>Q76C99:RF1_ORYSA Rf1 protein, mitochondrial precursor - Oryza sativa (Rice)|
          Length = 791
 Score =  109 bits (273), Expect = 6e-23
 Identities = 122/542 (22%), Positives = 236/542 (43%), Gaps = 12/542 (2%)
 Frame = +2

Query: 440  MLARGARPDAYTFPPLLKAMAAERGAVPPSVGHSVHAHVVKFGLELNAHVASSLVLMYAA 619
            ++ +G R DA  F PLLK + A++          V   + + G   N    + L+     
Sbjct: 113  VIKKGFRVDAIAFTPLLKGLCADKRT--SDAMDIVLRRMTELGCIPNVFSYNILLKGLCD 170

Query: 620  RGDGMTARALLDVQ-PARGGGTP---VVWNALMSGHKRSRQFRLSCCSFLDMARAGVVAT 787
                  A  LL +    RGGG+P   V +  +++G  +      +  ++ +M   G++  
Sbjct: 171  ENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPD 230

Query: 788  PVTYITVLSACGKGNDVLLGMQLHKRIIESGVLPDLKVENALVDMYAECGQMEAAWDLFE 967
             VTY ++++A  K   +   M++   ++++GV+PD    N+++  Y   GQ + A    +
Sbjct: 231  VVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLK 290

Query: 968  GMQVRNIVSWTSVISGFVRLRQVNRARAVFDGMPERDTVSWTAMIDGYVQTGQFREALEM 1147
             M+                           DG+ E D V+++ ++D   + G+  EA ++
Sbjct: 291  KMR--------------------------SDGV-EPDVVTYSLLMDYLCKNGRCMEARKI 323

Query: 1148 FREMQFSKVKADEFTMVSIVTACAQLGALETGEWARIYMNRHGIKMDTFVGNALIDMYSK 1327
            F  M    +K +  T  +++   A  GAL         M R+GI  D +V + LI  Y+K
Sbjct: 324  FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAK 383

Query: 1328 CGSIKRALDVFNEMHSR----DKFTWTAVILGLAVNGHGEEAIHMFDRMLRTFEAPDEVT 1495
             G + +A+ VF++M  +    +  T+ AVI  L  +G  E+A+  F++M+    +P  + 
Sbjct: 384  QGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 443

Query: 1496 FIGVLTACTHAGLVDEGRDFFLSMTGTYSIAPNVLHYGCIIDLLGRAGKLREA---LETI 1666
            +  ++         +   +  L M     I  N + +  IID   + G++ E+    E +
Sbjct: 444  YNSLIHGLCTCNKWERAEELILEMLDR-GICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502

Query: 1667 GKMPMKPSSAIWGTLL-AACRVHGNSEIGELAAERLLELDPENSMAYVLLSNLYAKSNRW 1843
             ++ +KP+   + TL+   C      E  +L +  +      N++ Y  L N Y K +R 
Sbjct: 503  VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562

Query: 1844 GDVRWLRQVMMEKGIKKEPGCSLIEMNGTIHEFVAGDRSHPMSKEIYSKLDKVLTDLKNA 2023
             D   L + M   G+  +    +I  N  I + +   R    +KE+Y ++ +  T ++ +
Sbjct: 563  EDALVLFKEMESSGVSPD----IITYN-IILQGLFQTRRTAAAKELYVRITESGTQIELS 617

Query: 2024 GY 2029
             Y
Sbjct: 618  TY 619



 Score = 78.2 bits (191), Expect = 2e-13
 Identities = 83/395 (21%), Positives = 172/395 (43%), Gaps = 14/395 (3%)
 Frame = +2

Query: 425  RVYVGMLARGARPDAYTFPPLLKAMAAERGAVPPSVGHSVHAHVVKFGLELNAHVASSLV 604
            +++  M  RG +P+  T+  LL+  A +   V     H +   +V+ G+  + +V S L+
Sbjct: 322  KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM---HGLLDLMVRNGIHPDHYVFSILI 378

Query: 605  LMYAARGDGMTARALLDVQPARG-GGTPVVWNALMSGHKRSRQFRLSCCSFLDMARAGVV 781
              YA +G    A  +      +G     V + A++    +S +   +   F  M   G+ 
Sbjct: 379  CAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438

Query: 782  ATPVTYITVLSACGKGNDVLLGMQLHKRIIESGVLPDLKVENALVDMYAECGQMEAAWDL 961
               + Y +++      N      +L   +++ G+  +    N+++D + + G++  +  L
Sbjct: 439  PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 498

Query: 962  FEGMQVR-----NIVSWTSVISGFVRLRQVNRARAVFDGMP----ERDTVSWTAMIDGYV 1114
            FE + VR     N++++ ++I+G+    +++ A  +  GM     + +TV+++ +I+GY 
Sbjct: 499  FE-LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557

Query: 1115 QTGQFREALEMFREMQFSKVKADEFTMVSIVTACAQLGALETGEWARIYMNRHGIKMDTF 1294
            +  +  +AL +F+EM+ S V  D  T   I+    Q       +   + +   G +++  
Sbjct: 558  KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617

Query: 1295 VGNALIDMYSKCGSIKRALDVFNEMHSRD----KFTWTAVILGLAVNGHGEEAIHMFDRM 1462
              N ++    K      AL +F  +   D      T+  +I  L   G  +EA  +F   
Sbjct: 618  TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 677

Query: 1463 LRTFEAPDEVTFIGVLTACTHAGLVDEGRDFFLSM 1567
                  P+  T+  +       GL++E    FLSM
Sbjct: 678  SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 712

>P0C043:Y4791_ARATH Putative PPR-repeat protein At4g17915 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 463

 Score = 78.6 bits (192), Expect = 1e-13
 Identities = 78/343 (22%), Positives = 148/343 (43%), Gaps = 12/343 (3%)
 Frame = +2

Query: 692  WNALMSGHKRSRQFRLSCCSFLDMARAGVVATPVTYITVLSACGK-GNDVLLGMQLHKRI 868
            +N+L++G  R          F +M   G+     +Y T++    K G        L+K +
Sbjct: 86   YNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDL 145

