ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf42h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001061465.1| Oryza sativa (japonica cultivar-group) Os05g... 404 e-109
2dbj|AK061081.1| Oryza sativa (japonica cultivar-group) cDNA clon... 404 e-109
3gb|BT017845.1| Zea mays clone EL01N0510D05.c mRNA sequence 337 7e-89
4gb|AC136226.2| Oryza sativa (japonica cultivar-group) chromosome... 289 2e-74
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 289 2e-74
6gb|AY110056.1| Zea mays CL10675_1 mRNA sequence 84 2e-12
7emb|AJ011801.1|STU011801 Solanum tuberosum rx gene 48 0.096
8gb|DQ068125.1| Brassica napus isolate mutant Cr3529 clone Bncr17... 46 0.38
9ref|NM_116338.2| Arabidopsis thaliana unknown protein (AT4G01080... 46 0.38
10gb|BT015944.1| Arabidopsis thaliana At4g01080 mRNA, complete cds 46 0.38
11gb|AF265664.1| Solanum tuberosum resistance gene cluster, comple... 46 0.38
12emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome 4, c... 46 0.38
13gb|BT003985.1| Arabidopsis thaliana clone RAFL15-13-H20 (R20815)... 46 0.38
14emb|BX828742.1|CNS0A3K4 Arabidopsis thaliana Full-length cDNA Co... 46 0.38
15gb|AY952464.1| Brassica napus mutant Cr3529 unknown protein Cr17... 46 0.38
16gb|AF007269.1|IG002N01 Arabidopsis thaliana BAC IG002N01 46 0.38
17gb|BT017458.1| Zea mays clone EL01N0407C06.c mRNA sequence 44 1.5
18gb|AC120148.13| Mus musculus chromosome 9, clone RP24-225E14, co... 44 1.5
19gb|AC124359.3| Mus musculus BAC clone RP24-495G2 from chromosome... 44 1.5
20ref|NM_001033983.1| Mus musculus RIKEN cDNA 7420426K07 gene (742... 44 1.5
21gb|AF266747.1| Solanum tuberosum RGC1 (RGC1) gene, partial cds 44 1.5
22emb|AJ249448.1|SAC249448 Solanum acaule Rx2.ac15 gene for NBS-LR... 44 1.5
23emb|AJ249449.1|STU249449 Solanum tuberosum GPA2 gene for NBS-LRR... 44 1.5
24gb|AF195939.1|AF195939 Solanum tuberosum disease resistance prot... 44 1.5
25gb|AC140454.4| Mus musculus BAC clone RP24-163I14 from 1, comple... 44 1.5
26gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome 42 5.9
27ref|NM_001054539.1| Oryza sativa (japonica cultivar-group) Os02g... 42 5.9
28gb|AC183775.2| Pan troglodytes chromosome X clone CH251-286C11 m... 42 5.9
29gb|CP000431.1| Rhodococcus sp. RHA1, complete genome 42 5.9
30gb|AC175194.2| Sporobolomyces roseus clone JGIBAIF-13P11, comple... 42 5.9
31gb|AC164119.4| Mus musculus BAC clone RP24-288I15 from chromosom... 42 5.9
32gb|AC171263.1| Pan troglodytes chromosome X clone PTB-018K13 map... 42 5.9
33gb|AC150208.1| Pan troglodytes chromosome X clone PTB-043C05 map... 42 5.9
34gb|AC015743.9| Homo sapiens chromosome 8, clone RP11-1G11, compl... 42 5.9
35dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 5.9
36emb|AL627402.10| Human DNA sequence from clone RP11-204C16 on ch... 42 5.9
37gb|AF390900.1|AF390897S4 Mus musculus germ cell nuclear factor (... 42 5.9
38emb|BX957316.7| Zebrafish DNA sequence from clone CH211-120B19 i... 42 5.9
39dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic D... 42 5.9
40emb|AL844842.29| Mouse DNA sequence from clone RP23-354G20 on ch... 42 5.9
41emb|CT571243.9| Mouse DNA sequence from clone RP23-122I21 on chr... 42 5.9
42gb|AC015564.13| Homo sapiens chromosome 8, clone RP11-351D9, com... 42 5.9
43gb|AC171204.1| Mus musculus BAC clone RP23-312J21 from chromosom... 42 5.9 
>ref|NM_001061465.1| Oryza sativa (japonica cultivar-group) Os05g0214900 (Os05g0214900)
           mRNA, complete cds
          Length = 1014
 Score =  404 bits (204), Expect = e-109
 Identities = 420/492 (85%)
 Strand = Plus / Plus

                                                                       
Query: 210 atggagaatggctaccaaatccctctggcccagcgtatacaaattcaagttgtcgattta 269
           |||| |||||| |||||||||||||||||||||| ||||| ||   || |||||||||||
Sbjct: 314 atggtgaatggataccaaatccctctggcccagcctataccaacaaaacttgtcgattta 373

                                                                       
Query: 270 ttgatgatcaccaaaattgcatgatgaatggtagatcagacactggatatcttcactgga 329
           |||||| |||||| || || ||| ||||||||||| | ||||    |||| | |||||||
Sbjct: 374 ttgatggtcaccagaactgtatgttgaatggtagacctgacatgtcatatttacactgga 433

