ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf35j11 |
|---|---|
| Clone Library Name | barley_pub |
>AK107797:Os05g0164200 | Length = 178 Score = 33.9 bits (76), Expect = 0.099 Identities = 20/59 (33%), Positives = 30/59 (50%) Frame = -3 Query: 330 IRSRSERVEQILPRNARRDLVRKIRRERRPNRAGSTAERARSAPAKPSSDGEVEAGGRK 154 +R R+ + + P ARR R+ RR R+P+RA + R A+ V AGGR+ Sbjct: 42 VRRRAPPLRPVSPAAARRR--RRRRRRRQPSRAAPPGDPGRQLRARGDQRRGVRAGGRR 98
>AK062356:Os06g0318800 | Length = 80 Score = 33.9 bits (76), Expect = 0.099 Identities = 19/62 (30%), Positives = 30/62 (48%) Frame = -3 Query: 336 RSIRSRSERVEQILPRNARRDLVRKIRRERRPNRAGSTAERARSAPAKPSSDGEVEAGGR 157 RS + E + P ++RR L+ + RRE+ R G ER R+ +P GGR Sbjct: 8 RSTQPNPEPRAREKPESSRRRLLHERRREQGDERGGRDGERGRAPGRRPGHRRRRRRGGR 67 Query: 156 KL 151 ++ Sbjct: 68 RV 69
>Os08g0447600:Os08g0447600 | Length = 168 Score = 31.6 bits (70), Expect = 0.49 Identities = 24/85 (28%), Positives = 36/85 (42%) Frame = -3 Query: 375 KQTNQNTAADHYPRSIRSRSERVEQILPRNARRDLVRKIRRERRPNRAGSTAERARSAPA 196 ++T + A PRS R+ + LPR +RR R RRP R G A R R Sbjct: 73 RRTPRRGGAPPRPRSGRTGGWPPRRPLPRGSRR-------RPRRPRRRGRAASRRRRRGR 125 Query: 195 KPSSDGEVEAGGRKLYRAGQSGVTA 121 + + G GG + + + + A Sbjct: 126 RRARVGRSGGGGWRRWGSPSAAAAA 150
>AK102761:Os04g0511700 | Length = 464 Score = 31.6 bits (70), Expect = 0.49 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = -3 Query: 378 KKQTNQNTAADHYPRSIRSRSERVEQILPRNARRDLVRKIRRERRP--NRAGSTAERARS 205 K Q N N + P+S + E ++ RN RD + +R P N + +A++ Sbjct: 256 KDQQNDNEVSSPAPKSSSTSVEEQSPLIQRNNHRDRGQYVRPVLNPVQNMSQWKEVKAQA 315 Query: 204 APAKPSSDGEVEA 166 APAK S+ V + Sbjct: 316 APAKKSNKENVNS 328
>Os09g0538900:Os09g0538900 | Length = 241 Score = 31.2 bits (69), Expect = 0.64 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%) Frame = -3 Query: 336 RSIRSRSERVEQILPRNA--RRDLVRKIRRERRPNRAGS--TAERARSAPAKPSSDGEVE 169 R SR+E+ +P A R+DL + RR RA + TAERAR+A A + Sbjct: 53 RRAASRTEKAATGVPWGASRRKDLAGSMPESRRAARADAAQTAERARAAAAAAVAASRST 112 Query: 168 AGGRKLY 148 A RK++ Sbjct: 113 AACRKVF 119
>AK106759:Os01g0864000 | Length = 201 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/41 (43%), Positives = 23/41 (56%) Frame = -3 Query: 282 RRDLVRKIRRERRPNRAGSTAERARSAPAKPSSDGEVEAGG 160 RR L+R RR RRP R + A A + PA+ +GE GG Sbjct: 74 RRHLLRSGRRCRRPRRRAAAAAGAGAVPAR--GEGERGCGG 112
