| Clone Name | FLbaf32j18 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT828426.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN010K01, full insert sequence Length = 1346 Score = 726 bits (366), Expect = 0.0 Identities = 612/694 (88%) Strand = Plus / Plus Query: 239 ctcgaggagttggacaccagcaacatgcttctccgccagcggatcatctttctcggctcc 298 ||||||||| ||||||||| ||||||||| || |||||||| ||| |||| ||||||||| Sbjct: 282 ctcgaggagctggacaccaccaacatgctccttcgccagcgcatcgtcttcctcggctcc 341 Query: 299 ccggtggatgatttgaatgcggatcttatcaccagtcaactgttactattggatgcaaag 358 |||||||||||| ||| ||| |||||||||| ||| ||||| || || ||||||| || Sbjct: 342 ccggtggatgatatgagtgctgatcttatcatcagccaactcttgctgctggatgctgag 401 Query: 359 gaccacacaaaggacatcaagttgtttattaattcacccggaggctccatcactgcagga 418 || | || ||||||||||| ||||||||||| ||||| ||||||||||| || |||||| Sbjct: 402 gataaaactaaggacatcaaattgtttattaactcacctggaggctccataacagcagga 461 Query: 419 atggggatttatgatgccatgaaattttgcaaggctgatatctcaaccgtttgctttgga 478 ||||| |||||||||||||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 462 atgggagtttatgatgccatgaaattttgcaaggctgatatatcaactgtctgctttgga 521 Query: 479 ttggcggcttccatgggtgcatttttgttagctgctgggacaaagggaaagagattttgc 538 |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 522 ctggcggcttccatgggtgcatttttgctagctgctgggacaaaggggaagagattttgc 581 Query: 539 atgccaaatgcgagaattatgatccatcagccatcagggggagctggtgggaaggccaca 598 ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| |||| Sbjct: 582 atgcctaatgcgagaattatgatccatcaaccatcagggggtgctggtgggaaggtcaca 641 Query: 599 gagatgggattgcagataacagaaatgctctatgagaagataaagatcaacaagataatg 658 ||||||||||| |||||| ||| ||| | ||||||||||||||||||||||| ||| || Sbjct: 642 gagatgggattacagatacgagagatgatgtatgagaagataaagatcaacaaaatactg 701 Query: 659 tcaaggatcactggaaagcctgaagagcagattgatgaggacacgaggttcgactctttc 718 ||||| ||||| || |||||||||||||||||||||||||| || | ||| |||| |||| Sbjct: 702 tcaagaatcaccgggaagcctgaagagcagattgatgaggatacaaagtttgactatttc 761 Query: 719 atgagtccttgggaggccaaggattatggaataattgacagcattatagacgagggaaaa 778 |||||||||||||| |||||||||||||| ||| |||||||| ||||||| || || || Sbjct: 762 atgagtccttgggaagccaaggattatggcatagttgacagcgttatagatgaagggaag 821 Query: 779 cttggattggtagctcctgtatcgggagctgtgccacccccaaaatcacgtatgtggtac 838 | || ||||| |||||| | | |||||||||||||| |||||||| ||| |||||||| Sbjct: 822 ccggggttggttgctcctttggcaggagctgtgccacctccaaaatcgcgtgtgtggtac 881 Query: 839 ttgtggaacgcttcaggaccaactagaaaaataatgaaaaatctaccttcagaggaaaag 898 || ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 882 ttatggaatgcttcaggaccaactagaaaaatcatgaaaaatctaccttcagaggagaag 941 Query: 899 ctcattcgaaatggtaatggcagcgtaagtggag 932 || |||| ||||||||||||||| | |||||||| Sbjct: 942 cttattcaaaatggtaatggcagtgcaagtggag 975
>ref|NM_001049690.1| Oryza sativa (japonica cultivar-group) Os01g0507900 (Os01g0507900) mRNA, complete cds Length = 1256 Score = 726 bits (366), Expect = 0.0 Identities = 612/694 (88%) Strand = Plus / Plus Query: 239 ctcgaggagttggacaccagcaacatgcttctccgccagcggatcatctttctcggctcc 298 ||||||||| ||||||||| ||||||||| || |||||||| ||| |||| ||||||||| Sbjct: 293 ctcgaggagctggacaccaccaacatgctccttcgccagcgcatcgtcttcctcggctcc 352 Query: 299 ccggtggatgatttgaatgcggatcttatcaccagtcaactgttactattggatgcaaag 358 |||||||||||| ||| ||| |||||||||| ||| ||||| || || ||||||| || Sbjct: 353 ccggtggatgatatgagtgctgatcttatcatcagccaactcttgctgctggatgctgag 412 Query: 359 gaccacacaaaggacatcaagttgtttattaattcacccggaggctccatcactgcagga 418 || | || ||||||||||| ||||||||||| ||||| ||||||||||| || |||||| Sbjct: 413 gataaaactaaggacatcaaattgtttattaactcacctggaggctccataacagcagga 472 Query: 419 atggggatttatgatgccatgaaattttgcaaggctgatatctcaaccgtttgctttgga 478 ||||| |||||||||||||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 473 atgggagtttatgatgccatgaaattttgcaaggctgatatatcaactgtctgctttgga 532 Query: 479 ttggcggcttccatgggtgcatttttgttagctgctgggacaaagggaaagagattttgc 538 |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 533 ctggcggcttccatgggtgcatttttgctagctgctgggacaaaggggaagagattttgc 592 Query: 539 atgccaaatgcgagaattatgatccatcagccatcagggggagctggtgggaaggccaca 598 ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| |||| Sbjct: 593 atgcctaatgcgagaattatgatccatcaaccatcagggggtgctggtgggaaggtcaca 652 Query: 599 gagatgggattgcagataacagaaatgctctatgagaagataaagatcaacaagataatg 658 ||||||||||| |||||| ||| ||| | ||||||||||||||||||||||| ||| || Sbjct: 653 gagatgggattacagatacgagagatgatgtatgagaagataaagatcaacaaaatactg 712 Query: 659 tcaaggatcactggaaagcctgaagagcagattgatgaggacacgaggttcgactctttc 718 ||||| ||||| || |||||||||||||||||||||||||| || | ||| |||| |||| Sbjct: 713 