ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf32i13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os05g40300:12005.t03569:unspliced-genomic expressed protein 86 2e-32
2LOC_Os11g38620:12011.t03405:unspliced-genomic expressed protein 33 1.7
3LOC_Os03g06520:12003.t00519:unspliced-genomic sulfate transp... 33 1.7
4LOC_Os01g59050:12001.t05297:unspliced-genomic cytochrome P45... 33 2.3
5LOC_Os06g02580:12006.t00151:unspliced-genomic nickel ion tra... 32 3.1
6LOC_Os02g08544:12002.t00751:unspliced-genomic homeobox prote... 24 4.6
7LOC_Os09g26770:12009.t02356:unspliced-genomic expressed protein 31 5.9
8LOC_Os07g46590:12007.t04295:unspliced-genomic chromodomain-h... 31 5.9
9LOC_Os07g11890:12007.t01061:unspliced-genomic cytochrome P45... 31 5.9
10LOC_Os02g54640:12002.t05043:unspliced-genomic glutamate rece... 31 5.9
11LOC_Os01g51370:12001.t06755:unspliced-genomic expressed protein 31 6.0
12LOC_Os04g22800:12004.t02007:unspliced-genomic hypothetical p... 29 7.3
13LOC_Os01g56850:12001.t05095:unspliced-genomic expressed protein 25 7.7
14LOC_Os10g04370:12010.t00322:unspliced-genomic F-box domain c... 31 8.1
15LOC_Os07g33680:12007.t03046:unspliced-genomic succinate dehy... 31 8.1
16LOC_Os06g42430:12006.t03934:unspliced-genomic expressed protein 31 8.1
17LOC_Os04g38340:12004.t03405:unspliced-genomic serologically ... 31 8.1
18LOC_Os02g46680:12002.t04255:unspliced-genomic multidrug resi... 31 8.1
19LOC_Os02g01440:12002.t00044:unspliced-genomic nitric-oxide s... 31 8.1
20LOC_Os05g44080:12005.t03897:unspliced-genomic expressed protein 24 9.3

>LOC_Os05g40300:12005.t03569:unspliced-genomic expressed protein|
          Length = 2577
 Score = 85.8 bits (181), Expect(5) = 2e-32
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = +2 / +1

                                              
Query: 116 RLHWLEAMLPLGIIGGFLCIMGNGQYYIHKAAHGR 220
           RLHWLEAMLPLGIIGG LCIMGN QYYIH+AAHGR
Sbjct: 151 RLHWLEAMLPLGIIGGMLCIMGNAQYYIHRAAHGR 255



 Score = 45.1 bits (92), Expect(5) = 2e-32
 Identities = 16/27 (59%), Positives = 22/27 (81%)
 Frame = +2 / +2

                                      
Query: 218 RPKHIGNDMWDVAMERRDKKLVDKPAA 298
           +PKHIGND WD+AM RRDK L+ + ++
Sbjct: 374 QPKHIGNDNWDMAMARRDKVLLHQASS 454



 Score = 36.8 bits (74), Expect(5) = 2e-32
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = +1 / +2

                                 
Query: 403  GLLFLFSVSSHWMNNVYLKLI 465
            GL+FLF+   +WMNNVYL+ +
Sbjct: 2237 GLMFLFTTFEYWMNNVYLESV 2299



 Score = 29.0 bits (57), Expect(5) = 2e-32
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +3 / +1

                             
Query: 324  SFLDVDEALSEAQKYCC 374
            S LDVDE +S AQ Y C
Sbjct: 2161 SSLDVDEVISNAQNYSC 2211



 Score = 23.5 bits (45), Expect(5) = 2e-32
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3 / +2

                       
Query: 78  SAVSPSGSRWLG 113
           +A SP GSRW G
Sbjct: 119 AATSPPGSRWRG 154



 Score = 42.3 bits (86), Expect(5) = 3e-16
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = -3 / -3

                                        
Query: 307 ILVGGRLVDELLVTALHGDVPHVVPDVLR 221
           +++GG L++E LV A HG VP VVPDVLR
Sbjct: 463 VVLGGGLMEEHLVPAGHGHVPIVVPDVLR 377