>AK121165:Os03g0826200 | Length = 79 Score = 30.0 bits (66), Expect = 1.4 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Frame = -3 Query: 291 RNARRDLVRKIRRERRPNRAGSTAERARSAPA-KPSSDGEVEAGG 160 R+A R R+ RR RR + +GST +R APA KP++ E GG Sbjct: 23 RSAPRGGSRRRRRRRRASPSGSTV--SRKAPAKKPAASAADEEGG 65
>AK120563:Os03g0711100 | Length = 421 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = -3 Query: 357 TAADHYPRSIRSRSERVEQILPRNARRDLVRKIRRERRPNRAGSTAERARSAPAKP 190 T + R R R +R ++ + R + VRK+ E+RP G +RA + P P Sbjct: 334 TGGEREARVSRYREKRRTRLFAKKIRYE-VRKLNAEKRPRMKGRFVKRAAALPPLP 388
>AK108392:Os01g0952800 | Length = 180 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 9/55 (16%) Frame = -3 Query: 354 AADHYPRSIRSRSER---------VEQILPRNARRDLVRKIRRERRPNRAGSTAE 217 AADH +R S+ +E+ LPR + L R+ RR+RR R G E Sbjct: 33 AADHLLDELREDSDERGAALALDVLERALPRPSHGHLFRRRRRQRRERRGGEHLE 87
>AK110410: | Length = 850 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 10/70 (14%) Frame = -3 Query: 360 NTAADHYPRS---IRSRSERVEQILPRNARRDLVRKIRRERRP-------NRAGSTAERA 211 NT A+ R + R++ E+ L R A ++ RK+R ERRP +R+ E+ Sbjct: 539 NTLAEKKARQMAELERRNKEAEEELRRIAEKEERRKLRAERRPTDERDREHRSSRRKEKD 598 Query: 210 RSAPAKPSSD 181 R + A+P +D Sbjct: 599 RES-ARPQND 607
>AK119438:Os05g0540100 | Length = 531 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = -3 Query: 291 RNARRDLVRKIRRERRPNRAGSTAERARSAPAKPSSDGEVEAGGRKLYRA 142 R+ R R + + P RAG R R+ A+P S+G R L RA Sbjct: 22 RSPGRCAPRNLAPRQLPRRAGQALGRPRARAAQPRSEGRRHPAARLLPRA 71
>AK071029:Os06g0287500 | Length = 313 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Frame = -3 Query: 420 LEDCI*EEYQQSGPKKQTNQNTAADHYPR---SIRSRSERVEQILPRNARRDLV 268 +EDC+ E G K + Q H R IR RVE++ RN+R L+ Sbjct: 29 IEDCLAEFMVHVGSKSLSQQLMKLKHRHRIAIQIRDLKSRVEEVSDRNSRYSLI 82
>AK070885:Os06g0287500 | Length = 313 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Frame = -3 Query: 420 LEDCI*EEYQQSGPKKQTNQNTAADHYPR---SIRSRSERVEQILPRNARRDLV 268 +EDC+ E G K + Q H R IR RVE++ RN+R L+ Sbjct: 29 IEDCLAEFMVHVGSKSLSQQLMKLKHRHRIAIQIRDLKSRVEEVSDRNSRYSLI 82
>Os11g0105900:Os11g0105900 | Length = 1638 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/48 (25%), Positives = 22/48 (45%) Frame = +3 Query: 507 WFLIGRCSFPDGLSLFCFGSGARLVNCFSVKINRLLVNNSVIPCCKKK 650 W LI +C P + +F + + + K R LVN+ + C ++ Sbjct: 1515 WDLIWKCKLPQKIKIFAWKVASNCLATMDNKRKRKLVNSDICIICNRE 1562
>AK119570:Os05g0208500 | Length = 178 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Frame = -3 Query: 288 NARR--DLVRKIRRERRPNRAGSTAERARSAPAKPSSD 181 N RR D R++RR RRP A + A AP++P D Sbjct: 64 NRRRGGDASRRLRRRRRPEAAEPASLLADLAPSQPDRD 101