tcaagaatcaccgggaagcctgaagagcagattgatgaggatacaaagtttgactatttc 772 Query: 719 atgagtccttgggaggccaaggattatggaataattgacagcattatagacgagggaaaa 778 |||||||||||||| |||||||||||||| ||| |||||||| ||||||| || || || Sbjct: 773 atgagtccttgggaagccaaggattatggcatagttgacagcgttatagatgaagggaag 832 Query: 779 cttggattggtagctcctgtatcgggagctgtgccacccccaaaatcacgtatgtggtac 838 | || ||||| |||||| | | |||||||||||||| |||||||| ||| |||||||| Sbjct: 833 ccggggttggttgctcctttggcaggagctgtgccacctccaaaatcgcgtgtgtggtac 892 Query: 839 ttgtggaacgcttcaggaccaactagaaaaataatgaaaaatctaccttcagaggaaaag 898 || ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 893 ttatggaatgcttcaggaccaactagaaaaatcatgaaaaatctaccttcagaggagaag 952 Query: 899 ctcattcgaaatggtaatggcagcgtaagtggag 932 || |||| ||||||||||||||| | |||||||| Sbjct: 953 cttattcaaaatggtaatggcagtgcaagtggag 986
>dbj|AK102473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094H09, full insert sequence Length = 1257 Score = 726 bits (366), Expect = 0.0 Identities = 612/694 (88%) Strand = Plus / Plus Query: 239 ctcgaggagttggacaccagcaacatgcttctccgccagcggatcatctttctcggctcc 298 ||||||||| ||||||||| ||||||||| || |||||||| ||| |||| ||||||||| Sbjct: 294 ctcgaggagctggacaccaccaacatgctccttcgccagcgcatcgtcttcctcggctcc 353 Query: 299 ccggtggatgatttgaatgcggatcttatcaccagtcaactgttactattggatgcaaag 358 |||||||||||| ||| ||| |||||||||| ||| ||||| || || ||||||| || Sbjct: 354 ccggtggatgatatgagtgctgatcttatcatcagccaactcttgctgctggatgctgag 413 Query: 359 gaccacacaaaggacatcaagttgtttattaattcacccggaggctccatcactgcagga 418 || | || ||||||||||| ||||||||||| ||||| ||||||||||| || |||||| Sbjct: 414 gataaaactaaggacatcaaattgtttattaactcacctggaggctccataacagcagga 473 Query: 419 atggggatttatgatgccatgaaattttgcaaggctgatatctcaaccgtttgctttgga 478 ||||| |||||||||||||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 474 atgggagtttatgatgccatgaaattttgcaaggctgatatatcaactgtctgctttgga 533 Query: 479 ttggcggcttccatgggtgcatttttgttagctgctgggacaaagggaaagagattttgc 538 |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 534 ctggcggcttccatgggtgcatttttgctagctgctgggacaaaggggaagagattttgc 593 Query: 539 atgccaaatgcgagaattatgatccatcagccatcagggggagctggtgggaaggccaca 598 ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| |||| Sbjct: 594 atgcctaatgcgagaattatgatccatcaaccatcagggggtgctggtgggaaggtcaca 653 Query: 599 gagatgggattgcagataacagaaatgctctatgagaagataaagatcaacaagataatg 658 ||||||||||| |||||| ||| ||| | ||||||||||||||||||||||| ||| || Sbjct: 654 gagatgggattacagatacgagagatgatgtatgagaagataaagatcaacaaaatactg 713 Query: 659 tcaaggatcactggaaagcctgaagagcagattgatgaggacacgaggttcgactctttc 718 ||||| ||||| || |||||||||||||||||||||||||| || | ||| |||| |||| Sbjct: 714 tcaagaatcaccgggaagcctgaagagcagattgatgaggatacaaagtttgactatttc 773 Query: 719 atgagtccttgggaggccaaggattatggaataattgacagcattatagacgagggaaaa 778 |||||||||||||| |||||||||||||| ||| |||||||| ||||||| || || || Sbjct: 774 atgagtccttgggaagccaaggattatggcatagttgacagcgttatagatgaagggaag 833 Query: 779 cttggattggtagctcctgtatcgggagctgtgccacccccaaaatcacgtatgtggtac 838 | || ||||| |||||| | | |||||||||||||| |||||||| ||| |||||||| Sbjct: 834 ccggggttggttgctcctttggcaggagctgtgccacctccaaaatcgcgtgtgtggtac 893 Query: 839 ttgtggaacgcttcaggaccaactagaaaaataatgaaaaatctaccttcagaggaaaag 898 || ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 894 ttatggaatgcttcaggaccaactagaaaaatcatgaaaaatctaccttcagaggagaag 953 Query: 899 ctcattcgaaatggtaatggcagcgtaagtggag 932 || |||| ||||||||||||||| | |||||||| Sbjct: 954 cttattcaaaatggtaatggcagtgcaagtggag 987
>gb|AY109053.1| Zea mays PCO106983 mRNA sequence Length = 704 Score = 355 bits (179), Expect = 3e-94 Identities = 440/527 (83%) Strand = Plus / Minus Query: 428 tatgatgccatgaaattttgcaaggctgatatctcaaccgtttgctttggattggcggct 487 |||||||| |||||||||||||| |||||| | ||||| ||||||||||||||||||||| Sbjct: 702 tatgatgctatgaaattttgcaaagctgatgtgtcaactgtttgctttggattggcggct 643 Query: 488 tccatgggtgcatttttgttagctgctgggacaaagggaaagagattttgcatgccaaat 547 || |||||||||||||| | ||||||||||||||||| ||||| | |||||||||||| Sbjct: 642 tcaatgggtgcatttttacttgctgctgggacaaagggtaagaggtactgcatgccaaat 583 Query: 548 gcgagaattatgatccatcagccatcagggggagctggtgggaaggccacagagatggga 607 ||||| ||||||||||||||||||||||| || ||||| ||||| | ||||||||||||| Sbjct: 582 gcgaggattatgatccatcagccatcaggtggcgctggcgggaaagtcacagagatggga 523 Query: 608 ttgcagataacagaaatgctctatgagaagataaagatcaacaagataatgtcaaggatc 667 | ||||||| ||| ||| | || || ||||| |||||||| || |||||||| || || Sbjct: 522 ctacagataagagagatgatgtacgaaaagattaagatcaataaaataatgtcgagaatt 463 Query: 668 actggaaagcctgaagagcagattgatgaggacacgaggttcgactctttcatgagtcct 727 |||||||| |||| |||||||||||||| ||||||| ||| || | ||||||||||||| Sbjct: 