ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf38m17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK064962:Os04g0683100 | 396 | e-110 | 2 | AK104757:Os04g0683100 | 374 | e-104 | 3 | AK060155:Os04g0683100 | 374 | e-104 | 4 | AK109009: | 225 | 3e-59 | 5 | AK099189:Os08g0398800 | 189 | 2e-48 | 6 | AK061260:Os08g0398800 | 189 | 2e-48 | 7 | AY428025:Os08g0465800 | 31 | 1.5 | 8 | AK107132:Os06g0625900 | 30 | 2.0 | 9 | AJ427972:Os06g0625900 | 30 | 2.0 | 10 | AK122178:Os06g0106800 | 30 | 2.6 | 11 | AK105911:Os06g0106800 | 30 | 2.6 | 12 | AK105782:Os06g0106800 | 30 | 2.6 | 13 | AK105650:Os06g0106800 | 30 | 2.6 | 14 | AK073364:Os06g0106800 | 30 | 2.6 | 15 | Os08g0419800:Os08g0419800 | 29 | 4.4 | 16 | AK105935:Os08g0562100 | 29 | 5.8 | 17 | AK102598:Os08g0562100 | 29 | 5.8 | 18 | AK071494:Os08g0562100 | 29 | 5.8 | 19 | AK067298:Os05g0397700 | 28 | 9.9 | 20 | AK069639:Os08g0230200 | 28 | 9.9 | 21 | AK068251:Os04g0606500 | 28 | 9.9 | 22 | AK060252:Os08g0230200 | 28 | 9.9 |
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>AK064962:Os04g0683100 | Length = 259 Score = 396 bits (1017), Expect = e-110 Identities = 189/202 (93%), Positives = 195/202 (96%) Frame = +1 Query: 154 GEEVVGAPSSPVVNVYPLANYTFGTKEAKMEKDTSVADRLARMKVNYMKEGMRTSVEAIL 333 GE + + SSPVVNVYPLANYTFGTKE KMEKDTSVADR ARMKVNYMKEGMRTSVEAIL Sbjct: 54 GEGKMVSSSSPVVNVYPLANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAIL 113 Query: 334 LVQEHNHPHILLLQIGNTFCKLPGGRLKPGESEIEGLKRKLCSKLAVNSPSFPPNWQVGE 513 LVQEHNHPHILLLQIGNTFCKLPGGRLKPGE+EIEGLKRKLCSKLAVNSPSFPPNWQVGE Sbjct: 114 LVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGE 173 Query: 514 CVAEWWRPNFETVMYPYCPPHISKPKECKKLFIVHLTEREYFAVPRNLRLLAVPLFELYD 693 CVA WWRPNFETVMYPYCPPHI+KPKECKKLFIVHL+EREYFAVPRNL+LLAVPLFELYD Sbjct: 174 CVAVWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYD 233 Query: 694 NVQRYGPVISTIPQQLSRFQFN 759 NVQRYGPVISTIPQQLSRFQFN Sbjct: 234 NVQRYGPVISTIPQQLSRFQFN 255
>AK104757:Os04g0683100 | Length = 188 Score = 374 bits (961), Expect = e-104 Identities = 177/184 (96%), Positives = 181/184 (98%) Frame = +1 Query: 208 ANYTFGTKEAKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNT 387 ANYTFGTKE KMEKDTSVADR ARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNT Sbjct: 1 ANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNT 60 Query: 388 FCKLPGGRLKPGESEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAEWWRPNFETVMYPYC 567 FCKLPGGRLKPGE+EIEGLKRKLCSKLAVNSPSFPPNWQVGECVA WWRPNFETVMYPYC Sbjct: 61 FCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMYPYC 120 Query: 568 PPHISKPKECKKLFIVHLTEREYFAVPRNLRLLAVPLFELYDNVQRYGPVISTIPQQLSR 747 PPHI+KPKECKKLFIVHL+EREYFAVPRNL+LLAVPLFELYDNVQRYGPVISTIPQQLSR Sbjct: 121 PPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPVISTIPQQLSR 180 Query: 748 FQFN 759 FQFN Sbjct: 181 FQFN 184