                                                                       
Query: 330 ggtggaaaccttatgaatgtgatttgcaaccgtttgatgaaattagatttctaggtgcta 389
           |||||||||| ||||| |||||  ||| ||  ||||||||| | ||||||||| ||||||
Sbjct: 434 ggtggaaaccatatgagtgtgaactgccacaatttgatgaagtgagatttctaagtgcta 493

                                                                       
Query: 390 tgaggaacaaagcatggggccttattggtgactccattcttcgtaaccaagttcagtcat 449
           ||||||||||| | ||||| || ||||||||||||||||||||||| |||||||||||| 
Sbjct: 494 tgaggaacaaatcctggggtctgattggtgactccattcttcgtaatcaagttcagtcac 553

                                                                       
Query: 450 tgatatgccttctgtctaaggctgacgaacctgtcgaggtctaccacgataaagaattca 509
           || | |||||| ||||||||||||| |||||| | || || ||||| || || |||| ||
Sbjct: 554 tgctttgccttttgtctaaggctgaagaacctattgaagtgtaccatgacaaggaataca 613

                                                                       
Query: 510 aaaataggagatggcacttccaatcatacaacttcaccgtgtccctcgtttgggctccct 569
            ||| |||||||||||||||||||||||||||||||||||||| ||||| |||  |||||
Sbjct: 614 gaaacaggagatggcacttccaatcatacaacttcaccgtgtcactcgtctggagtccct 673

                                                                       
Query: 570 tcctcgtcaaatcagaggtttttgaaaatgagaatggcgagtccacgtctgagatccagc 629
           |||||  |||||| ||||| |||||||||||||||||  | ||||| ||||| |||||||
Sbjct: 674 tcctcaccaaatctgaggtatttgaaaatgagaatgggcaatccacctctgaaatccagc 733

                                                                       
Query: 630 ttcaccttgacatacttgaaccaacctggataagtcagtacgagaggtttgactatgttg 689
           ||||||||||||||||||| |||| ||||| ||||||||| ||||  || ||||||||||
Sbjct: 734 ttcaccttgacatacttgacccaatctggacaagtcagtatgagaccttcgactatgttg 793

                       
Query: 690 tgattgccggtg 701
           | ||||||||||
Sbjct: 794 ttattgccggtg 805
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>dbj|AK061081.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-F03, full
           insert sequence
          Length = 1014

 Score =  404 bits (204), Expect = e-109
 Identities = 420/492 (85%)
 Strand = Plus / Plus

                                                                       
Query: 210 atggagaatggctaccaaatccctctggcccagcgtatacaaattcaagttgtcgattta 269
           |||| |||||| |||||||||||||||||||||| ||||| ||   || |||||||||||
Sbjct: 314 atggtgaatggataccaaatccctctggcccagcctataccaacaaaacttgtcgattta 373

                                                                       
Query: 270 ttgatgatcaccaaaattgcatgatgaatggtagatcagacactggatatcttcactgga 329
           |||||| |||||| || || ||| ||||||||||| | ||||    |||| | |||||||
Sbjct: 374 ttgatggtcaccagaactgtatgttgaatggtagacctgacatgtcatatttacactgga 433

                                                                       
Query: 330 ggtggaaaccttatgaatgtgatttgcaaccgtttgatgaaattagatttctaggtgcta 389
           |||||||||| ||||| |||||  ||| ||  ||||||||| | ||||||||| ||||||
Sbjct: 434 ggtggaaaccatatgagtgtgaactgccacaatttgatgaagtgagatttctaagtgcta 493

                                                                       
Query: 390 tgaggaacaaagcatggggccttattggtgactccattcttcgtaaccaagttcagtcat 449
           ||||||||||| | ||||| || ||||||||||||||||||||||| |||||||||||| 
Sbjct: 494 tgaggaacaaatcctggggtctgattggtgactccattcttcgtaatcaagttcagtcac 553

                                                                       
Query: 450 tgatatgccttctgtctaaggctgacgaacctgtcgaggtctaccacgataaagaattca 509
           || | |||||| ||||||||||||| |||||| | || || ||||| || || |||| ||
Sbjct: 554 tgctttgccttttgtctaaggctgaagaacctattgaagtgtaccatgacaaggaataca 613

                                                                       
Query: 510 aaaataggagatggcacttccaatcatacaacttcaccgtgtccctcgtttgggctccct 569
            ||| |||||||||||||||||||||||||||||||||||||| ||||| |||  |||||
Sbjct: 614 gaaacaggagatggcacttccaatcatacaacttcaccgtgtcactcgtctggagtccct 673

                                                                       
Query: 570 tcctcgtcaaatcagaggtttttgaaaatgagaatggcgagtccacgtctgagatccagc 629
           |||||  |||||| ||||| |||||||||||||||||  | ||||| ||||| |||||||
Sbjct: 674 tcctcaccaaatctgaggtatttgaaaatgagaatgggcaatccacctctgaaatccagc 733

                                                                       
Query: 630 ttcaccttgacatacttgaaccaacctggataagtcagtacgagaggtttgactatgttg 689
           ||||||||||||||||||| |||| ||||| ||||||||| ||||  || ||||||||||
Sbjct: 734 ttcaccttgacatacttgacccaatctggacaagtcagtatgagaccttcgactatgttg 793

                       
Query: 690 tgattgccggtg 701
           | ||||||||||
Sbjct: 794 ttattgccggtg 805
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>gb|BT017845.1| Zea mays clone EL01N0510D05.c mRNA sequence
          Length = 1265

