ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf35j13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF543426.1| Leymus cinereus putative serine/threonine phosphatase (PRC140) gene, partial cds Length = 1146 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%) Strand = Plus / Plus Query: 163 ggttcgttgtgaacaaccgagggacatggcgagtgcagggctccttggcagtgtcaagag 222 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 903 ggttcgttgtgaacaaccgagggacatggcgggtgcagggctccttggcagtgtcaagag 962 Query: 223 gcatcggtgatgcacacctcaagcaatgggtggtggctgatccagataccaggacactcc 282 ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 963 gcatcggtgatgcacaccttaagcagtgggtggtggctgatccagataccaggacactcc 1022 Query: 283 ttgttgacccacagtgcgaattcttggtacttgcctctgatggcttgtgggataaggtgg 342 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1023 ttgttgacccacagtgcgaattcttagtacttgcctctgatggcttgtgggataaggtgg 1082 Query: 343 ataaccaggaagccatagacatagccaggcctctctgcatcggcaatgacaaggcttcta 402 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1083 ataaccaggaagccatagacatcgccaggcctctctgcatcggcaatgacaaggcttctc 1142 Query: 403 gcat 406 |||| Sbjct: 1143 gcat 1146 Score = 238 bits (120), Expect = 3e-59 Identities = 141/148 (95%) Strand = Plus / Plus Query: 13 gtcactgcattgatccagaagggcggcctcaccgtgtccaacactggagattgccgtgct 72 |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 439 gtcactgcattgctccagaagggtggcctcaccgtgtccaacactggagattgccgtgct 498 Query: 73 gtcctcagccgggcaggaacggcggaggcacttacctctgatcaccgggcctcccgtgag 132 |||||||||||| |||||||||||| | |||| |||||||||||||||||||||||||| Sbjct: 499 gtcctcagccggtcaggaacggcggcgacactcacctctgatcaccgggcctcccgtgaa 558 Query: 133 gatgagagggaaagaattgagaacctgg 160 |||||||||||||||||||||||||||| Sbjct: 559 gatgagagggaaagaattgagaacctgg 586
>gb|AF543425.1| Leymus triticoides putative serine/threonine phosphatase (PRC140) gene, partial cds Length = 1104 Score = 428 bits (216), Expect = e-116 Identities = 237/244 (97%) Strand = Plus / Plus Query: 163 ggttcgttgtgaacaaccgagggacatggcgagtgcagggctccttggcagtgtcaagag 222 ||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 861 ggttcattgtgaacaaccgagggacatggcgggtgcaggactccttggcagtgtcaagag 920 Query: 223 gcatcggtgatgcacacctcaagcaatgggtggtggctgatccagataccaggacactcc 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 921 gcatcggtgatgcacacctcaagcaatgggtggtggctgatccagataccaggacactcc 980 Query: 283 ttgttgacccacagtgcgaattcttggtacttgcctctgatggcttgtgggataaggtgg 342 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 981 ttgttgatccacagtgcgaattcttagtacttgcctctgatggcttgtgggataaggtgg 1040 Query: 343 ataaccaggaagccatagacatagccaggcctctctgcatcggcaatgacaaggcttcta 402 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1041 ataaccaggaagccatagacatcgccaggcctctctgcatcggcaatgacaaggcttctc 1100 Query: 403 gcat 406 |||| Sbjct: 1101 gcat 1104 Score = 246 bits (124), Expect = 1e-61 Identities = 151/160 (94%) Strand = Plus / Plus Query: 1 ggagcttgctgcgtcactgcattgatccagaagggcggcctcaccgtgtccaacactgga 60 ||||| ||||||||| | |||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 419 ggagcatgctgcgtcgcggcattgctccagaagggcggcctcactgtgtccaacactgga 478 Query: 61 gattgccgtgctgtcctcagccgggcaggaacggcggaggcacttacctctgatcaccgg 120 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 479 gattgccgtgctgtcctcagccgggcaggaacggcggaggcactcgcctctgatcaccgg 538 Query: 121 gcctcccgtgaggatgagagggaaagaattgagaacctgg 160 |||||| |||| |||||||||||||||||||||||||||| Sbjct: 539 gcctcctgtgaagatgagagggaaagaattgagaacctgg 578
