ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf38l08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ785784.1| Cintractia sorghi-vulgaris isolate AFTOL-ID 867 R... 50 0.057
2gb|AC090530.3| Homo sapiens chromosome 1 clone RP11-416G1, compl... 50 0.057
3emb|AL359205.15| Human DNA sequence from clone RP11-345N16 on ch... 50 0.057
4gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 48 0.22
5gb|DQ055925.1| Coprinellus disseminatus strain TJ-00-99.3 putati... 48 0.22
6gb|DQ055918.1| Coprinellus disseminatus strain TJ-01-11.2 putati... 48 0.22
7ref|XM_001208531.1| Aspergillus terreus NIH2624 conserved hypoth... 46 0.88
8gb|DQ055921.1| Coprinellus disseminatus strain TJ-00-38.5 putati... 46 0.88
9gb|DQ055917.1| Coprinellus disseminatus strain TJ-01-11.2 putati... 46 0.88
10gb|DQ055916.1| Coprinellus disseminatus strain TJ-01-06.5 putati... 46 0.88
11gb|AE010451.1| Methanopyrus kandleri AV19 section 150 of 157 of ... 46 0.88
12dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 46 0.88
13gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 46 0.88
14emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 46 0.88
15gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete ge... 44 3.5
16ref|XM_418542.2| PREDICTED: Gallus gallus myeloid/lymphoid or mi... 44 3.5
17emb|CR855230.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 44 3.5
18emb|CR855136.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 44 3.5
19gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete s... 44 3.5
20gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete s... 44 3.5
21gb|DQ055923.1| Coprinellus disseminatus strain TJ-00-94.4 putati... 44 3.5
22ref|NM_167910.2| Drosophila melanogaster CG7971-RB, transcript v... 44 3.5
23ref|NM_167909.2| Drosophila melanogaster CG7971-RC, transcript v... 44 3.5
24ref|NM_141633.1| Drosophila melanogaster CG8135-RA (CG8135), mRNA 44 3.5
25ref|NM_139385.3| Drosophila melanogaster CG7971-RA, transcript v... 44 3.5
26ref|NM_001031932.1| Drosophila melanogaster CG7971-RD, transcrip... 44 3.5
27gb|AY052127.1| Drosophila melanogaster SD07741 full insert cDNA 44 3.5
28gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 44 3.5
29ref|XM_756623.1| Ustilago maydis 521 hypothetical protein (UM055... 44 3.5
30gb|AC010038.5| Drosophila melanogaster 3L BAC RP98-14O14 (Roswel... 44 3.5
31gb|AY119474.1| Drosophila melanogaster GH05505 full insert cDNA 44 3.5
32gb|AC093192.2| Drosophila melanogaster 3L BAC RP98-48J18 (Roswel... 44 3.5
33gb|AC105264.3| Drosophila melanogaster 3L BAC RP98-17K18 (Roswel... 44 3.5
34dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 3.5
35dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 3.5
36ref|XM_687709.1| PREDICTED: Danio rerio similar to CG15134-PA (L... 44 3.5
37emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete ... 44 3.5
38emb|BX640431.1| Bordetella parapertussis strain 12822, complete ... 44 3.5
39emb|BX640416.1| Bordetella pertussis strain Tohama I, complete g... 44 3.5
40emb|AL606446.1|OSJN00016 Oryza sativa genomic DNA, chromosome 4,... 44 3.5
41ref|NM_001012908.1| Gallus gallus ribosomal RNA processing 12 ho... 44 3.5
42emb|CR382339.9| Zebrafish DNA sequence from clone CH211-129E5 in... 44 3.5
43gb|AC010581.3|AC010581 Drosophila melanogaster, chromosome 3R, r... 44 3.5
44gb|AC007339.8| Homo sapiens chromosome 16 clone RP11-305A7, comp... 44 3.5
45emb|CR555301.4| Zebrafish DNA sequence from clone CH211-129A13 i... 44 3.5
46gb|BT003620.1| Drosophila melanogaster GH04236 full insert cDNA 44 3.5
47dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic D... 44 3.5
48dbj|AK109971.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 3.5
49emb|CR353905.1| Gallus gallus finished cDNA, clone ChEST360e19 44 3.5
50gb|AE015924.1| Porphyromonas gingivalis W83, complete genome 44 3.5
51gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 44 3.5
52gb|AF153767.1|AF153767 Porphyromonas gingivalis strain W50 immun... 44 3.5
53gb|AC005557.1|AC005557 Drosophila melanogaster, chromosome 3L, r... 44 3.5
54emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4,... 44 3.5
55emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4,... 44 3.5
56emb|CT009609.1| Desulfococcus multivorans vrl island 44 3.5 
>gb|DQ785784.1| Cintractia sorghi-vulgaris isolate AFTOL-ID 867 RNA polymerase II
            largest subunit (rpb1) gene, partial cds
          Length = 695
 Score = 50.1 bits (25), Expect = 0.057
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 2942 gcgagggcgacgacggcgacgagaacgcc 2970
            |||||| ||||||||||||||||||||||
Sbjct: 350  gcgaggacgacgacggcgacgagaacgcc 378
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>gb|AC090530.3| Homo sapiens chromosome 1 clone RP11-416G1, complete sequence
          Length = 200562