 Score =  337 bits (170), Expect = 7e-89
 Identities = 455/550 (82%)
 Strand = Plus / Plus

                                                                       
Query: 260 tgtcgatttattgatgatcaccaaaattgcatgatgaatggtagatcagacactggatat 319
           ||||||||||| || |||||||| || | | | |||||||||||| | || |  | ||||
Sbjct: 17  tgtcgatttatcgacgatcaccagaactcccttatgaatggtagacctgataaggaatat 76

                                                                       
Query: 320 cttcactggaggtggaaaccttatgaatgtgatttgcaaccgtttgatgaaattagattt 379
           || || |||| |||||||||||||| ||||||| | | ||| ||||||| | | ||||||
Sbjct: 77  ctacattggaagtggaaaccttatggatgtgatcttccaccctttgatgcagtaagattt 136

                                                                       
Query: 380 ctaggtgctatgaggaacaaagcatggggccttattggtgactccattcttcgtaaccaa 439
           |||| | || |||| |||||||  ||||| || |||||||||||||| ||||||||||||
Sbjct: 137 ctagattctgtgagaaacaaaggttggggactaattggtgactccatccttcgtaaccaa 196

                                                                       
Query: 440 gttcagtcattgatatgccttctgtctaaggctgacgaacctgtcgaggtctaccacgat 499
           |||||||||||| | |||||||||||||||||||| |||||||| ||||| ||||| |||
Sbjct: 197 gttcagtcattgctttgccttctgtctaaggctgaagaacctgttgaggtttaccatgat 256

                                                                       
Query: 500 aaagaattcaaaaataggagatggcacttccaatcatacaacttcaccgtgtccctcgtt 559
           || ||||||||||| |||||||||||||||||||| ||||||||||| |||||| |||| 
Sbjct: 257 aacgaattcaaaaacaggagatggcacttccaatcctacaacttcacagtgtccatcgtc 316

                                                                       
Query: 560 tgggctcccttcctcgtcaaatcagaggtttttgaaaatgagaatggcgagtccacgtct 619
           |||||||| |||||| ||||||| |   ||||||| |||||| |||||| ||| || |||
Sbjct: 317 tgggctcctttcctcatcaaatctggtatttttgagaatgaggatggcgtgtctacctct 376

                                                                       
Query: 620 gagatccagcttcaccttgacatacttgaaccaacctggataagtcagtacgagaggttt 679
           || || ||||| |||||||| ||||| ||  | | ||||| ||||||||| ||||| |||
Sbjct: 377 gaaatacagctccaccttgatatactcgatgctaactggacaagtcagtatgagagcttt 436

                                                                       
Query: 680 gactatgttgtgattgccggtggacaatggtttctcaagactgcggtttactgggagaat 739
           |||||| || | ||| | || |||||||||||||| | ||| ||||| ||||||||||| 
Sbjct: 437 gactatattattatttctggcggacaatggtttctgaggacagcggtctactgggagaac 496

                                                                       
Query: 740 ggtaaggtgttaggctgtcatcattgccaggacaagaacctaactgaagttgggtttgag 799
           |||   ||| | ||  ||||| |||  ||| |||||||| |  ||||| |||| ||||||
Sbjct: 497 ggtgcagtggttggtggtcataattctcagaacaagaacgtcgctgaacttggttttgag 556

                     
Query: 800 cacctgtatc 809
           ||||||||||
Sbjct: 557 cacctgtatc 566



 Score = 52.0 bits (26), Expect = 0.006
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 857 aagccagttgttctcttcagaacttgggcgcctgaccactttgagaatggcgagtggttc 916
           ||||||||  || ||||||| || ||| | ||||| ||||| ||| |||| |||||||||
Sbjct: 614 aagccagtaattttcttcaggacctggtcacctgatcacttcgaggatggagagtggttc 673

                                                             
Query: 917 agcggtggaacctgtaatagggtattgccttacaagaagggagagtacag 966
           ||||||||  | |||   |||  |||||| ||||| ||||||||||||||
Sbjct: 674 agcggtgggtcttgtcgcaggaaattgccctacaacaagggagagtacag 723
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>gb|AC136226.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0067H15,
              complete sequence
          Length = 184316

 Score =  289 bits (146), Expect = 2e-74
 Identities = 299/350 (85%)
 Strand = Plus / Plus

                                                                          
Query: 468    aggctgacgaacctgtcgaggtctaccacgataaagaattcaaaaataggagatggcact 527
              ||||||| |||||| | || || ||||| || || |||| || ||| |||||||||||||
Sbjct: 166372 aggctgaagaacctattgaagtgtaccatgacaaggaatacagaaacaggagatggcact 166431

                                                                          
Query: 528    tccaatcatacaacttcaccgtgtccctcgtttgggctcccttcctcgtcaaatcagagg 587
              ||||||||||||||||||||||||| ||||| |||  ||||||||||  |||||| ||||
Sbjct: 166432 tccaatcatacaacttcaccgtgtcactcgtctggagtcccttcctcaccaaatctgagg 166491

                                                                          
Query: 588    tttttgaaaatgagaatggcgagtccacgtctgagatccagcttcaccttgacatacttg 647
              | |||||||||||||||||  | ||||| ||||| |||||||||||||||||||||||||
Sbjct: 166492 tatttgaaaatgagaatgggcaatccacctctgaaatccagcttcaccttgacatacttg 166551