462 actggaaaatctgaggagcagattgatgaagacacgaagtttgattatttcatgagtcct 403 Query: 728 tgggaggccaaggattatggaataattgacagcattatagacgagggaaaacttggattg 787 | ||| |||||||||||||| ||| |||||| || ||||| ||||| |||| || ||| Sbjct: 402 tcggaagccaaggattatgggatagttgacaatatcatagatgaggggaaaccagggttg 343 Query: 788 gtagctcctgtatcgggagctgtgccacccccaaaatcacgtatgtggtacttgtggaac 847 |||||||| | | ||| |||| || || || ||||| ||| |||||||||||||||| Sbjct: 342 gtagctcccttggcaggatctgttccgcctcccaaatcgcgtgtgtggtacttgtggaag 283 Query: 848 gcttcaggaccaactagaaaaataatgaaaaatctaccttcagaggaaaagctcattcga 907 ||||| || || || || || || |||||| |||||||||||||||| || || |||| Sbjct: 282 gcttcggggccgaccaggaagatcatgaaacatctaccttcagaggagaaactaattcac 223 Query: 908 aatggtaatggcagcgtaagtggagctgatggaatgctgaaggaggc 954 |||||||| || || | || ||||| |||||||| ||| |||||||| Sbjct: 222 aatggtaacggaagtgcaactggagatgatggaaagctcaaggaggc 176
>gb|AF450251.1|AF450251 Oryza sativa blast-resistant mRNA, partial sequence Length = 613 Score = 349 bits (176), Expect = 2e-92 Identities = 308/352 (87%) Strand = Plus / Plus Query: 581 gctggtgggaaggccacagagatgggattgcagataacagaaatgctctatgagaagata 640 ||||||||||||| ||||||||||||||| |||||| ||| ||| | |||||||||||| Sbjct: 18 gctggtgggaaggtcacagagatgggattacagatacgagagatgatgtatgagaagata 77 Query: 641 aagatcaacaagataatgtcaaggatcactggaaagcctgaagagcagattgatgaggac 700 ||||||||||| ||| ||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 78 aagatcaacaaaatactgtcaagaatcaccgggaagcctgaagagcagattgatgaggat 137 Query: 701 acgaggttcgactctttcatgagtccttgggaggccaaggattatggaataattgacagc 760 || | ||| |||| |||||||||||||||||| |||||||||||||| ||| |||||||| Sbjct: 138 acaaagtttgactatttcatgagtccttgggaagccaaggattatggcatagttgacagc 197 Query: 761 attatagacgagggaaaacttggattggtagctcctgtatcgggagctgtgccaccccca 820 ||||||| || || || | || ||||| |||||| | | |||||||||||||| ||| Sbjct: 198 gttatagatgaagggaagccggggttggttgctcctttggcaggagctgtgccacctcca 257 Query: 821 aaatcacgtatgtggtacttgtggaacgcttcaggaccaactagaaaaataatgaaaaat 880 ||||| ||| |||||||||| ||||| ||||||||||||||||||||||| ||||||||| Sbjct: 258 aaatcgcgtgtgtggtacttatggaatgcttcaggaccaactagaaaaatcatgaaaaat 317 Query: 881 ctaccttcagaggaaaagctcattcgaaatggtaatggcagcgtaagtggag 932 |||||||||||||| ||||| |||| ||||||||||||||| | |||||||| Sbjct: 318 ctaccttcagaggagaagcttattcaaaatggtaatggcagtgcaagtggag 369
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 270 bits (136), Expect = 1e-68 Identities = 169/180 (93%) Strand = Plus / Plus Query: 414 caggaatggggatttatgatgccatgaaattttgcaaggctgatatctcaaccgtttgct 473 |||||||||| |||||||||||||||||||||||||||||||||| ||||| || |||| Sbjct: 17746815 caggaatgggagtttatgatgccatgaaattttgcaaggctgatatatcaactgtctgct 17746874 Query: 474 ttggattggcggcttccatgggtgcatttttgttagctgctgggacaaagggaaagagat 533 ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 17746875 ttggactggcggcttccatgggtgcatttttgctagctgctgggacaaaggggaagagat 17746934 Query: 534 tttgcatgccaaatgcgagaattatgatccatcagccatcagggggagctggtgggaagg 593 |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 17746935 tttgcatgcctaatgcgagaattatgatccatcaaccatcagggggtgctggtgggaagg 17746994 Score = 234 bits (118), Expect = 6e-58 Identities = 214/246 (86%) Strand = Plus / Plus Query: 687 agattgatgaggacacgaggttcgactctttcatgagtccttgggaggccaaggattatg 746 ||||||||||||| || | ||| |||| |||||||||||||||||| ||||||||||||| Sbjct: 17747502 agattgatgaggatacaaagtttgactatttcatgagtccttgggaagccaaggattatg 17747561 Query: 747 gaataattgacagcattatagacgagggaaaacttggattggtagctcctgtatcgggag 806 | ||| |||||||| ||||||| || || || | || ||||| |||||| | | |||| Sbjct: 17747562 gcatagttgacagcgttatagatgaagggaagccggggttggttgctcctttggcaggag 17747621 Query: 807 ctgtgccacccccaaaatcacgtatgtggtacttgtggaacgcttcaggaccaactagaa 866 |||||||||| |||||||| ||| |||||||||| ||||| ||||||||||||||||||| Sbjct: 17747622 ctgtgccacctccaaaatcgcgtgtgtggtacttatggaatgcttcaggaccaactagaa 17747681 Query: 867 aaataatgaaaaatctaccttcagaggaaaagctcattcgaaatggtaatggcagcgtaa 926 |||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||| | || Sbjct: 17747682 aaatcatgaaaaatctaccttcagaggagaagcttattcaaaatggtaatggcagtgcaa 17747741 Query: 927 gtggag 932 |||||| Sbjct: 17747742 gtggag 17747747 Score = 99.6 bits (50), Expect = 2e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 595 cacagagatgggattgcagataacagaaatgctctatgagaagataaagatcaacaagat 654 ||||||||||||||| |||||| ||| ||| | ||||||||||||||||||||||| || Sbjct: 17747325 cacagagatgggattacagatacgagagatgatgtatgagaagataaagatcaacaaaat 17747384 Query: 655 aatgtcaaggatcactggaaagcctgaagagcag 688 | ||||||| ||||| || ||||||||||||||| Sbjct: 17747385 actgtcaagaatcaccgggaagcctgaagagcag 17747418 Score = 73.8 