>ref|NM_001056337.1| Oryza sativa (japonica cultivar-group) Os03g0292100 (Os03g0292100) mRNA, complete cds Length = 1176 Score = 327 bits (165), Expect = 4e-86 Identities = 361/425 (84%), Gaps = 1/425 (0%) Strand = Plus / Plus Query: 58 ggagattgccgtgctgtcctcagccgggcaggaacggcggaggcacttacctctgatcac 117 |||||||||||||| || |||||||| || || | ||| ||||| || |||||||||||| Sbjct: 730 ggagattgccgtgccgtgctcagccgcgccgggaaggcagaggcgctcacctctgatcac 789 Query: 118 cgggcctcccgtgaggatgagagggaaagaattgagaacctgggcgg-ttcgttgtgaac 176 |||||||| || |||||||||||||||||||||||||| ||||| || ||||| ||||| Sbjct: 790 cgggcctcgcgcgaggatgagagggaaagaattgagaatctgggtggattcgtggtgaat 849 Query: 177 aaccgagggacatggcgagtgcagggctccttggcagtgtcaagaggcatcggtgatgca 236 ||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 850 taccgaggaacatggcgagttcagggatccttagcagtgtcaagaggcatcggtgatgca 909 Query: 237 cacctcaagcaatgggtggtggctgatccagataccaggacactccttgttgacccacag 296 ||||||||||| ||||||||| |||||||||| |||| || || |||||| | ||| Sbjct: 910 cacctcaagcagtgggtggtgtctgatccagacaccacaactctgggtgttgattcgcag 969 Query: 297 tgcgaattcttggtacttgcctctgatggcttgtgggataaggtggataaccaggaagcc 356 |||||||||||| | |||||||||||||| |||||||| |||||||| |||||||| || Sbjct: 970 tgcgaattcttgattcttgcctctgatggtttgtgggacaaggtggagaaccaggaggca 1029 Query: 357 atagacatagccaggcctctctgcatcggcaatgacaaggcttctagcatggctgcttgc 416 | ||||| |||||||| || | |||| |||| ||||| |||||| ||||| |||||||| Sbjct: 1030 gttgacattgccaggccgctttacatcagcaacgacaaagcttctcgcatgactgcttgc 1089 Query: 417 agaaggcttgtcgaaaccgcgggttccagggggtctaccgatgacatcagcgttttgatc 476 || ||||| |||||||| |||| | | ||||| || || || || |||||| || ||||| Sbjct: 1090 aggaggctcgtcgaaactgcggttactaggggctcgactgacgatatcagcattgtgatc 1149 Query: 477 ataca 481 ||||| Sbjct: 1150 ataca 1154
>emb|AJ242803.1|SST242803 Sporobolus stapfianus partial mRNA for putative serine/threonine phosphatase type 2c Length = 1075 Score = 256 bits (129), Expect = 1e-64 Identities = 343/413 (83%), Gaps = 1/413 (0%) Strand = Plus / Plus Query: 7 tgctgcgtcactgcattgatccagaagggcggcctcaccgtgtccaacactggagattgc 66 ||||||||||| || || |||| ||||||||||| ||| ||||| |||||||||| Sbjct: 316 tgctgcgtcacagctgtgctccaaaagggcggcctggtcgtttccaatgttggagattgc 375 Query: 67 cgtgctgtcctcagccgggcaggaacggcggaggcacttacctctgatcaccgggcctcc 126 || || || ||||||||| |||| | ||| ||||| || |||||||| |||||||| || Sbjct: 376 cgcgccgtgctcagccggtcagggaaggcagaggcgctcacctctgaccaccgggcatca 435 Query: 127 cgtgaggatgagagggaaagaattgagaacctgggcgg-ttcgttgtgaacaaccgaggg 185 || |||||||||| ||| || ||||||||||||||||| || || ||||| |||| || Sbjct: 436 cgggaggatgagaaggagaggattgagaacctgggcggatttgtggtgaattaccgtgga 495 Query: 186 acatggcgagtgcagggctccttggcagtgtcaagaggcatcggtgatgcacacctcaag 245 ||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||| ||| Sbjct: 496 acatggcgagtccagggctccttggcagtgtccagaggcatcggggatgctcaccttaag 555 Query: 246 caatgggtggtggctgatccagataccaggacactccttgttgacccacagtgcgaattc 305 |||||| | |||||||||||||| |||||||| |||||||| |||| || ||||| ||| Sbjct: 556 caatggattgtggctgatccagacaccaggactctccttgtagaccagcactgcgagttc 615 Query: 306 ttggtacttgcctctgatggcttgtgggataaggtggataaccaggaagccatagacata 365 ||| | ||||| ||||||||| |||||||||| | || || ||||| || | ||| | Sbjct: 616 ttgatccttgcttctgatggcctgtgggataaaattgacaatcaggaggcggtggacctt 675 Query: 366 gccaggcctctctgcatcggcaatgacaaggcttctagcatggctgcttgcag 418 || |||||||||||| | ||||||||||||||||| |||||||||| ||||| Sbjct: 676 gcgcggcctctctgcaccagcaatgacaaggcttctcgcatggctgcctgcag 728