Query: 869  IESGVLPDLKVENALVDMYAECGQMEAAWDLFEGMQVR---NIVSWTSVISGFVRLRQVN 1039
              +G+ P     N L+D   +CG ++ A +LF+ MQ R    ++++  +I+G  + R+V 
Sbjct: 146  QLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQSRFKPELMTYNILINGLCKSRRVG 205

Query: 1040 RARAVFDGMPER----DTVSWTAMIDGYVQTGQFREALEMFREMQFSKVKADEFTMVSIV 1207
             A+ +   + +     + V++T ++  Y +T + R  L++F EM+      D +   ++V
Sbjct: 206  TAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVV 265

Query: 1208 TACAQLGALETGEWARIYMNRHGIKMDTFVGNALIDMYSKCGSIKRALDVFNEMHSR--- 1378
            +A  + G  +        + R G + D    N L+++Y K G++    D+  E+  R   
Sbjct: 266  SALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYFKDGNLDAVDDLLGEIERRGMK 325

Query: 1379 -DKFTWTAVILGLAVNGHGEEAIHMFDRMLRTFEAPDEVTFIGVLTACTHAGLVDEGRDF 1555
             D++T T ++ GL                LRT                   G      + 
Sbjct: 326  ADEYTHTIIVNGL----------------LRT-------------------GQTRRAEEH 350

Query: 1556 FLSMTGTYSIAPNVLHYGCIIDLLGRAGKLREALETIGKMPMK 1684
            F+SM G   I  N++   C++D L +AG +  A+     M +K
Sbjct: 351  FVSM-GEMGIGLNLVTCNCLVDGLCKAGHVDRAMRYFESMEVK 392



 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 55/243 (22%), Positives = 103/243 (42%)
 Frame = +2

Query: 686  VVWNALMSGHKRSRQFRLSCCSFLDMARAGVVATPVTYITVLSACGKGNDVLLGMQLHKR 865
            + +N L++G  +SR+   +     ++ ++G     VTY T+L    K   +  G+QL   
Sbjct: 189  MTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLE 248

Query: 866  IIESGVLPDLKVENALVDMYAECGQMEAAWDLFEGMQVRNIVSWTSVISGFVRLRQVNRA 1045
            +   G   D     A+V    + G+ + A++  + +                    V + 
Sbjct: 249  MKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQEL--------------------VRKG 288

Query: 1046 RAVFDGMPERDTVSWTAMIDGYVQTGQFREALEMFREMQFSKVKADEFTMVSIVTACAQL 1225
            R         D VS+  +++ Y + G      ++  E++   +KADE+T   IV    + 
Sbjct: 289  R-------RHDIVSYNTLLNLYFKDGNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRT 341

Query: 1226 GALETGEWARIYMNRHGIKMDTFVGNALIDMYSKCGSIKRALDVFNEMHSRDKFTWTAVI 1405
            G     E   + M   GI ++    N L+D   K G + RA+  F  M  +D++T+T+V+
Sbjct: 342  GQTRRAEEHFVSMGEMGIGLNLVTCNCLVDGLCKAGHVDRAMRYFESMEVKDEYTYTSVV 401

Query: 1406 LGL 1414
              L
Sbjct: 402  HNL 404



 Score = 38.1 bits (87), Expect = 0.21
 Identities = 43/174 (24%), Positives = 66/174 (37%), Gaps = 5/174 (2%)
 Frame = +2

Query: 1379 DKFTWTAVILGLAVNGHGEEAIHMFDRMLRTFEAPDEVTFIGVLTACTHAGLVDEGRDFF 1558
            D  T+  +I G       EEA  +  RM      PD  T+  ++       ++D     F
Sbjct: 47   DVVTYNTLISGYCRFVGIEEAYAVTRRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLF 106

Query: 1559 LSMTGTYSIAPNVLHYGCIIDLLGRAGKLREALETIGK----MPMKPSSAIWGTLL-AAC 1723
              M   + I P++  Y  ++    + GK  EA   + K      + P    +  LL A C
Sbjct: 107  DEML-EWGIYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALC 165

Query: 1724 RVHGNSEIGELAAERLLELDPENSMAYVLLSNLYAKSNRWGDVRWLRQVMMEKG 1885
            +        EL  E      PE  M Y +L N   KS R G  +W+   + + G
Sbjct: 166  KCGYIDNALELFKEMQSRFKPE-LMTYNILINGLCKSRRVGTAKWMLTELKKSG 218

>Q5R655:PTCD1_PONPY Pentatricopeptide repeat protein 1 - Pongo pygmaeus (Orangutan)|
          Length = 698

 Score = 45.4 bits (106), Expect = 0.001
 Identities = 35/162 (21%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
 Frame = +2

Query: 1085 SWTAMIDGYVQTGQFREALEMFREMQFSKVKADEFTMVSIVTACAQL----GALETGEWA 1252
            ++TA+I G  + G  ++A  ++ +M+   ++  + T  ++   CA+      AL++    
Sbjct: 173  NYTALIGGCGRVGYLKKAFSLYNQMKKRDLEPSDATYTALFNVCAESPWKDSALQSALKL 232

Query: 1253 RIYMNRHGIKMDTFVGNALIDMYSKCGSIKRALDVFNEM----HSRDKFTWTAVILGLAV 1420
            R  +     +++    +AL+ M +KC  ++  LDVF E+    H   + T++ +++G   
Sbjct: 233  RQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEIIHKGHVVTEETFSFLLMGCIQ 292

Query: 1421 NGHG--EEAIHMFDRMLRTFEAPDEVTFIGVLTACTHAGLVD 1540
            +       A+ ++  ML     P   ++  +L A    GL D
Sbjct: 293  DKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDCGLGD 334

>Q8C2E4:PTCD1_MOUSE Pentatricopeptide repeat protein 1 - Mus musculus (Mouse)|
          Length = 695

 Score = 44.3 bits (103), Expect = 0.003
 Identities = 34/162 (20%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
 Frame = +2

Query: 1085 SWTAMIDGYVQTGQFREALEMFREMQFSKVKADEFTMVSIVTACAQL----GALETGEWA 1252
            ++T +I G  + G  ++A  +F +M+   ++  + T  ++   CA+      AL++    
Sbjct: 173  NYTVLIGGCGRVGYLKKAFRLFNDMKKRDLEPSDATYTALFNVCAESPWKDSALQSALKL 232