bits (37), Expect = 1e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 239 ctcgaggagttggacaccagcaacatgcttctccgccagcggatcatctttctcggctcc 298 ||||||||| ||||||||| ||||||||| || |||||||| ||| |||| ||||||||| Sbjct: 17742764 ctcgaggagctggacaccaccaacatgctccttcgccagcgcatcgtcttcctcggctcc 17742823 Query: 299 ccggt 303 ||||| Sbjct: 17742824 ccggt 17742828 Score = 73.8 bits (37), Expect = 1e-09 Identities = 97/117 (82%) Strand = Plus / Plus Query: 301 ggtggatgatttgaatgcggatcttatcaccagtcaactgttactattggatgcaaagga 360 |||||||||| ||| ||| |||||||||| ||| ||||| || || ||||||| |||| Sbjct: 17744131 ggtggatgatatgagtgctgatcttatcatcagccaactcttgctgctggatgctgagga 17744190 Query: 361 ccacacaaaggacatcaagttgtttattaattcacccggaggctccatcactgcagg 417 | || ||||||||||| ||||||||||| ||||| ||||||||||| || ||||| Sbjct: 17744191 taaaactaaggacatcaaattgtttattaactcacctggaggctccataacagcagg 17744247
>dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0094H06 Length = 147245 Score = 270 bits (136), Expect = 1e-68 Identities = 169/180 (93%) Strand = Plus / Plus Query: 414 caggaatggggatttatgatgccatgaaattttgcaaggctgatatctcaaccgtttgct 473 |||||||||| |||||||||||||||||||||||||||||||||| ||||| || |||| Sbjct: 128350 caggaatgggagtttatgatgccatgaaattttgcaaggctgatatatcaactgtctgct 128409 Query: 474 ttggattggcggcttccatgggtgcatttttgttagctgctgggacaaagggaaagagat 533 ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 128410 ttggactggcggcttccatgggtgcatttttgctagctgctgggacaaaggggaagagat 128469 Query: 534 tttgcatgccaaatgcgagaattatgatccatcagccatcagggggagctggtgggaagg 593 |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 128470 tttgcatgcctaatgcgagaattatgatccatcaaccatcagggggtgctggtgggaagg 128529 Score = 234 bits (118), Expect = 6e-58 Identities = 214/246 (86%) Strand = Plus / Plus Query: 687 agattgatgaggacacgaggttcgactctttcatgagtccttgggaggccaaggattatg 746 ||||||||||||| || | ||| |||| |||||||||||||||||| ||||||||||||| Sbjct: 129037 agattgatgaggatacaaagtttgactatttcatgagtccttgggaagccaaggattatg 129096 Query: 747 gaataattgacagcattatagacgagggaaaacttggattggtagctcctgtatcgggag 806 | ||| |||||||| ||||||| || || || | || ||||| |||||| | | |||| Sbjct: 129097 gcatagttgacagcgttatagatgaagggaagccggggttggttgctcctttggcaggag 129156 Query: 807 ctgtgccacccccaaaatcacgtatgtggtacttgtggaacgcttcaggaccaactagaa 866 |||||||||| |||||||| ||| |||||||||| ||||| ||||||||||||||||||| Sbjct: 129157 ctgtgccacctccaaaatcgcgtgtgtggtacttatggaatgcttcaggaccaactagaa 129216 Query: 867 aaataatgaaaaatctaccttcagaggaaaagctcattcgaaatggtaatggcagcgtaa 926 |||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||| | || Sbjct: 129217 aaatcatgaaaaatctaccttcagaggagaagcttattcaaaatggtaatggcagtgcaa 129276 Query: 927 gtggag 932 |||||| Sbjct: 129277 gtggag 129282 Score = 99.6 bits (50), Expect = 2e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 595 cacagagatgggattgcagataacagaaatgctctatgagaagataaagatcaacaagat 654 ||||||||||||||| |||||| ||| ||| | ||||||||||||||||||||||| || Sbjct: 128860 cacagagatgggattacagatacgagagatgatgtatgagaagataaagatcaacaaaat 128919 Query: 655 aatgtcaaggatcactggaaagcctgaagagcag 688 | ||||||| ||||| || ||||||||||||||| Sbjct: 128920 actgtcaagaatcaccgggaagcctgaagagcag 128953 Score = 73.8 bits (37), Expect = 1e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 239 ctcgaggagttggacaccagcaacatgcttctccgccagcggatcatctttctcggctcc 298 ||||||||| ||||||||| ||||||||| || |||||||| ||| |||| ||||||||| Sbjct: 124299 ctcgaggagctggacaccaccaacatgctccttcgccagcgcatcgtcttcctcggctcc 124358 Query: 299 ccggt 303 ||||| Sbjct: 124359 ccggt 124363 Score = 73.8 bits (37), Expect = 1e-09 Identities = 97/117 (82%) Strand = Plus / Plus Query: 301 ggtggatgatttgaatgcggatcttatcaccagtcaactgttactattggatgcaaagga 360 |||||||||| ||| ||| |||||||||| ||| ||||| || || ||||||| |||| Sbjct: 125666 ggtggatgatatgagtgctgatcttatcatcagccaactcttgctgctggatgctgagga 125725 Query: 361 ccacacaaaggacatcaagttgtttattaattcacccggaggctccatcactgcagg 417 | || ||||||||||| ||||||||||| ||||| ||||||||||| || ||||| Sbjct: 125726 taaaactaaggacatcaaattgtttattaactcacctggaggctccataacagcagg 125782
