbjct: 1089 gatttcagcgccaagctatcaggatacggttgtg 1122
>emb|BX824984.1|CNS0A6V1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH87ZD03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1930 Score = 44.1 bits (22), Expect = 2.0 Identities = 76/94 (80%) Strand = Plus / Plus Query: 1033 gaaggaccctttcaggcaatgtatgatgacttctcaacgtcaaacatccaaatagagaaa 1092 ||||| || |||||||||||||| |||| || || ||| |||| |||||| | || ||| Sbjct: 1084 gaaggcccttttcaggcaatgtacaatgaattttcgacggcaaatatccaagtcgataaa 1143 Query: 1093 gatttcactgcaaagctgtcgggatatggttgtg 1126 ||||||| || ||||| || ||||| ||||||| Sbjct: 1144 gatttcagcgccaagctatcaggatacggttgtg 1177
>emb|BX004818.16| Zebrafish DNA sequence from clone DKEY-64O12, complete sequence Length = 215899 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 tgatgggctgcttcactggcct 179 |||||||||||||||||||||| Sbjct: 39066 tgatgggctgcttcactggcct 39087
>gb|AF237703.1|AF237703 Mus musculus RNA polymerase I transcription termination factor 1 mRNA, complete cds Length = 2580 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 793 ttcaaagaatttaaggcacaag 814 |||||||||||||||||||||| Sbjct: 1489 ttcaaagaatttaaggcacaag 1510
>emb|BX294183.17| Mouse DNA sequence from clone RP24-388B10 on chromosome X, complete sequence Length = 184943 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1416 agacataattctgaagtgcctt 1437 |||||||||||||||||||||| Sbjct: 38994 agacataattctgaagtgcctt 38973
>gb|AY109511.1| Zea mays CL1762_1 mRNA sequence Length = 2393 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1231 agctttggagttgtcttgctcgagctaataacaggacg 1268 ||||||||||||||| |||| |||||| | |||||||| Sbjct: 1929 agctttggagttgtcatgcttgagctactgacaggacg 1966
>emb|AL935314.9| Mouse DNA sequence from clone RP23-367B2 on chromosome 2, complete sequence Length = 36885 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 793 ttcaaagaatttaaggcacaag 814 |||||||||||||||||||||| Sbjct: 26482 ttcaaagaatttaaggcacaag 26461
>gb|AF023165.1|AF023165 Zea mays leucine-rich repeat transmembrane protein kinase 2 (ltk2) mRNA, complete cds Length = 2388 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1231 agctttggagttgtcttgctcgagctaataacaggacg 1268 ||||||||||||||| |||| |||||| | |||||||| Sbjct: 1924 agctttggagttgtcatgcttgagctactgacaggacg 1961
>emb|AL845267.2| Mouse DNA sequence from clone RP23-426D2 on chromosome 2, complete sequence Length = 216597 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 793 ttcaaagaatttaaggcacaag 814 |||||||||||||||||||||| Sbjct: 131647 ttcaaagaatttaaggcacaag 131668
>emb|X83974.1|MMRNATTFI M.musculus mRNA for TTF-I Length = 3517 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 793 ttcaaagaatttaaggcacaag 814 |||||||||||||||||||||| Sbjct: 1445 ttcaaagaatttaaggcacaag 1466
>dbj|AK241046.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065061J01, full insert sequence Length = 4456 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1618 tcgccgtcgcctccttcgcgc 1638 ||||||||||||||||||||| Sbjct: 3824 tcgccgtcgcctccttcgcgc 3804
>ref|NM_010844.1| Mus musculus mucin 5, subtypes A and C, tracheobronchial/gastric (Muc5ac), mRNA Length = 8505 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1168 gctgcaaacctctcagaggaa 1188 ||||||||||||||||||||| Sbjct: 8025 gctgcaaacctctcagaggaa 8045
>emb|CR855137.6| Zebrafish DNA sequence from clone CH211-37E10 in linkage group 24, complete sequence Length = 64856 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1830 atttatttgttgttttggtta 1850 ||||||||||||||||||||| Sbjct: 39404 atttatttgttgttttggtta 39424 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1830 atttatttgttgttttggtta 1850 ||||||||||||||||||||| Sbjct: 40207 atttatttgttgttttggtta 40227