Query: 1253 RIYMNRHGIKMDTFVGNALIDMYSKCGSIKRALDVFNEM----HSRDKFTWTAVILGLAV 1420
            R  +     +++    +AL+ + +KC  ++  LDVF E+    H+  + T+  +++G   
Sbjct: 233  RQQLQARNFQLNLKTYHALLKVAAKCADLRLCLDVFKEIIQRGHAVTEETFCFLLVGCIQ 292

Query: 1421 NGHG--EEAIHMFDRMLRTFEAPDEVTFIGVLTACTHAGLVD 1540
            +      +A+ ++ +ML     P    +  +L A    GL D
Sbjct: 293  DKKTGFRQAMQVWRQMLSLGIKPSRHGYNLLLEAARDCGLGD 334

>O75127:PTCD1_HUMAN Pentatricopeptide repeat protein 1 - Homo sapiens (Human)|
          Length = 700

 Score = 43.9 bits (102), Expect = 0.004
 Identities = 34/162 (20%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
 Frame = +2

Query: 1085 SWTAMIDGYVQTGQFREALEMFREMQFSKVKADEFTMVSIVTACAQL----GALETGEWA 1252
            ++T +I G  + G  ++A  ++ +M+   ++  + T  ++   CA+      AL++    
Sbjct: 175  NYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTALFNVCAESPWKDSALQSALKL 234

Query: 1253 RIYMNRHGIKMDTFVGNALIDMYSKCGSIKRALDVFNEM----HSRDKFTWTAVILGLAV 1420
            R  +     +++    +AL+ M +KC  ++  LDVF E+    H   + T++ +++G   
Sbjct: 235  RQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEIIHKGHVVTEETFSFLLMGCIQ 294

Query: 1421 NGHG--EEAIHMFDRMLRTFEAPDEVTFIGVLTACTHAGLVD 1540
            +       A+ ++  ML     P   ++  +L A    GL D
Sbjct: 295  DKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDCGLGD 336

>Q8TFG9:YL61_SCHPO Uncharacterized serine/threonine-rich protein PB15E9.01c precursor -|
            Schizosaccharomyces pombe (Fission yeast)
          Length = 943

 Score = 40.8 bits (94), Expect = 0.033
 Identities = 86/352 (24%), Positives = 143/352 (40%), Gaps = 5/352 (1%)
 Frame = -2

Query: 1551 SRPSSTKPA*VQAVRTPMKVTSSGASNVLSILSNIWIASSPWPFTARPSITAVQVNLSLL 1372
            S  SS+  +   A  T   ++S+ ASN  +  S   +ASS    T   + T+  ++ ++ 
Sbjct: 194  SLASSSLNSTTSATATSSSLSSTAASNSATSSS---LASSSLNSTTSATATSSSISSTVS 250

Query: 1371 CIS-LNTSNALLILPHFEYMSMSAFPTKVSILIPCLFM*ILAHSPVSKAPSCAHAVTMLT 1195
              + L +SN+          S SA     S L+P       + +P S   S A++ T  T
Sbjct: 251  SSTPLTSSNSTTAATSASATSSSA-QYNTSSLLP-------SSTPSSTPLSSANSTTA-T 301

Query: 1194 MVNSSAFTLLNCXXXXXXXXXXX*PVCT*PSIIAVH-ETVSLSGIPSNTAL-ARLTWRSL 1021
              +S+  T +N              V +  S  A    +  LS + S TA  A  T  + 
Sbjct: 302  SASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTS 361

Query: 1020 TNPEITDVQDTIFLTCMPSNKSQAASIWPHSAYISTSAFSTLRSGSTPLSMMRLCSCIP- 844
             N        +  LT + S  + +AS  P ++  ST++ S     S+        S +P 
Sbjct: 362  VNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSV----SSTAPSYNTSSVLPT 417

Query: 843  -SRTSLPLPHADSTVM*VTGVATTPALAISRKEQHDSLNCLLLL*PDISAFHTTGVPPPL 667
             S +S PL  A+ST    T  ++TP  +++      + +  L      +A  T+    PL
Sbjct: 418  SSVSSTPLSSANSTT--ATSASSTPLSSVNSTTATSASSTPLSSVNSTTA--TSASSTPL 473

Query: 666  AGCTSSRARAVMPSPLAAYMSTSELATWALSSSPNLTTCAWTECPTDGGTAP 511
                S+ A +   +PL +  STS  +    +SS  LT+   T   +   TAP
Sbjct: 474  TSVNSTTATSASSTPLTSVNSTSATS----ASSTPLTSANSTTSTSVSSTAP 521



 Score = 38.9 bits (89), Expect = 0.12
 Identities = 91/377 (24%), Positives = 147/377 (38%), Gaps = 10/377 (2%)
 Frame = -2

Query: 1491 TSSGASNVLSILSNIWIASSPWPFTARP---SITAVQVNLSLLCISLNTSNALLILPHFE 1321
            +SS AS+ L+  S++  +S+    +A P   S+T+     S L  S  TS++L       
Sbjct: 77   SSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLA------ 130

Query: 1320 YMSMSAFPTKVSILIPCLFM*ILAHSPV---SKAPSCAHAVTMLTMVNSSAFTLLNCXXX 1150
                S+  T  S+    +    LA S     S A S  ++ T  T  +S+  + L+    
Sbjct: 131  ----SSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAA 186

Query: 1149 XXXXXXXX*PVCT*PSIIAVHETVSLSGIPSNTALARLTWRSLTNPEITDVQDTIFLTCM 970
                        +  S  +   T + S + S  A    T  SL +  +     T      
Sbjct: 187  SNSATSSSLASSSLNSTTSA--TATSSSLSSTAASNSATSSSLASSSLNST--TSATATS 242

Query: 969  PSNKSQAASIWPHSAYISTSAFSTLRSGSTPLSMMRLCSCIPSRT--SLPLPHADSTVM* 796
             S  S  +S  P ++  ST+A +T  S ++  +     S +PS T  S PL  A+ST   
Sbjct: 243  SSISSTVSSSTPLTSSNSTTA-ATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTT-- 299