>gb|AF514859.1| Oryza sativa (indica cultivar-group) ATP-dependent Clp protease (Pi-HIT-1) gene, complete cds Length = 2750 Score = 262 bits (132), Expect = 3e-66 Identities = 168/180 (93%) Strand = Plus / Plus Query: 414 caggaatggggatttatgatgccatgaaattttgcaaggctgatatctcaaccgtttgct 473 |||||||||| |||||||||||||||||||||||||||||||||| ||||| || |||| Sbjct: 1249 caggaatgggagtttatgatgccatgaaattttgcaaggctgatatatcaactgtctgct 1308 Query: 474 ttggattggcggcttccatgggtgcatttttgttagctgctgggacaaagggaaagagat 533 ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 1309 ttggactggcggcttccatgggtgcatttttgctagctgctgggacaaaggggaagagat 1368 Query: 534 tttgcatgccaaatgcgagaattatgatccatcagccatcagggggagctggtgggaagg 593 |||||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 1369 tttgcatgcctaatgcaagaattatgatccatcaaccatcagggggtgctggtgggaagg 1428 Score = 234 bits (118), Expect = 6e-58 Identities = 214/246 (86%) Strand = Plus / Plus Query: 687 agattgatgaggacacgaggttcgactctttcatgagtccttgggaggccaaggattatg 746 ||||||||||||| || | ||| |||| |||||||||||||||||| ||||||||||||| Sbjct: 1937 agattgatgaggatacaaagtttgactatttcatgagtccttgggaagccaaggattatg 1996 Query: 747 gaataattgacagcattatagacgagggaaaacttggattggtagctcctgtatcgggag 806 | ||| |||||||| ||||||| || || || | || ||||| |||||| | | |||| Sbjct: 1997 gcatagttgacagcgttatagatgaagggaagccggggttggttgctcctttggcaggag 2056 Query: 807 ctgtgccacccccaaaatcacgtatgtggtacttgtggaacgcttcaggaccaactagaa 866 |||||||||| |||||||| ||| |||||||||| ||||| ||||||||||||||||||| Sbjct: 2057 ctgtgccacctccaaaatcgcgtgtgtggtacttatggaatgcttcaggaccaactagaa 2116 Query: 867 aaataatgaaaaatctaccttcagaggaaaagctcattcgaaatggtaatggcagcgtaa 926 |||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||| | || Sbjct: 2117 aaatcatgaaaaatctaccttcagaggagaagcttattcaaaatggtaatggcagtgcaa 2176 Query: 927 gtggag 932 |||||| Sbjct: 2177 gtggag 2182 Score = 99.6 bits (50), Expect = 2e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 595 cacagagatgggattgcagataacagaaatgctctatgagaagataaagatcaacaagat 654 ||||||||||||||| |||||| ||| ||| | ||||||||||||||||||||||| || Sbjct: 1760 cacagagatgggattacagatacgagagatgatgtatgagaagataaagatcaacaaaat 1819 Query: 655 aatgtcaaggatcactggaaagcctgaagagcag 688 | ||||||| ||||| || ||||||||||||||| Sbjct: 1820 actgtcaagaatcaccgggaagcctgaagagcag 1853
>gb|AY107538.1| Zea mays PCO073954 mRNA sequence Length = 607 Score = 105 bits (53), Expect = 4e-19 Identities = 199/244 (81%), Gaps = 3/244 (1%) Strand = Plus / Plus Query: 259 caacatgcttctccgccagcggatcatctttctcggctccccggtggatgatttgaatgc 318 ||||||||| || |||||||| ||| |||| || || ||||||||||||||| | ||| Sbjct: 355 caacatgctccttcgccagcgcatcgtcttcctgggttccccggtggatgatacaagtgc 414 Query: 319 ggatcttatcaccagtcaactgttactattggatgcaaaggaccacacaaaggacatcaa 378 ||||| || | ||| ||||| |||||||||||||| ||||||| || || || || || Sbjct: 415 tgatctcattatcagccaactcctactattggatgcagaggaccagactaaagatattaa 474 Query: 379 gttgtttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccat 438 |||||||| || ||||| |||||||| || || ||||| ||||| | |||||||| || Sbjct: 475 attgtttatcaactcacctggaggctctataacagcagggatgggagtatatgatgctat 534 Query: 439 gaaattttgcaaggctgatatctcaaccgtttgctttggattggcggcttccatgggtgc 498 |||||||||||| |||||| | |||| |||| |||| |||||||||||| |||||||| Sbjct: 535 gaaattttgcaaagctgatgtgtcaa-tgttt-cttt-gattggcggcttnaatgggtgc 591 Query: 499 attt 502 |||| Sbjct: 592 attt 595
>gb|AC182576.2| Mimulus guttatus clone MGBa-89I12, complete sequence Length = 113881 Score = 56.0 bits (28), Expect = 3e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 240 tcgaggagttggacaccagcaacatgcttctccgccagcggatcatctttctcggctccc 299 |||||||| | ||||||| |||||||||||| |||||| | ||||||||| | ||||||| Sbjct: 55443 tcgaggagctcgacaccaccaacatgcttcttcgccagagaatcatctttttgggctccc 55384 Score = 48.1 bits (24), Expect = 0.080 Identities = 33/36 (91%) Strand = Plus / Minus Query: 371 gacatcaagttgtttattaattcacccggaggctcc 406 |||||||||||||| |||||||| ||||| |||||| Sbjct: 55115 gacatcaagttgttcattaattcgcccggtggctcc 55080 Score = 44.1 bits (22), Expect = 1.3 Identities = 37/42 (88%) Strand = Plus / Minus Query: 647 aacaagataatgtcaaggatcactggaaagcctgaagagcag 688 ||||||||| | ||||| ||||||| ||||||||||||||| Sbjct: 53789 aacaagatactatcaagagtcactgggaagcctgaagagcag 53748
>gb|AY496111.1| Capsicum annuum ClpP putative protein mRNA, partial sequence Length = 624 Score = 54.0 bits (27), Expect = 0.001 Identities = 75/91 (82%) Strand = Plus / Plus Query: 367 aaaggacatcaagttgtttattaattcacccggaggctccatcactgcaggaatggggat 426 ||||||||||| ||| | ||||||||||| || || || | ||||| || ||||| || Sbjct: 392 aaaggacatcacattgatcattaattcacctggtggttcagtaactgctgggatgggaat 451 Query: 427 ttatgatgccatgaaattttgcaaggctgat 457 ||||||||||||||| | |||||||||||| Sbjct: 452 ctatgatgccatgaaaatgtgcaaggctgat 482
>gb|L41144.1|BNACLPPA Brassica oleracea ClpP (clpP) mRNA, partial cds Length = 971 Score = 52.0 bits (26), Expect = 0.005 Identities = 53/62 (85%) Strand = Plus / Plus Query: 381 tgtttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccatga 440 ||||||| ||||||||||| || || |||||||| || ||||| || |||||||| |||| Sbjct: 295 tgtttatcaattcacccggtggttctatcactgctgggatgggaatatatgatgcaatga 354 Query: 441 aa 442 || Sbjct: 355 aa 356
