ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf32i13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q8NGG8:OR8B3_HUMAN Olfactory receptor 8B3 - Homo sapiens (Human) 32 1.7
2Q96RD0:OR8B2_HUMAN Olfactory receptor 8B2 - Homo sapiens (Human) 31 3.0
3Q9ULL5:PRR12_HUMAN Proline-rich protein 12 - Homo sapiens (Human) 30 6.5
4Q9WU08:NDUA1_CRIGR NADH dehydrogenase [ubiquinone] 1 alpha subco... 30 6.5
5Q9NT99:LRC4B_HUMAN Leucine-rich repeat-containing protein 4B pre... 30 8.5

>Q8NGG8:OR8B3_HUMAN Olfactory receptor 8B3 - Homo sapiens (Human)|
          Length = 313
 Score = 32.0 bits (71), Expect = 1.7
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 394 GKLGLLFLFSVSSHWMNNVYLKLIKQNMIPLQIVYPFPPRIFMNNV 531
           G LGL+ LF ++SH    +Y  L   + I L     F P++ MN V
Sbjct: 41  GNLGLIILFGLNSHLHTPMYYFLFNLSFIDLCYSSVFTPKMLMNFV 86



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>Q96RD0:OR8B2_HUMAN Olfactory receptor 8B2 - Homo sapiens (Human)|
          Length = 313

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 394 GKLGLLFLFSVSSHWMNNVYLKLIKQNMIPLQIVYPFPPRIFMNNV 531
           G LGL+ LF ++SH    +Y  L   + I L     F P++ MN V
Sbjct: 41  GNLGLITLFGLNSHLHTPMYYFLFNLSFIDLCYSSVFTPKMLMNFV 86



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>Q9ULL5:PRR12_HUMAN Proline-rich protein 12 - Homo sapiens (Human)|
          Length = 1215

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
 Frame = -3

Query: 145 RQHGLQPVQPEPSHREPDGETADGSGTATRSRFASY-PAVGETGVARPN 2
           R HGL+P  P P  R  +     G+            PA G+TGV  PN
Sbjct: 34  RSHGLEPAAPSPRLRPEESLDPPGAMQELLGALEPLPPAPGDTGVGPPN 82



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>Q9WU08:NDUA1_CRIGR NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 -|
           Cricetulus griseus (Chinese hamster)
          Length = 70

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +2

Query: 125 WLEAMLPLGIIGGFLCIMGNGQYYIHKAAH-GRPKHIGNDMWDVAMERRDKKL 280
           W E +  L ++G  L I G    YIHK  + G+ K +G   +   +  RD+++
Sbjct: 2   WFEILPGLAVMGVCLVIPGVATAYIHKYTNGGKEKRVGRLRYQWYLMERDRRV 54



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>Q9NT99:LRC4B_HUMAN Leucine-rich repeat-containing protein 4B precursor - Homo sapiens|
           (Human)
          Length = 713

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -3

Query: 148 QRQHGLQPVQPEPSHREPDGETADGSGTATRSRFASYPAVGETGVARP 5
           + Q G + +QP  + +EP G T DG     R   A+ PA   T    P
Sbjct: 496 ETQPGEEALQPRGTEKEPPGPTTDGVWGGGRPGDAAGPASSSTTAPAP 543


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 88,002,702
Number of extensions: 1742730
Number of successful extensions: 4416
Number of sequences better than 10.0: 5
Number of HSP's gapped: 4416
Number of HSP's successfully gapped: 5
Length of query: 198
Length of database: 100,686,439
Length adjustment: 107
Effective length of query: 91
Effective length of database: 71,336,874
Effective search space: 6491655534
Effective search space used: 6491655534
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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