Query: 795  VTGVATTPALAI-SRKEQHDSLNCLLLL*PDISAFHTTGVPPPLAGCTSSRARAVMPSPL 619
             T  ++TP  ++ S      S   L  +    S   T+    PL+   S+ A +   +PL
Sbjct: 300  ATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPL 359

Query: 618  AAYMSTSELATWALSSSPNLTTCAWTECPTDGGTAPRSAAIALSNGGNVYASGLAPRASM 439
             +  ST    T   +SS  LT+   T   +   T   SA    S   +  A      + +
Sbjct: 360  TSVNST----TATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSSVL 415

Query: 438  PTYTRKGI-LGNGNRTT 391
            PT +     L + N TT
Sbjct: 416  PTSSVSSTPLSSANSTT 432



 Score = 35.0 bits (79), Expect = 1.8
 Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 2/186 (1%)
 Frame = -2

Query: 978 TCMPSNKSQAASIWPHSAYISTSAFSTLRSGSTPLSMMRLC--SCIPSRTSLPLPHADST 805
           T + S  S  A+    +   S ++ +T  + STPLS +     +   S +S PL   +ST
Sbjct: 290 TPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNST 349

Query: 804 VM*VTGVATTPALAISRKEQHDSLNCLLLL*PDISAFHTTGVPPPLAGCTSSRARAVMPS 625
               T  ++TP  +++      + +  L      SA   +  P   A  T+S +   + S
Sbjct: 350 T--ATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTS---VSS 404

Query: 624 PLAAYMSTSELATWALSSSPNLTTCAWTECPTDGGTAPRSAAIALSNGGNVYASGLAPRA 445
              +Y ++S L T ++SS+P  +  + T       T+  S  ++  N     ++   P +
Sbjct: 405 TAPSYNTSSVLPTSSVSSTPLSSANSTT------ATSASSTPLSSVNSTTATSASSTPLS 458

Query: 444 SMPTYT 427
           S+ + T
Sbjct: 459 SVNSTT 464

>Q10451:YLE1_SCHPO Uncharacterized protein C1093.01 - Schizosaccharomyces pombe (Fission|
            yeast)
          Length = 1261

 Score = 38.5 bits (88), Expect = 0.16
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
 Frame = +2

Query: 1454 DRMLRTFEAPDEVTFIGVLTACTHAGLVDEGRDFF--LSMTGTYSIAPNVLHYGCIIDLL 1627
            D M      P   TF  ++   T  G  D+          T  +++ P+V  Y  ++  L
Sbjct: 877  DNMKMLGYIPRASTFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKL 936

Query: 1628 GRAGKLREALETIGKMP---MKPSSAIWGTLL-AACRVHGNSEIGELAAE 1765
            GRA +  E  +   +M    + P+S  +GT++ AACR+   S   +L AE
Sbjct: 937  GRARRTTECWKLFQEMKESGLLPTSVTYGTVINAACRIGDESLAEKLFAE 986

>P32323:AGA1_YEAST A-agglutinin anchorage subunit precursor - Saccharomyces cerevisiae|
            (Baker's yeast)
          Length = 725

 Score = 38.5 bits (88), Expect = 0.16
 Identities = 72/306 (23%), Positives = 125/306 (40%), Gaps = 14/306 (4%)
 Frame = -2

Query: 1368 ISLNTSNALLILPHFEYMS-MSAFPTKVSILIPCLFM*ILAHSPVSKAPSCAHAVTMLTM 1192
            ++++TS+A  I P   Y + +S F T            +   + V    +C  + T+ T 
Sbjct: 73   LTVSTSSAAEISPSISYATTLSRFST------------LTLSTEVCSHEACPSSSTLPTT 120

Query: 1191 VNS--SAFTLLNCXXXXXXXXXXX*PVCT*PSIIAVHET-----VSLSGI-PSNTAL--- 1045
              S  S FT   C            P C   +I ++ E      VS S I PS+ ++   
Sbjct: 121  TLSVTSKFTSYIC------------PTCHTTAISSLSEVGTTTVVSSSAIEPSSASIISP 168

Query: 1044 --ARLTWRSLTNPEITDVQDTIFLTCMPSNKSQAASIWPHSAYISTSAFSTLRSGSTPLS 871
              + L+  + +NP  T +  T       S    + S  P S   STS+ ST  S S+  +
Sbjct: 169  VTSTLSSTTSSNPTTTSLSST-------STSPSSTSTSPSST--STSSSSTSTSSSSTST 219

Query: 870  MMRLCSCIPSRTSLPLPHADSTVM*VTGVATTPALAISRKEQHDSLNCLLLL*PDISAFH 691
                 S  PS TS             + + +T + + S  +   S +         S+  
Sbjct: 220  SSSSTSTSPSSTSTS-----------SSLTSTSSSSTSTSQSSTSTSS--------SSTS 260

Query: 690  TTGVPPPLAGCTSSRARAVMPSPLAAYMSTSELATWALSSSPNLTTCAWTECPTDGGTAP 511
            T+    P +  TSS + +  PS  +   S++  ++++ S+SP+LT+ +    PT   T+P
Sbjct: 261  TS----PSSTSTSSSSTSTSPSSKSTSASSTSTSSYSTSTSPSLTSSS----PTLASTSP 312

Query: 510  RSAAIA 493
             S +I+
Sbjct: 313  SSTSIS 318



 Score = 37.4 bits (85), Expect = 0.36
 Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 2/207 (0%)
 Frame = -2

Query: 1419 TARPSITAVQVNLSLLCISLNTSNALLILPHFEYMSM--SAFPTKVSILIPCLFM*ILAH 1246
            TA  S++ V     +   ++  S+A +I P    +S   S+ PT  S+            
Sbjct: 139  TAISSLSEVGTTTVVSSSAIEPSSASIISPVTSTLSSTTSSNPTTTSL------------ 186

Query: 1245 SPVSKAPSCAHAVTMLTMVNSSAFTLLNCXXXXXXXXXXX*PVCT*PSIIAVHETVSLSG 1066
            S  S +PS        T  +SS+ +  +             P  T  S  ++  T S S 
Sbjct: 187  SSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSS-SLTSTSSSST 245