>AK100789:Os05g0208500 | Length = 178 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Frame = -3 Query: 288 NARR--DLVRKIRRERRPNRAGSTAERARSAPAKPSSD 181 N RR D R++RR RRP A + A AP++P D Sbjct: 64 NRRRGGDASRRLRRRRRPEAAEPASLLADLAPSQPDRD 101
>AK099793:Os05g0563400 | Length = 264 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = -3 Query: 258 RRERRPNRAGSTAERARSAPAKPSSDGEVEAGGRK 154 RR R P R R+A A P G EAGGR+ Sbjct: 163 RRRRHPPRGRGDRRGVRAALACPGEGGGGEAGGRR 197
>AK063761:Os05g0105900 | Length = 398 Score = 28.5 bits (62), Expect = 4.1 Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 8/112 (7%) Frame = -2 Query: 577 SLAPDPKQNK----LNPSGNEHLPIRNQTNFTRHRLKI-RRFFSDRHRPSRSLVHRVFGG 413 S +P P++ + L+P + PIR ++ R RL RR +S RP +SL HR Sbjct: 264 SPSPPPRRLRSPRHLSPRRDRGSPIRRRSPLPRRRLTPPRRMWSPPRRP-QSLRHRSRSP 322 Query: 412 LHLGRISTIRPKKADKPKYSGRPLPSIDPLEKR---TRRTNSSTERAQRPGP 266 +H RP ++ P SI P R RR SS+ + P P Sbjct: 323 IH-------RPIRS--------PSRSISPRRGRGPPVRRGRSSSSYSDSPTP 359
>AK061591:Os02g0614200 | Length = 144 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/55 (29%), Positives = 22/55 (40%) Frame = -2 Query: 403 GRISTIRPKKADKPKYSGRPLPSIDPLEKRTRRTNSSTERAQRPGPQDPPREAAE 239 GR I PK + PLP+ DPL+ + + P DP +E E Sbjct: 81 GRRPDIFPKFSPMKTPLPHPLPADDPLDDDEEEEEEEPQPQEEPQEDDPDKEEPE 135
>AB071290:Os05g0563400 | Length = 223 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = -3 Query: 258 RRERRPNRAGSTAERARSAPAKPSSDGEVEAGGRK 154 RR R P R R+A A P G EAGGR+ Sbjct: 122 RRRRHPPRGRGDRRGVRAALACPGEGGGGEAGGRR 156
>Os01g0299300:Os01g0299300 | Length = 617 Score = 28.1 bits (61), Expect = 5.4 Identities = 25/94 (26%), Positives = 37/94 (39%) Frame = +2 Query: 320 LERIDRG*WSAAVFWFVCFFGPDC*YSS*MQSSKYAMNKTSARPVPIAKKSPDF*AMSSK 499 LE +D A V W F+G S + S Y MN A V +K P + K Sbjct: 512 LELVDEVYLVALVNWSDMFYGNSTGRSKCLDSFYYFMNPRPAYDVEFMEKVPTRMVVDGK 571 Query: 500 VCLVSYWEVFISRWVKFILFRIRGQTCELFLCED 601 C + ++ V+ + R+ G C F E+ Sbjct: 572 TCESKH----VANMVQGEIGRVLGFECTKFTREN 601
>AK102369:Os04g0347100 | Length = 301 Score = 28.1 bits (61), Expect = 5.4 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Frame = -3 Query: 339 PRSIRSRSERVEQILPRNARR---DLVRKIRRERRPNRAGSTAERARSAPAKPSSDGEV 172 PR + R Q LPR RR VR+ RR R P G+ + R P + G V Sbjct: 25 PRPLHDR-----QRLPRQRRRRDVPAVRRARRRREPEVDGAPRQAGRPLPPRRGERGGV 78
