ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf38n08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK104356:Os02g0750600 | 219 | 2e-57 | 2 | AK104230:Os02g0750600 | 219 | 2e-57 | 3 | AK066145:Os02g0750600 | 219 | 2e-57 | 4 | AK061083:Os06g0224100 | 143 | 2e-34 | 5 | AK099511:Os03g0426800 | 137 | 1e-32 | 6 | AK104201:Os04g0393300 | 136 | 3e-32 | 7 | AK099168:Os04g0393300 | 136 | 3e-32 | 8 | AK059881:Os04g0393300 | 136 | 3e-32 | 9 | AK121490:Os12g0141900 | 123 | 2e-28 | 10 | AK061405:Os04g0393300 | 118 | 8e-27 | 11 | AK069799:Os07g0464600 | 31 | 1.6 | 12 | AK067140:Os07g0464600 | 31 | 1.6 | 13 | Os04g0571600:Os04g0571600 | 30 | 2.1 | 14 | Os07g0489900:Os07g0489900 | 25 | 3.5 | 15 | AK119922:Os04g0116800 | 29 | 4.6 | 16 | AK100666:Os06g0524300 | 29 | 4.6 | 17 | AK065750:Os01g0126600 | 29 | 6.1 |
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>AK104356:Os02g0750600 | Length = 119 Score = 219 bits (558), Expect = 2e-57 Identities = 105/119 (88%), Positives = 115/119 (96%), Gaps = 1/119 (0%) Frame = +1 Query: 280 MAGGKEPIEVKFRLFDGTDIGPNKYDPATTVTALKEFVLARWPQDKDIVPKTLNDVKLIN 459 MAGGKEPIEVKFRLFDGTDIGP+KYDP+TTV+ALKEF+LARWPQDK+I PKT+ND+KLIN Sbjct: 1 MAGGKEPIEVKFRLFDGTDIGPSKYDPSTTVSALKEFILARWPQDKEITPKTVNDLKLIN 60 Query: 460 AGRILENNKTLAESRVPVGEVPGGVITMHVVVRPPQSDK-SDKHLSNSPKQNRCGCTIL 633 AGRILENN+TLAESRVPVGEVPGGVITMHVVVRPPQ DK S+K L+NSPKQNRCGCTIL Sbjct: 61 AGRILENNRTLAESRVPVGEVPGGVITMHVVVRPPQPDKNSEKQLANSPKQNRCGCTIL 119
>AK104230:Os02g0750600 | Length = 119 Score = 219 bits (558), Expect = 2e-57 Identities = 105/119 (88%), Positives = 115/119 (96%), Gaps = 1/119 (0%) Frame = +1 Query: 280 MAGGKEPIEVKFRLFDGTDIGPNKYDPATTVTALKEFVLARWPQDKDIVPKTLNDVKLIN 459 MAGGKEPIEVKFRLFDGTDIGP+KYDP+TTV+ALKEF+LARWPQDK+I PKT+ND+KLIN Sbjct: 1 MAGGKEPIEVKFRLFDGTDIGPSKYDPSTTVSALKEFILARWPQDKEITPKTVNDLKLIN 60 Query: 460 AGRILENNKTLAESRVPVGEVPGGVITMHVVVRPPQSDK-SDKHLSNSPKQNRCGCTIL 633 AGRILENN+TLAESRVPVGEVPGGVITMHVVVRPPQ DK S+K L+NSPKQNRCGCTIL Sbjct: 61 AGRILENNRTLAESRVPVGEVPGGVITMHVVVRPPQPDKNSEKQLANSPKQNRCGCTIL 119
>AK066145:Os02g0750600 | Length = 119 Score = 219 bits (558), Expect = 2e-57 Identities = 105/119 (88%), Positives = 115/119 (96%), Gaps = 1/119 (0%) Frame = +1 Query: 280 MAGGKEPIEVKFRLFDGTDIGPNKYDPATTVTALKEFVLARWPQDKDIVPKTLNDVKLIN 459 MAGGKEPIEVKFRLFDGTDIGP+KYDP+TTV+ALKEF+LARWPQDK+I PKT+ND+KLIN Sbjct: 1 MAGGKEPIEVKFRLFDGTDIGPSKYDPSTTVSALKEFILARWPQDKEITPKTVNDLKLIN 60 Query: 460 AGRILENNKTLAESRVPVGEVPGGVITMHVVVRPPQSDK-SDKHLSNSPKQNRCGCTIL 633 AGRILENN+TLAESRVPVGEVPGGVITMHVVVRPPQ DK S+K L+NSPKQNRCGCTIL Sbjct: 61 AGRILENNRTLAESRVPVGEVPGGVITMHVVVRPPQPDKNSEKQLANSPKQNRCGCTIL 119