 Score = 37.3 bits (75), Expect(5) = 3e-16
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = -1 / -2

                            
Query: 219 LPCAALWM*YWPLPMMQ 169
           LPCAALWM*Y   PMMQ
Sbjct: 254 LPCAALWM*YCAFPMMQ 204



 Score = 35.9 bits (72), Expect(5) = 3e-16
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = -1 / -3

                                   
Query: 453  VHIIHPMTGN*KQKQKPQFPIDT 385
            +HIIHP+  + KQK KP FP+ T
Sbjct: 2287 IHIIHPIFKSCKQKHKPSFPLYT 2219



 Score = 25.4 bits (49), Expect(5) = 3e-16
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -3 / -1

                      
Query: 148 QRQHGLQPVQP 116
           QRQH LQPV+P
Sbjct: 183 QRQHRLQPVKP 151



 Score = 22.6 bits (43), Expect(5) = 3e-16
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3 / -1

                       
Query: 115 EPSHREPDGETA 80
           +P HR+P GE A
Sbjct: 156 KPRHRDPGGEVA 121



 Score = 38.6 bits (78), Expect(2) = 0.001
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = -1 / -1

                               
Query: 279 SFLSRRSMATSHMSFPMCFG 220
           S LSRR+MA S +SFPMCFG
Sbjct: 435 STLSRRAMAMSQLSFPMCFG 376



 Score = 26.7 bits (52), Expect(2) = 0.001
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2 / -1

                               
Query: 455  RYTLFIQ*LETENRNRSPS 399
            RYTLFIQ  +  N+N SP+
Sbjct: 2289 RYTLFIQYSKVVNKNISPA 2233



 Score = 32.7 bits (65), Expect(2) = 0.004
 Identities = 15/28 (53%), Positives = 15/28 (53%)
 Frame = +2 / +3

                                        
Query: 368  LLCSFHVSMGNWGFCFCFQFPVIG*IMC 451
            LL    V  G  G CFC Q   IG*IMC
Sbjct: 2202 LLLLVSVYNGKLGLCFCLQLLNIG*IMC 2285



 Score = 26.7 bits (52), Expect(2) = 0.004
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +1 / +2

                               
Query: 325  LSWMLTKLFQKLRNTAV*F 381
            L+WML KLFQ  R T V F
Sbjct: 2162 LAWMLMKLFQMPRITPVSF 2218



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>LOC_Os11g38620:12011.t03405:unspliced-genomic expressed protein|
          Length = 4634

 Score = 33.1 bits (66), Expect = 1.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3 / +3

                                    
Query: 142 QHGLQPVQPEPSHREPDGETADGSG 68
           Q G+ P +P P HRE +GE   G G
Sbjct: 411 QRGVLPPRPGPHHREREGEGCQGEG 485



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>LOC_Os03g06520:12003.t00519:unspliced-genomic sulfate transporter 3.1, putative, expressed|
          Length = 5761

 Score = 33.1 bits (66), Expect = 1.7
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = -2 / +2

                                                         
Query: 395  PLIHGNYTAVFLSF*KSFVNIQERSIVDQYPSWRPACRRASCHGA 261
            PL +G    + L  * SF +  E++++ +   WR + RRASC+ A
Sbjct: 3203 PLYYGTEGVLVLHP*FSFASENEKTVLLEMQ*WRASFRRASCNFA 3337



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>LOC_Os01g59050:12001.t05297:unspliced-genomic cytochrome P450 94A1, putative|
          Length = 1553

 Score = 32.7 bits (65), Expect = 2.3
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = -2 / +2

                          
Query: 302 SWRPACRRASCHGAP 258
           SWR +CRR+S HGAP
Sbjct: 689 SWRGSCRRSSGHGAP 733



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>LOC_Os06g02580:12006.t00151:unspliced-genomic nickel ion transporter, putative, expressed|
          Length = 1838

 Score = 32.2 bits (64), Expect = 3.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2 / -2