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 232 bits (117), Expect = 2e-57 Identities = 267/317 (84%) Strand = Plus / Plus Query: 165 ttcgttgtgaacaaccgagggacatggcgagtgcagggctccttggcagtgtcaagaggc 224 ||||| ||||| ||||||| ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 10134793 ttcgtggtgaattaccgaggaacatggcgagttcagggatccttagcagtgtcaagaggc 10134852 Query: 225 atcggtgatgcacacctcaagcaatgggtggtggctgatccagataccaggacactcctt 284 ||||||||||||||||||||||| ||||||||| |||||||||| |||| || || | Sbjct: 10134853 atcggtgatgcacacctcaagcagtgggtggtgtctgatccagacaccacaactctgggt 10134912 Query: 285 gttgacccacagtgcgaattcttggtacttgcctctgatggcttgtgggataaggtggat 344 ||||| | ||||||||||||||| | |||||||||||||| |||||||| |||||||| Sbjct: 10134913 gttgattcgcagtgcgaattcttgattcttgcctctgatggtttgtgggacaaggtggag 10134972 Query: 345 aaccaggaagccatagacatagccaggcctctctgcatcggcaatgacaaggcttctagc 404 |||||||| || | ||||| |||||||| || | |||| |||| ||||| |||||| || Sbjct: 10134973 aaccaggaggcagttgacattgccaggccgctttacatcagcaacgacaaagcttctcgc 10135032 Query: 405 atggctgcttgcagaaggcttgtcgaaaccgcgggttccagggggtctaccgatgacatc 464 ||| |||||||||| ||||| |||||||| |||| | | ||||| || || || || ||| Sbjct: 10135033 atgactgcttgcaggaggctcgtcgaaactgcggttactaggggctcgactgacgatatc 10135092 Query: 465 agcgttttgatcataca 481 ||| || |||||||||| Sbjct: 10135093 agcattgtgatcataca 10135109 Score = 109 bits (55), Expect = 2e-20 Identities = 91/103 (88%) Strand = Plus / Plus Query: 58 ggagattgccgtgctgtcctcagccgggcaggaacggcggaggcacttacctctgatcac 117 |||||||||||||| || |||||||| || || | ||| ||||| || |||||||||||| Sbjct: 10134526 ggagattgccgtgccgtgctcagccgcgccgggaaggcagaggcgctcacctctgatcac 10134585 Query: 118 cgggcctcccgtgaggatgagagggaaagaattgagaacctgg 160 |||||||| || |||||||||||||||||||||||||| |||| Sbjct: 10134586 cgggcctcgcgcgaggatgagagggaaagaattgagaatctgg 10134628 Score = 65.9 bits (33), Expect = 2e-07 Identities = 49/53 (92%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 706 attcattctttgattctaatgtaataaggcagggttagtgctcacctcatact 758 |||||||||||||||||||||||||||||| | |||| | ||||||||||||| Sbjct: 10135431 attcattctttgattctaatgtaataaggc-gagttactactcacctcatact 10135482
>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05, complete sequence Length = 122116 Score = 232 bits (117), Expect = 2e-57 Identities = 267/317 (84%) Strand = Plus / Plus Query: 165 ttcgttgtgaacaaccgagggacatggcgagtgcagggctccttggcagtgtcaagaggc 224 ||||| ||||| ||||||| ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 82293 ttcgtggtgaattaccgaggaacatggcgagttcagggatccttagcagtgtcaagaggc 82352 Query: 225 atcggtgatgcacacctcaagcaatgggtggtggctgatccagataccaggacactcctt 284 ||||||||||||||||||||||| ||||||||| |||||||||| |||| || || | Sbjct: 82353 atcggtgatgcacacctcaagcagtgggtggtgtctgatccagacaccacaactctgggt 82412 Query: 285 gttgacccacagtgcgaattcttggtacttgcctctgatggcttgtgggataaggtggat 344 ||||| | ||||||||||||||| | |||||||||||||| |||||||| |||||||| Sbjct: 82413 gttgattcgcagtgcgaattcttgattcttgcctctgatggtttgtgggacaaggtggag 82472 Query: 345 aaccaggaagccatagacatagccaggcctctctgcatcggcaatgacaaggcttctagc 404 |||||||| || | ||||| |||||||| || | |||| |||| ||||| |||||| || Sbjct: 82473 aaccaggaggcagttgacattgccaggccgctttacatcagcaacgacaaagcttctcgc 82532 Query: 405 atggctgcttgcagaaggcttgtcgaaaccgcgggttccagggggtctaccgatgacatc 464 ||| |||||||||| ||||| |||||||| |||| | | ||||| || || || || ||| Sbjct: 82533 atgactgcttgcaggaggctcgtcgaaactgcggttactaggggctcgactgacgatatc 82592 Query: 465 agcgttttgatcataca 481 ||| || |||||||||| Sbjct: 82593 agcattgtgatcataca 82609 Score = 109 bits (55), Expect = 2e-20 Identities = 91/103 (88%) Strand = Plus / Plus Query: 58 ggagattgccgtgctgtcctcagccgggcaggaacggcggaggcacttacctctgatcac 117 |||||||||||||| || |||||||| || || | ||| ||||| || |||||||||||| Sbjct: 82026 ggagattgccgtgccgtgctcagccgcgccgggaaggcagaggcgctcacctctgatcac 82085 Query: 118 cgggcctcccgtgaggatgagagggaaagaattgagaacctgg 160 |||||||| || |||||||||||||||||||||||||| |||| Sbjct: 82086 cgggcctcgcgcgaggatgagagggaaagaattgagaatctgg 82128 Score = 65.9 bits (33), Expect = 2e-07 Identities = 49/53 (92%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 706 attcattctttgattctaatgtaataaggcagggttagtgctcacctcatact 758 |||||||||||||||||||||||||||||| | |||| | ||||||||||||| Sbjct: 82931 attcattctttgattctaatgtaataaggc-gagttactactcacctcatact 82982