>gb|AC175742.5| Mus musculus chromosome 7, clone wi1-437K4, complete sequence Length = 38181 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1168 gctgcaaacctctcagaggaa 1188 ||||||||||||||||||||| Sbjct: 15053 gctgcaaacctctcagaggaa 15073
>gb|AC160471.10| Mus musculus chromosome 7, clone RP23-432D9, complete sequence Length = 222272 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 789 gagtttcaaagaatttaaggcacaa 813 |||||||||||||||||| |||||| Sbjct: 165792 gagtttcaaagaatttaaagcacaa 165768
>gb|AC148242.14| Medicago truncatula clone mth2-18f6, complete sequence Length = 125077 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 caagaagaagaagagccctct 206 ||||||||||||||||||||| Sbjct: 56331 caagaagaagaagagccctct 56311
>gb|AC147121.2| Mus musculus BAC clone RP24-160L14 from chromosome 7, complete sequence Length = 185191 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1281 tgtacgttccaccaaagaaga 1301 ||||||||||||||||||||| Sbjct: 31274 tgtacgttccaccaaagaaga 31294
>gb|AC126435.3| Mus musculus BAC clone RP24-158D10 from chromosome 7, complete sequence Length = 128390 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1281 tgtacgttccaccaaagaaga 1301 ||||||||||||||||||||| Sbjct: 108749 tgtacgttccaccaaagaaga 108769
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 gcctgattctggttgatcagg 403 ||||||||||||||||||||| Sbjct: 1405729 gcctgattctggttgatcagg 1405709
>ref|XM_384159.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03983.1) partial mRNA Length = 690 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1411 gtggcagacataattctgaag 1431 ||||||||||||||||||||| Sbjct: 484 gtggcagacataattctgaag 504
>dbj|AK008656.1| Mus musculus adult male stomach cDNA, RIKEN full-length enriched library, clone:2210005L13 product:MUC5AC PROTEIN (FRAGMENT), full insert sequence Length = 635 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1168 gctgcaaacctctcagaggaa 1188 ||||||||||||||||||||| Sbjct: 67 gctgcaaacctctcagaggaa 87
>gb|AC100767.2| Homo sapiens chromosome 11, clone RP11-787P24, complete sequence Length = 170435 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1830 atttatttgttgttttggtta 1850 ||||||||||||||||||||| Sbjct: 17950 atttatttgttgttttggtta 17930
>gb|AC093874.3| Homo sapiens BAC clone RP11-624O16 from 4, complete sequence Length = 158245 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1835 tttgttgttttggttagccta 1855 ||||||||||||||||||||| Sbjct: 28307 tttgttgttttggttagccta 28287
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 849 atgtaaactcatcggctatcacgca 873 |||||||| |||||||||||||||| Sbjct: 17489684 atgtaaacacatcggctatcacgca 17489660 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1618 tcgccgtcgcctccttcgcgc 1638 ||||||||||||||||||||| Sbjct: 20214108 tcgccgtcgcctccttcgcgc 20214088
>gb|AC106821.2| Homo sapiens chromosome 5 clone RP11-730N24, complete sequence Length = 151355 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1082 aaatagagaaagatttcactg 1102 ||||||||||||||||||||| Sbjct: 2584 aaatagagaaagatttcactg 2564
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1183 gaggaaaccttggagaaaggc 1203 ||||||||||||||||||||| Sbjct: 286547 gaggaaaccttggagaaaggc 286527
>gb|AC026428.5| Homo sapiens chromosome 5 clone CTD-2203I6, complete sequence Length = 85149 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1082 aaatagagaaagatttcactg 1102 ||||||||||||||||||||| Sbjct: 44967 aaatagagaaagatttcactg 44987
>gb|AC119193.9| Mus musculus chromosome 7, clone RP24-178L6, complete sequence Length = 162310 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 789 gagtttcaaagaatttaaggcacaa 813 |||||||||||||||||| |||||| Sbjct: 106720 gagtttcaaagaatttaaagcacaa 106744
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 865 tatcacgcaagagaagaatct 885 ||||||||||||||||||||| Sbjct: 3142205 tatcacgcaagagaagaatct 3142225