>dbj|AP009180.1| Candidatus Carsonella ruddii PV DNA, complete genome Length = 159662 Score = 46.1 bits (23), Expect = 0.32 Identities = 71/87 (81%) Strand = Plus / Plus Query: 491 atgggtgcatttttgttagctgctgggacaaagggaaagagattttgcatgccaaatgcg 550 |||| |||| ||||||||||||| || | ||| ||||| ||||||||| | || ||| | Sbjct: 65703 atggctgcagttttgttagctgcaggtaaaaaaggaaaaagattttgctttcctaattca 65762 Query: 551 agaattatgatccatcagccatcaggg 577 ||||| ||||| ||||| |||| |||| Sbjct: 65763 agaataatgattcatcaaccattaggg 65789
>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete genome Length = 686194 Score = 46.1 bits (23), Expect = 0.32 Identities = 32/35 (91%) Strand = Plus / Minus Query: 485 gcttccatgggtgcatttttgttagctgctgggac 519 ||||||||||||||||| ||| | ||||||||||| Sbjct: 281007 gcttccatgggtgcattcttgcttgctgctgggac 280973
>gb|DQ158856.1| Bigelowiella natans nucleomorph chromosome 1, partial sequence Length = 140590 Score = 46.1 bits (23), Expect = 0.32 Identities = 26/27 (96%) Strand = Plus / Minus Query: 485 gcttccatgggtgcatttttgttagct 511 ||||| ||||||||||||||||||||| Sbjct: 83017 gcttcaatgggtgcatttttgttagct 82991
>gb|AY267691.1| Bigelowiella natans ClpP protease mRNA, partial cds; nuclear gene for plastid product Length = 867 Score = 46.1 bits (23), Expect = 0.32 Identities = 26/27 (96%) Strand = Plus / Plus Query: 485 gcttccatgggtgcatttttgttagct 511 ||||| ||||||||||||||||||||| Sbjct: 394 gcttcaatgggtgcatttttgttagct 420
>gb|DQ071229.1| Bigelowiella natans clone 3 clpP2 mRNA, partial sequence; nucleomorph Length = 832 Score = 46.1 bits (23), Expect = 0.32 Identities = 26/27 (96%) Strand = Plus / Plus Query: 485 gcttccatgggtgcatttttgttagct 511 ||||| ||||||||||||||||||||| Sbjct: 395 gcttcaatgggtgcatttttgttagct 421
>gb|DQ071224.1| Bigelowiella natans clone 2 clpP2 mRNA, partial sequence; nucleomorph Length = 857 Score = 46.1 bits (23), Expect = 0.32 Identities = 26/27 (96%) Strand = Plus / Plus Query: 485 gcttccatgggtgcatttttgttagct 511 ||||| ||||||||||||||||||||| Sbjct: 396 gcttcaatgggtgcatttttgttagct 422
>gb|DQ071217.1| Bigelowiella natans clone 4 clpP2 mRNA, partial sequence; nucleomorph Length = 813 Score = 46.1 bits (23), Expect = 0.32 Identities = 26/27 (96%) Strand = Plus / Plus Query: 485 gcttccatgggtgcatttttgttagct 511 ||||| ||||||||||||||||||||| Sbjct: 388 gcttcaatgggtgcatttttgttagct 414
>gb|AC146385.4| Pan troglodytes BAC clone RP43-126C6 from 7, complete sequence Length = 162268 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 aaaaagtggaaggtgaagcagc 48 |||||||||||||||||||||| Sbjct: 15897 aaaaagtggaaggtgaagcagc 15918
>gb|AC146213.2| Pan troglodytes BAC clone RP43-33O10 from 7, complete sequence Length = 187649 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 aaaaagtggaaggtgaagcagc 48 |||||||||||||||||||||| Sbjct: 120053 aaaaagtggaaggtgaagcagc 120032
>emb|AL445532.8| Human DNA sequence from clone RP11-263K15 on chromosome 9 Contains the 3' end of the NTRK2 gene for Neurotrophic tyrosine kinase, receptor, type 2 (TRKB), complete sequence Length = 171629 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 856 accaactagaaaaataatgaaa 877 |||||||||||||||||||||| Sbjct: 49856 accaactagaaaaataatgaaa 49835
>gb|AC123967.3| Sminthopsis macroura clone 102C13, complete sequence Length = 59818 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 511 tgctgggacaaagggaaagaga 532 |||||||||||||||||||||| Sbjct: 53011 tgctgggacaaagggaaagaga 53032
>gb|AC083865.2|AC083865 Homo sapiens chromosome 7 clone RP11-605P22, complete sequence Length = 218186 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 aaaaagtggaaggtgaagcagc 48 |||||||||||||||||||||| Sbjct: 2894 aaaaagtggaaggtgaagcagc 2915
>gb|AC083860.2|AC083860 Homo sapiens chromosome 7 clone RP11-3P18, complete sequence Length = 165120 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 aaaaagtggaaggtgaagcagc 48 |||||||||||||||||||||| Sbjct: 47066 aaaaagtggaaggtgaagcagc 47087
>gb|AC188432.3| Pan troglodytes BAC clone CH251-676M19 from chromosome 7, complete sequence Length = 202108 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1228 gtgtatacttgtttttgtcta 1248 ||||||||||||||||||||| Sbjct: 130193 gtgtatacttgtttttgtcta 130173
>ref|XM_786052.2| PREDICTED: Strongylocentrotus purpuratus similar to MGC80481 protein (LOC586264), mRNA Length = 4350 Score = 42.1 bits (21), Expect = 4.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 670 tggaaagcctgaagagcagattgatgaggacac 702 ||||||||||||||||||| |||||| ||||| Sbjct: 612 tggaaagcctgaagagcagcgtgatgatgacac 644