                                                                          
Query: 648    aaccaacctggataagtcagtacgagaggtttgactatgttgtgattgccggtggacaat 707
              | |||| ||||| ||||||||| ||||  || ||||||||||| ||||||||||||||||
Sbjct: 166552 acccaatctggacaagtcagtatgagaccttcgactatgttgttattgccggtggacaat 166611

                                                                          
Query: 708    ggtttctcaagactgcggtttactgggagaatggtaaggtgttaggctgtcatcattgcc 767
              |||||||||||   ||||| ||||||||||||| || |||| ||||||| ||| | || |
Sbjct: 166612 ggtttctcaaggtcgcggtctactgggagaatgatagggtgataggctgccattactgtc 166671

                                                                
Query: 768    aggacaagaacctaactgaagttgggtttgagcacctgtatcgcaggact 817
              ||||||||||  ||  |||| |||| ||||| ||||| ||||||||||||
Sbjct: 166672 aggacaagaagttacgtgaacttggatttgaacacctctatcgcaggact 166721



 Score =  200 bits (101), Expect = 1e-47
 Identities = 221/261 (84%)
 Strand = Plus / Plus

                                                                          
Query: 210    atggagaatggctaccaaatccctctggcccagcgtatacaaattcaagttgtcgattta 269
              |||| |||||| |||||||||||||||||||||| ||||| ||   || |||||||||||
Sbjct: 165852 atggtgaatggataccaaatccctctggcccagcctataccaacaaaacttgtcgattta 165911

                                                                          
Query: 270    ttgatgatcaccaaaattgcatgatgaatggtagatcagacactggatatcttcactgga 329
              |||||| |||||| || || ||| ||||||||||| | ||||    |||| | |||||||
Sbjct: 165912 ttgatggtcaccagaactgtatgttgaatggtagacctgacatgtcatatttacactgga 165971

                                                                          
Query: 330    ggtggaaaccttatgaatgtgatttgcaaccgtttgatgaaattagatttctaggtgcta 389
              |||||||||| ||||| |||||  ||| ||  ||||||||| | ||||||||| ||||||
Sbjct: 165972 ggtggaaaccatatgagtgtgaactgccacaatttgatgaagtgagatttctaagtgcta 166031

                                                                          
Query: 390    tgaggaacaaagcatggggccttattggtgactccattcttcgtaaccaagttcagtcat 449
              ||||||||||| | ||||| || ||||||||||||||||||||||| |||||||||||| 
Sbjct: 166032 tgaggaacaaatcctggggtctgattggtgactccattcttcgtaatcaagttcagtcac 166091

                                   
Query: 450    tgatatgccttctgtctaagg 470
              || | |||||| |||||||||
Sbjct: 166092 tgctttgccttttgtctaagg 166112



 Score = 91.7 bits (46), Expect = 7e-15
 Identities = 103/122 (84%)
 Strand = Plus / Plus

                                                                          
Query: 860    ccagttgttctcttcagaacttgggcgcctgaccactttgagaatggcgagtggttcagc 919
              |||| |||||||||||| |||||||| || || ||||| ||||| |  || ||||||| |
Sbjct: 166764 ccagctgttctcttcaggacttgggcacccgatcacttcgagaacgcggaatggttcaac 166823

                                                                          
Query: 920    ggtggaacctgtaatagggtattgccttacaagaagggagagtacagcgggaaatacatg 979
              || ||||| ||||   |||| ||||||||||||||||||||||||||||| ||| |||||
Sbjct: 166824 gggggaacttgtagccgggttttgccttacaagaagggagagtacagcggaaaagacatg 166883

                
Query: 980    ga 981
              ||
Sbjct: 166884 ga 166885



 Score = 91.7 bits (46), Expect = 7e-15
 Identities = 61/66 (92%)
 Strand = Plus / Plus

                                                                          
Query: 1061   ctgaagctcttggacacttacagcatttcgtccatgagacctgacggccatgctggtcct 1120
              |||||||||||||| || |||||||||||||||||||||||||| ||||||| ||| |||
Sbjct: 166965 ctgaagctcttggatacctacagcatttcgtccatgagacctgatggccatgttgggcct 167024

                    
Query: 1121   tacagg 1126
              ||||||
Sbjct: 167025 tacagg 167030



 Score = 75.8 bits (38), Expect = 4e-10
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                          
Query: 1157   gttcagaatgattgcctgcattggtgcgtgccagggcccatcgacgcctggaacgatctg 1216
              |||||||||||||||||||||||||| || ||||| || |||||||| ||||| ||||| 
Sbjct: 167067 gttcagaatgattgcctgcattggtgtgtaccaggccctatcgacgcttggaatgatctc 167126

                            
Query: 1217   attatgaagttggt 1230
               |||||||| ||||
Sbjct: 167127 gttatgaagatggt 167140
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  289 bits (146), Expect = 2e-74
 Identities = 299/350 (85%)
 Strand = Plus / Plus

                                                                           
Query: 468     aggctgacgaacctgtcgaggtctaccacgataaagaattcaaaaataggagatggcact 527
               ||||||| |||||| | || || ||||| || || |||| || ||| |||||||||||||
Sbjct: 7041449 aggctgaagaacctattgaagtgtaccatgacaaggaatacagaaacaggagatggcact 7041508

