ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf32j16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001057952.1| Oryza sativa (japonica cultivar-group) Os03g0773600 (Os03g0773600) mRNA, complete cds Length = 2834 Score = 1731 bits (873), Expect = 0.0 Identities = 1539/1761 (87%) Strand = Plus / Plus Query: 58 gcaatgcccaccatccgggctccggcttccaggcagacggccacgctgcaggtggccgtc 117 |||||||| | |||||| ||||||||||||| ||||||||||||||| |||||||| || Sbjct: 12 gcaatgccgagcatccgagctccggcttccaagcagacggccacgctacaggtggctgtg 71 Query: 118 aagtgcaggccgctgaccgacaacgagagccggcgctcgcggcacatcatacaagtcatt 177 ||||||||||| ||||| |||| |||| ||||| |||||||| ||||||||||||||| Sbjct: 72 aagtgcaggccactgacagacagcgagcagcggcgttcgcggcatatcatacaagtcatt 131 Query: 178 gacgataagaatgtggccgtgttggaccctgatgtctccaagggctacctcgacctcatc 237 || ||||||||||| | ||| ||||||||||| | ||||||| |||||| || |||||| Sbjct: 132 gatgataagaatgtcgttgtgctggaccctgatctgtccaaggactaccttgaactcatc 191 Query: 238 caaaaccggaccaaggagaagagatatagcttcgatcacgtttacgcacctggatgctcc 297 |||||| |||||||||||| ||||| ||||||||||| || || || || || |||||| Sbjct: 192 caaaacaggaccaaggagagaagatacagcttcgatcatgtgtatgcgcccgggtgctcc 251 Query: 298 aatacggatgtttataagaatatctctcccacagttttgggtgtagttcaaggtcttaat 357 ||| ||||||| ||||||||||| ||| | ||| || |||||||||||||| |||||| Sbjct: 252 aatgcggatgtatataagaatatatcttctacaattgctggtgtagttcaaggccttaat 311 Query: 358 gtgacagtctttgcctatggctctactggaagtggcaaaacatatacgatggttggaagc 417 | |||||||||||| ||||| |||||||||||||| ||||| ||||| |||||||||| | Sbjct: 312 gcgacagtctttgcttatggttctactggaagtgggaaaacttatacaatggttggaacc 371 Query: 418 aggaatgatcctggtcttatggttcttagcttccgcacaatctttgatcaaataaaaaag 477 | ||||||||||||||||||||| ||||| |||||||||||||||| |||| ||| Sbjct: 372 catagtgatcctggtcttatggttctgagctttcgcacaatctttgatctggtaaagaag 431 Query: 478 gatgatagttcagatacatttgaagtctcatgttcatacctggaagtatacaatgaggtt 537 ||||| ||| |||||| ||||| |||||||||||||| || ||||| |||||||||||| Sbjct: 432 gatgacagtaaagatacgtttgaggtctcatgttcatatcttgaagtgtacaatgaggtt 491 Query: 538 atctatgatttgcttgagaaatcctcgggtcacctagagcttcgtgaggatcccgagcat 597 ||||||||||||||||| ||||| || |||||||| ||||||||||| ||||| | |||| Sbjct: 492 atctatgatttgcttgaaaaatcgtcaggtcacctggagcttcgtgaagatcctgtgcat 551 Query: 598 ggcataatagttgctggtttaagaagaattaaggtccattcagcagataagatccttgaa 657 || ||||| ||||||||||||||||| |||||||| || |||||||||||||| |||||| Sbjct: 552 ggtataatggttgctggtttaagaagcattaaggttcactcagcagataagattcttgaa 611 Query: 658 ctcttgaacataggcaacagcagacgcaagacagagagcacggaagcaaacgcaacttct 717 |||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||| Sbjct: 612 ctcttgaacataggcaacagtcggcgcaagacagagagcacagaagcaaactcaacttct 671 Query: 718 tcacgttcacacgctgtactggagattactgtaagacgcaagcagaaaggaaaatatggt 777 ||||| ||||| ||||| |||||||| ||||| | || || || |||||| |||||||| Sbjct: 672 tcacggtcacatgctgtcctggagataactgtgaagcgaaaacaaaaaggacaatatggt 731 Query: 778 agtcaagttcttcgtggaaagcttgccttggttgatctggcgggcagtgagagggctact 837 ||||| |||||||||||||||||||| |||||||| || ||||||||||||||||| || Sbjct: 732 agtcaggttcttcgtggaaagcttgcgttggttgaccttgcgggcagtgagagggcctct 791 Query: 838 gaaacgaacaattttggccaaaagcttagagatggagcaaacattaataagtcactccta 897 ||||| ||||| ||||| |||||||||||||||||||| |||||||| ||||| ||| Sbjct: 792 gaaacaaacaactttgggcaaaagcttagagatggagccaacattaaccgttcacttcta 851 Query: 898 gcgttagcaaattgcatcaatgccctcggcaagcaaaataagaaaggtctagcatatgtt 957 ||| |||| || |||||||||||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 852 gcgctagcgaactgcatcaatgcccttggcaagcaaaacaagaaaggtcttgcatatgtt 911 Query: 958 ccatatcgcaacagcaaattaactcgaattctgaaggatggtctgtctggtaattctcga 1017 |||||||| |||||||||||||| ||||| ||||||||||| || |||||||| ||||| Sbjct: 912 ccatatcgaaacagcaaattaacacgaatcctgaaggatgggctctctggtaactctcgt 971 Query: 1018 actgttatgattgccacaatatcaccagctgatgatcagtatcatcacactaccaataca 1077 ||||||||| |||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 972 actgttatggttgctacgatatcaccagctgatgatcagtatcatcacaccaccaataca 1031 Query: 1078 ctcaagtatgcggatcgtgctaaggagataaaaacacatgtccataaaaatattggaacg 1137 ||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1032 ctcaagtatgctgatcgtgcaaaggagataaaaacacatgtccataaaaacattggacat 1091 Query: 1138 atcgataatcatgttgaagactaccagaggatgatagagaatctccagggtgaggtctcc 1197 | || | ||||||||||||||| | |||||||| || |||||||||| |||||| || Sbjct: 1092 cttgacacccatgttgaagactacaaaaggatgattgacaatctccaggttgaggtttct 1151 Query: 1198 cagttgaaaaaggaattagctgacaaggagcatcagttaagcgtaaaacctactgaaaag 1257 |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 1152 cagttgaagaaggaattagctgagaaggagcatcagttaagtgtaaaacctactgaaaaa 1211 Query: 1258 gctgcagataatgagctatcttggctaaatgtcttgagtcaggaaactggtgaaaatgtt 1317 |||||||| ||||||||||||||||||||| ||||||| ||||||||||| || |||||| Sbjct: 1212 gctgcagacaatgagctatcttggctaaatatcttgagccaggaaactggcgagaatgtt 1271 Query: 1318 caggaacgcataaatctacagaaggcactgtttgaacttgaagaaaccaacaagcgtaac 1377 || |||||||| ||||| ||||| |||||||||||||||||||||||||| ||||| || Sbjct: 1272 caagaacgcattaatctgcagaaagcactgtttgaacttgaagaaaccaataagcgcaat 1331 Query: 1378 cggatggagctccagcatcttgacggtgcaattgcaagaccgcaggtgaatgagaaggat 1437 || |||||||||||||||||||| | |||||||||||||| |||||||| || |||||| Sbjct: 1332 cgaatggagctccagcatcttgatgatgcaattgcaagacaacaggtgaaagataaggat 1391 Query: 1438 tatgcccttttccaagccttaacatcaaggaggcaagttattcttgacaacatccgtgac 1497 | || || | ||||| ||||||||| |||| |||||||||||||||||||| || ||| Sbjct: 1392 tcggctgttctgcaagcattaacatcacggagacaagttattcttgacaacatacgcgac 1451 Query: 1498 aatgacgaagctggtgctggctacagaaaggatattgaactgaatgagagtcgtaggcgc 1557 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 1452 aatgatgaagctggtgctggctacagaaaggatattgaactgaatgagagtcgcaaacgt 1511 Query: 1558 caactccaagatatgatcgaggaagctactagtaacaatgggaacaggacttaccttcag 1617 |||||||||||||||||||||||||| || ||||||||||| ||||| || ||||| || Sbjct: 1512 caactccaagatatgatcgaggaagccaccagtaacaatggcaacagaacctacctccac 1571 Query: 1618 attctcagccaatacaggcttctgggaatgaataatgctgagcttcaaattgagatggct 1677 |||||||| || ||||| ||||| || |||| |||||| ||||||||||||||||||||| Sbjct: 