Query: 1065 IPSNTALARLTWRSLTNPEITDVQDTIFLTCMPSNKSQAASIWPHSAYISTSAFSTLRSG 886
              S ++ +  +  + T+P  T    +   T  PS+KS +AS        STS++ST  S 
Sbjct: 246  STSQSSTSTSSSSTSTSPSSTSTSSSSTSTS-PSSKSTSASS------TSTSSYSTSTSP 298

Query: 885  STPLSMMRLCSCIPSRTSLPLPHADST 805
            S   S   L S  PS TS+     DST
Sbjct: 299  SLTSSSPTLASTSPSSTSISSTFTDST 325

>Q83GP6:ILVC_TROWT Ketol-acid reductoisomerase - Tropheryma whipplei (strain Twist)|
            (Whipple's bacillus)
          Length = 333

 Score = 37.4 bits (85), Expect = 0.36
 Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 12/153 (7%)
 Frame = +2

Query: 602  VLMYAARGDG-MTARALLDVQPARGGGTPVVWNALMSGHKRSRQFRLSCCSFLDMARAGV 778
            VLM A +G G M  R  LD +     GTP V+        R     LS    +   RAG 
Sbjct: 129  VLMVAPKGPGHMVRREYLDNR-----GTPAVFAIEKDASGRCFDLALSYAKGIGALRAGA 183

Query: 779  VATPVTYITVLSACGKGNDVLLGMQL-----HKRIIESGVLPDLKVENAL------VDMY 925
            + T  T  T     G+   +  G++      ++ ++E+G  P++     L      +D+ 
Sbjct: 184  IQTTFTEETETDLFGEQAVLCGGLEQLIQYGYETLVEAGYQPEVAYFEVLHELKLIIDLI 243

Query: 926  AECGQMEAAWDLFEGMQVRNIVSWTSVISGFVR 1024
             E G  ++ W + +  +  + VS   VI   V+
Sbjct: 244  VEGGLSKSRWSISDTAEYGSYVSGPRVIDKHVK 276

>Q83HI9:ILVC_TROW8 Ketol-acid reductoisomerase - Tropheryma whipplei (strain TW08/27)|
            (Whipple's bacillus)
          Length = 333

 Score = 37.4 bits (85), Expect = 0.36
 Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 12/153 (7%)
 Frame = +2

Query: 602  VLMYAARGDG-MTARALLDVQPARGGGTPVVWNALMSGHKRSRQFRLSCCSFLDMARAGV 778
            VLM A +G G M  R  LD +     GTP V+        R     LS    +   RAG 
Sbjct: 129  VLMVAPKGPGHMVRREYLDNR-----GTPAVFAIEKDASGRCFDLALSYAKGIGALRAGA 183

Query: 779  VATPVTYITVLSACGKGNDVLLGMQL-----HKRIIESGVLPDLKVENAL------VDMY 925
            + T  T  T     G+   +  G++      ++ ++E+G  P++     L      +D+ 
Sbjct: 184  IQTTFTEETETDLFGEQAVLCGGLEQLIQYGYETLVEAGYQPEVAYFEVLHELKLIIDLI 243

Query: 926  AECGQMEAAWDLFEGMQVRNIVSWTSVISGFVR 1024
             E G  ++ W + +  +  + VS   VI   V+
Sbjct: 244  VEGGLSKSRWSISDTAEYGSYVSGPRVIDKHVK 276

>Q09624:YS89_CAEEL Uncharacterized protein ZK945.9 - Caenorhabditis elegans|
          Length = 3178

 Score = 37.0 bits (84), Expect = 0.47
 Identities = 55/269 (20%), Positives = 104/269 (38%), Gaps = 27/269 (10%)
 Frame = -2

Query: 1113 T*PSIIAVHETV-SLSGIPSNTALARLTWRSLTNPEITDVQ----DTIFLTCMPSNKSQA 949
            T P+   V  TV S + +P++T+       + T+   T        T F +   ++ S  
Sbjct: 279  TTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSST 338

Query: 948  ASIWPHSAYISTSAFSTLRSGSTPLSMM-------------RLCSCIPSRTSLPLPHADS 808
            ++    S+ I++S  ST  S S P +                +CS +   T+       +
Sbjct: 339  STTQQSSSTITSSPSSTTLSTSIPTTTTPEITSTLSSLPDNAICSYLDETTTST---TFT 395

Query: 807  TVM*VTGVATTPALAISRKEQHDSLNCLLLL*PDI----SAFHTTGVPPPLAGCTSSRAR 640
            T M  +     P+ + +  E   + + +    P      S   T+   P  +  T+S + 
Sbjct: 396  TTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPST 455

Query: 639  AVMPSPLAAYMS-----TSELATWALSSSPNLTTCAWTECPTDGGTAPRSAAIALSNGGN 475
            + + S + +  S     T+  +T + S+SP+ T    T  P+   T P S++   S+  +
Sbjct: 456  SPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTAS 515

Query: 474  VYASGLAPRASMPTYTRKGILGNGNRTTT 388
               S  A      T T++      + TTT
Sbjct: 516  SSVSSTASSTQSSTSTQQSSTTTKSETTT 544

>Q12947:FOXF2_HUMAN Forkhead box protein F2 - Homo sapiens (Human)|
          Length = 444

 Score = 37.0 bits (84), Expect = 0.47
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
 Frame = -2

Query: 690 TTGVPPPLA---GCT----SSRARAVMPSPLAAYMSTSELATWALSSSPNLTTCAWTECP 532
           T G PPP      C+    + +A  + P P AA  + +   T + SSS +  +CA +   
Sbjct: 3   TEGGPPPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSSS 62

Query: 531 TDGGTAPRSAAIALSNGGNVYASGLAPRAS 442
           ++  +AP +A  +   GG    SG A +AS
Sbjct: 63  SNSASAPSAACKSAGGGGAGAGSGGAKKAS 92

>P28968:VGLX_EHV1B Glycoprotein X precursor - Equine herpesvirus 1 (strain Ab4p) (EHV-1)|
            (Equine abortion virus)
          Length = 797

 Score = 36.6 bits (83), Expect = 0.62
 Identities = 78/372 (20%), Positives = 135/372 (36%), Gaps = 19/372 (5%)
 Frame = -2