>AK071246:Os01g0511000 | Length = 186 Score = 28.1 bits (61), Expect = 5.4 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 5/67 (7%) Frame = -3 Query: 345 HYPRSIRSRSERVEQILPRNARRD-----LVRKIRRERRPNRAGSTAERARSAPAKPSSD 181 H PR R R Q PR ARR + +++ + R S+ +AR P + D Sbjct: 115 HPPRLQGRRGRRRRQPAPRRARRPHPLQARLLQLQLQARRQACRSSRRQARRVPQQQQPD 174 Query: 180 GEVEAGG 160 AGG Sbjct: 175 ARDGAGG 181
>Os08g0428800:Os08g0428800 | Length = 471 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/43 (27%), Positives = 18/43 (41%) Frame = -2 Query: 382 PKKADKPKYSGRPLPSIDPLEKRTRRTNSSTERAQRPGPQDPP 254 P K P+ GRP S DP+ ++ + + P PP Sbjct: 106 PPKPSSPRPRGRPPKSKDPISDAIPKSRGRPPKKAKTAPAPPP 148
>AK120527:Os03g0265400 | Length = 323 Score = 27.7 bits (60), Expect = 7.1 Identities = 18/55 (32%), Positives = 26/55 (47%) Frame = -3 Query: 294 PRNARRDLVRKIRRERRPNRAGSTAERARSAPAKPSSDGEVEAGGRKLYRAGQSG 130 P AR + R I +R+ R G+ + R GEV GGRK Y+ ++G Sbjct: 89 PSTARAVVHRAIITDRQNKRRGTASTLTR---------GEVRGGGRKPYQQKKTG 134
>AK104424:Os03g0265400 | Length = 323 Score = 27.7 bits (60), Expect = 7.1 Identities = 18/55 (32%), Positives = 26/55 (47%) Frame = -3 Query: 294 PRNARRDLVRKIRRERRPNRAGSTAERARSAPAKPSSDGEVEAGGRKLYRAGQSG 130 P AR + R I +R+ R G+ + R GEV GGRK Y+ ++G Sbjct: 89 PSTARAVVHRAIITDRQNKRRGTASTLTR---------GEVRGGGRKPYQQKKTG 134
>AK104116:Os03g0265400 | Length = 323 Score = 27.7 bits (60), Expect = 7.1 Identities = 18/55 (32%), Positives = 26/55 (47%) Frame = -3 Query: 294 PRNARRDLVRKIRRERRPNRAGSTAERARSAPAKPSSDGEVEAGGRKLYRAGQSG 130 P AR + R I +R+ R G+ + R GEV GGRK Y+ ++G Sbjct: 89 PSTARAVVHRAIITDRQNKRRGTASTLTR---------GEVRGGGRKPYQQKKTG 134
>AK065338:Os01g0851000 | Length = 531 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = -2 Query: 364 PKYSGRPLPSIDPLEKRT--RRTNSSTERAQRPGPQDPPR 251 P+ R PS P + +T RRT +T+ + G ++PP+ Sbjct: 52 PRRGRRKSPSPSPPKAKTTRRRTKKNTQESDSEGEEEPPK 91
>AK061468:Os03g0265400 | Length = 323 Score = 27.7 bits (60), Expect = 7.1 Identities = 18/55 (32%), Positives = 26/55 (47%) Frame = -3 Query: 294 PRNARRDLVRKIRRERRPNRAGSTAERARSAPAKPSSDGEVEAGGRKLYRAGQSG 130 P AR + R I +R+ R G+ + R GEV GGRK Y+ ++G Sbjct: 89 PSTARAVVHRAIITDRQNKRRGTASTLTR---------GEVRGGGRKPYQQKKTG 134
>AK112074:Os08g0282500 | Length = 457 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Frame = -2 Query: 394 STIRPKKADKPKYSGRPLPSIDPLEKRTR-----RTNSSTERAQRPGPQDPP 254 S+ RPKK P + P+P + RTR + SS+ A P P+ PP Sbjct: 46 SSKRPKKQPPPPRA-TPIPVVLRRSLRTRGLPPSTSTSSSSAASPPAPESPP 96