1572 attctcagtcagtacagacttcttgggatgactaatgccgagcttcaaattgagatggct 1631 Query: 1678 atgcgggaccaagtaatacataatcagagggaatctttaaggagcctatggaacattctc 1737 ||| |||| ||||||||| |||| |||||||||||| ||||||| || ||||||||| | Sbjct: 1632 atgagggatcaagtaatatataaccagagggaatctctaaggagtctgtggaacattatt 1691 Query: 1738 tatagaacagggctaaatcagaaacagattctgaagttggctgctaagcaaggattaact 1797 ||| ||||||||||||| |||||||||||| || | ||||| |||||||| |||||| Sbjct: 1692 tatggaacagggctaaaccagaaacagatttctaaactagctgcgaagcaaggcttaact 1751 Query: 1798 gtagaaggctgtcctttgcct 1818 |||||||||||||||||||| Sbjct: 1752 atagaaggctgtcctttgcct 1772 Score = 165 bits (83), Expect = 1e-36 Identities = 205/245 (83%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 1846 catggaaggctaccaccattcatgtcgtttcctagtccacagtcacagtcttcttcttct 1905 |||||||||||| ||||||||||||| |||||||| || || |||||| ||| ||| Sbjct: 1815 catggaaggctatcaccattcatgtcatttcctagcccgcaatcacagccttattcc--- 1871 Query: 1906 ccatctagttgctttttccaacaaggtttcagcaccatgtctgttctcaaaaatcaacac 1965 || ||| ||||||| ||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 1872 ccgtctgcttgctttgtccaacatggtttcagcaccatgtcttatctcagaaatcaacat 1931 Query: 1966 gaaacacctaccatctgtaggcaggaacatctcagctcttactacatgatgtctggctgc 2025 || || ||||| | ||||||||||| || ||||| ||||||||||||||||||| ||| Sbjct: 1932 gagacgcctacagtatgtaggcaggagcacctcagttcttactacatgatgtctgagtgc 1991 Query: 2026 tcgccttattctggtgatggaaaacaatgggcaagtggagggtcaacgccatacttttct 2085 ||||||| | ||||||||||||||| | ||| |||| |||||| ||||||||||||| Sbjct: 1992 tcgccttttgatggtgatggaaaacagaagacaaatggaaggtcaatgccatacttttct 2051 Query: 2086 acccc 2090 ||||| Sbjct: 2052 acccc 2056 Score = 60.0 bits (30), Expect = 4e-05 Identities = 37/38 (97%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 2476 atggctcactccactcctgtacagtagctgttagtctc 2513 |||||||||||||| ||||||||||||||||||||||| Sbjct: 2662 atggctcactccac-cctgtacagtagctgttagtctc 2698
>dbj|AK103310.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125G15, full insert sequence Length = 2834 Score = 1731 bits (873), Expect = 0.0 Identities = 1539/1761 (87%) Strand = Plus / Plus Query: 58 gcaatgcccaccatccgggctccggcttccaggcagacggccacgctgcaggtggccgtc 117 |||||||| | |||||| ||||||||||||| ||||||||||||||| |||||||| || Sbjct: 12 gcaatgccgagcatccgagctccggcttccaagcagacggccacgctacaggtggctgtg 71 Query: 118 aagtgcaggccgctgaccgacaacgagagccggcgctcgcggcacatcatacaagtcatt 177 ||||||||||| ||||| |||| |||| ||||| |||||||| ||||||||||||||| Sbjct: 72 aagtgcaggccactgacagacagcgagcagcggcgttcgcggcatatcatacaagtcatt 131 Query: 178 gacgataagaatgtggccgtgttggaccctgatgtctccaagggctacctcgacctcatc 237 || ||||||||||| | ||| ||||||||||| | ||||||| |||||| || |||||| Sbjct: 132 gatgataagaatgtcgttgtgctggaccctgatctgtccaaggactaccttgaactcatc 191 Query: 238 caaaaccggaccaaggagaagagatatagcttcgatcacgtttacgcacctggatgctcc 297 |||||| |||||||||||| ||||| ||||||||||| || || || || || |||||| Sbjct: 192 caaaacaggaccaaggagagaagatacagcttcgatcatgtgtatgcgcccgggtgctcc 251 Query: 298 aatacggatgtttataagaatatctctcccacagttttgggtgtagttcaaggtcttaat 357 ||| ||||||| ||||||||||| ||| | ||| || |||||||||||||| |||||| Sbjct: 252 aatgcggatgtatataagaatatatcttctacaattgctggtgtagttcaaggccttaat 311 Query: 358 gtgacagtctttgcctatggctctactggaagtggcaaaacatatacgatggttggaagc 417 | |||||||||||| ||||| |||||||||||||| ||||| ||||| |||||||||| | Sbjct: 312 gcgacagtctttgcttatggttctactggaagtgggaaaacttatacaatggttggaacc 371 Query: 418 aggaatgatcctggtcttatggttcttagcttccgcacaatctttgatcaaataaaaaag 477 | ||||||||||||||||||||| ||||| |||||||||||||||| |||| ||| Sbjct: 372 catagtgatcctggtcttatggttctgagctttcgcacaatctttgatctggtaaagaag 431 Query: 478 gatgatagttcagatacatttgaagtctcatgttcatacctggaagtatacaatgaggtt 537 ||||| ||| |||||| ||||| |||||||||||||| || ||||| |||||||||||| Sbjct: 432 gatgacagtaaagatacgtttgaggtctcatgttcatatcttgaagtgtacaatgaggtt 491 Query: 538 atctatgatttgcttgagaaatcctcgggtcacctagagcttcgtgaggatcccgagcat 597 ||||||||||||||||| ||||| || |||||||| ||||||||||| ||||| | |||| Sbjct: 492 atctatgatttgcttgaaaaatcgtcaggtcacctggagcttcgtgaagatcctgtgcat 551 Query: 598 ggcataatagttgctggtttaagaagaattaaggtccattcagcagataagatccttgaa 657 || ||||| ||||||||||||||||| |||||||| || |||||||||||||| |||||| Sbjct: 552 ggtataatggttgctggtttaagaagcattaaggttcactcagcagataagattcttgaa 611 Query: 658 ctcttgaacataggcaacagcagacgcaagacagagagcacggaagcaaacgcaacttct 717 |||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||| Sbjct: 612 ctcttgaacataggcaacagtcggcgcaagacagagagcacagaagcaaactcaacttct 671 Query: 718 tcacgttcacacgctgtactggagattactgtaagacgcaagcagaaaggaaaatatggt 777 ||||| ||||| ||||| |||||||| ||||| | || || || |||||| |||||||| Sbjct: 672 tcacggtcacatgctgtcctggagataactgtgaagcgaaaacaaaaaggacaatatggt 731 Query: 778 agtcaagttcttcgtggaaagcttgccttggttgatctggcgggcagtgagagggctact 837 ||||| |||||||||||||||||||| |||||||| || ||||||||||||||||| || Sbjct: 732 agtcaggttcttcgtggaaagcttgcgttggttgaccttgcgggcagtgagagggcctct 791 Query: 838 gaaacgaacaattttggccaaaagcttagagatggagcaaacattaataagtcactccta 897 ||||| ||||| ||||| |||||||||||||||||||| |||||||| ||||| ||| Sbjct: 792 gaaacaaacaactttgggcaaaagcttagagatggagccaacattaaccgttcacttcta 851 Query: 898 gcgttagcaaattgcatcaatgccctcggcaagcaaaataagaaaggtctagcatatgtt 957 ||| |||| || |||||||||||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 852 gcgctagcgaactgcatcaatgcccttggcaagcaaaacaagaaaggtcttgcatatgtt 911 Query: 958 ccatatcgcaacagcaaattaactcgaattctgaaggatggtctgtctggtaattctcga 1017 |||||||| |||||||||||||| ||||| ||||||||||| || |||||||| ||||| Sbjct: 912 ccatatcgaaacagcaaattaacacgaatcctgaaggatgggctctctggtaactctcgt 971 Query: 1018 actgttatgattgccacaatatcaccagctgatgatcagtatcatcacactaccaataca 1077 ||||||||| |||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 972 actgttatggttgctacgatatcaccagctgatgatcagtatcatcacaccaccaataca 1031 Query: 1078 ctcaagtatgcggatcgtgctaaggagataaaaacacatgtccataaaaatattggaacg 1137 ||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1032 ctcaagtatgctgatcgtgcaaaggagataaaaacacatgtccataaaaacattggacat 1091 Query: 1138 atcgataatcatgttgaagactaccagaggatgatagagaatctccagggtgaggtctcc 