                          
Query: 299  WRPACRRASCHGAP 258
            WRP CRR +C G P
Sbjct: 1171 WRPRCRRGTCQGTP 1130



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>LOC_Os02g08544:12002.t00751:unspliced-genomic homeobox protein knotted-1-like 3, putative, expressed|
          Length = 3444

 Score = 24.0 bits (46), Expect(3) = 4.6
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -1 / -3

                                  
Query: 384 WKLHSSISELLKELRQHPRKINC 316
           +K+H+   +L   +  +P K+NC
Sbjct: 637 YKVHTIAKQLKNLIADNPNKLNC 569



 Score = 24.0 bits (46), Expect(3) = 4.6
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = -2 / -2

                 
Query: 35 GGWGNWG 15
          GGWG WG
Sbjct: 62 GGWGGWG 42



 Score = 23.1 bits (44), Expect(3) = 4.6
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3 / -3

                                      
Query: 142 QHGLQPVQPEPSHREPDGETADGSGTA 62
           +HG     P PS     G+ A G  +A
Sbjct: 151 RHGAAGASPPPSPVRDSGDAATGGSSA 71



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>LOC_Os09g26770:12009.t02356:unspliced-genomic expressed protein|
          Length = 6237

 Score = 31.3 bits (62), Expect = 5.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2 / -1

                           
Query: 299  WRPACRRASCHGAPW 255
            W+P CR   CHG  W
Sbjct: 2571 WQPGCRAERCHGETW 2527



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>LOC_Os07g46590:12007.t04295:unspliced-genomic chromodomain-helicase-DNA-binding protein, putative, expressed|
          Length = 7776

 Score = 31.3 bits (62), Expect = 5.9
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = +3 / +3

                                                                  
Query: 342  EALSEAQKYCCVVSMYQWETGASVSVFSFQSLDE*CVPKVNKTKYDPLANCLPF 503
            EA  +   + CV++ ++W + +S  +  ++ + E C P  +  K  P+ N L F
Sbjct: 3873 EAF*QNNGHSCVITTHRWFSTSSTRMVIWKFVKERCYPICSSGKSAPVLNILFF 4034



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>LOC_Os07g11890:12007.t01061:unspliced-genomic cytochrome P450 71D7, putative|
          Length = 3682

 Score = 31.3 bits (62), Expect = 5.9
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -2 / +3

                            
Query: 305 PSWRPACRRASCHGAPW 255
           P W P     SC GAPW
Sbjct: 351 PGWEPGSSTTSCSGAPW 401



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>LOC_Os02g54640:12002.t05043:unspliced-genomic glutamate receptor 2.9 precursor, putative, expressed|
          Length = 6890

 Score = 31.3 bits (62), Expect = 5.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3 / +1

                                    
Query: 504  PSSNIHEQCVMFVVSIMDFYMDIL 575
            PSS+IHE CV++ V ++  Y  +L
Sbjct: 2167 PSSSIHENCVVYTVPLLLLYS*VL 2238



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>LOC_Os01g51370:12001.t06755:unspliced-genomic expressed protein|
          Length = 1909

 Score = 31.3 bits (62), Expect = 6.0
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1 / +3

                                          
Query: 364 NTAV*FPCINGKLGLLFLFSVSSHWMNNVYL 456
           N +V F C +G   L  L   S  WMN +Y+
Sbjct: 621 NVSVIFRCFSGTSNLCMLLLCSMKWMNRLYI 713



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>LOC_Os04g22800:12004.t02007:unspliced-genomic hypothetical protein|
          Length = 2495

 Score = 29.0 bits (57), Expect(2) = 7.3
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -1 / +1

                                       
Query: 294  AGLSTSFLSRRSMATSHMSFPMCFGLP 214
            A  S     RRS A S  SFP+CF  P
Sbjct: 2098 ASPSVDLCFRRSAACSCTSFPVCFAAP 2178



 Score = 22.6 bits (43), Expect(2) = 7.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2 / +2

                                 
Query: 575  KYIHIKIHNRYNKHHTLFMNI 513
            KY H + H+R+ +   LF N+
Sbjct: 1955 KYCHHRHHSRW*QPQLLFANV 2017



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>LOC_Os01g56850:12001.t05095:unspliced-genomic expressed protein|
          Length = 1848

