ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf32i13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK121540:Os05g0481600 109 2e-24
2AK063820:Os05g0481600 109 2e-24
3AK102618:Os01g0759400 30 1.2
4AK101442:Os01g0759400 30 1.2
5AK109061:Os05g0165500 29 2.7
6AK073285: 28 4.6

>AK121540:Os05g0481600 |
          Length = 66
 Score =  109 bits (272), Expect = 2e-24
 Identities = 48/61 (78%), Positives = 54/61 (88%)
 Frame = +2

Query: 116 RLHWLEAMLPLGIIGGFLCIMGNGQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVDKPA 295
           RLHWLEAMLPLGIIGG LCIMGN QYYIH+AAHGRPKHIGND WD+AM RRDK L+ + +
Sbjct: 3   RLHWLEAMLPLGIIGGMLCIMGNAQYYIHRAAHGRPKHIGNDNWDMAMARRDKVLLHQAS 62

Query: 296 A 298
           +
Sbjct: 63  S 63



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>AK063820:Os05g0481600 |
          Length = 66

 Score =  109 bits (272), Expect = 2e-24
 Identities = 48/61 (78%), Positives = 54/61 (88%)
 Frame = +2

Query: 116 RLHWLEAMLPLGIIGGFLCIMGNGQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVDKPA 295
           RLHWLEAMLPLGIIGG LCIMGN QYYIH+AAHGRPKHIGND WD+AM RRDK L+ + +
Sbjct: 3   RLHWLEAMLPLGIIGGMLCIMGNAQYYIHRAAHGRPKHIGNDNWDMAMARRDKVLLHQAS 62

Query: 296 A 298
           +
Sbjct: 63  S 63



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>AK102618:Os01g0759400 |
          Length = 540

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = -3

Query: 136 GLQPVQPEPSHREPDGETADGSGTATRSRFASYPAVGETG 17
           GL P  P P    P G+  DGSG+ + S   S PA   TG
Sbjct: 337 GLAPPVPPP----PQGDDPDGSGSESDSSVVSCPATLSTG 372



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>AK101442:Os01g0759400 |
          Length = 540

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = -3

Query: 136 GLQPVQPEPSHREPDGETADGSGTATRSRFASYPAVGETG 17
           GL P  P P    P G+  DGSG+ + S   S PA   TG
Sbjct: 337 GLAPPVPPP----PQGDDPDGSGSESDSSVVSCPATLSTG 372



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>AK109061:Os05g0165500 |
          Length = 227

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -3

Query: 133 LQPVQPEPSHREPDGETADGSGTATRSRFASYPAVGETGV 14
           L P+ P PS+    G+   G G ++ SR + + A G  GV
Sbjct: 71  LPPLTPPPSYYASAGKKGGGGGASSGSRRSGWSAGGARGV 110



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>AK073285: |
          Length = 361

 Score = 28.1 bits (61), Expect = 4.6
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +2

Query: 149 GIIGGFLCIMGNGQYYIHKAAHGRPKHIGNDMWDVAME 262
           GI+G  LC++G+    +H  A    + +  ++WD+A E
Sbjct: 128 GILGCILCVVGSTTIVLHAPAEREIESV-TEVWDLATE 164


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 14,207,553
Number of extensions: 287842
Number of successful extensions: 855
Number of sequences better than 10.0: 6
Number of HSP's gapped: 853
Number of HSP's successfully gapped: 6
Length of query: 198
Length of database: 15,399,855
Length adjustment: 95
Effective length of query: 103
Effective length of database: 11,595,960
Effective search space: 1194383880
Effective search space used: 1194383880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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