>AK061083:Os06g0224100 | Length = 126 Score = 143 bits (361), Expect = 2e-34 Identities = 73/123 (59%), Positives = 91/123 (73%), Gaps = 2/123 (1%) Frame = +1 Query: 271 GAEMAGGKEPIEVKFRLFDGTDIGPNKYDPATTVTALKEFVLARWPQDKDIVPKTLNDVK 450 G GG E +EV+FRL DG+DIGP+ +D ATTVTALKEFVLARWPQ K+I P+T+NDV Sbjct: 4 GGGGGGGMEAVEVRFRLDDGSDIGPSMHDQATTVTALKEFVLARWPQGKEIAPRTVNDVT 63 Query: 451 LINAGRILENNKTLAESRVPVGEVPGGVITMHVVVRPPQSDKSDKH--LSNSPKQNRCGC 624 +INAG++LENN+TLAESR E P G ITMHVVVR + ++ K + P++ CGC Sbjct: 64 IINAGQVLENNRTLAESRNLAAESPEGPITMHVVVRRSRPERRVKQPPKARPPERIGCGC 123 Query: 625 TIL 633 TIL Sbjct: 124 TIL 126
>AK099511:Os03g0426800 | Length = 119 Score = 137 bits (345), Expect = 1e-32 Identities = 69/120 (57%), Positives = 93/120 (77%), Gaps = 2/120 (1%) Frame = +1 Query: 280 MAGG-KEPIEVKFRLFDGTDIGPNKYDPATTVTALKEFVLARWPQDKDIVPKTLNDVKLI 456 M+GG +E E+KFRL DGTDIGP +Y A+TV LKE ++A+WP+DK+ P+T+ND+KLI Sbjct: 1 MSGGVQEQFEIKFRLPDGTDIGPKRYPAASTVATLKESIVAQWPKDKEKGPRTVNDLKLI 60 Query: 457 NAGRILENNKTLAESRVPVGEVPGGVITMHVVVRPPQSDK-SDKHLSNSPKQNRCGCTIL 633 NAG+ILENNKTL+E + P+ + G+ TMHVVVR P SDK S+K ++ PK RCGC+I+ Sbjct: 61 NAGKILENNKTLSECKSPICDF-SGLTTMHVVVRAPTSDKQSNKIVAKKPKDFRCGCSIM 119
>AK104201:Os04g0393300 | Length = 135 Score = 136 bits (342), Expect = 3e-32 Identities = 73/127 (57%), Positives = 90/127 (70%), Gaps = 2/127 (1%) Frame = +1 Query: 259 AIRPGAEMAGGKEPIEVKFRLFDGTDIGPNKYDP-ATTVTALKEFVLARWPQDKDIVPKT 435 A GAE A E +EVKFRLFDG+DIGP + + ATTV ALK+ V+A WP+DK IVPKT Sbjct: 10 AAEGGAE-AEADEEVEVKFRLFDGSDIGPLRCNAVATTVAALKDRVVADWPKDKTIVPKT 68 Query: 436 LNDVKLINAGRILENNKTLAESRVPVGEVPGGVITMHVVVRPPQS-DKSDKHLSNSPKQN 612 NDVKLI+ G+ILEN+K +A+ R P G++P ITMHVVV+P + K DK + PK Sbjct: 69 ANDVKLISGGKILENDKNIAQCRAPFGDLPSTAITMHVVVQPSSAKSKPDKKTNKLPKTT 128 Query: 613 RCGCTIL 633 RC CTIL Sbjct: 129 RCSCTIL 135
>AK099168:Os04g0393300 | Length = 135 Score = 136 bits (342), Expect = 3e-32 Identities = 73/127 (57%), Positives = 90/127 (70%), Gaps = 2/127 (1%) Frame = +1 Query: 259 AIRPGAEMAGGKEPIEVKFRLFDGTDIGPNKYDP-ATTVTALKEFVLARWPQDKDIVPKT 435 A GAE A E +EVKFRLFDG+DIGP + + ATTV ALK+ V+A WP+DK IVPKT Sbjct: 10 AAEGGAE-AEADEEVEVKFRLFDGSDIGPLRCNAVATTVAALKDRVVADWPKDKTIVPKT 68 Query: 436 LNDVKLINAGRILENNKTLAESRVPVGEVPGGVITMHVVVRPPQS-DKSDKHLSNSPKQN 612 NDVKLI+ G+ILEN+K +A+ R P G++P ITMHVVV+P + K DK + PK Sbjct: 69 ANDVKLISGGKILENDKNIAQCRAPFGDLPSTAITMHVVVQPSSAKSKPDKKTNKLPKTT 128 Query: 613 RCGCTIL 633 RC CTIL Sbjct: 129 RCSCTIL 135