>AK060155:Os04g0683100 | Length = 188 Score = 374 bits (961), Expect = e-104 Identities = 177/184 (96%), Positives = 181/184 (98%) Frame = +1 Query: 208 ANYTFGTKEAKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNT 387 ANYTFGTKE KMEKDTSVADR ARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNT Sbjct: 1 ANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNT 60 Query: 388 FCKLPGGRLKPGESEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAEWWRPNFETVMYPYC 567 FCKLPGGRLKPGE+EIEGLKRKLCSKLAVNSPSFPPNWQVGECVA WWRPNFETVMYPYC Sbjct: 61 FCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMYPYC 120 Query: 568 PPHISKPKECKKLFIVHLTEREYFAVPRNLRLLAVPLFELYDNVQRYGPVISTIPQQLSR 747 PPHI+KPKECKKLFIVHL+EREYFAVPRNL+LLAVPLFELYDNVQRYGPVISTIPQQLSR Sbjct: 121 PPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPVISTIPQQLSR 180 Query: 748 FQFN 759 FQFN Sbjct: 181 FQFN 184
>AK109009: | Length = 274 Score = 225 bits (574), Expect = 3e-59 Identities = 103/194 (53%), Positives = 137/194 (70%), Gaps = 5/194 (2%) Frame = +1 Query: 190 VNVYPLANYTFGTKEAKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 369 + +YPL+NYTFGTK+ + E+D SV RL R++ +Y + GMR + E IL+ EHNHPHIL+ Sbjct: 29 IRLYPLSNYTFGTKDGQPEEDPSVLARLKRLEEHYAEHGMRRTCEGILVCHEHNHPHILM 88 Query: 370 LQIGNTFCKLPGGRLKPGESEIEGLKRKLCSKLAVNSPSFP-----PNWQVGECVAEWWR 534 LQI N F KLPG L+ + EIEG K +L S+LA F W+VG+ +A+WWR Sbjct: 89 LQIANAFFKLPGDYLRAEDDEIEGFKARLNSRLAPTGTQFTGEGVNDEWEVGDTLAQWWR 148 Query: 535 PNFETVMYPYCPPHISKPKECKKLFIVHLTEREYFAVPRNLRLLAVPLFELYDNVQRYGP 714 PNFET MYP+ P H+++PKECKKL+ + L + +VP+N++LLAVPLFELYDN RYGP Sbjct: 149 PNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVPLFELYDNTARYGP 208 Query: 715 VISTIPQQLSRFQF 756 +S IP LSR+ F Sbjct: 209 QLSAIPHLLSRYNF 222
>AK099189:Os08g0398800 | Length = 226 Score = 189 bits (481), Expect = 2e-48 Identities = 96/218 (44%), Positives = 132/218 (60%), Gaps = 17/218 (7%) Frame = +1 Query: 157 EEVVGAPSSPV----VNVYPLANYTFGTKE-------AKMEKDTSVADRLARMKVNYMKE 303 +E APS V +YPL Y FG ++ A +E + ADR R+K N+ Sbjct: 8 DEAAAAPSPAAAAARVEIYPLCRYYFGARDVAAGGAGAGLE---TAADRALRLKANFAAH 64 Query: 304 GMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGESEIEGLKRKLCSKLAV--- 474 G+RTSV +LLV+ +HPH+LLLQ+ N+ LPGGRL+PGE +++GLKRKL +KL+V Sbjct: 65 GLRTSVHGVLLVELFDHPHVLLLQVRNSSFLLPGGRLRPGEQDVQGLKRKLSTKLSVAGH 124 Query: 475 ---NSPSFPPNWQVGECVAEWWRPNFETVMYPYCPPHISKPKECKKLFIVHLTEREYFAV 645 WQ+GEC+ WWR F+ +PY P+ PKEC KLF++ L F V Sbjct: 125 QDDEDGDGDDEWQIGECIGMWWRSEFDAAPFPYLLPNARAPKECIKLFLIKLPVSRQFVV 184 Query: 646 PRNLRLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFN 759 PRN++LLAVPL +++DN Q YG +I+ IP LS+F N Sbjct: 185 PRNMKLLAVPLSQIHDNAQVYGSIIAGIPNLLSKFSMN 222
>AK061260:Os08g0398800 | Length = 226 Score = 189 bits (481), Expect = 2e-48 Identities = 96/218 (44%), Positives = 132/218 (60%), Gaps = 17/218 (7%) Frame = +1 Query: 157 EEVVGAPSSPV----VNVYPLANYTFGTKE-------AKMEKDTSVADRLARMKVNYMKE 303 +E APS V +YPL Y FG ++ A +E + ADR R+K N+ Sbjct: 8 DEAAAAPSPAAAAARVEIYPLCRYYFGARDVAAGGAGAGLE---TAADRALRLKANFAAH 64 Query: 304 GMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGESEIEGLKRKLCSKLAV--- 474 G+RTSV +LLV+ +HPH+LLLQ+ N+ LPGGRL+PGE +++GLKRKL +KL+V Sbjct: 65 GLRTSVHGVLLVELFDHPHVLLLQVRNSSFLLPGGRLRPGEQDVQGLKRKLSTKLSVAGH 124 Query: 475 ---NSPSFPPNWQVGECVAEWWRPNFETVMYPYCPPHISKPKECKKLFIVHLTEREYFAV 645 WQ+GEC+ WWR F+ +PY P+ PKEC KLF++ L F V Sbjct: 125 QDDEDGDGDDEWQIGECIGMWWRSEFDAAPFPYLLPNARAPKECIKLFLIKLPVSRQFVV 184 Query: 646 PRNLRLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFN 759 PRN++LLAVPL +++DN Q YG +I+ IP LS+F N Sbjct: 185 PRNMKLLAVPLSQIHDNAQVYGSIIAGIPNLLSKFSMN 222