1197 | || | ||||||||||||||| | |||||||| || |||||||||| |||||| || Sbjct: 1092 cttgacacccatgttgaagactacaaaaggatgattgacaatctccaggttgaggtttct 1151 Query: 1198 cagttgaaaaaggaattagctgacaaggagcatcagttaagcgtaaaacctactgaaaag 1257 |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 1152 cagttgaagaaggaattagctgagaaggagcatcagttaagtgtaaaacctactgaaaaa 1211 Query: 1258 gctgcagataatgagctatcttggctaaatgtcttgagtcaggaaactggtgaaaatgtt 1317 |||||||| ||||||||||||||||||||| ||||||| ||||||||||| || |||||| Sbjct: 1212 gctgcagacaatgagctatcttggctaaatatcttgagccaggaaactggcgagaatgtt 1271 Query: 1318 caggaacgcataaatctacagaaggcactgtttgaacttgaagaaaccaacaagcgtaac 1377 || |||||||| ||||| ||||| |||||||||||||||||||||||||| ||||| || Sbjct: 1272 caagaacgcattaatctgcagaaagcactgtttgaacttgaagaaaccaataagcgcaat 1331 Query: 1378 cggatggagctccagcatcttgacggtgcaattgcaagaccgcaggtgaatgagaaggat 1437 || |||||||||||||||||||| | |||||||||||||| |||||||| || |||||| Sbjct: 1332 cgaatggagctccagcatcttgatgatgcaattgcaagacaacaggtgaaagataaggat 1391 Query: 1438 tatgcccttttccaagccttaacatcaaggaggcaagttattcttgacaacatccgtgac 1497 | || || | ||||| ||||||||| |||| |||||||||||||||||||| || ||| Sbjct: 1392 tcggctgttctgcaagcattaacatcacggagacaagttattcttgacaacatacgcgac 1451 Query: 1498 aatgacgaagctggtgctggctacagaaaggatattgaactgaatgagagtcgtaggcgc 1557 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 1452 aatgatgaagctggtgctggctacagaaaggatattgaactgaatgagagtcgcaaacgt 1511 Query: 1558 caactccaagatatgatcgaggaagctactagtaacaatgggaacaggacttaccttcag 1617 |||||||||||||||||||||||||| || ||||||||||| ||||| || ||||| || Sbjct: 1512 caactccaagatatgatcgaggaagccaccagtaacaatggcaacagaacctacctccac 1571 Query: 1618 attctcagccaatacaggcttctgggaatgaataatgctgagcttcaaattgagatggct 1677 |||||||| || ||||| ||||| || |||| |||||| ||||||||||||||||||||| Sbjct: 1572 attctcagtcagtacagacttcttgggatgactaatgccgagcttcaaattgagatggct 1631 Query: 1678 atgcgggaccaagtaatacataatcagagggaatctttaaggagcctatggaacattctc 1737 ||| |||| ||||||||| |||| |||||||||||| ||||||| || ||||||||| | Sbjct: 1632 atgagggatcaagtaatatataaccagagggaatctctaaggagtctgtggaacattatt 1691 Query: 1738 tatagaacagggctaaatcagaaacagattctgaagttggctgctaagcaaggattaact 1797 ||| ||||||||||||| |||||||||||| || | ||||| |||||||| |||||| Sbjct: 1692 tatggaacagggctaaaccagaaacagatttctaaactagctgcgaagcaaggcttaact 1751 Query: 1798 gtagaaggctgtcctttgcct 1818 |||||||||||||||||||| Sbjct: 1752 atagaaggctgtcctttgcct 1772 Score = 165 bits (83), Expect = 1e-36 Identities = 205/245 (83%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 1846 catggaaggctaccaccattcatgtcgtttcctagtccacagtcacagtcttcttcttct 1905 |||||||||||| ||||||||||||| |||||||| || || |||||| ||| ||| Sbjct: 1815 catggaaggctatcaccattcatgtcatttcctagcccgcaatcacagccttattcc--- 1871 Query: 1906 ccatctagttgctttttccaacaaggtttcagcaccatgtctgttctcaaaaatcaacac 1965 || ||| ||||||| ||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 1872 ccgtctgcttgctttgtccaacatggtttcagcaccatgtcttatctcagaaatcaacat 1931 Query: 1966 gaaacacctaccatctgtaggcaggaacatctcagctcttactacatgatgtctggctgc 2025 || || ||||| | ||||||||||| || ||||| ||||||||||||||||||| ||| Sbjct: 1932 gagacgcctacagtatgtaggcaggagcacctcagttcttactacatgatgtctgagtgc 1991 Query: 2026 tcgccttattctggtgatggaaaacaatgggcaagtggagggtcaacgccatacttttct 2085 ||||||| | ||||||||||||||| | ||| |||| |||||| ||||||||||||| Sbjct: 1992 tcgccttttgatggtgatggaaaacagaagacaaatggaaggtcaatgccatacttttct 2051 Query: 2086 acccc 2090 ||||| Sbjct: 2052 acccc 2056 Score = 60.0 bits (30), Expect = 4e-05 Identities = 37/38 (97%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 2476 atggctcactccactcctgtacagtagctgttagtctc 2513 |||||||||||||| ||||||||||||||||||||||| Sbjct: 2662 atggctcactccac-cctgtacagtagctgttagtctc 2698
>dbj|AK059632.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-A05, full insert sequence Length = 1299 Score = 470 bits (237), Expect = e-128 Identities = 417/477 (87%) Strand = Plus / Plus Query: 1342 gcactgtttgaacttgaagaaaccaacaagcgtaaccggatggagctccagcatcttgac 1401 |||||||||||||||||||||||||| ||||| || || |||||||||||||||||||| Sbjct: 2 gcactgtttgaacttgaagaaaccaataagcgcaatcgaatggagctccagcatcttgat 61 Query: 1402 ggtgcaattgcaagaccgcaggtgaatgagaaggattatgcccttttccaagccttaaca 1461 | |||||||||||||| |||||||| || ||||||| || || | ||||| |||||| Sbjct: 62 gatgcaattgcaagacaacaggtgaaagataaggattcggctgttctgcaagcattaaca 121 Query: 1462 tcaaggaggcaagttattcttgacaacatccgtgacaatgacgaagctggtgctggctac 1521 ||| |||| |||||||||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 122 tcacggagacaagttattcttgacaacatacgcgacaatgatgaagctggtgctggctac 181 Query: 1522 agaaaggatattgaactgaatgagagtcgtaggcgccaactccaagatatgatcgaggaa 1581 ||||||||||||||||||||||||||||| | || |||||||||||||||||||||||| Sbjct: 182 agaaaggatattgaactgaatgagagtcgcaaacgtcaactccaagatatgatcgaggaa 241 Query: 1582 gctactagtaacaatgggaacaggacttaccttcagattctcagccaatacaggcttctg 1641 || || ||||||||||| ||||| || ||||| || |||||||| || ||||| ||||| Sbjct: 242 gccaccagtaacaatggcaacagaacctacctccacattctcagtcagtacagacttctt 301 Query: 1642 ggaatgaataatgctgagcttcaaattgagatggctatgcgggaccaagtaatacataat 1701 || |||| |||||| |||||||||||||||||||||||| |||| ||||||||| |||| Sbjct: 302 gggatgactaatgccgagcttcaaattgagatggctatgagggatcaagtaatatataac 361 Query: 1702 cagagggaatctttaaggagcctatggaacattctctatagaacagggctaaatcagaaa 1761 |||||||||||| ||||||| || ||||||||| | ||| ||||||||||||| |||||| Sbjct: 362 cagagggaatctctaaggagtctgtggaacattatttatggaacagggctaaaccagaaa 421 Query: 1762 cagattctgaagttggctgctaagcaaggattaactgtagaaggctgtcctttgcct 1818 |||||| || | ||||| |||||||| |||||| |||||||||||||||||||| Sbjct: 422 cagatttctaaactagctgcgaagcaaggcttaactatagaaggctgtcctttgcct 478 Score = 165 bits (83), Expect = 1e-36 Identities = 205/245 (83%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 1846 catggaaggctaccaccattcatgtcgtttcctagtccacagtcacagtcttcttcttct 1905 |||||||||||| ||||||||||||| |||||||| || || |||||| ||| ||| Sbjct: 521 catggaaggctatcaccattcatgtcatttcctagcccgcaatcacagccttattcc--- 577 Query: 1906 ccatctagttgctttttccaacaaggtttcagcaccatgtctgttctcaaaaatcaacac 