Query: 1491 TSSGASNVLSILSNIWIASSPWP----FTARPSITAVQVNLSLLCISLNTSNALLILPHF 1324
            TSSG +N  S  +     +S  P     T+ PS T+ Q + +    S   S A       
Sbjct: 42   TSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTA------- 94

Query: 1323 EYMSMSAFPTKVSILIPCLFM*ILAHSPVSK--APSCAHAVTMLTMVNSSAFTLLNCXXX 1150
               S ++ PT  S             +P +   AP+ A   T +T   S++         
Sbjct: 95   --SSTTSIPTSTSTETTTTTPTASTTTPTTTTAAPTTAATTTAVTTAASTSAETTTATAT 152

Query: 1149 XXXXXXXX*PVCT*PSIIAVHETVSLSGIPSNTALARLTWRSLTNPEITDVQDTIFLTCM 970
                     P  T  +  A     + +   ++T  A  T  + T    T    T   T  
Sbjct: 153  ATSTPTTTTPTST-TTTTATTTVPTTASTTTDTTTAATTTAATTTAATTTAATTTAATTT 211

Query: 969  PSNKSQAASIWPHSAYISTSAFSTLRS--GSTPLSMMRLCSCIPSRTSLPLPHADSTVM* 796
             +  + A +    ++  +T+A +T  +   +T  +     +   + T+   P + ST   
Sbjct: 212  AATTTAATTTAATTSSATTAATTTAATTTAATTTAATTTAATTTAATTTGSPTSGSTS-- 269

Query: 795  VTGVAT-TPALAISRKEQHDSLNCLLLL*PDISAFHTTGVPPPLAGCTSSRARAVMPSPL 619
             TG +T TP+ + +      S +         SA  TT  P P +  TS+ +    P+  
Sbjct: 270  TTGASTSTPSASTATSATPTSTST--------SAAATTSTPTPTSAATSAESTTEAPTST 321

Query: 618  ----------AAYMSTSELATWALSSSPNLTTCAWTECPTDGGTAPRSAAIALSNGGNVY 469
                      A   +TS  +T   +S+ + TT A+T   T+  T+P S+  + S      
Sbjct: 322  PTTDTTTPSEATTATTSPESTTVSASTTSATTTAFT---TESHTSPDSSTGSTSTAEPSS 378

Query: 468  ASGLAPRASMPT 433
               L P  + P+
Sbjct: 379  TFTLTPSTATPS 390

>Q6S6W0:VGLX_EHV1V Glycoprotein X precursor - Equine herpesvirus 1 (strain V592) (EHV-1)|
            (Equine abortion virus)
          Length = 866

 Score = 36.2 bits (82), Expect = 0.80
 Identities = 48/218 (22%), Positives = 83/218 (38%), Gaps = 11/218 (5%)
 Frame = -2

Query: 1053 TALARLTWRSLTNPEITDVQDTIFLTCMPSNKSQAASIWPHSAYISTSAFSTLRSGSTPL 874
            T  A  T  + T    T    T   T   +  + A +    +   +T+A +T  + +T  
Sbjct: 257  TTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAA 316

Query: 873  SMMRLCSCIPSRTSLPLPHADSTVM*VTGVAT-TPALAISRKEQHDSLNCLLLL*PDISA 697
            +     +   + T  P   + ST    TG +T TP+ + +      S +         SA
Sbjct: 317  TTTAATTTAATTTGSPTSGSTST----TGASTSTPSASTATSATPTSTST--------SA 364

Query: 696  FHTTGVPPPLAGCTSSRARAVMPSPL----------AAYMSTSELATWALSSSPNLTTCA 547
              TT  P P +  TS+ +    P+            A   +TS  +T   +S+ + TT A
Sbjct: 365  AATTSTPTPTSAATSAESTTEAPTSTPTTDTTTPSEATTATTSPESTTVSASTTSATTTA 424

Query: 546  WTECPTDGGTAPRSAAIALSNGGNVYASGLAPRASMPT 433
            +T   T+  T+P S+  + S         L P  + P+
Sbjct: 425  FT---TESHTSPDSSTGSTSTAEPSSTFTLTPSTATPS 459

>Q8BK72:RT27_MOUSE Mitochondrial 28S ribosomal protein S27 - Mus musculus (Mouse)|
          Length = 415

 Score = 36.2 bits (82), Expect = 0.80
 Identities = 20/68 (29%), Positives = 36/68 (52%)
 Frame = +2

Query: 1184 EFTMVSIVTACAQLGALETGEWARIYMNRHGIKMDTFVGNALIDMYSKCGSIKRALDVFN 1363
            ++T+ S +  C + GA +   +  +   ++GI  D F  N L+D + K G+ K AL V  
Sbjct: 106  DWTIHSWIRQCLKYGAQDKALYTLVNKVQYGIFPDNFTFNLLMDYFIKKGNYKDALSVVF 165

Query: 1364 EMHSRDKF 1387
            E+  ++ F
Sbjct: 166  EIMMQEAF 173

>Q3BPK3:ILVC_XANC5 Ketol-acid reductoisomerase - Xanthomonas campestris pv. vesicatoria|
            (strain 85-10)
          Length = 333

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 15/217 (6%)
 Frame = +2

Query: 533  GHSVHAHVVKFGLELNAHVASSLVLMYAARGDGMTARALLDVQPARGGGTPVVWNALMSG 712
            G +VH  ++K   +L+       V++ A +G G   R   ++    G G P ++      
Sbjct: 98   GLNVHFDMIKPRADLD-------VVLVAPKGPGALVRREYEI----GRGVPCIYAVYQDT 146

Query: 713  HKRSRQFRLSCCSFLDMARAGVVATPVTYITVLSACGK--------------GNDVLLGM 850
              ++ QF L+    L  ARA ++ T     T     G+              G +VL+  
Sbjct: 147  SGKAEQFALTYAGGLGGARANIIKTTFKEETETDLFGEQAVLCGGASSLVQAGFEVLVEA 206