>emb|CT835158.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI009M06, full insert sequence Length = 587 Score = 65.9 bits (33), Expect = 2e-07 Identities = 49/53 (92%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 706 attcattctttgattctaatgtaataaggcagggttagtgctcacctcatact 758 |||||||||||||||||||||||||||||| | |||| | ||||||||||||| Sbjct: 466 attcattctttgattctaatgtaataaggc-gagttactactcacctcatact 517
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 46.1 bits (23), Expect = 0.22 Identities = 26/27 (96%) Strand = Plus / Minus Query: 699 tccattcattcattctttgattctaat 725 |||||||||||||||||||||| |||| Sbjct: 3713447 tccattcattcattctttgattttaat 3713421
>emb|AL713933.6|CNS07YPE Oryza sativa chromosome 12, . BAC OJ1041_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104421 Score = 46.1 bits (23), Expect = 0.22 Identities = 26/27 (96%) Strand = Plus / Plus Query: 699 tccattcattcattctttgattctaat 725 |||||||||||||||||||||| |||| Sbjct: 36226 tccattcattcattctttgattttaat 36252
>emb|CR391999.10| Zebrafish DNA sequence from clone CH211-261L7 in linkage group 5, complete sequence Length = 176655 Score = 44.1 bits (22), Expect = 0.86 Identities = 22/22 (100%) Strand = Plus / Plus Query: 695 taattccattcattcattcttt 716 |||||||||||||||||||||| Sbjct: 90301 taattccattcattcattcttt 90322
>emb|AL513523.33| Human DNA sequence from clone RP11-216N14 on chromosome 1 Contains a survival of motor neuron protein interacting protein 1 pseudogene (SIP1), a novel gene (FLJ21919), two novel genes, a novel gene, the SLC27A3 gene for solute carrier family 27 (fatty acid transporter), member 3, a pseudogene similar to part of putative neuronal cell adhesion molecule (PUNC), the 3' end of the gene for transcription repressor p66 beta component of the MeCP1 complex (P66beta), a adipose differentiation-related protein (ADFP) pseudogene and a CpG island, complete sequence Length = 150166 Score = 44.1 bits (22), Expect = 0.86 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 689 ttaatttaattccattcattcattctttgattct 722 |||||||||||| |||||||||||| |||||||| Sbjct: 114198 ttaatttaattc-attcattcattcgttgattct 114166
>gb|AC153497.8| Mus musculus 10 BAC RP23-226H21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 179741 Score = 44.1 bits (22), Expect = 0.86 Identities = 25/26 (96%) Strand = Plus / Minus Query: 733 ggcagggttagtgctcacctcatact 758 |||| ||||||||||||||||||||| Sbjct: 50225 ggcatggttagtgctcacctcatact 50200
>emb|AL929549.16| Zebrafish DNA sequence from clone CH211-149L22 in linkage group 5, complete sequence Length = 146059 Score = 44.1 bits (22), Expect = 0.86 Identities = 22/22 (100%) Strand = Plus / Plus Query: 695 taattccattcattcattcttt 716 |||||||||||||||||||||| Sbjct: 36915 taattccattcattcattcttt 36936
>gb|AC153825.7| Mus musculus 10 BAC RP23-70B19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 279677 Score = 44.1 bits (22), Expect = 0.86 Identities = 25/26 (96%) Strand = Plus / Minus Query: 733 ggcagggttagtgctcacctcatact 758 |||| ||||||||||||||||||||| Sbjct: 228154 ggcatggttagtgctcacctcatact 228129
>gb|AC190056.4| Rhesus Macaque BAC CH250-499C6 () complete sequence Length = 170973 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 701 cattcattcattctttgattc 721 ||||||||||||||||||||| Sbjct: 163274 cattcattcattctttgattc 163294
>ref|XM_001031038.1| Tetrahymena thermophila SB210 Protein phosphatase 2C containing protein (TTHERM_00942970) mRNA, complete cds Length = 1311 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 gcctctgatggcttgtgggat 335 ||||||||||||||||||||| Sbjct: 1075 gcctctgatggcttgtgggat 1095