>AK059881:Os04g0393300 | Length = 135 Score = 136 bits (342), Expect = 3e-32 Identities = 73/127 (57%), Positives = 90/127 (70%), Gaps = 2/127 (1%) Frame = +1 Query: 259 AIRPGAEMAGGKEPIEVKFRLFDGTDIGPNKYDP-ATTVTALKEFVLARWPQDKDIVPKT 435 A GAE A E +EVKFRLFDG+DIGP + + ATTV ALK+ V+A WP+DK IVPKT Sbjct: 10 AAEGGAE-AEADEEVEVKFRLFDGSDIGPLRCNAVATTVAALKDRVVADWPKDKTIVPKT 68 Query: 436 LNDVKLINAGRILENNKTLAESRVPVGEVPGGVITMHVVVRPPQS-DKSDKHLSNSPKQN 612 NDVKLI+ G+ILEN+K +A+ R P G++P ITMHVVV+P + K DK + PK Sbjct: 69 ANDVKLISGGKILENDKNIAQCRAPFGDLPSTAITMHVVVQPSSAKSKPDKKTNKLPKTT 128 Query: 613 RCGCTIL 633 RC CTIL Sbjct: 129 RCSCTIL 135
>AK121490:Os12g0141900 | Length = 101 Score = 123 bits (308), Expect = 2e-28 Identities = 60/82 (73%), Positives = 72/82 (87%) Frame = +1 Query: 361 ATTVTALKEFVLARWPQDKDIVPKTLNDVKLINAGRILENNKTLAESRVPVGEVPGGVIT 540 +TTV+ALKEF+LARWPQDK+I PKT+ND+KLINAGRILENN+TL ESRV V EVPGGVIT Sbjct: 16 STTVSALKEFILARWPQDKEITPKTVNDLKLINAGRILENNRTLVESRVRV-EVPGGVIT 74 Query: 541 MHVVVRPPQSDKSDKHLSNSPK 606 MHVVV PPQSDK+ + + + + Sbjct: 75 MHVVVHPPQSDKNKRRRNKNQR 96
>AK061405:Os04g0393300 | Length = 132 Score = 118 bits (295), Expect = 8e-27 Identities = 62/102 (60%), Positives = 77/102 (75%), Gaps = 1/102 (0%) Frame = +1 Query: 259 AIRPGAEMAGGKEPIEVKFRLFDGTDIGPNKYDP-ATTVTALKEFVLARWPQDKDIVPKT 435 A GAE A E +EVKFRLFDG+DIGP + + ATTV ALK+ V+A WP+DK IVPKT Sbjct: 10 AAEGGAE-AEADEEVEVKFRLFDGSDIGPLRCNAVATTVAALKDRVVADWPKDKTIVPKT 68 Query: 436 LNDVKLINAGRILENNKTLAESRVPVGEVPGGVITMHVVVRP 561 NDVKLI+ G+ILEN+K +A+ R P G++P ITMHVVV+P Sbjct: 69 ANDVKLISGGKILENDKNIAQCRAPFGDLPSTAITMHVVVQP 110
>AK069799:Os07g0464600 | Length = 690 Score = 30.8 bits (68), Expect = 1.6 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -1 Query: 377 AVTVVAGSYLLGPM-SVPSNRRNFTSIGSFPPAISAPGRIAPRRKIPTTA 231 A++ + LL P S S+R N T +FP IS PGR APR I A Sbjct: 2 AISTWSTRLLLSPSASASSHRPNPTRRLAFPSPISGPGRQAPRAYISAPA 51
>AK067140:Os07g0464600 | Length = 690 Score = 30.8 bits (68), Expect = 1.6 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -1 Query: 377 AVTVVAGSYLLGPM-SVPSNRRNFTSIGSFPPAISAPGRIAPRRKIPTTA 231 A++ + LL P S S+R N T +FP IS PGR APR I A Sbjct: 2 AISTWSTRLLLSPSASASSHRPNPTRRLAFPSPISGPGRQAPRAYISAPA 51