1965 || ||| ||||||| ||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 578 ccgtctgcttgctttgtccaacatggtttcagcaccatgtcttatctcagaaatcaacat 637 Query: 1966 gaaacacctaccatctgtaggcaggaacatctcagctcttactacatgatgtctggctgc 2025 || || ||||| | ||||||||||| || ||||| ||||||||||||||||||| ||| Sbjct: 638 gagacgcctacagtatgtaggcaggagcacctcagttcttactacatgatgtctgagtgc 697 Query: 2026 tcgccttattctggtgatggaaaacaatgggcaagtggagggtcaacgccatacttttct 2085 ||||||| | ||||||||||||||| | ||| |||| |||||| ||||||||||||| Sbjct: 698 tcgccttttgatggtgatggaaaacagaagacaaatggaaggtcaatgccatacttttct 757 Query: 2086 acccc 2090 ||||| Sbjct: 758 acccc 762 Score = 60.0 bits (30), Expect = 4e-05 Identities = 37/38 (97%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 2476 atggctcactccactcctgtacagtagctgttagtctc 2513 |||||||||||||| ||||||||||||||||||||||| Sbjct: 1127 atggctcactccac-cctgtacagtagctgttagtctc 1163
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete sequence Length = 134496 Score = 289 bits (146), Expect = 3e-74 Identities = 209/230 (90%) Strand = Plus / Plus Query: 1188 tgaggtctcccagttgaaaaaggaattagctgacaaggagcatcagttaagcgtaaaacc 1247 |||||| || |||||||| |||||||||||||| ||||||||||||||||| |||||||| Sbjct: 90282 tgaggtttctcagttgaagaaggaattagctgagaaggagcatcagttaagtgtaaaacc 90341 Query: 1248 tactgaaaaggctgcagataatgagctatcttggctaaatgtcttgagtcaggaaactgg 1307 ||||||||| |||||||| ||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 90342 tactgaaaaagctgcagacaatgagctatcttggctaaatatcttgagccaggaaactgg 90401 Query: 1308 tgaaaatgttcaggaacgcataaatctacagaaggcactgtttgaacttgaagaaaccaa 1367 || |||||||| |||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 90402 cgagaatgttcaagaacgcattaatctgcagaaagcactgtttgaacttgaagaaaccaa 90461 Query: 1368 caagcgtaaccggatggagctccagcatcttgacggtgcaattgcaagac 1417 ||||| || || |||||||||||||||||||| | |||||||||||||| Sbjct: 90462 taagcgcaatcgaatggagctccagcatcttgatgatgcaattgcaagac 90511 Score = 210 bits (106), Expect = 2e-50 Identities = 142/154 (92%) Strand = Plus / Plus Query: 969 cagcaaattaactcgaattctgaaggatggtctgtctggtaattctcgaactgttatgat 1028 |||||||||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| | Sbjct: 89823 cagcaaattaacacgaatcctgaaggatgggctctctggtaactctcgtactgttatggt 89882 Query: 1029 tgccacaatatcaccagctgatgatcagtatcatcacactaccaatacactcaagtatgc 1088 ||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 89883 tgctacgatatcaccagctgatgatcagtatcatcacaccaccaatacactcaagtatgc 89942 Query: 1089 ggatcgtgctaaggagataaaaacacatgtccat 1122 |||||||| |||||||||||||||||||||||| Sbjct: 89943 tgatcgtgcaaaggagataaaaacacatgtccat 89976 Score = 170 bits (86), Expect = 2e-38 Identities = 152/174 (87%) Strand = Plus / Plus Query: 1645 atgaataatgctgagcttcaaattgagatggctatgcgggaccaagtaatacataatcag 1704 |||| |||||| |||||||||||||||||||||||| |||| ||||||||| |||| ||| Sbjct: 91172 atgactaatgccgagcttcaaattgagatggctatgagggatcaagtaatatataaccag 91231 Query: 1705 agggaatctttaaggagcctatggaacattctctatagaacagggctaaatcagaaacag 1764 ||||||||| ||||||| || ||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 91232 agggaatctctaaggagtctgtggaacattatttatggaacagggctaaaccagaaacag 91291 Query: 1765 attctgaagttggctgctaagcaaggattaactgtagaaggctgtcctttgcct 1818 ||| || | ||||| |||||||| |||||| |||||||||||||||||||| Sbjct: 91292 atttctaaactagctgcgaagcaaggcttaactatagaaggctgtcctttgcct 91345 Score = 165 bits (83), Expect = 1e-36 Identities = 205/245 (83%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 1846 catggaaggctaccaccattcatgtcgtttcctagtccacagtcacagtcttcttcttct 1905 |||||||||||| ||||||||||||| |||||||| || || |||||| ||| ||| Sbjct: 91388 catggaaggctatcaccattcatgtcatttcctagcccgcaatcacagccttattcc--- 91444 Query: 1906 ccatctagttgctttttccaacaaggtttcagcaccatgtctgttctcaaaaatcaacac 1965 || ||| ||||||| ||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 91445 ccgtctgcttgctttgtccaacatggtttcagcaccatgtcttatctcagaaatcaacat 91504 Query: 1966 gaaacacctaccatctgtaggcaggaacatctcagctcttactacatgatgtctggctgc 2025 || || ||||| | ||||||||||| || ||||| ||||||||||||||||||| ||| Sbjct: 91505 gagacgcctacagtatgtaggcaggagcacctcagttcttactacatgatgtctgagtgc 91564 Query: 2026 tcgccttattctggtgatggaaaacaatgggcaagtggagggtcaacgccatacttttct 2085 ||||||| | ||||||||||||||| | ||| |||| |||||| ||||||||||||| Sbjct: 91565 tcgccttttgatggtgatggaaaacagaagacaaatggaaggtcaatgccatacttttct 91624 Query: 2086 acccc 2090 ||||| Sbjct: 91625 acccc 91629 Score = 155 bits (78), Expect = 1e-33 Identities = 132/150 (88%) Strand = Plus / Plus Query: 822 cagtgagagggctactgaaacgaacaattttggccaaaagcttagagatggagcaaacat 881 |||||||||||| ||||||| ||||| ||||| |||||||||||||||||||| ||||| Sbjct: 89598 cagtgagagggcctctgaaacaaacaactttgggcaaaagcttagagatggagccaacat 89657 Query: 882 taataagtcactcctagcgttagcaaattgcatcaatgccctcggcaagcaaaataagaa 941 ||| ||||| |||||| |||| || |||||||||||||| ||||||||||| ||||| Sbjct: 89658 taaccgttcacttctagcgctagcgaactgcatcaatgcccttggcaagcaaaacaagaa 89717 Query: 942 aggtctagcatatgttccatatcgcaacag 971 |||||| ||||||||||||||||| ||||| Sbjct: 89718 aggtcttgcatatgttccatatcgaaacag 89747 Score = 123 bits (62), Expect = 4e-24 Identities = 80/86 (93%) Strand = Plus / Plus Query: 637 tcagcagataagatccttgaactcttgaacataggcaacagcagacgcaagacagagagc 696 |||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 89049 tcagcagataagattcttgaactcttgaacataggcaacagtcggcgcaagacagagagc 89108 Query: 697 acggaagcaaacgcaacttcttcacg 722 || ||||||||| ||||||||||||| Sbjct: 89109 acagaagcaaactcaacttcttcacg 89134 Score = 121 bits (61), Expect = 1e-23 Identities = 127/149 (85%) Strand = Plus / Plus Query: 388 agtggcaaaacatatacgatggttggaagcaggaatgatcctggtcttatggttcttagc 447 ||||| ||||| ||||| |||||||||| | | ||||||||||||||||||||| ||| Sbjct: 88224 agtgggaaaacttatacaatggttggaacccatagtgatcctggtcttatggttctgagc 88283 Query: 448 ttccgcacaatctttgatcaaataaaaaaggatgatagttcagatacatttgaagtctca 507 || |||||||||||||||| |||| |||||||| ||| |||||| ||||| |||||| Sbjct: 88284 tttcgcacaatctttgatctggtaaagaaggatgacagtaaagatacgtttgaggtctca 88343 Query: 508 tgttcatacctggaagtatacaatgaggt 536 |||||||| || ||||| ||||||||||| Sbjct: 88344 tgttcatatcttgaagtgtacaatgaggt 88372 Score = 119 bits (60), Expect = 5e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 533 aggttatctatgatttgcttgagaaatcctcgggtcacctagagcttcgtgaggatcccg 592 |||||||||||||||||||||| ||||| || |||||||| ||||||||||| ||||| | Sbjct: 88475 aggttatctatgatttgcttgaaaaatcgtcaggtcacctggagcttcgtgaagatcctg 88534 Query: 593 agcatggcataatagttgctggtttaagaagaattaaggt 632 |||||| ||||| ||||||||||||||||| |||||||| Sbjct: 88535 tgcatggtataatggttgctggtttaagaagcattaaggt 88574 Score = 117 bits (59), Expect = 2e-22 Identities = 101/115 (87%) Strand = Plus / Plus Query: 1526 aggatattgaactgaatgagagtcgtaggcgccaactccaagatatgatcgaggaagcta 1585 ||||||||||||||||||||||||| | || |||||||||||||||||||||||||| | Sbjct: 90971 aggatattgaactgaatgagagtcgcaaacgtcaactccaagatatgatcgaggaagcca 91030 Query: 1586 ctagtaacaatgggaacaggacttaccttcagattctcagccaatacaggcttct 1640 | ||||||||||| ||||| || ||||| || |||||||| || ||||| ||||| Sbjct: 91031 ccagtaacaatggcaacagaacctacctccacattctcagtcagtacagacttct 91085 Score = 109 bits (55), Expect = 5e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 1450 caagccttaacatcaaggaggcaagttattcttgacaacatccgtgacaatgacgaagct 1509 ||||| ||||||||| |||| |||||||||||||||||||| || |||||||| |||||| Sbjct: 90818 caagcattaacatcacggagacaagttattcttgacaacatacgcgacaatgatgaagct 90877 Query: 1510 ggtgctggctacagaaagg 1528 ||||||||||||||||||| Sbjct: 90878 ggtgctggctacagaaagg 90896 Score = 89.7 bits (45), Expect = 5e-14 Identities = 87/101 (86%) Strand = Plus / Plus Query: 724 tcacacgctgtactggagattactgtaagacgcaagcagaaaggaaaatatggtagtcaa 783 ||||| ||||| |||||||| ||||| | || || || |||||| ||||||||||||| Sbjct: 89407 tcacatgctgtcctggagataactgtgaagcgaaaacaaaaaggacaatatggtagtcag 89466 Query: 784 gttcttcgtggaaagcttgccttggttgatctggcgggcag 824 |||||||||||||||||||| |||||||| || |||||||| Sbjct: 89467 gttcttcgtggaaagcttgcgttggttgaccttgcgggcag 89507 Score = 81.8 bits (41), Expect = 1e-11 Identities = 86/101 (85%) Strand = Plus / Plus Query: 200 tggaccctgatgtctccaagggctacctcgacctcatccaaaaccggaccaaggagaaga 259 ||||||||||| | ||||||| |||||| || |||||||||||| |||||||||||| | Sbjct: 85944 tggaccctgatctgtccaaggactaccttgaactcatccaaaacaggaccaaggagagaa 86003 Query: 260 gatatagcttcgatcacgtttacgcacctggatgctccaat 300 |||| ||||||||||| || || || || || ||||||||| Sbjct: 86004 gatacagcttcgatcatgtgtatgcgcccgggtgctccaat 86044 Score = 79.8 bits (40), Expect = 5e-11 Identities = 73/84 (86%) Strand = Plus / Plus Query: 103 ctgcaggtggccgtcaagtgcaggccgctgaccgacaacgagagccggcgctcgcggcac 162 ||||||||||| || ||||||||||| ||||| |||| |||| ||||| |||||||| Sbjct: 85736 ctgcaggtggctgtgaagtgcaggccactgacagacagcgagcagcggcgttcgcggcat 85795 Query: 163 atcatacaagtcattgacgataag 186 ||||||||||||||||| |||||| Sbjct: 85796 atcatacaagtcattgatgataag 85819 Score = 77.8 bits (39), Expect = 2e-10 Identities = 75/87 (86%) Strand = Plus / Plus Query: 303 ggatgtttataagaatatctctcccacagttttgggtgtagttcaaggtcttaatgtgac 362 |||||| ||||||||||| ||| | ||| || |||||||||||||| ||||||| ||| Sbjct: 87446 ggatgtatataagaatatatcttctacaattgctggtgtagttcaaggccttaatgcgac 87505 Query: 363 agtctttgcctatggctctactggaag 389 ||||||||| ||||| ||||||||||| Sbjct: 87506 agtctttgcttatggttctactggaag 87532 Score = 65.9 bits (33), Expect = 7e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 58 gcaatgcccaccatccgggctccggcttccaggcagacggccacgctgcaggt 110 |||||||| | |||||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 85565 gcaatgccgagcatccgagctccggcttccaagcagacggccacgctacaggt 85617 Score = 60.0 bits (30), Expect = 4e-05 Identities = 37/38 (97%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 2476 atggctcactccactcctgtacagtagctgttagtctc 2513 |||||||||||||| ||||||||||||||||||||||| Sbjct: 92235 atggctcactccac-cctgtacagtagctgttagtctc 92271 Score = 48.1 bits (24), Expect = 0.17 Identities = 36/40 (90%) Strand = Plus / Plus Query: 1147 catgttgaagactaccagaggatgatagagaatctccagg 1186 ||||||||||||||| | |||||||| || |||||||||| Sbjct: 90152 catgttgaagactacaaaaggatgattgacaatctccagg 90191
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 289 bits (146), Expect = 3e-74 Identities = 209/230 (90%) Strand = Plus / Plus Query: 1188 tgaggtctcccagttgaaaaaggaattagctgacaaggagcatcagttaagcgtaaaacc 1247 |||||| || |||||||| |||||||||||||| ||||||||||||||||| |||||||| Sbjct: 31855572 tgaggtttctcagttgaagaaggaattagctgagaaggagcatcagttaagtgtaaaacc 31855631 Query: 1248 tactgaaaaggctgcagataatgagctatcttggctaaatgtcttgagtcaggaaactgg 1307 ||||||||| |||||||| ||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 31855632 tactgaaaaagctgcagacaatgagctatcttggctaaatatcttgagccaggaaactgg 31855691 Query: 1308 tgaaaatgttcaggaacgcataaatctacagaaggcactgtttgaacttgaagaaaccaa 1367 || |||||||| |||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 31855692 cgagaatgttcaagaacgcattaatctgcagaaagcactgtttgaacttgaagaaaccaa 31855751 Query: 1368 caagcgtaaccggatggagctccagcatcttgacggtgcaattgcaagac 1417 ||||| || || |||||||||||||||||||| | |||||||||||||| Sbjct: 31855752 taagcgcaatcgaatggagctccagcatcttgatgatgcaattgcaagac 31855801 Score = 210 bits (106), Expect = 2e-50 Identities = 142/154 (92%) Strand = Plus / Plus Query: 969 cagcaaattaactcgaattctgaaggatggtctgtctggtaattctcgaactgttatgat 1028 |||||||||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| | Sbjct: 31855113 cagcaaattaacacgaatcctgaaggatgggctctctggtaactctcgtactgttatggt 31855172 Query: 1029 tgccacaatatcaccagctgatgatcagtatcatcacactaccaatacactcaagtatgc 1088 ||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 31855173 tgctacgatatcaccagctgatgatcagtatcatcacaccaccaatacactcaagtatgc 31855232 Query: 1089 ggatcgtgctaaggagataaaaacacatgtccat 1122 |||||||| |||||||||||||||||||||||| Sbjct: 31855233 tgatcgtgcaaaggagataaaaacacatgtccat 31855266 Score = 170 bits (86), Expect = 2e-38 Identities = 152/174 (87%) Strand = Plus / Plus Query: 1645 atgaataatgctgagcttcaaattgagatggctatgcgggaccaagtaatacataatcag 1704 |||| |||||| |||||||||||||||||||||||| |||| ||||||||| |||| ||| Sbjct: 31856462 atgactaatgccgagcttcaaattgagatggctatgagggatcaagtaatatataaccag 