 Score = 50.1 bits (25), Expect = 0.057
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 3538   caaaagcgtaagggcacttgaggta 3562
              |||||||||||||||||||||||||
Sbjct: 125033 caaaagcgtaagggcacttgaggta 125057
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>emb|AL359205.15| Human DNA sequence from clone RP11-345N16 on chromosome 1 Contains a
             novel gene and the 3' end of a variant of novel gene
             (MGC22773), complete sequence
          Length = 169434

 Score = 50.1 bits (25), Expect = 0.057
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 3538  caaaagcgtaagggcacttgaggta 3562
             |||||||||||||||||||||||||
Sbjct: 20796 caaaagcgtaagggcacttgaggta 20820
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 48.1 bits (24), Expect = 0.22
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 2173    gtcgagcagttcaagatgctgctg 2196
               ||||||||||||||||||||||||
Sbjct: 4444764 gtcgagcagttcaagatgctgctg 4444741
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>gb|DQ055925.1| Coprinellus disseminatus strain TJ-00-99.3 putative pheromone
            receptor (STE3.2) gene, partial cds
          Length = 475

 Score = 48.1 bits (24), Expect = 0.22
 Identities = 31/32 (96%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                            
Query: 3185 gcgatgaggaggtcgacgatgaccggcgcggc 3216
            |||||||||||||||||||||| |||||||||
Sbjct: 241  gcgatgaggaggtcgacgatga-cggcgcggc 211
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>gb|DQ055918.1| Coprinellus disseminatus strain TJ-01-11.2 putative pheromone
            receptor (STE3.2) gene, STE3.2-2 allele, partial cds
          Length = 475

 Score = 48.1 bits (24), Expect = 0.22
 Identities = 31/32 (96%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                            
Query: 3185 gcgatgaggaggtcgacgatgaccggcgcggc 3216
            |||||||||||||||||||||| |||||||||
Sbjct: 241  gcgatgaggaggtcgacgatga-cggcgcggc 211
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>ref|XM_001208531.1| Aspergillus terreus NIH2624 conserved hypothetical protein
            (ATEG_01166) mRNA, complete cds
          Length = 1578

 Score = 46.1 bits (23), Expect = 0.88
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 2181 gttcaagatgctgctggtcagca 2203
            |||||||||||||||||||||||
Sbjct: 457  gttcaagatgctgctggtcagca 479
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>gb|DQ055921.1| Coprinellus disseminatus strain TJ-00-38.5 putative pheromone
            receptor (STE3.2) pseudogene, partial sequence
          Length = 475

 Score = 46.1 bits (23), Expect = 0.88
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 3185 gcgatgaggaggtcgacgatgac 3207
            |||||||||||||||||||||||
Sbjct: 241  gcgatgaggaggtcgacgatgac 219
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>gb|DQ055917.1| Coprinellus disseminatus strain TJ-01-11.2 putative pheromone
            receptor (STE3.2) pseudogene, STE3.2-1 allele, partial
            sequence
          Length = 475

 Score = 46.1 bits (23), Expect = 0.88
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 3185 gcgatgaggaggtcgacgatgac 3207
            |||||||||||||||||||||||
Sbjct: 241  gcgatgaggaggtcgacgatgac 219
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>gb|DQ055916.1| Coprinellus disseminatus strain TJ-01-06.5 putative pheromone
            receptor (STE3.2) pseudogene, partial sequence
          Length = 453

 Score = 46.1 bits (23), Expect = 0.88
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 3185 gcgatgaggaggtcgacgatgac 3207
            |||||||||||||||||||||||
Sbjct: 219  gcgatgaggaggtcgacgatgac 197
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>gb|AE010451.1| Methanopyrus kandleri AV19 section 150 of 157 of the complete genome
          Length = 10685