>ref|XM_001199139.1| PREDICTED: Strongylocentrotus purpuratus similar to MGC80481 protein (LOC586264), mRNA Length = 4350 Score = 42.1 bits (21), Expect = 4.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 670 tggaaagcctgaagagcagattgatgaggacac 702 ||||||||||||||||||| |||||| ||||| Sbjct: 612 tggaaagcctgaagagcagcgtgatgatgacac 644
>ref|XM_392540.3| PREDICTED: Apis mellifera similar to Putative ATP-dependent Clp protease proteolytic subunit, mitochondrial precursor (Endopeptidase Clp) (LOC409011), mRNA Length = 1087 Score = 42.1 bits (21), Expect = 4.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 540 tgccaaatgcgagaattatgatccatcagccatcagg 576 |||| ||||| |||||||||| |||||||||||||| Sbjct: 783 tgcctaatgcaagaattatgacacatcagccatcagg 819
>gb|AC182700.2| Populus trichocarpa clone Pop1-73H20, complete sequence Length = 90044 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1119 tgtattgtaatattatttttc 1139 ||||||||||||||||||||| Sbjct: 19321 tgtattgtaatattatttttc 19341
>ref|XM_969571.1| PREDICTED: Tribolium castaneum similar to Putative ATP-dependent Clp protease proteolytic subunit, mitochondrial precursor (Endopeptidase Clp) (LOC663531), mRNA Length = 777 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 552 gaattatgatccatcagccatcagg 576 ||||||||||||||||||| ||||| Sbjct: 461 gaattatgatccatcagccttcagg 485
>gb|AE009001.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 27 of 256 of the complete sequence Length = 11563 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 atggcgaccatcacggcgcct 70 ||||||||||||||||||||| Sbjct: 794 atggcgaccatcacggcgcct 774
>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete cds Length = 590284 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 251346 aaaagtggaaggtgaagcagc 251366
>gb|AF445418.1| Homo sapiens FP7189 mRNA, complete cds Length = 1566 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 790 aaaagtggaaggtgaagcagc 770
>gb|AC007130.2| Homo sapiens BAC clone GS1-98E2 from 7, complete sequence Length = 135553 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 5946 aaaagtggaaggtgaagcagc 5966
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 atggcgaccatcacggcgcct 70 ||||||||||||||||||||| Sbjct: 286130 atggcgaccatcacggcgcct 286110
>gb|DQ071215.1| Bigelowiella natans clpP2 mRNA, partial sequence Length = 874 Score = 42.1 bits (21), Expect = 4.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 485 gcttccatgggtgcatttttgttagct 511 ||||| ||||| ||||||||||||||| Sbjct: 393 gcttcnatgggngcatttttgttagct 419
>gb|AC090574.6| Homo sapiens chromosome 8, clone RP11-449M6, complete sequence Length = 172969 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 103447 aaaagtggaaggtgaagcagc 103427
>gb|AC163758.3| Pan troglodytes BAC clone CH251-221N15 from chromosome 7, complete sequence Length = 157318 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 90809 aaaagtggaaggtgaagcagc 90789
>gb|AC025428.10| Homo sapiens chromosome 10 clone RP11-475D12, complete sequence Length = 174906 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1126 taatattatttttcctgtata 1146 ||||||||||||||||||||| Sbjct: 81051 taatattatttttcctgtata 81071
>gb|AC093283.3| Homo sapiens chromosome 5 clone RP11-428C6, complete sequence Length = 206254 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 487 ttccatgggtgcatttttgtt 507 ||||||||||||||||||||| Sbjct: 78699 ttccatgggtgcatttttgtt 78719
>gb|AC025370.12| Homo sapiens chromosome 8, clone RP11-318M2, complete sequence Length = 193589 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 48286 aaaagtggaaggtgaagcagc 48306
>gb|AC069351.5| Homo sapiens chromosome 8, clone RP11-432K23, complete sequence Length = 111496 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 18407 aaaagtggaaggtgaagcagc 18387
>emb|Z85986.1|HS108K11 Human DNA sequence from clone RP1-108K11 on chromosome 6p21 Contains the SFRS3 for splicing factor arginine/serine-rich (SRP20), the STK38 gene for serine/threonine protein kinase (NDR), the 3' end of a gene for a novel protein (2410004NRIK) and a CpG island, complete sequence Length = 145616 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 24 aacaaaaagtggaaggtgaagcagc 48 ||||||||||| ||||||||||||| Sbjct: 11386 aacaaaaagtgcaaggtgaagcagc 11362
>emb|AL603752.6| Human DNA sequence from clone RP11-296A1 on chromosome 1 Contains part of the ESRRG gene for estrogen-related receptor gamma, complete sequence Length = 48868 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 22004 aaaagtggaaggtgaagcagc 21984
>emb|AL596327.5| Human DNA sequence from clone RP11-110F24 on chromosome 1, complete sequence Length = 94737 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 859 aactagaaaaataatgaaaaa 879 ||||||||||||||||||||| Sbjct: 33447 aactagaaaaataatgaaaaa 33427