>emb|BX323869.7| Zebrafish DNA sequence from clone CH211-206K18 in linkage group 4 Contains the gene for a novel protein similar to vertebrate minichromosome maintenance deficient 10 (S.cerevisiae) (MCM10), the gene for a novel protein (zgc:86930), the gene for a novel protein (zgc:73119), the 5' end of the gene for a novel protein similar to vertebrate PCTAIRE protein kinase 2 (PCTK2), the gene for a novel protein similar to vertebrate phytanoyl-CoA hydroxylase (Refsum disease) (PHYH) and a CpG island, complete sequence Length = 160964 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1830 atttatttgttgttttggtta 1850 ||||||||||||||||||||| Sbjct: 14630 atttatttgttgttttggtta 14650
>emb|BX324135.14| Zebrafish DNA sequence from clone DKEY-16J16, complete sequence Length = 229936 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1826 ttggatttatttgttgttttg 1846 ||||||||||||||||||||| Sbjct: 210080 ttggatttatttgttgttttg 210060
>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0077M12 Length = 145337 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1618 tcgccgtcgcctccttcgcgc 1638 ||||||||||||||||||||| Sbjct: 79894 tcgccgtcgcctccttcgcgc 79874
>dbj|AP004465.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690C12 Length = 139693 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 849 atgtaaactcatcggctatcacgca 873 |||||||| |||||||||||||||| Sbjct: 100529 atgtaaacacatcggctatcacgca 100505
>emb|AJ511871.1|MMU511871 Mus musculus partial Muc5ac gene for secreted gel-forming mucin, exons 31-49 Length = 9714 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1168 gctgcaaacctctcagaggaa 1188 ||||||||||||||||||||| Sbjct: 9386 gctgcaaacctctcagaggaa 9406
>gb|AC154104.2| Mus musculus BAC clone RP24-555C7 from 7, complete sequence Length = 191855 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 496 cttcctcttccctcaccagaa 516 ||||||||||||||||||||| Sbjct: 73137 cttcctcttccctcaccagaa 73117
>gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, complete sequence Length = 240821 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1829 gatttatttgttgttttggtt 1849 ||||||||||||||||||||| Sbjct: 165222 gatttatttgttgttttggtt 165242
>gb|AC110192.14| Mus musculus chromosome 7, clone RP23-227K15, complete sequence Length = 181287 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 aggtccaagaagaagaagagc 201 ||||||||||||||||||||| Sbjct: 112905 aggtccaagaagaagaagagc 112885
>emb|AJ010792.1|MMU010792 Mus musculus Muc5AC-like gene, partial Length = 2937 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1168 gctgcaaacctctcagaggaa 1188 ||||||||||||||||||||| Sbjct: 2454 gctgcaaacctctcagaggaa 2474
>emb|AL732530.6| Mouse DNA sequence from clone RP23-102I12 on chromosome 4, complete sequence Length = 211998 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1081 caaatagagaaagatttcactgcaa 1105 ||||||||||||||| ||||||||| Sbjct: 41149 caaatagagaaagatatcactgcaa 41125
>gb|AC167357.6| Mus musculus chromosome 7, clone RP23-388K14, complete sequence Length = 185128 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 789 gagtttcaaagaatttaaggcacaa 813 |||||||||||||||||| |||||| Sbjct: 1594 gagtttcaaagaatttaaagcacaa 1618 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 344,800,659 Number of extensions: 18490166 Number of successful extensions: 94183 Number of sequences better than 10.0: 66 Number of HSP's gapped: 94161 Number of HSP's successfully gapped: 88 Length of query: 2068 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2045 Effective length of database: 18,503,978,556 Effective search space: 37840636147020 Effective search space used: 37840636147020 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