31856521 Query: 1705 agggaatctttaaggagcctatggaacattctctatagaacagggctaaatcagaaacag 1764 ||||||||| ||||||| || ||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 31856522 agggaatctctaaggagtctgtggaacattatttatggaacagggctaaaccagaaacag 31856581 Query: 1765 attctgaagttggctgctaagcaaggattaactgtagaaggctgtcctttgcct 1818 ||| || | ||||| |||||||| |||||| |||||||||||||||||||| Sbjct: 31856582 atttctaaactagctgcgaagcaaggcttaactatagaaggctgtcctttgcct 31856635 Score = 165 bits (83), Expect = 1e-36 Identities = 205/245 (83%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 1846 catggaaggctaccaccattcatgtcgtttcctagtccacagtcacagtcttcttcttct 1905 |||||||||||| ||||||||||||| |||||||| || || |||||| ||| ||| Sbjct: 31856678 catggaaggctatcaccattcatgtcatttcctagcccgcaatcacagccttattcc--- 31856734 Query: 1906 ccatctagttgctttttccaacaaggtttcagcaccatgtctgttctcaaaaatcaacac 1965 || ||| ||||||| ||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 31856735 ccgtctgcttgctttgtccaacatggtttcagcaccatgtcttatctcagaaatcaacat 31856794 Query: 1966 gaaacacctaccatctgtaggcaggaacatctcagctcttactacatgatgtctggctgc 2025 || || ||||| | ||||||||||| || ||||| ||||||||||||||||||| ||| Sbjct: 31856795 gagacgcctacagtatgtaggcaggagcacctcagttcttactacatgatgtctgagtgc 31856854 Query: 2026 tcgccttattctggtgatggaaaacaatgggcaagtggagggtcaacgccatacttttct 2085 ||||||| | ||||||||||||||| | ||| |||| |||||| ||||||||||||| Sbjct: 31856855 tcgccttttgatggtgatggaaaacagaagacaaatggaaggtcaatgccatacttttct 31856914 Query: 2086 acccc 2090 ||||| Sbjct: 31856915 acccc 31856919 Score = 155 bits (78), Expect = 1e-33 Identities = 132/150 (88%) Strand = Plus / Plus Query: 822 cagtgagagggctactgaaacgaacaattttggccaaaagcttagagatggagcaaacat 881 |||||||||||| ||||||| ||||| ||||| |||||||||||||||||||| ||||| Sbjct: 31854888 cagtgagagggcctctgaaacaaacaactttgggcaaaagcttagagatggagccaacat 31854947 Query: 882 taataagtcactcctagcgttagcaaattgcatcaatgccctcggcaagcaaaataagaa 941 ||| ||||| |||||| |||| || |||||||||||||| ||||||||||| ||||| Sbjct: 31854948 taaccgttcacttctagcgctagcgaactgcatcaatgcccttggcaagcaaaacaagaa 31855007 Query: 942 aggtctagcatatgttccatatcgcaacag 971 |||||| ||||||||||||||||| ||||| Sbjct: 31855008 aggtcttgcatatgttccatatcgaaacag 31855037 Score = 123 bits (62), Expect = 4e-24 Identities = 80/86 (93%) Strand = Plus / Plus Query: 637 tcagcagataagatccttgaactcttgaacataggcaacagcagacgcaagacagagagc 696 |||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 31854339 tcagcagataagattcttgaactcttgaacataggcaacagtcggcgcaagacagagagc 31854398 Query: 697 acggaagcaaacgcaacttcttcacg 722 || ||||||||| ||||||||||||| Sbjct: 31854399 acagaagcaaactcaacttcttcacg 31854424 Score = 121 bits (61), Expect = 1e-23 Identities = 127/149 (85%) Strand = Plus / Plus Query: 388 agtggcaaaacatatacgatggttggaagcaggaatgatcctggtcttatggttcttagc 447 ||||| ||||| ||||| |||||||||| | | ||||||||||||||||||||| ||| Sbjct: 31853514 agtgggaaaacttatacaatggttggaacccatagtgatcctggtcttatggttctgagc 31853573 Query: 448 ttccgcacaatctttgatcaaataaaaaaggatgatagttcagatacatttgaagtctca 507 || |||||||||||||||| |||| |||||||| ||| |||||| ||||| |||||| Sbjct: 31853574 tttcgcacaatctttgatctggtaaagaaggatgacagtaaagatacgtttgaggtctca 31853633 Query: 508 tgttcatacctggaagtatacaatgaggt 536 |||||||| || ||||| ||||||||||| Sbjct: 31853634 tgttcatatcttgaagtgtacaatgaggt 31853662 Score = 119 bits (60), Expect = 5e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 533 aggttatctatgatttgcttgagaaatcctcgggtcacctagagcttcgtgaggatcccg 592 |||||||||||||||||||||| ||||| || |||||||| ||||||||||| ||||| | Sbjct: 31853765 aggttatctatgatttgcttgaaaaatcgtcaggtcacctggagcttcgtgaagatcctg 31853824 Query: 593 agcatggcataatagttgctggtttaagaagaattaaggt 632 |||||| ||||| ||||||||||||||||| |||||||| Sbjct: 31853825 tgcatggtataatggttgctggtttaagaagcattaaggt 31853864 Score = 117 bits (59), Expect = 2e-22 Identities = 101/115 (87%) Strand = Plus / Plus Query: 1526 aggatattgaactgaatgagagtcgtaggcgccaactccaagatatgatcgaggaagcta 1585 ||||||||||||||||||||||||| | || |||||||||||||||||||||||||| | Sbjct: 31856261 aggatattgaactgaatgagagtcgcaaacgtcaactccaagatatgatcgaggaagcca 31856320 Query: 1586 ctagtaacaatgggaacaggacttaccttcagattctcagccaatacaggcttct 1640 | ||||||||||| ||||| || ||||| || |||||||| || ||||| ||||| Sbjct: 31856321 ccagtaacaatggcaacagaacctacctccacattctcagtcagtacagacttct 31856375 Score = 109 bits (55), Expect = 5e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 1450 caagccttaacatcaaggaggcaagttattcttgacaacatccgtgacaatgacgaagct 1509 ||||| ||||||||| |||| |||||||||||||||||||| || |||||||| |||||| Sbjct: 31856108 caagcattaacatcacggagacaagttattcttgacaacatacgcgacaatgatgaagct 31856167 Query: 1510 ggtgctggctacagaaagg 1528 ||||||||||||||||||| Sbjct: 31856168 ggtgctggctacagaaagg 31856186 Score = 89.7 bits (45), Expect = 5e-14 Identities = 87/101 (86%) Strand = Plus / Plus Query: 724 tcacacgctgtactggagattactgtaagacgcaagcagaaaggaaaatatggtagtcaa 783 ||||| ||||| |||||||| ||||| | || || || |||||| ||||||||||||| Sbjct: 31854697 tcacatgctgtcctggagataactgtgaagcgaaaacaaaaaggacaatatggtagtcag 31854756 Query: 784 gttcttcgtggaaagcttgccttggttgatctggcgggcag 824 |||||||||||||||||||| |||||||| || |||||||| Sbjct: 31854757 gttcttcgtggaaagcttgcgttggttgaccttgcgggcag 31854797 Score = 81.8 bits (41), Expect = 1e-11 Identities = 86/101 (85%) Strand = Plus / Plus Query: 200 tggaccctgatgtctccaagggctacctcgacctcatccaaaaccggaccaaggagaaga 259 ||||||||||| | ||||||| |||||| || |||||||||||| |||||||||||| | Sbjct: 31851234 tggaccctgatctgtccaaggactaccttgaactcatccaaaacaggaccaaggagagaa 31851293 Query: 260 gatatagcttcgatcacgtttacgcacctggatgctccaat 300 |||| ||||||||||| || || || || || ||||||||| Sbjct: 31851294 gatacagcttcgatcatgtgtatgcgcccgggtgctccaat 31851334 Score = 79.8 bits (40), Expect = 5e-11 Identities = 73/84 (86%) Strand = Plus / Plus Query: 103 ctgcaggtggccgtcaagtgcaggccgctgaccgacaacgagagccggcgctcgcggcac 162 ||||||||||| || ||||||||||| ||||| |||| |||| ||||| |||||||| Sbjct: 31851026 ctgcaggtggctgtgaagtgcaggccactgacagacagcgagcagcggcgttcgcggcat 31851085 Query: 163 atcatacaagtcattgacgataag 186 ||||||||||||||||| |||||| Sbjct: 