                                                                           
Query: 528     tccaatcatacaacttcaccgtgtccctcgtttgggctcccttcctcgtcaaatcagagg 587
               ||||||||||||||||||||||||| ||||| |||  ||||||||||  |||||| ||||
Sbjct: 7041509 tccaatcatacaacttcaccgtgtcactcgtctggagtcccttcctcaccaaatctgagg 7041568

                                                                           
Query: 588     tttttgaaaatgagaatggcgagtccacgtctgagatccagcttcaccttgacatacttg 647
               | |||||||||||||||||  | ||||| ||||| |||||||||||||||||||||||||
Sbjct: 7041569 tatttgaaaatgagaatgggcaatccacctctgaaatccagcttcaccttgacatacttg 7041628

                                                                           
Query: 648     aaccaacctggataagtcagtacgagaggtttgactatgttgtgattgccggtggacaat 707
               | |||| ||||| ||||||||| ||||  || ||||||||||| ||||||||||||||||
Sbjct: 7041629 acccaatctggacaagtcagtatgagaccttcgactatgttgttattgccggtggacaat 7041688

                                                                           
Query: 708     ggtttctcaagactgcggtttactgggagaatggtaaggtgttaggctgtcatcattgcc 767
               |||||||||||   ||||| ||||||||||||| || |||| ||||||| ||| | || |
Sbjct: 7041689 ggtttctcaaggtcgcggtctactgggagaatgatagggtgataggctgccattactgtc 7041748

                                                                 
Query: 768     aggacaagaacctaactgaagttgggtttgagcacctgtatcgcaggact 817
               ||||||||||  ||  |||| |||| ||||| ||||| ||||||||||||
Sbjct: 7041749 aggacaagaagttacgtgaacttggatttgaacacctctatcgcaggact 7041798



 Score =  200 bits (101), Expect = 1e-47
 Identities = 221/261 (84%)
 Strand = Plus / Plus

                                                                           
Query: 210     atggagaatggctaccaaatccctctggcccagcgtatacaaattcaagttgtcgattta 269
               |||| |||||| |||||||||||||||||||||| ||||| ||   || |||||||||||
Sbjct: 7040929 atggtgaatggataccaaatccctctggcccagcctataccaacaaaacttgtcgattta 7040988

                                                                           
Query: 270     ttgatgatcaccaaaattgcatgatgaatggtagatcagacactggatatcttcactgga 329
               |||||| |||||| || || ||| ||||||||||| | ||||    |||| | |||||||
Sbjct: 7040989 ttgatggtcaccagaactgtatgttgaatggtagacctgacatgtcatatttacactgga 7041048

                                                                           
Query: 330     ggtggaaaccttatgaatgtgatttgcaaccgtttgatgaaattagatttctaggtgcta 389
               |||||||||| ||||| |||||  ||| ||  ||||||||| | ||||||||| ||||||
Sbjct: 7041049 ggtggaaaccatatgagtgtgaactgccacaatttgatgaagtgagatttctaagtgcta 7041108

                                                                           
Query: 390     tgaggaacaaagcatggggccttattggtgactccattcttcgtaaccaagttcagtcat 449
               ||||||||||| | ||||| || ||||||||||||||||||||||| |||||||||||| 
Sbjct: 7041109 tgaggaacaaatcctggggtctgattggtgactccattcttcgtaatcaagttcagtcac 7041168

                                    
Query: 450     tgatatgccttctgtctaagg 470
               || | |||||| |||||||||
Sbjct: 7041169 tgctttgccttttgtctaagg 7041189



 Score = 91.7 bits (46), Expect = 7e-15
 Identities = 103/122 (84%)
 Strand = Plus / Plus

                                                                           
Query: 860     ccagttgttctcttcagaacttgggcgcctgaccactttgagaatggcgagtggttcagc 919
               |||| |||||||||||| |||||||| || || ||||| ||||| |  || ||||||| |
Sbjct: 7041841 ccagctgttctcttcaggacttgggcacccgatcacttcgagaacgcggaatggttcaac 7041900

                                                                           
Query: 920     ggtggaacctgtaatagggtattgccttacaagaagggagagtacagcgggaaatacatg 979
               || ||||| ||||   |||| ||||||||||||||||||||||||||||| ||| |||||
Sbjct: 7041901 gggggaacttgtagccgggttttgccttacaagaagggagagtacagcggaaaagacatg 7041960

                 
Query: 980     ga 981
               ||
Sbjct: 7041961 ga 7041962



 Score = 91.7 bits (46), Expect = 7e-15
 Identities = 61/66 (92%)
 Strand = Plus / Plus

                                                                           
Query: 1061    ctgaagctcttggacacttacagcatttcgtccatgagacctgacggccatgctggtcct 1120
               |||||||||||||| || |||||||||||||||||||||||||| ||||||| ||| |||
Sbjct: 7042042 ctgaagctcttggatacctacagcatttcgtccatgagacctgatggccatgttgggcct 7042101

                     
Query: 1121    tacagg 1126
               ||||||
Sbjct: 7042102 tacagg 7042107



 Score = 75.8 bits (38), Expect = 4e-10
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                           
Query: 1157    gttcagaatgattgcctgcattggtgcgtgccagggcccatcgacgcctggaacgatctg 1216
               |||||||||||||||||||||||||| || ||||| || |||||||| ||||| ||||| 
Sbjct: 7042144 gttcagaatgattgcctgcattggtgtgtaccaggccctatcgacgcttggaatgatctc 7042203