>Os04g0571600:Os04g0571600 | Length = 883 Score = 30.4 bits (67), Expect = 2.1 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -2 Query: 235 PPAQWTAAEGFRGAKKSCRIRRGEGKNRCGSHEGQDPL 122 PP Q T A G RG ++ R R+ EG+ R G + +D + Sbjct: 831 PPLQPTLAAGRRGERERERERKREGRKRGGRRKREDDM 868
>Os07g0489900:Os07g0489900 | Length = 653 Score = 25.0 bits (53), Expect(2) = 3.5 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 3/29 (10%) Frame = +1 Query: 496 ESRVPVG---EVPGGVITMHVVVRPPQSD 573 + RVP G E P G + HV +R P D Sbjct: 232 QRRVPAGVRQEAPHGAVAQHVPLRRPPHD 260 Score = 23.1 bits (48), Expect(2) = 3.5 Identities = 11/22 (50%), Positives = 11/22 (50%) Frame = +3 Query: 354 RPRHHRHRAQGVRPRSVAAG*R 419 RP H RH G R V AG R Sbjct: 219 RPAHRRHALDGGLQRRVPAGVR 240
>AK119922:Os04g0116800 | Length = 449 Score = 29.3 bits (64), Expect = 4.6 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Frame = -1 Query: 530 PPGTSPTGTRDSARVLLFSSILPALMSFTSL---RVFGTMSLSCGHRARTNSLSAVTV 366 PP + +R+ A +++FS++ A + T L GT+ L+C T SL+ V V Sbjct: 147 PPESGIEASREEAELVIFSAVDKAFAAATGLVPADDIGTVILACSFTTPTPSLADVVV 204
>AK100666:Os06g0524300 | Length = 811 Score = 29.3 bits (64), Expect = 4.6 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = -1 Query: 920 HYTMSTS*KQQRVPQLLTFLHTRYSLHGYVEGPLP 816 H++ S + + +PQ+ L TR +LHGY E P+P Sbjct: 269 HHSPSLNVQSPNIPQVHAPLPTRQNLHGYAE-PIP 302
>AK065750:Os01g0126600 | Length = 403 Score = 28.9 bits (63), Expect = 6.1 Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 4/95 (4%) Frame = -2 Query: 868 LSCILVTAYMDMWKGPCRNQTLP----SSRDEIYVGVKLPPLGFSRIGLQESIVRVKTCN 701 LS L Y +M NQ L S DE+ K+ GF I + + + +K Sbjct: 216 LSEELKDKYAEMESIESLNQALVIKERQSNDELQHARKVLIEGFQDIIVGRTNIGIKRMG 275 Query: 700 RCEHGWMAPIYRNTQRGLNRSVTISCTHICSAWEN 596 + Y+ QR L +S +CS WEN Sbjct: 276 VIDFKAFTNAYK--QRSLEEDADVSAAELCSLWEN 308 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 27,034,252 Number of extensions: 615292 Number of successful extensions: 2005 Number of sequences better than 10.0: 17 Number of HSP's gapped: 1988 Number of HSP's successfully gapped: 18 Length of query: 338 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 237 Effective length of database: 11,355,714 Effective search space: 2691304218 Effective search space used: 2691304218 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