>emb|AL500526.13| Human DNA sequence from clone RP11-281J22 on chromosome 10, complete sequence Length = 60328 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 36925 aaaagtggaaggtgaagcagc 36905
>emb|AL359197.20| Human DNA sequence from clone RP11-498I18 on chromosome 1, complete sequence Length = 191686 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 80750 aaaagtggaaggtgaagcagc 80770
>emb|AL357041.11| Human DNA sequence from clone RP11-221L2 on chromosome 1 Contains ESTs, STSs and GSSs, complete sequence Length = 130794 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 50884 aaaagtggaaggtgaagcagc 50864
>gb|AC160835.2| Sequence of Xenopus tropicalis BAC clone ISB1-8A8 containing the 3'end of FRZ3, complete sequence Length = 42373 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 611 cagataacagaaatgctctat 631 ||||||||||||||||||||| Sbjct: 391 cagataacagaaatgctctat 371
>gb|AC080093.6| Homo sapiens BAC clone RP11-957J11 from 7, complete sequence Length = 37522 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1228 gtgtatacttgtttttgtcta 1248 ||||||||||||||||||||| Sbjct: 23609 gtgtatacttgtttttgtcta 23589
>gb|AC160942.1| Pan troglodytes BAC clone CH251-443J9 from chromosome unknown, complete sequence Length = 182340 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 163085 aaaagtggaaggtgaagcagc 163105
>gb|AC149149.3| Xenopus tropicalis clone ISB-175F5, complete sequence Length = 116498 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 tgggtgcatttttgttagctg 512 ||||||||||||||||||||| Sbjct: 85910 tgggtgcatttttgttagctg 85930
>gb|AC092652.2| Homo sapiens BAC clone RP11-434H14 from 2, complete sequence Length = 161975 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 76137 aaaagtggaaggtgaagcagc 76117
>emb|BX571721.8| Zebrafish DNA sequence from clone DKEY-250L23 in linkage group 8, complete sequence Length = 168402 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 885 cttcagaggaaaagctcattc 905 ||||||||||||||||||||| Sbjct: 132415 cttcagaggaaaagctcattc 132435
>gb|AC111200.7| Homo sapiens BAC clone RP11-1283H4 from 2, complete sequence Length = 186752 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 63173 aaaagtggaaggtgaagcagc 63193
>gb|AC004241.2| Homo sapiens 12 PAC RP3-197B17 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 136877 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 60147 aaaagtggaaggtgaagcagc 60127
>emb|BX005018.8| Zebrafish DNA sequence from clone DKEY-209K18, complete sequence Length = 183614 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 885 cttcagaggaaaagctcattc 905 ||||||||||||||||||||| Sbjct: 111761 cttcagaggaaaagctcattc 111781
>gb|AF363578.1| Homo sapiens ATPase H+ transporting lysosomal protein (ATP6C) gene, complete cds; BAALC (BAALC) gene, complete cds, alternatively spliced; and frizzled-like protein 6 (FZD6) gene, complete cds Length = 347253 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 298970 aaaagtggaaggtgaagcagc 298950
>dbj|AP005855.2| Homo sapiens genomic DNA, chromosome 8q22, clone: KB1560G11, complete sequence Length = 152531 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 148579 aaaagtggaaggtgaagcagc 148559
>gb|AC006500.4|AC006500 Homo sapiens, clone hRPK.31_A_1, complete sequence Length = 147699 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 55262 aaaagtggaaggtgaagcagc 55282
>gb|U71217.1|HSU71217 Human clone c15H12, 24Kb distal CMT1A-REP sequence Length = 39906 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 24 aacaaaaagtggaaggtgaagcagc 48 ||||||||||| ||||||||||||| Sbjct: 1906 aacaaaaagtgcaaggtgaagcagc 1930
>gb|AC005389.1|AC005389 Homo sapiens chromosome 17, clone hRPK.601_N_13, complete sequence Length = 120359 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 24 aacaaaaagtggaaggtgaagcagc 48 ||||||||||| ||||||||||||| Sbjct: 17604 aacaaaaagtgcaaggtgaagcagc 17580
>dbj|AP004221.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1896D3 Length = 160197 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 aaaagtggaaggtgaagcagc 48 ||||||||||||||||||||| Sbjct: 30429 aaaagtggaaggtgaagcagc 30409 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 243,659,720 Number of extensions: 13365606 Number of successful extensions: 503764 Number of sequences better than 10.0: 64 Number of HSP's gapped: 503752 Number of HSP's successfully gapped: 76 Length of query: 1302 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1279 Effective length of database: 18,503,978,556 Effective search space: 23666588573124 Effective search space used: 23666588573124 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)