Query: 851  QLHKRIIESGVLPDLKVENALVDMYAECGQMEAAWDLFEGMQVRNIVSWTSVISGFVRLR 1030
                 I    VL +LK+   +VD++ E G       + E  Q  + VS   VI    + R
Sbjct: 207  GYQPEIAYYEVLHELKL---IVDLFYEGGITRMLEFVSETAQYGDYVSGPRVIDAGTKAR 263

Query: 1031 QVNRARAVFDGMPERDTVSWTAMID-GYVQTGQFREA 1138
              +    + +G     T +W A  D G     +F++A
Sbjct: 264  MKDVLTDIQNG---TFTKNWVAEYDAGLPNYNKFKQA 297

>Q8GWA9:Y2033_ARATH Putative PPR-repeat protein At2g17033 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 505

 Score = 35.0 bits (79), Expect = 1.8
 Identities = 20/81 (24%), Positives = 35/81 (43%)
 Frame = +2

Query: 1079 TVSWTAMIDGYVQTGQFREALEMFREMQFSKVKADEFTMVSIVTACAQLGALETGEWARI 1258
            T ++ +M+ G     Q  +A  +  EM+  K+K   F   S++    +LG  +       
Sbjct: 244  TQAYKSMVSGLCNMDQPHDAERVIEEMRMEKIKPGLFEYKSVLYGYGRLGLFDDMNRVVH 303

Query: 1259 YMNRHGIKMDTFVGNALIDMY 1321
             M   G K+DT   N ++  Y
Sbjct: 304  RMGTEGHKIDTVCSNMVLSSY 324

>P08640:MUC1_YEAST Mucin-like protein 1 precursor - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 1367

 Score = 35.0 bits (79), Expect = 1.8
 Identities = 51/216 (23%), Positives = 80/216 (37%)
 Frame = -2

Query: 1035 TWRSLTNPEITDVQDTIFLTCMPSNKSQAASIWPHSAYISTSAFSTLRSGSTPLSMMRLC 856
            T  S + P  T    T   +  P   S   S    SA + T + ST  S STP++     
Sbjct: 519  TTESSSAPAPTPSSSTTESSSAPVTSSTTES---SSAPVPTPSSSTTESSSTPVT----- 570

Query: 855  SCIPSRTSLPLPHADSTVM*VTGVATTPALAISRKEQHDSLNCLLLL*PDISAFHTTGVP 676
            S     +S P+P   S+    +  A  P  + S  E   +        P  S+  T    
Sbjct: 571  SSTTESSSAPVPTPSSSTT-ESSSAPVPTPSSSTTESSSAPA------PTPSSSTTESSS 623

Query: 675  PPLAGCTSSRARAVMPSPLAAYMSTSELATWALSSSPNLTTCAWTECPTDGGTAPRSAAI 496
             P+   T+  + A +P+P ++   +S       SSS   ++ A    P+   T   SA +
Sbjct: 624  APVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPV 683

Query: 495  ALSNGGNVYASGLAPRASMPTYTRKGILGNGNRTTT 388
              S       S  AP  S  T +    +   + +TT
Sbjct: 684  TSS----TTESSSAPVTSSTTESSSAPVPTPSSSTT 715



 Score = 33.5 bits (75), Expect = 5.2
 Identities = 36/167 (21%), Positives = 66/167 (39%), Gaps = 1/167 (0%)
 Frame = -2

Query: 930  SAYISTSAFSTLRSGSTPLSMMRLCSCIPSRTSLPLPHADSTVM*VTGVATTPALAISRK 751
            SA + T + ST  S S P+      +   S   +P P + +T       ++ P  + + +
Sbjct: 704  SAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTES-----SSAPVTSSTTE 758

Query: 750  EQHDSLNCLLLL*PDISAFHTTGVPPPL-AGCTSSRARAVMPSPLAAYMSTSELATWALS 574
                 +       P  S   ++  P P  +  T+  + A +P+P ++   +S       S
Sbjct: 759  SSSAPVPT-----PSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSVAPVPTPS 813

Query: 573  SSPNLTTCAWTECPTDGGTAPRSAAIALSNGGNVYASGLAPRASMPT 433
            SS N+T+ A +  P    T   S  +   +     +S  AP +S  T
Sbjct: 814  SSSNITSSAPSSTPFSSSTESSSVPVPTPSSSTTESSS-APVSSSTT 859

>Q99M85:SCRT1_MOUSE Transcriptional repressor scratch 1 - Mus musculus (Mouse)|
          Length = 348

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 22/50 (44%), Positives = 23/50 (46%)
 Frame = -2

Query: 177 DTGERGGPGASRLRDSGSGGARVGSIAGRAHVLRRAGSATDSSGGLPAAG 28
           D G  GGPG    R SGSG A  G     A    RAGS    +GG  A G
Sbjct: 148 DAGGGGGPGT---RGSGSGSASRGGTRVGAGTEARAGSGATGAGGRHACG 194

>Q8PH09:ILVC_XANAC Ketol-acid reductoisomerase - Xanthomonas axonopodis pv. citri|
          Length = 333

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 15/212 (7%)
 Frame = +2

Query: 548  AHVVKFGLELNAHVASSLVLMYAARGDGMTARALLDVQPARGGGTPVVWNALMSGHKRSR 727
            AH +    ++    A   V++ A +G G   R   ++    G G P ++        ++ 
Sbjct: 96   AHGLNVHFDMITPRADLDVVLVAPKGPGALVRREYEI----GRGVPCIYAVYQDTSGKAE 151

Query: 728  QFRLSCCSFLDMARAGVVATPVTYITVLSACGK--------------GNDVLLGMQLHKR 865
            QF L+    L  ARA ++ T     T     G+              G +VL+       
Sbjct: 152  QFALTYAGGLGGARANIIKTTFKEETETDLFGEQAVLCGGASSLVQAGFEVLVEAGYQPE 211

Query: 866  IIESGVLPDLKVENALVDMYAECGQMEAAWDLFEGMQVRNIVSWTSVISGFVRLRQVNRA 1045
            I    VL +LK+   +VD++ E G       + E  Q  + VS   VI    + R  +  
Sbjct: 212  IAYYEVLHELKL---IVDLFYEGGITRMLEFVSETAQYGDYVSGPRVIDAGTKARMKDVL 268