                             
Query: 1217    attatgaagttggt 1230
                |||||||| ||||
Sbjct: 7042204 gttatgaagatggt 7042217
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>gb|AY110056.1| Zea mays CL10675_1 mRNA sequence
          Length = 905

 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 171/214 (79%)
 Strand = Plus / Minus

                                                                       
Query: 596 aatgagaatggcgagtccacgtctgagatccagcttcaccttgacatacttgaaccaacc 655
           |||||| |||||| ||| || ||||| || ||||| |||||||| ||||| ||  | | |
Sbjct: 861 aatgaggatggcgtgtctacctctgaaatacagctccaccttgatatactcgatgctaac 802

                                                                       
Query: 656 tggataagtcagtacgagaggtttgactatgttgtgattgccggtggacaatggtttctc 715
           |||| ||||||||| ||||| ||||||||| || | ||| | || |||||||||||||| 
Sbjct: 801 tggacaagtcagtatgagagctttgactatattattatttctggcggacaatggtttctg 742

                                                                       
Query: 716 aagactgcggtttactgggagaatggtaaggtgttaggctgtcatcattgccaggacaag 775
           | ||| ||||| ||||||||||| |||   ||| | ||  ||||| |||  ||| |||||
Sbjct: 741 aggacagcggtctactgggagaacggtgcagtggttggtggtcataattctcagaacaag 682

                                             
Query: 776 aacctaactgaagttgggtttgagcacctgtatc 809
           ||| |  ||||| |||| ||||||||||||||||
Sbjct: 681 aacgtcgctgaacttggttttgagcacctgtatc 648



 Score = 52.0 bits (26), Expect = 0.006
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 857 aagccagttgttctcttcagaacttgggcgcctgaccactttgagaatggcgagtggttc 916
           ||||||||  || ||||||| || ||| | ||||| ||||| ||| |||| |||||||||
Sbjct: 600 aagccagtaattttcttcaggacctggtcacctgatcacttcgaggatggagagtggttc 541

                                                             
Query: 917 agcggtggaacctgtaatagggtattgccttacaagaagggagagtacag 966
           ||||||||  | |||   |||  |||||| ||||| ||||||||||||||
Sbjct: 540 agcggtgggtcttgtcgcaggaaattgccctacaacaagggagagtacag 491
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>emb|AJ011801.1|STU011801 Solanum tuberosum rx gene
          Length = 18284

 Score = 48.1 bits (24), Expect = 0.096
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 345   aatgtgatttgcaaccgtttgatgaaat 372
             |||||||||||||||||||| |||||||
Sbjct: 15850 aatgtgatttgcaaccgttttatgaaat 15877



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 346   atgtgatttgcaaccgtttgatgaaa 371
             ||||||||||||||||||| ||||||
Sbjct: 11911 atgtgatttgcaaccgttttatgaaa 11936
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>gb|DQ068125.1| Brassica napus isolate mutant Cr3529 clone Bncr17 unknown mRNA
          Length = 352

 Score = 46.1 bits (23), Expect = 0.38
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 1157 gttcagaatgattgcctgcattggtgc 1183
            |||||||||||||| ||||||||||||
Sbjct: 222  gttcagaatgattgtctgcattggtgc 248
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>ref|NM_116338.2| Arabidopsis thaliana unknown protein (AT4G01080) mRNA, complete cds
          Length = 1582

 Score = 46.1 bits (23), Expect = 0.38
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 1157 gttcagaatgattgcctgcattggtgc 1183
            |||||||||||||| ||||||||||||
Sbjct: 1234 gttcagaatgattgtctgcattggtgc 1260
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>gb|BT015944.1| Arabidopsis thaliana At4g01080 mRNA, complete cds
          Length = 1329

 Score = 46.1 bits (23), Expect = 0.38
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 1157 gttcagaatgattgcctgcattggtgc 1183
            |||||||||||||| ||||||||||||
Sbjct: 1216 gttcagaatgattgtctgcattggtgc 1242
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>gb|AF265664.1| Solanum tuberosum resistance gene cluster, complete sequence
          Length = 187352

 Score = 46.1 bits (23), Expect = 0.38
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 346   atgtgatttgcaaccgtttgatgaaat 372
             ||||||||||||||||||| |||||||
Sbjct: 43425 atgtgatttgcaaccgttttatgaaat 43399



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 346   atgtgatttgcaaccgtttgatgaaa 371
             ||||||||||||||||||| ||||||
Sbjct: 46979 atgtgatttgcaaccgttttatgaaa 46954



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 346    atgtgatttgcaaccgtttgatgaaa 371
              ||||||||||||||||||| ||||||
Sbjct: 116951 atgtgatttgcaaccgttttatgaaa 116926



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 346    atgtgatttgcaaccgtttgatgaaa 371
              ||||||||||||||||||| ||||||
Sbjct: 151444 atgtgatttgcaaccgttttatgaaa 151419
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>emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 3
          Length = 196149

 Score = 46.1 bits (23), Expect = 0.38
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 1157  gttcagaatgattgcctgcattggtgc 1183
             |||||||||||||| ||||||||||||
Sbjct: 80453 gttcagaatgattgtctgcattggtgc 80427
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>gb|BT003985.1| Arabidopsis thaliana clone RAFL15-13-H20 (R20815) unknown protein
            (At4g01080) mRNA, complete cds
          Length = 1506