>AY428025:Os08g0465800 | Length = 505 Score = 30.8 bits (68), Expect = 1.5 Identities = 28/73 (38%), Positives = 31/73 (42%), Gaps = 13/73 (17%) Frame = +3 Query: 177 VLAGGERVPARQLHLR------------HQGGQDGEGHLRRRPPRPHEGQLH-ERRNANK 317 VLA G+R R HLR H GQ RRRPPR H+G L E R A + Sbjct: 360 VLAQGQRQVHRVRHLRAPEEVRLDRAGVHHAGQR---RARRRPPRRHQGGLQPEPRRAAR 416 Query: 318 C*SNPIGARAQPP 356 ARA P Sbjct: 417 LGHRQDPARAGRP 429
>AK107132:Os06g0625900 | Length = 514 Score = 30.4 bits (67), Expect = 2.0 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Frame = +1 Query: 109 TGSGEERGSARPSEAGEEVVG-APSSPVVNVYPLANYTFGTKEAKMEKDTSVADRLARM 282 +GSG RGS+R E++ +PS P V V P F A D V + L + Sbjct: 391 SGSGSGRGSSRGGGGAREIMSPSPSPPPVVVAPRKRVRFVLPAASPRPDAGVREELQEL 449
>AJ427972:Os06g0625900 | Length = 843 Score = 30.4 bits (67), Expect = 2.0 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Frame = +1 Query: 109 TGSGEERGSARPSEAGEEVVG-APSSPVVNVYPLANYTFGTKEAKMEKDTSVADRLARM 282 +GSG RGS+R E++ +PS P V V P F A D V + L + Sbjct: 720 SGSGSGRGSSRGGGGAREIMSPSPSPPPVVVAPRKRVRFVLPAASPRPDAGVREELQEL 778
>AK122178:Os06g0106800 | Length = 499 Score = 30.0 bits (66), Expect = 2.6 Identities = 21/51 (41%), Positives = 22/51 (43%), Gaps = 9/51 (17%) Frame = +3 Query: 180 LAGGERVPARQLHLRHQGGQDG-----EGHLRRRP----PRPHEGQLHERR 305 LAG E P Q R GG D H R +P PRPH G LH R Sbjct: 197 LAGVEHPPGVQQQHRGAGGDDPGTDALAQHRRHQPGLVLPRPHRGLLHRVR 247
>AK105911:Os06g0106800 | Length = 499 Score = 30.0 bits (66), Expect = 2.6 Identities = 21/51 (41%), Positives = 22/51 (43%), Gaps = 9/51 (17%) Frame = +3 Query: 180 LAGGERVPARQLHLRHQGGQDG-----EGHLRRRP----PRPHEGQLHERR 305 LAG E P Q R GG D H R +P PRPH G LH R Sbjct: 197 LAGVEHPPGVQQQHRGAGGDDPGTDALAQHRRHQPGLVLPRPHRGLLHRVR 247
>AK105782:Os06g0106800 | Length = 499 Score = 30.0 bits (66), Expect = 2.6 Identities = 21/51 (41%), Positives = 22/51 (43%), Gaps = 9/51 (17%) Frame = +3 Query: 180 LAGGERVPARQLHLRHQGGQDG-----EGHLRRRP----PRPHEGQLHERR 305 LAG E P Q R GG D H R +P PRPH G LH R Sbjct: 197 LAGVEHPPGVQQQHRGAGGDDPGTDALAQHRRHQPGLVLPRPHRGLLHRVR 247
>AK105650:Os06g0106800 | Length = 499 Score = 30.0 bits (66), Expect = 2.6 Identities = 21/51 (41%), Positives = 22/51 (43%), Gaps = 9/51 (17%) Frame = +3 Query: 180 LAGGERVPARQLHLRHQGGQDG-----EGHLRRRP----PRPHEGQLHERR 305 LAG E P Q R GG D H R +P PRPH G LH R Sbjct: 197 LAGVEHPPGVQQQHRGAGGDDPGTDALAQHRRHQPGLVLPRPHRGLLHRVR 247
>AK073364:Os06g0106800 | Length = 499 Score = 30.0 bits (66), Expect = 2.6 Identities = 21/51 (41%), Positives = 22/51 (43%), Gaps = 9/51 (17%) Frame = +3 Query: 180 LAGGERVPARQLHLRHQGGQDG-----EGHLRRRP----PRPHEGQLHERR 305 LAG E P Q R GG D H R +P PRPH G LH R Sbjct: 197 LAGVEHPPGVQQQHRGAGGDDPGTDALAQHRRHQPGLVLPRPHRGLLHRVR 247