 Score = 46.1 bits (23), Expect = 0.88
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1194 caagaagctccacgagctcctcg 1216
            |||||||||||||||||||||||
Sbjct: 1211 caagaagctccacgagctcctcg 1233
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 46.1 bits (23), Expect = 0.88
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 1832    accgcccctcggtgatcaaggcc 1854
               |||||||||||||||||||||||
Sbjct: 3022825 accgcccctcggtgatcaaggcc 3022847
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 46.1 bits (23), Expect = 0.88
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 1832    accgcccctcggtgatcaaggcc 1854
               |||||||||||||||||||||||
Sbjct: 3030022 accgcccctcggtgatcaaggcc 3030044
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 46.1 bits (23), Expect = 0.88
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 2946    gggcgacgacggcgacgagaacgccga 2972
               |||||||||||||| ||||||||||||
Sbjct: 1014983 gggcgacgacggcggcgagaacgccga 1015009
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>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome
          Length = 6988209

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 1701    cgccgacggccgcaccgagcag 1722
               ||||||||||||||||||||||
Sbjct: 2512463 cgccgacggccgcaccgagcag 2512484
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>ref|XM_418542.2| PREDICTED: Gallus gallus myeloid/lymphoid or mixed-lineage leukemia 3
            (MLL3), mRNA
          Length = 16789

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1373 gtctgtggctgctgccgctgct 1394
            ||||||||||||||||||||||
Sbjct: 111  gtctgtggctgctgccgctgct 90
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>emb|CR855230.1| Oryza sativa genomic DNA, chromosome 4, BAC clone:
              OSIGBa0115K01-H0319F09, complete sequence
          Length = 189580

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 2942   gcgagggcgacgacggcgacga 2963
              ||||||||||||||||||||||
Sbjct: 150330 gcgagggcgacgacggcgacga 150351
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>emb|CR855136.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0147J19,
              complete sequence
          Length = 123992

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 2949   cgacgacggcgacgagaacgccgaggagat 2978
              |||||||||||||||| ||| |||||||||
Sbjct: 109319 cgacgacggcgacgagtacgtcgaggagat 109290
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>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence
          Length = 24543557

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 2846    agcgcaagcagaagaagaagtcgaag 2871
               |||||||| |||||||||||||||||
Sbjct: 1661151 agcgcaagaagaagaagaagtcgaag 1661126
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>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence
          Length = 27905053

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 2842    aagaagcgcaagcagaagaagaagtc 2867
               ||||||||| ||||||||||||||||
Sbjct: 5230449 aagaagcgccagcagaagaagaagtc 5230474
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>gb|DQ055923.1| Coprinellus disseminatus strain TJ-00-94.4 putative pheromone
            receptor (STE3.2) gene, partial cds
          Length = 475

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 3186 cgatgaggaggtcgacgatgac 3207
            ||||||||||||||||||||||
Sbjct: 240  cgatgaggaggtcgacgatgac 219
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>ref|NM_167910.2| Drosophila melanogaster CG7971-RB, transcript variant B (CG7971),
            mRNA
          Length = 1181

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2846 agcgcaagcagaagaagaagtcgaag 2871
            |||||||| |||||||||||||||||
Sbjct: 620  agcgcaagaagaagaagaagtcgaag 645
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>ref|NM_167909.2| Drosophila melanogaster CG7971-RC, transcript variant C (CG7971),
            mRNA
          Length = 3859

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2846 agcgcaagcagaagaagaagtcgaag 2871
            |||||||| |||||||||||||||||
Sbjct: 939  agcgcaagaagaagaagaagtcgaag 964
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>ref|NM_141633.1| Drosophila melanogaster CG8135-RA (CG8135), mRNA
          Length = 2777

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2842 aagaagcgcaagcagaagaagaagtc 2867
            ||||||||| ||||||||||||||||
Sbjct: 353  aagaagcgccagcagaagaagaagtc 378
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>ref|NM_139385.3| Drosophila melanogaster CG7971-RA, transcript variant A (CG7971),
            mRNA
          Length = 3648

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2846 agcgcaagcagaagaagaagtcgaag 2871
            |||||||| |||||||||||||||||
Sbjct: 939  agcgcaagaagaagaagaagtcgaag 964
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>ref|NM_001031932.1| Drosophila melanogaster CG7971-RD, transcript variant D (CG7971),
            mRNA
          Length = 2883

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2846 agcgcaagcagaagaagaagtcgaag 2871
            |||||||| |||||||||||||||||
Sbjct: 939  agcgcaagaagaagaagaagtcgaag 964
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>gb|AY052127.1| Drosophila melanogaster SD07741 full insert cDNA
          Length = 3682

