ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf32i12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q88QT4:SURA_PSEPK Chaperone surA precursor - Pseudomonas putida ... 33 4.9

>Q88QT4:SURA_PSEPK Chaperone surA precursor - Pseudomonas putida (strain KT2440)|
          Length = 427
 Score = 33.1 bits (74), Expect = 4.9
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
 Frame = +2

Query: 1349 GSYEQLREHARTAHLLAKP------ALVDISRKRSWDRLEREQEFGDVISAIRSQNPGAV 1510
            GS   LR+     H+L KP      A  +   +R +DR++  ++FG++  +  S++PG+ 
Sbjct: 269  GSENVLRDEVHVRHILIKPSEIRSEAATEQLAERLYDRIKNGEDFGELAKSF-SEDPGSA 327

Query: 1511 IVG 1519
            + G
Sbjct: 328  LNG 330


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 365,187,390
Number of extensions: 7753149
Number of successful extensions: 17666
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17653
Number of HSP's successfully gapped: 1
Length of query: 729
Length of database: 100,686,439
Length adjustment: 121
Effective length of query: 608
Effective length of database: 67,496,744
Effective search space: 41038020352
Effective search space used: 41038020352
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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