ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf36c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK068739:Os01g0237100 31 5.4
2AK061293:Os03g0302800 31 5.4
3AK060943:Os01g0237100 31 5.4
4AK099042:Os02g0815600 31 7.1
5AK059429:Os02g0815600 31 7.1 
>AK068739:Os01g0237100 |
          Length = 303
 Score = 31.2 bits (69), Expect = 5.4
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 385 RGLWGPCGVR-PRVLATPSRRLELLSPLHFLHVLICTTTGLPP 510
           R LWG        +L TP   + +++    L  LICT  GLPP
Sbjct: 218 RKLWGTAREAWKEILLTPGENMLVVTHKSILRALICTALGLPP 260
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>AK061293:Os03g0302800 |
          Length = 214

 Score = 31.2 bits (69), Expect = 5.4
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 12/59 (20%)
 Frame = +1

Query: 3163 RIDWLRYGELEF------------PCTHMLQFILCIASFAPNILPGVYGNNQYFFDAAR 3303
            R D L YGE E+            P   +L+ I CIA   P+  PG+YG+   +F A R
Sbjct: 64   RGDRLGYGEREYSIEETPAFRFRTPSARVLRLIPCIAPAVPD-TPGLYGDEDRYFFARR 121
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>AK060943:Os01g0237100 |
          Length = 303

 Score = 31.2 bits (69), Expect = 5.4
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 385 RGLWGPCGVR-PRVLATPSRRLELLSPLHFLHVLICTTTGLPP 510
           R LWG        +L TP   + +++    L  LICT  GLPP
Sbjct: 218 RKLWGTAREAWKEILLTPGENMLVVTHKSILRALICTALGLPP 260
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>AK099042:Os02g0815600 |
          Length = 474

 Score = 30.8 bits (68), Expect = 7.1
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = +2

Query: 350 GSGSHHDIGCASGGYGDRAVSGQ---GFSRRQAVDWSCC 457
           GSG+  D GC++GG  D+   G+    +  +   DW+ C
Sbjct: 407 GSGTSTDCGCSNGGCADKDFGGEYPMDYYSQDGGDWNSC 445
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>AK059429:Os02g0815600 |
          Length = 474

 Score = 30.8 bits (68), Expect = 7.1
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = +2

Query: 350 GSGSHHDIGCASGGYGDRAVSGQ---GFSRRQAVDWSCC 457
           GSG+  D GC++GG  D+   G+    +  +   DW+ C
Sbjct: 407 GSGTSTDCGCSNGGCADKDFGGEYPMDYYSQDGGDWNSC 445


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 102,489,388
Number of extensions: 2414044
Number of successful extensions: 7072
Number of sequences better than 10.0: 5
Number of HSP's gapped: 7053
Number of HSP's successfully gapped: 5
Length of query: 1205
Length of database: 15,399,855
Length adjustment: 112
Effective length of query: 1093
Effective length of database: 10,915,263
Effective search space: 11930382459
Effective search space used: 11930382459
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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