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2846 agcgcaagcagaagaagaagtcgaag 2871
            |||||||| |||||||||||||||||
Sbjct: 921  agcgcaagaagaagaagaagtcgaag 946
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 2393    accgcttcgcgttccacggcct 2414
               ||||||||||||||||||||||
Sbjct: 7052766 accgcttcgcgttccacggcct 7052787
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>ref|XM_756623.1| Ustilago maydis 521 hypothetical protein (UM05569.1) partial mRNA
          Length = 513

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 1037 cgctgatcgagtcgacggcggccatgctgc 1066
            ||||||||| | ||||||||||||||||||
Sbjct: 204  cgctgatcgtggcgacggcggccatgctgc 233
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>gb|AC010038.5| Drosophila melanogaster 3L BAC RP98-14O14 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 172175

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 2846  agcgcaagcagaagaagaagtcgaag 2871
             |||||||| |||||||||||||||||
Sbjct: 59688 agcgcaagaagaagaagaagtcgaag 59713
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>gb|AY119474.1| Drosophila melanogaster GH05505 full insert cDNA
          Length = 2839

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2842 aagaagcgcaagcagaagaagaagtc 2867
            ||||||||| ||||||||||||||||
Sbjct: 352  aagaagcgccagcagaagaagaagtc 377
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>gb|AC093192.2| Drosophila melanogaster 3L BAC RP98-48J18 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 166862

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 2846   agcgcaagcagaagaagaagtcgaag 2871
              |||||||| |||||||||||||||||
Sbjct: 135066 agcgcaagaagaagaagaagtcgaag 135041
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>gb|AC105264.3| Drosophila melanogaster 3L BAC RP98-17K18 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 177583

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 2846  agcgcaagcagaagaagaagtcgaag 2871
             |||||||| |||||||||||||||||
Sbjct: 49325 agcgcaagaagaagaagaagtcgaag 49300
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 1969     acccccaagaaggccgaaatgc 1990
                ||||||||||||||||||||||
Sbjct: 12922988 acccccaagaaggccgaaatgc 12923009
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 2942     gcgagggcgacgacggcgacga 2963
                ||||||||||||||||||||||
Sbjct: 26413596 gcgagggcgacgacggcgacga 26413617



 Score = 44.1 bits (22), Expect = 3.5
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 2949     cgacgacggcgacgagaacgccgaggagat 2978
                |||||||||||||||| ||| |||||||||
Sbjct: 33471165 cgacgacggcgacgagtacgtcgaggagat 33471136
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>ref|XM_687709.1| PREDICTED: Danio rerio similar to CG15134-PA (LOC564367), mRNA
          Length = 4818

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 324  tggagaagaaccaggacaatgc 345
            ||||||||||||||||||||||
Sbjct: 4355 tggagaagaaccaggacaatgc 4376
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>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16
          Length = 348642

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 2748   actcgagcgcctcatgcgcaag 2769
              ||||||||||||||||||||||
Sbjct: 277633 actcgagcgcctcatgcgcaag 277612
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>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14
          Length = 347894

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 2748   actcgagcgcctcatgcgcaag 2769
              ||||||||||||||||||||||
Sbjct: 293610 actcgagcgcctcatgcgcaag 293589
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>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12
          Length = 349354

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 2748   actcgagcgcctcatgcgcaag 2769
              ||||||||||||||||||||||
Sbjct: 189872 actcgagcgcctcatgcgcaag 189893
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>emb|AL606446.1|OSJN00016 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F16,
              complete sequence
          Length = 119535

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 2949   cgacgacggcgacgagaacgccgaggagat 2978
              |||||||||||||||| ||| |||||||||
Sbjct: 117044 cgacgacggcgacgagtacgtcgaggagat 117015
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>ref|NM_001012908.1| Gallus gallus ribosomal RNA processing 12 homolog (S. cerevisiae)
            (RRP12), mRNA
 emb|AJ720149.1| Gallus gallus mRNA for hypothetical protein, clone 11j1
          Length = 4156

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 1419 gctcggcttcttcacctcctacttcctgcc 1448
            ||||||||||||||||  ||||||||||||
Sbjct: 1766 gctcggcttcttcaccagctacttcctgcc 1795
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>emb|CR382339.9| Zebrafish DNA sequence from clone CH211-129E5 in linkage group 13,
             complete sequence
          Length = 169923