 Score = 46.1 bits (23), Expect = 0.38
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 1157 gttcagaatgattgcctgcattggtgc 1183
            |||||||||||||| ||||||||||||
Sbjct: 1234 gttcagaatgattgtctgcattggtgc 1260
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>emb|BX828742.1|CNS0A3K4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL34ZG11 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1518

 Score = 46.1 bits (23), Expect = 0.38
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 1157 gttcagaatgattgcctgcattggtgc 1183
            |||||||||||||| ||||||||||||
Sbjct: 1209 gttcagaatgattgtctgcattggtgc 1235
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>gb|AY952464.1| Brassica napus mutant Cr3529 unknown protein Cr17 mRNA, complete cds
          Length = 1343

 Score = 46.1 bits (23), Expect = 0.38
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 1157 gttcagaatgattgcctgcattggtgc 1183
            |||||||||||||| ||||||||||||
Sbjct: 1213 gttcagaatgattgtctgcattggtgc 1239
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>gb|AF007269.1|IG002N01 Arabidopsis thaliana BAC IG002N01
          Length = 124225

 Score = 46.1 bits (23), Expect = 0.38
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 1157   gttcagaatgattgcctgcattggtgc 1183
              |||||||||||||| ||||||||||||
Sbjct: 107242 gttcagaatgattgtctgcattggtgc 107268
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>gb|BT017458.1| Zea mays clone EL01N0407C06.c mRNA sequence
          Length = 1160

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 704 caatggtttctcaagactgcggtttactgggagaatgg 741
           ||||||||  |||||||||| || ||||||||||||||
Sbjct: 368 caatggttcttcaagactgcagtgtactgggagaatgg 405



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 896 tttgagaatggcgagtggttcagcgg 921
           |||||||| |||||||||||||||||
Sbjct: 560 tttgagaacggcgagtggttcagcgg 585
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>gb|AC120148.13| Mus musculus chromosome 9, clone RP24-225E14, complete sequence
          Length = 201783

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 644    cttgaaccaacctggataagtc 665
              ||||||||||||||||||||||
Sbjct: 154504 cttgaaccaacctggataagtc 154525
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>gb|AC124359.3| Mus musculus BAC clone RP24-495G2 from chromosome 1, complete sequence
          Length = 174750

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 146    ctctccttatcttcctccttgtctct 171
              |||||||| |||||||||||||||||
Sbjct: 138301 ctctccttctcttcctccttgtctct 138326
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>ref|NM_001033983.1| Mus musculus RIKEN cDNA 7420426K07 gene (7420426K07Rik), mRNA
 dbj|AK135855.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
            enriched library, clone:7420426K07 product:hypothetical
            Proline-rich region profile containing protein, full
            insert sequence
          Length = 1510

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 644  cttgaaccaacctggataagtc 665
            ||||||||||||||||||||||
Sbjct: 1135 cttgaaccaacctggataagtc 1114
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>gb|AF266747.1| Solanum tuberosum RGC1 (RGC1) gene, partial cds
          Length = 3146

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 346 atgtgatttgcaaccgtttgatgaaa 371
           ||||||||||||||||||| ||||||
Sbjct: 63  atgtgatttgcaaccgttttatgaaa 88
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>emb|AJ249448.1|SAC249448 Solanum acaule Rx2.ac15 gene for NBS-LRR protein, exons 1-3
          Length = 3229

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 346 atgtgatttgcaaccgtttgatgaaa 371
           ||||||||||||||||||| ||||||
Sbjct: 100 atgtgatttgcaaccgttttatgaaa 125
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>emb|AJ249449.1|STU249449 Solanum tuberosum GPA2 gene for NBS-LRR protein, exons 1-3
          Length = 3254

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 346 atgtgatttgcaaccgtttgatgaaa 371
           ||||||||||||||||||| ||||||
Sbjct: 109 atgtgatttgcaaccgttttatgaaa 134
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>gb|AF195939.1|AF195939 Solanum tuberosum disease resistance protein Gpa2 gene, complete cds
          Length = 10331

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 346  atgtgatttgcaaccgtttgatgaaa 371
            ||||||||||||||||||| ||||||
Sbjct: 4938 atgtgatttgcaaccgttttatgaaa 4963
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>gb|AC140454.4| Mus musculus BAC clone RP24-163I14 from 1, complete sequence
          Length = 171533

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 146  ctctccttatcttcctccttgtctct 171
            |||||||| |||||||||||||||||
Sbjct: 6704 ctctccttctcttcctccttgtctct 6729
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>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome
          Length = 9965640

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 119    gtggtcgccgtgggcggcgtggccg 143
              |||||||| ||||||||||||||||
Sbjct: 852779 gtggtcgcggtgggcggcgtggccg 852803
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>ref|NM_001054539.1| Oryza sativa (japonica cultivar-group) Os02g0729100 (Os02g0729100)
            mRNA, complete cds
          Length = 1251

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 1166 gattgcctgcattggtgcgtgccagggcc 1194
            |||||||||||||||||| |||| |||||
Sbjct: 1174 gattgcctgcattggtgcttgccggggcc 1202
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>gb|AC183775.2| Pan troglodytes chromosome X clone CH251-286C11 map human ortholog
             p11.4, complete sequence
          Length = 181371