>Os08g0419800:Os08g0419800 | Length = 725 Score = 29.3 bits (64), Expect = 4.4 Identities = 14/25 (56%), Positives = 14/25 (56%) Frame = +3 Query: 231 GGQDGEGHLRRRPPRPHEGQLHERR 305 G Q G G L RR PRP G ERR Sbjct: 81 GRQCGHGRLARRGPRPRRGLPRERR 105
>AK105935:Os08g0562100 | Length = 433 Score = 28.9 bits (63), Expect = 5.8 Identities = 22/68 (32%), Positives = 34/68 (50%) Frame = +1 Query: 223 GTKEAKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLP 402 G + ++ KD ++ D ++ E ++ S EA LL ++ H L GN FC LP Sbjct: 376 GDGDYELVKDVAMDD--------FLWERIKKS-EAELLAEKRCVAH--LTGEGNAFCDLP 424 Query: 403 GGRLKPGE 426 G + PGE Sbjct: 425 GDTMLPGE 432
>AK102598:Os08g0562100 | Length = 433 Score = 28.9 bits (63), Expect = 5.8 Identities = 22/68 (32%), Positives = 34/68 (50%) Frame = +1 Query: 223 GTKEAKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLP 402 G + ++ KD ++ D ++ E ++ S EA LL ++ H L GN FC LP Sbjct: 376 GDGDYELVKDVAMDD--------FLWERIKKS-EAELLAEKRCVAH--LTGEGNAFCDLP 424 Query: 403 GGRLKPGE 426 G + PGE Sbjct: 425 GDTMLPGE 432
>AK071494:Os08g0562100 | Length = 433 Score = 28.9 bits (63), Expect = 5.8 Identities = 22/68 (32%), Positives = 34/68 (50%) Frame = +1 Query: 223 GTKEAKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLP 402 G + ++ KD ++ D ++ E ++ S EA LL ++ H L GN FC LP Sbjct: 376 GDGDYELVKDVAMDD--------FLWERIKKS-EAELLAEKRCVAH--LTGEGNAFCDLP 424 Query: 403 GGRLKPGE 426 G + PGE Sbjct: 425 GDTMLPGE 432
>AK067298:Os05g0397700 | Length = 542 Score = 28.1 bits (61), Expect = 9.9 Identities = 18/47 (38%), Positives = 20/47 (42%) Frame = +3 Query: 213 LHLRHQGGQDGEGHLRRRPPRPHEGQLHERRNANKC*SNPIGARAQP 353 L L H GG G RR+ P P +LH R S P A A P Sbjct: 31 LRLHHDGGHLLVGTTRRQAPSPRRRRLHAARA-----SAPSAAAASP 72
>AK069639:Os08g0230200 | Length = 482 Score = 28.1 bits (61), Expect = 9.9 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +1 Query: 244 EKDTSVADRLARMKVNYMKEGMRTSVEAIL 333 E++ S DR+ R+K Y+KEG SV ++ Sbjct: 404 ERNLSSDDRIMRLKEGYIKEGSTVSVMGVV 433
>AK068251:Os04g0606500 | Length = 482 Score = 28.1 bits (61), Expect = 9.9 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +1 Query: 244 EKDTSVADRLARMKVNYMKEGMRTSVEAIL 333 E++ S DR+ R+K Y+KEG SV ++ Sbjct: 404 ERNLSSDDRIMRLKEGYIKEGSTVSVMGVV 433
>AK060252:Os08g0230200 | Length = 482 Score = 28.1 bits (61), Expect = 9.9 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +1 Query: 244 EKDTSVADRLARMKVNYMKEGMRTSVEAIL 333 E++ S DR+ R+K Y+KEG SV ++ Sbjct: 404 ERNLSSDDRIMRLKEGYIKEGSTVSVMGVV 433 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 27,674,659 Number of extensions: 654872 Number of successful extensions: 1992 Number of sequences better than 10.0: 22 Number of HSP's gapped: 1988 Number of HSP's successfully gapped: 22 Length of query: 328 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 227 Effective length of database: 11,355,714 Effective search space: 2577747078 Effective search space used: 2577747078 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