 Score = 25.4 bits (49), Expect(2) = 7.7
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2 / +1

                    
Query: 308 YPSWRPACR 282
           YP+WRP CR
Sbjct: 763 YPAWRPWCR 789



 Score = 22.6 bits (43), Expect(2) = 7.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3 / +2

                             
Query: 148 QRQHGLQPVQPEPSHREP 95
           Q++HG+    P  +HR P
Sbjct: 914 QQRHGVPREPPRAAHRRP 967



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>LOC_Os10g04370:12010.t00322:unspliced-genomic F-box domain containing protein, expressed|
          Length = 1687

 Score = 30.9 bits (61), Expect = 8.1
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2 / +1

                            
Query: 305 PSWRPACRRASCHGAPW 255
           P  R  CRR SC G+PW
Sbjct: 598 PRCRLTCRRTSCAGSPW 648



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>LOC_Os07g33680:12007.t03046:unspliced-genomic succinate dehydrogenase subunit 3, putative, expressed|
          Length = 1796

 Score = 30.9 bits (61), Expect = 8.1
 Identities = 15/27 (55%), Positives = 16/27 (59%)
 Frame = -3 / -3

                                      
Query: 91  GETADGSGTATRSRFASYPAVGETGVA 11
           G   DG GT  R R A +PAV E GVA
Sbjct: 342 GGGGDGGGT*GRCRPAGWPAVVEAGVA 262



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>LOC_Os06g42430:12006.t03934:unspliced-genomic expressed protein|
          Length = 3369

 Score = 30.9 bits (61), Expect = 8.1
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2 / +1

                                   
Query: 482  PCKLFTLSLLEYS*TMCDVCCIY 550
            PC +F  +LL    T+C++CC++
Sbjct: 3301 PCPIFVGNLLTLDATLCNLCCMH 3369



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>LOC_Os04g38340:12004.t03405:unspliced-genomic serologically defined breast cancer antigen NY-BR-84, putative,|
            expressed
          Length = 5449

 Score = 30.9 bits (61), Expect = 8.1
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2 / +2

                                        
Query: 491  LFTLSLLEYS*TMCDVCCIYYGFLYGYT 574
            LF LS L YS*TMC +C  +     G+T
Sbjct: 4532 LFVLSNLVYS*TMCKICNFFSVSSRGHT 4615



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>LOC_Os02g46680:12002.t04255:unspliced-genomic multidrug resistance protein 2, putative, expressed|
          Length = 11127

 Score = 30.9 bits (61), Expect = 8.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2 / -1

                              
Query: 308  YPSWRPACRRASCHGAPW 255
            +P WRP CRR    G  W
Sbjct: 8142 HPCWRPPCRRVCSPGCSW 8089



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>LOC_Os02g01440:12002.t00044:unspliced-genomic nitric-oxide synthase, putative, expressed|
          Length = 4144

 Score = 30.9 bits (61), Expect = 8.1
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3 / +3

                                           
Query: 483  LANCLPFPSSNIHEQCVMFVVSIMDFYMDIL 575
            L+ C PFP+  +H   V+F+VS +  ++  L
Sbjct: 1299 LSPCKPFPTLALHN*MVVFIVSYVHLFLHFL 1391



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>LOC_Os05g44080:12005.t03897:unspliced-genomic expressed protein|
          Length = 6230

 Score = 24.4 bits (47), Expect(2) = 9.3
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +3 / +1

                       
Query: 363  KYCCVVSMYQW 395
            +YCC +S + W
Sbjct: 4543 RYCCCISFFNW 4575



 Score = 23.1 bits (44), Expect(2) = 9.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2 / +2

                       
Query: 533  DVCCIYYGFLY 565
            +VC I+YGF Y
Sbjct: 4640 EVCIIHYGFSY 4672


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 192,465,453
Number of extensions: 2675466
Number of successful extensions: 13772
Number of sequences better than 10.0: 20
Length of query: 198
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 150
Effective length of database: 52,912,542
Effective search space: 7936881300
Effective search space used: 7936881300
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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