>AK111905:Os08g0282500 | Length = 457 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Frame = -2 Query: 394 STIRPKKADKPKYSGRPLPSIDPLEKRTR-----RTNSSTERAQRPGPQDPP 254 S+ RPKK P + P+P + RTR + SS+ A P P+ PP Sbjct: 46 SSKRPKKQPPPPRA-TPIPVVLRRSLRTRGLPPSTSTSSSSAASPPAPESPP 96
>AK111322:Os11g0241200 | Length = 164 Score = 27.3 bits (59), Expect = 9.2 Identities = 21/68 (30%), Positives = 30/68 (44%) Frame = -3 Query: 333 SIRSRSERVEQILPRNARRDLVRKIRRERRPNRAGSTAERARSAPAKPSSDGEVEAGGRK 154 S R + R I R +RR + RR R +R+GS R + +G GGR+ Sbjct: 10 STRRGTPRTRSIKKRRSRR----RRRRCRSRSRSGSAGSRRSWRAGRRRREGRRRTGGRR 65 Query: 153 LYRAGQSG 130 R G+ G Sbjct: 66 --RRGRRG 71
>AK105272:Os08g0532500 | Length = 446 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +2 Query: 152 SFLPPASTSPSLLGFAGADLARSAVD 229 SFLPP ++ P+L A A AR VD Sbjct: 11 SFLPPQASPPALAPAAAAAAARDGVD 36
>AK099233:Os03g0583800 | Length = 358 Score = 27.3 bits (59), Expect = 9.2 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = -3 Query: 354 AADHYPRSIRSRSERVEQILPRNARRDLVRKIRRERRPN-RAGSTAERARSAPAKPSSDG 178 A+ P +R R P + L+R R RR RA + AE A P P ++G Sbjct: 9 ASSPSPSPASTRLLRGHHPPPSCSAPSLLRLTRSSRRLRLRAAAAAEEADVLPG-PGAEG 67 Query: 177 EVEAGGR 157 E+ GGR Sbjct: 68 EMATGGR 74
>AK065746:Os07g0607200 | Length = 196 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Frame = -3 Query: 345 HYPRSIR--SRSERVEQILPRNARRDLVRKIRRERRPNRAGSTAERARSAPAKPSSDGEV 172 H+PR +R R+ + LP R + R + P T E+ P + ++GEV Sbjct: 19 HHPRHLRLHGRTTVFQARLPSPQRTNQHRLLAVTTAPPEPEKTEEQQLLHPLQEPAEGEV 78 Query: 171 EAGG 160 GG Sbjct: 79 SGGG 82
>AK064786:Os03g0583800 | Length = 358 Score = 27.3 bits (59), Expect = 9.2 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = -3 Query: 354 AADHYPRSIRSRSERVEQILPRNARRDLVRKIRRERRPN-RAGSTAERARSAPAKPSSDG 178 A+ P +R R P + L+R R RR RA + AE A P P ++G Sbjct: 9 ASSPSPSPASTRLLRGHHPPPSCSAPSLLRLTRSSRRLRLRAAAAAEEADVLPG-PGAEG 67 Query: 177 EVEAGGR 157 E+ GGR Sbjct: 68 EMATGGR 74 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 14,912,402 Number of extensions: 299715 Number of successful extensions: 1617 Number of sequences better than 10.0: 36 Number of HSP's gapped: 1589 Number of HSP's successfully gapped: 36 Length of query: 219 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 122 Effective length of database: 11,515,878 Effective search space: 1404937116 Effective search space used: 1404937116 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