>gb|AC107638.17| Mus musculus, clone RP23-44D14, complete sequence Length = 231286 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 703 ttcattcattctttgattcta 723 ||||||||||||||||||||| Sbjct: 199815 ttcattcattctttgattcta 199795
>gb|AC165445.1| Mus musculus BAC clone RP23-10J16 from chromosome 17, complete sequence Length = 209118 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 692 atttaattccattcattcatt 712 ||||||||||||||||||||| Sbjct: 3829 atttaattccattcattcatt 3849
>emb|CR381573.14| Zebrafish DNA sequence from clone DKEY-23M15 in linkage group 24, complete sequence Length = 120376 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 692 atttaattccattcattcatt 712 ||||||||||||||||||||| Sbjct: 39041 atttaattccattcattcatt 39021
>emb|AL355603.17| Human DNA sequence from clone RP11-394M3 on chromosome 13 Contains the 5' end of a novel gene (KIAA1165) (likely ortholog of mouse Nedd4 WW domain-binding protein 5A), a novel gene and a CpG island, complete sequence Length = 101771 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 694 ttaattccattcattcattct 714 ||||||||||||||||||||| Sbjct: 19299 ttaattccattcattcattct 19279
>gb|AC154646.2| Mus musculus BAC clone RP23-283B12 from chromosome 14, complete sequence Length = 189102 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 699 tccattcattcattctttgattcta 723 ||||||||||||||| ||||||||| Sbjct: 47625 tccattcattcattccttgattcta 47601
>gb|AC150313.7| Mus musculus BAC clone RP23-436A18 from chromosome 7, complete sequence Length = 204095 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 703 ttcattcattctttgattcta 723 ||||||||||||||||||||| Sbjct: 51313 ttcattcattctttgattcta 51293
>emb|BX663528.10| Zebrafish DNA sequence from clone DKEYP-47F9 in linkage group 17, complete sequence Length = 193986 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 689 ttaatttaattccattcattcattc 713 ||||||||||| ||||||||||||| Sbjct: 100374 ttaatttaatttcattcattcattc 100350
>gb|AC096653.1| Homo sapiens BAC clone RP11-16P17 from 4, complete sequence Length = 113404 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gtgaggatgagagggaaagaa 148 ||||||||||||||||||||| Sbjct: 59750 gtgaggatgagagggaaagaa 59730
>gb|AC026888.6|AC026888 Homo sapiens chromosome 14 clone CTD-2243E23 and CTD-2009K21 map 14q24.3-31, complete sequence Length = 208894 Score = 42.1 bits (21), Expect = 3.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 692 atttaattccattcattcattctttgatt 720 |||||||| ||||||||||||| |||||| Sbjct: 123103 atttaattacattcattcattcattgatt 123131
>emb|BX005057.8| Zebrafish DNA sequence from clone DKEY-12L12 in linkage group 24, complete sequence Length = 238625 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 692 atttaattccattcattcatt 712 ||||||||||||||||||||| Sbjct: 77804 atttaattccattcattcatt 77824
>emb|AL450399.16| Mouse DNA sequence from clone RP23-286I5 on chromosome X, complete sequence Length = 207922 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 701 cattcattcattctttgattc 721 ||||||||||||||||||||| Sbjct: 159791 cattcattcattctttgattc 159811 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 138,685,489 Number of extensions: 7221454 Number of successful extensions: 149637 Number of sequences better than 10.0: 27 Number of HSP's gapped: 149634 Number of HSP's successfully gapped: 37 Length of query: 900 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 877 Effective length of database: 18,503,978,556 Effective search space: 16227989193612 Effective search space used: 16227989193612 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