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 361   gtttgatgaaattagatttct 381
             |||||||||||||||||||||
Sbjct: 57552 gtttgatgaaattagatttct 57572
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>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome
          Length = 7804765

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 117     aggtggtcgccgtgggcggcg 137
               |||||||||||||||||||||
Sbjct: 5840731 aggtggtcgccgtgggcggcg 5840751
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>gb|AC175194.2| Sporobolomyces roseus clone JGIBAIF-13P11, complete sequence
          Length = 39847

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 549  tgtccctcgtttgggctcccttcctcgtc 577
            |||||||| ||||| ||||||||||||||
Sbjct: 7284 tgtccctcttttggcctcccttcctcgtc 7256
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>gb|AC164119.4| Mus musculus BAC clone RP24-288I15 from chromosome 5, complete sequence
          Length = 189243

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1374  gaatatgcaagtgtgtacatt 1394
             |||||||||||||||||||||
Sbjct: 59455 gaatatgcaagtgtgtacatt 59435
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>gb|AC171263.1| Pan troglodytes chromosome X clone PTB-018K13 map human ortholog p11.4,
              complete sequence
          Length = 147595

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 361    gtttgatgaaattagatttct 381
              |||||||||||||||||||||
Sbjct: 110158 gtttgatgaaattagatttct 110178
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>gb|AC150208.1| Pan troglodytes chromosome X clone PTB-043C05 map human ortholog p21.3,
             complete sequence
          Length = 194447

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 578   aaatcagaggtttttgaaaatgagaatgg 606
             ||||||||||||||| ||||| |||||||
Sbjct: 49289 aaatcagaggttttttaaaataagaatgg 49317
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>gb|AC015743.9| Homo sapiens chromosome 8, clone RP11-1G11, complete sequence
          Length = 193989

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 154    atcttcctccttgtctctgcc 174
              |||||||||||||||||||||
Sbjct: 149709 atcttcctccttgtctctgcc 149689
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 1166     gattgcctgcattggtgcgtgccagggcc 1194
                |||||||||||||||||| |||| |||||
Sbjct: 30362860 gattgcctgcattggtgcttgccggggcc 30362888
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>emb|AL627402.10| Human DNA sequence from clone RP11-204C16 on chromosome X Contains part
              of the CASK gene for calcium/calmodulin-dependent serine
              protein kinase (MAGUK family), the GPR34 gene for G
              protein-coupled receptor 34, the GPR82 gene for G
              protein-coupled receptor 82, a tyrosine
              3-monooxygenase/tryptophan 5-monooxygenase activation
              protein, zeta polypeptide (YWHAZ) pseudogene and a CpG
              island, complete sequence
          Length = 132290

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 361    gtttgatgaaattagatttct 381
              |||||||||||||||||||||
Sbjct: 118457 gtttgatgaaattagatttct 118477
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>gb|AF390900.1|AF390897S4 Mus musculus germ cell nuclear factor (Nr6a1) gene, exons 6 through 12
             and complete cds, alternatively transcribed
          Length = 31288

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 380   ctaggtgctatgaggaacaaa 400
             |||||||||||||||||||||
Sbjct: 11165 ctaggtgctatgaggaacaaa 11185
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>emb|BX957316.7| Zebrafish DNA sequence from clone CH211-120B19 in linkage group 8,
             complete sequence
          Length = 144967

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1468  aaatgtcgatgcgtttggatgcagt 1492
             ||||||||||||||||| |||||||
Sbjct: 13195 aaatgtcgatgcgtttgcatgcagt 13219
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>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0072H09
          Length = 160541

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 1166  gattgcctgcattggtgcgtgccagggcc 1194
             |||||||||||||||||| |||| |||||
Sbjct: 43720 gattgcctgcattggtgcttgccggggcc 43748
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>emb|AL844842.29| Mouse DNA sequence from clone RP23-354G20 on chromosome 2, complete
              sequence
          Length = 228433

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 380    ctaggtgctatgaggaacaaa 400
              |||||||||||||||||||||
Sbjct: 149701 ctaggtgctatgaggaacaaa 149681
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>emb|CT571243.9| Mouse DNA sequence from clone RP23-122I21 on chromosome 9, complete
              sequence
          Length = 158763

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 1369   gtgaagaatatgcaagtgtgtacat 1393
              ||||||||||||||| |||||||||
Sbjct: 125432 gtgaagaatatgcaattgtgtacat 125408
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>gb|AC015564.13| Homo sapiens chromosome 8, clone RP11-351D9, complete sequence
          Length = 193425

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 154   atcttcctccttgtctctgcc 174
             |||||||||||||||||||||
Sbjct: 34852 atcttcctccttgtctctgcc 34832
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>gb|AC171204.1| Mus musculus BAC clone RP23-312J21 from chromosome 9, complete sequence
          Length = 223399

 Score = 42.1 bits (21), Expect = 5.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 1369   gtgaagaatatgcaagtgtgtacat 1393
              ||||||||||||||| |||||||||
Sbjct: 170265 gtgaagaatatgcaattgtgtacat 170241


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 260,911,661
Number of extensions: 13354998
Number of successful extensions: 248617
Number of sequences better than 10.0: 43
Number of HSP's gapped: 248612
Number of HSP's successfully gapped: 58
Length of query: 1556
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1533
Effective length of database: 18,503,978,556
Effective search space: 28366599126348
Effective search space used: 28366599126348
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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