31851086 atcatacaagtcattgatgataag 31851109 Score = 77.8 bits (39), Expect = 2e-10 Identities = 75/87 (86%) Strand = Plus / Plus Query: 303 ggatgtttataagaatatctctcccacagttttgggtgtagttcaaggtcttaatgtgac 362 |||||| ||||||||||| ||| | ||| || |||||||||||||| ||||||| ||| Sbjct: 31852736 ggatgtatataagaatatatcttctacaattgctggtgtagttcaaggccttaatgcgac 31852795 Query: 363 agtctttgcctatggctctactggaag 389 ||||||||| ||||| ||||||||||| Sbjct: 31852796 agtctttgcttatggttctactggaag 31852822 Score = 65.9 bits (33), Expect = 7e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 58 gcaatgcccaccatccgggctccggcttccaggcagacggccacgctgcaggt 110 |||||||| | |||||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 31850855 gcaatgccgagcatccgagctccggcttccaagcagacggccacgctacaggt 31850907 Score = 60.0 bits (30), Expect = 4e-05 Identities = 37/38 (97%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 2476 atggctcactccactcctgtacagtagctgttagtctc 2513 |||||||||||||| ||||||||||||||||||||||| Sbjct: 31857525 atggctcactccac-cctgtacagtagctgttagtctc 31857561 Score = 48.1 bits (24), Expect = 0.17 Identities = 36/40 (90%) Strand = Plus / Plus Query: 1147 catgttgaagactaccagaggatgatagagaatctccagg 1186 ||||||||||||||| | |||||||| || |||||||||| Sbjct: 31855442 catgttgaagactacaaaaggatgattgacaatctccagg 31855481
>dbj|AK228951.1| Arabidopsis thaliana mRNA for kinesin like protein, complete cds, clone: RAFL16-26-A20 Length = 3011 Score = 77.8 bits (39), Expect = 2e-10 Identities = 51/55 (92%) Strand = Plus / Plus Query: 361 acagtctttgcctatggctctactggaagtggcaaaacatatacgatggttggaa 415 ||||| ||||||||||| || ||||||||||||||||||||||| |||||||||| Sbjct: 602 acagtttttgcctatggttccactggaagtggcaaaacatatacaatggttggaa 656 Score = 52.0 bits (26), Expect = 0.011 Identities = 218/282 (77%) Strand = Plus / Plus Query: 868 gatggagcaaacattaataagtcactcctagcgttagcaaattgcatcaatgccctcggc 927 ||||||||||| || ||| |||||||| || ||||||||||||| ||||| | || Sbjct: 1103 gatggagcaaatatcaatcgctcactccttgcactagcaaattgcataaatgctttgggg 1162 Query: 928 aagcaaaataagaaaggtctagcatatgttccatatcgcaacagcaaattaactcgaatt 987 |||||| | || || ||||| || ||||| ||||| || ||||||||| | || || ||| Sbjct: 1163 aagcaacacaaaaagggtcttgcttatgtaccataccgaaacagcaaacttacgcggatt 1222 Query: 988 ctgaaggatggtctgtctggtaattctcgaactgttatgattgccacaatatcaccagct 1047 || || ||||||||| ||| || || | || || ||| |||| || |||||||| ||| Sbjct: 1223 ctcaaagatggtctgagtgggaactcccagacagtgatggttgcaactatatcacctgct 1282 Query: 1048 gatgatcagtatcatcacactaccaatacactcaagtatgcggatcgtgctaaggagata 1107 ||| |||||||||||| ||| || ||| | || ||||| || || || || ||||| Sbjct: 1283 gatagtcagtatcatcatactgtaaacacattgaaatatgctgaccgagcaaaagagatt 1342 Query: 1108 aaaacacatgtccataaaaatattggaacgatcgataatcat 1149 || ||||| |||| ||||||||||| || ||||||| |||| Sbjct: 1343 aagacacacatccagaaaaatattggtaccatcgatactcat 1384
>ref|NM_114825.1| Arabidopsis thaliana ATP binding / microtubule motor (AT3G49650) mRNA, complete cds Length = 2442 Score = 77.8 bits (39), Expect = 2e-10 Identities = 51/55 (92%) Strand = Plus / Plus Query: 361 acagtctttgcctatggctctactggaagtggcaaaacatatacgatggttggaa 415 ||||| ||||||||||| || ||||||||||||||||||||||| |||||||||| Sbjct: 295 acagtttttgcctatggttccactggaagtggcaaaacatatacaatggttggaa 349 Score = 52.0 bits (26), Expect = 0.011 Identities = 218/282 (77%) Strand = Plus / Plus Query: 868 gatggagcaaacattaataagtcactcctagcgttagcaaattgcatcaatgccctcggc 927 ||||||||||| || ||| |||||||| || ||||||||||||| ||||| | || Sbjct: 796 gatggagcaaatatcaatcgctcactccttgcactagcaaattgcataaatgctttgggg 855 Query: 928 aagcaaaataagaaaggtctagcatatgttccatatcgcaacagcaaattaactcgaatt 987 |||||| | || || ||||| || ||||| ||||| || ||||||||| | || || ||| Sbjct: 856 aagcaacacaaaaagggtcttgcttatgtaccataccgaaacagcaaacttacgcggatt 915 Query: 988 ctgaaggatggtctgtctggtaattctcgaactgttatgattgccacaatatcaccagct 1047 || || ||||||||| ||| || || | || || ||| |||| || |||||||| ||| Sbjct: 916 ctcaaagatggtctgagtgggaactcccagacagtgatggttgcaactatatcacctgct 975 Query: 1048 gatgatcagtatcatcacactaccaatacactcaagtatgcggatcgtgctaaggagata 1107 ||| |||||||||||| ||| || ||| | || ||||| || || || || ||||| Sbjct: 976 gatagtcagtatcatcatactgtaaacacattgaaatatgctgaccgagcaaaagagatt 1035 Query: 1108 aaaacacatgtccataaaaatattggaacgatcgataatcat 1149 || ||||| |||| ||||||||||| || ||||||| |||| Sbjct: 1036 aagacacacatccagaaaaatattggtaccatcgatactcat 1077
>gb|BT008457.1| Arabidopsis thaliana At3g49650 gene, complete cds Length = 1122 Score = 77.8 bits (39), Expect = 2e-10 Identities = 51/55 (92%) Strand = Plus / Plus Query: 361 acagtctttgcctatggctctactggaagtggcaaaacatatacgatggttggaa 415 ||||| ||||||||||| || ||||||||||||||||||||||| |||||||||| Sbjct: 295 acagtttttgcctatggttccactggaagtggcaaaacatatacaatggttggaa 349 Score = 52.0 bits (26), Expect = 0.011 Identities = 218/282 (77%) Strand = Plus / Plus Query: 868 gatggagcaaacattaataagtcactcctagcgttagcaaattgcatcaatgccctcggc 927 ||||||||||| || ||| |||||||| || ||||||||||||| ||||| | || Sbjct: 796 gatggagcaaatatcaatcgctcactccttgcactagcaaattgcataaatgctttgggg 855 Query: 928 aagcaaaataagaaaggtctagcatatgttccatatcgcaacagcaaattaactcgaatt 987 |||||| | || || ||||| || ||||| ||||| || ||||||||| | || || ||| Sbjct: 856 aagcaacacaaaaagggtcttgcttatgtaccataccgaaacagcaaacttacgcggatt 915 Query: 988 ctgaaggatggtctgtctggtaattctcgaactgttatgattgccacaatatcaccagct 1047 || || ||||||||| ||| || || | || || ||| |||| || |||||||| ||| Sbjct: 916 ctcaaagatggtctgagtgggaactcccagacagtgatggttgcaactatatcacctgct 975 Query: 1048 gatgatcagtatcatcacactaccaatacactcaagtatgcggatcgtgctaaggagata 1107 ||| |||||||||||| ||| || ||| | || ||||| || || || || ||||| Sbjct: 976 gatagtcagtatcatcatactgtaaacacattgaaatatgctgaccgagcaaaagagatt 1035 Query: 1108 aaaacacatgtccataaaaatattggaacgatcgataatcat 1149 || ||||| |||| ||||||||||| || ||||||| |||| Sbjct: 1036 aagacacacatccagaaaaatattggtaccatcgatactcat 1077