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 324   tggagaagaaccaggacaatgc 345
             ||||||||||||||||||||||
Sbjct: 53287 tggagaagaaccaggacaatgc 53266
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>gb|AC010581.3|AC010581 Drosophila melanogaster, chromosome 3R, region 85D-85D, BAC clone
             BACR19J06, complete sequence
          Length = 175053

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 2842  aagaagcgcaagcagaagaagaagtc 2867
             ||||||||| ||||||||||||||||
Sbjct: 40382 aagaagcgccagcagaagaagaagtc 40407
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>gb|AC007339.8| Homo sapiens chromosome 16 clone RP11-305A7, complete sequence
          Length = 183646

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 2276   gcaagaaggagctgccaaagtt 2297
              ||||||||||||||||||||||
Sbjct: 117937 gcaagaaggagctgccaaagtt 117916
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>emb|CR555301.4| Zebrafish DNA sequence from clone CH211-129A13 in linkage group 13,
             complete sequence
          Length = 168518

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 324   tggagaagaaccaggacaatgc 345
             ||||||||||||||||||||||
Sbjct: 35884 tggagaagaaccaggacaatgc 35863
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>gb|BT003620.1| Drosophila melanogaster GH04236 full insert cDNA
          Length = 1209

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2846 agcgcaagcagaagaagaagtcgaag 2871
            |||||||| |||||||||||||||||
Sbjct: 623  agcgcaagaagaagaagaagtcgaag 648
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>dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0505H05
          Length = 152845

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1969  acccccaagaaggccgaaatgc 1990
             ||||||||||||||||||||||
Sbjct: 84972 acccccaagaaggccgaaatgc 84993
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>dbj|AK109971.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-C06, full
            insert sequence
          Length = 4856

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 3186 cgatgaggaggtcgacgatgac 3207
            ||||||||||||||||||||||
Sbjct: 1248 cgatgaggaggtcgacgatgac 1269
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>emb|CR353905.1| Gallus gallus finished cDNA, clone ChEST360e19
          Length = 842

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 1419 gctcggcttcttcacctcctacttcctgcc 1448
            ||||||||||||||||  ||||||||||||
Sbjct: 527  gctcggcttcttcaccagctacttcctgcc 556
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>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome
          Length = 2343476

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 3022   gaggacaacgatgagcctatcg 3043
              ||||||||||||||||||||||
Sbjct: 233835 gaggacaacgatgagcctatcg 233856
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 2582    agttcaaggcgcgcgaggtcgtcaag 2607
               ||||||||||||||||||||| ||||
Sbjct: 1230771 agttcaaggcgcgcgaggtcgacaag 1230746
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>gb|AF153767.1|AF153767 Porphyromonas gingivalis strain W50 immunoreactive 106 kDa antigen
            PG115 gene, complete cds
          Length = 2826

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 3022 gaggacaacgatgagcctatcg 3043
            ||||||||||||||||||||||
Sbjct: 793  gaggacaacgatgagcctatcg 814
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>gb|AC005557.1|AC005557 Drosophila melanogaster, chromosome 3L, region 62A10-62B5, P1 clones
             DS02777, DS03222, DS02345, and DS04808, complete sequence
          Length = 257867

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 2846  agcgcaagcagaagaagaagtcgaag 2871
             |||||||| |||||||||||||||||
Sbjct: 49619 agcgcaagaagaagaagaagtcgaag 49594
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>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08,
             complete sequence
          Length = 171551

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2942  gcgagggcgacgacggcgacga 2963
             ||||||||||||||||||||||
Sbjct: 54229 gcgagggcgacgacggcgacga 54250
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>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13,
             complete sequence
          Length = 152264

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 2949  cgacgacggcgacgagaacgccgaggagat 2978
             |||||||||||||||| ||| |||||||||
Sbjct: 47354 cgacgacggcgacgagtacgtcgaggagat 47325
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>emb|CT009609.1| Desulfococcus multivorans vrl island
          Length = 89210

 Score = 44.1 bits (22), Expect = 3.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1381  ctgctgccgctgctcaaggcgc 1402
             ||||||||||||||||||||||
Sbjct: 74340 ctgctgccgctgctcaaggcgc 74361


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 474,892,676
Number of extensions: 25484432
Number of successful extensions: 148576
Number of sequences better than 10.0: 56
Number of HSP's gapped: 148576
Number of HSP's successfully gapped: 57
Length of query: 3593
Length of database: 18,610,659,111
Length adjustment: 24
Effective length of query: 3569
Effective length of database: 18,499,340,271
Effective search space: 66024145427199
Effective search space used: 66024145427199
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
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