>gb|AY120758.1| Arabidopsis thaliana kinesin-like protein (At3g49650) mRNA, complete cds Length = 3039 Score = 77.8 bits (39), Expect = 2e-10 Identities = 51/55 (92%) Strand = Plus / Plus Query: 361 acagtctttgcctatggctctactggaagtggcaaaacatatacgatggttggaa 415 ||||| ||||||||||| || ||||||||||||||||||||||| |||||||||| Sbjct: 559 acagtttttgcctatggttccactggaagtggcaaaacatatacaatggttggaa 613 Score = 52.0 bits (26), Expect = 0.011 Identities = 218/282 (77%) Strand = Plus / Plus Query: 868 gatggagcaaacattaataagtcactcctagcgttagcaaattgcatcaatgccctcggc 927 ||||||||||| || ||| |||||||| || ||||||||||||| ||||| | || Sbjct: 1060 gatggagcaaatatcaatcgctcactccttgcactagcaaattgcataaatgctttgggg 1119 Query: 928 aagcaaaataagaaaggtctagcatatgttccatatcgcaacagcaaattaactcgaatt 987 |||||| | || || ||||| || ||||| ||||| || ||||||||| | || || ||| Sbjct: 1120 aagcaacacaaaaagggtcttgcttatgtaccataccgaaacagcaaacttacgcggatt 1179 Query: 988 ctgaaggatggtctgtctggtaattctcgaactgttatgattgccacaatatcaccagct 1047 || || ||||||||| ||| || || | || || ||| |||| || |||||||| ||| Sbjct: 1180 ctcaaagatggtctgagtgggaactcccagacagtgatggttgcaactatatcacctgct 1239 Query: 1048 gatgatcagtatcatcacactaccaatacactcaagtatgcggatcgtgctaaggagata 1107 ||| |||||||||||| ||| || ||| | || ||||| || || || || ||||| Sbjct: 1240 gatagtcagtatcatcatactgtaaacacattgaaatatgctgaccgagcaaaagagatt 1299 Query: 1108 aaaacacatgtccataaaaatattggaacgatcgataatcat 1149 || ||||| |||| ||||||||||| || ||||||| |||| Sbjct: 1300 aagacacacatccagaaaaatattggtaccatcgatactcat 1341
>emb|AL132964.2|ATT9C5 Arabidopsis thaliana DNA chromosome 3, BAC clone T9C5 Length = 104204 Score = 48.1 bits (24), Expect = 0.17 Identities = 27/28 (96%) Strand = Plus / Minus Query: 388 agtggcaaaacatatacgatggttggaa 415 ||||||||||||||||| |||||||||| Sbjct: 84271 agtggcaaaacatatacaatggttggaa 84244
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 46.1 bits (23), Expect = 0.66 Identities = 23/23 (100%) Strand = Plus / Minus Query: 811 gatctggcgggcagtgagagggc 833 ||||||||||||||||||||||| Sbjct: 9359069 gatctggcgggcagtgagagggc 9359047
>gb|DQ167777.1| Drosophila teissieri putative pavarotti (pav) gene, exons 3 through 6 and partial cds Length = 1852 Score = 46.1 bits (23), Expect = 0.66 Identities = 23/23 (100%) Strand = Plus / Plus Query: 806 tggttgatctggcgggcagtgag 828 ||||||||||||||||||||||| Sbjct: 142 tggttgatctggcgggcagtgag 164
>ref|NM_079268.2| Drosophila melanogaster Kinesin-like protein at 67A CG10923-RA (Klp67A), mRNA Length = 2893 Score = 46.1 bits (23), Expect = 0.66 Identities = 23/23 (100%) Strand = Plus / Plus Query: 811 gatctggcgggcagtgagagggc 833 ||||||||||||||||||||||| Sbjct: 905 gatctggcgggcagtgagagggc 927
>gb|AC010028.8| Drosophila melanogaster 3L BAC RP98-1E20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187489 Score = 46.1 bits (23), Expect = 0.66 Identities = 23/23 (100%) Strand = Plus / Minus Query: 811 gatctggcgggcagtgagagggc 833 ||||||||||||||||||||||| Sbjct: 65093 gatctggcgggcagtgagagggc 65071
>gb|AC091203.3| Drosophila melanogaster 3L BAC RP98-48N8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 176929 Score = 46.1 bits (23), Expect = 0.66 Identities = 23/23 (100%) Strand = Plus / Minus Query: 811 gatctggcgggcagtgagagggc 833 ||||||||||||||||||||||| Sbjct: 176325 gatctggcgggcagtgagagggc 176303
>gb|AY071433.1| Drosophila melanogaster RE52076 full length cDNA Length = 2909 Score = 46.1 bits (23), Expect = 0.66 Identities = 23/23 (100%) Strand = Plus / Plus Query: 811 gatctggcgggcagtgagagggc 833 ||||||||||||||||||||||| Sbjct: 907 gatctggcgggcagtgagagggc 929
>gb|U89264.1|DMU89264 Drosophila melanogaster kinesin like protein 67a mRNA, complete cds Length = 2963 Score = 46.1 bits (23), Expect = 0.66 Identities = 23/23 (100%) Strand = Plus / Plus Query: 811 gatctggcgggcagtgagagggc 833 ||||||||||||||||||||||| Sbjct: 892 gatctggcgggcagtgagagggc 914
>gb|AC005274.1|AC005274 Homo sapiens chromosome 17, clone hRPK.1090_M_7, complete sequence Length = 205150 Score = 46.1 bits (23), Expect = 0.66 Identities = 23/23 (100%) Strand = Plus / Minus Query: 641 cagataagatccttgaactcttg 663 ||||||||||||||||||||||| Sbjct: 40392 cagataagatccttgaactcttg 40370
>gb|M74429.1|DROKLPC D.melanogaster kinesin-like protein (KLP3) gene, partial cds Length = 354 Score = 46.1 bits (23), Expect = 0.66 Identities = 23/23 (100%) Strand = Plus / Plus Query: 811 gatctggcgggcagtgagagggc 833 ||||||||||||||||||||||| Sbjct: 91 gatctggcgggcagtgagagggc 113
>ref|NM_001045441.1| Danio rerio zgc:153650 (zgc:153650), mRNA gb|BC122362.1| Danio rerio zgc:153650, mRNA (cDNA clone MGC:153650 IMAGE:7907481), complete cds Length = 1218 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2516 ctgtagtcagtcctgctctcat 2537 |||||||||||||||||||||| Sbjct: 816 ctgtagtcagtcctgctctcat 795
>gb|AY156979.1| Zea mays nitrilase 1 (NIT1) mRNA, complete cds Length = 1784 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 ccatccgggctccggcttccag 89 |||||||||||||||||||||| Sbjct: 89 ccatccgggctccggcttccag 110
>ref|XM_814376.1| Trypanosoma cruzi strain CL Brener C-terminal motor kinesin (Tc00.1047053506211.114) partial mRNA Length = 2472 Score = 44.1 bits (22), Expect = 2.6 Identities = 43/50 (86%) Strand = Plus / Plus Query: 365 tctttgcctatggctctactggaagtggcaaaacatatacgatggttgga 414 ||||||||||||| ||||| ||||||||||||||||| |||| |||| Sbjct: 1694 tctttgcctatggacaaactgggagtggcaaaacatataccatgggtgga 1743
>ref|XM_691034.1| PREDICTED: Danio rerio similar to Kinesin-like protein KIF3B (Microtubule plus end-directed kinesin motor 3B) (LOC567733), mRNA Length = 1425 Score = 44.1 bits (22), Expect = 2.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 806 tggttgatctggcgggcagtgagagg 831 ||||||||||||| |||||||||||| Sbjct: 731 tggttgatctggcaggcagtgagagg 756 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 477,086,291 Number of extensions: 25260390 Number of successful extensions: 119457 Number of sequences better than 10.0: 23 Number of HSP's gapped: 119433 Number of HSP's successfully gapped: 72 Length of query: 2675 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2652 Effective length of database: 18,503,978,556 Effective search space: 49072551130512 Effective search space used: 49072551130512 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