Query: 1046 RAVFDGMPERDTVSWTAMID-GYVQTGQFREA 1138
              + +G     T +W A  D G     +F++A
Sbjct: 269  TDIQNG---TFTKNWVAEYDAGLPNYNKFKQA 297

>Q28T07:ILVC_JANSC Ketol-acid reductoisomerase - Jannaschia sp. (strain CCS1)|
          Length = 340

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +2

Query: 602 VLMYAARGDGMTARALLDVQPARGGGTPVVWNALMSGHKRSRQFRLSCCSFLDMARAGVV 781
           V+M A +G G T R     +  +GGG P +     +   R+ +  LS CS +   R+G++
Sbjct: 125 VIMMAPKGPGHTVRG----EYTKGGGVPCLVAVHQNASDRALEIGLSYCSAIGGGRSGII 180

Query: 782 AT 787
            T
Sbjct: 181 ET 182

>Q99KW3:TARA_MOUSE TRIO and F-actin-binding protein - Mus musculus (Mouse)|
          Length = 2014

 Score = 33.9 bits (76), Expect = 4.0
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
 Frame = -2

Query: 198 DSGSRLEDTGERGGPGASRLRDSGSGG-------ARVGSIAGRAHVLRRAGSATDSSGGL 40
           DS  +   +  RG     R  +SGSGG       A++ S +G   + R+    T +S G 
Sbjct: 195 DSARKATRSPARGDTAGQRKENSGSGGQSAGQHWAKLRSESGYFSLERQRSGQTQASSGT 254

Query: 39  PAAG*RGT 16
           P +G RGT
Sbjct: 255 PPSGPRGT 262

>Q8P5L5:ILVC_XANCP Ketol-acid reductoisomerase - Xanthomonas campestris pv. campestris|
          Length = 333

 Score = 33.5 bits (75), Expect = 5.2
 Identities = 49/217 (22%), Positives = 85/217 (39%), Gaps = 15/217 (6%)
 Frame = +2

Query: 533  GHSVHAHVVKFGLELNAHVASSLVLMYAARGDGMTARALLDVQPARGGGTPVVWNALMSG 712
            G +VH  ++K   +L+       V++ A +G G   R   ++    G G P ++      
Sbjct: 98   GLNVHFDMIKPRADLD-------VVLVAPKGPGALVRREYEI----GRGVPCIYAVYQDT 146

Query: 713  HKRSRQFRLSCCSFLDMARAGVVATPVTYITVLSACGK--------------GNDVLLGM 850
              ++ QF L+    L  ARA ++ T     T     G+              G +VL+  
Sbjct: 147  SGKAEQFALTYAGGLGGARANIIKTTFKEETETDLFGEQAVLCGGASSLVQAGFEVLVEA 206

Query: 851  QLHKRIIESGVLPDLKVENALVDMYAECGQMEAAWDLFEGMQVRNIVSWTSVISGFVRLR 1030
                 I    VL +LK+   +VD++ E G       + E  Q  + VS   VI    + R
Sbjct: 207  GYQPEIAYYEVLHELKL---IVDLFYEGGITRMLEFVSETAQYGDYVSGPRVIDASTKAR 263

Query: 1031 QVNRARAVFDGMPERDTVSWTAMID-GYVQTGQFREA 1138
              +    + +G     T +W A  + G     +F++A
Sbjct: 264  MKDVLTDIQNG---TFTKNWVAEYEAGLPNYTKFKQA 297

>Q4UYF7:ILVC_XANC8 Ketol-acid reductoisomerase - Xanthomonas campestris pv. campestris|
            (strain 8004)
          Length = 333

 Score = 33.5 bits (75), Expect = 5.2
 Identities = 49/217 (22%), Positives = 85/217 (39%), Gaps = 15/217 (6%)
 Frame = +2

Query: 533  GHSVHAHVVKFGLELNAHVASSLVLMYAARGDGMTARALLDVQPARGGGTPVVWNALMSG 712
            G +VH  ++K   +L+       V++ A +G G   R   ++    G G P ++      
Sbjct: 98   GLNVHFDMIKPRADLD-------VVLVAPKGPGALVRREYEI----GRGVPCIYAVYQDT 146

Query: 713  HKRSRQFRLSCCSFLDMARAGVVATPVTYITVLSACGK--------------GNDVLLGM 850
              ++ QF L+    L  ARA ++ T     T     G+              G +VL+  
Sbjct: 147  SGKAEQFALTYAGGLGGARANIIKTTFKEETETDLFGEQAVLCGGASSLVQAGFEVLVEA 206

Query: 851  QLHKRIIESGVLPDLKVENALVDMYAECGQMEAAWDLFEGMQVRNIVSWTSVISGFVRLR 1030
                 I    VL +LK+   +VD++ E G       + E  Q  + VS   VI    + R
Sbjct: 207  GYQPEIAYYEVLHELKL---IVDLFYEGGITRMLEFVSETAQYGDYVSGPRVIDASTKAR 263

Query: 1031 QVNRARAVFDGMPERDTVSWTAMID-GYVQTGQFREA 1138
              +    + +G     T +W A  + G     +F++A
Sbjct: 264  MKDVLTDIQNG---TFTKNWVAEYEAGLPNYTKFKQA 297

>Q47BH8:ILVC_DECAR Ketol-acid reductoisomerase - Dechloromonas aromatica (strain RCB)|
          Length = 338

 Score = 33.5 bits (75), Expect = 5.2
 Identities = 37/165 (22%), Positives = 64/165 (38%), Gaps = 11/165 (6%)
 Frame = +2

Query: 602  VLMYAARGDGMTARALLDVQPARGGGTPVVWNALMSGHKRSRQFRLSCCSFLDMARAGVV 781
            V+M A +G G T R+    +  +GGG P +        K+++   LS  +     + GV+
Sbjct: 124  VIMVAPKGPGHTVRS----EYLKGGGVPSLIAVYQDVTKKAKDIALSYAAANGGTKGGVI 179

Query: 782  ATPVTYITVLSACGK-----GNDVLLGMQLHKRIIESGVLPDLKVENAL------VDMYA 928
             T     T     G+     G  V L     + + E+G  P++     L      VD+  
Sbjct: 180  ETNFREETETDLFGEQAVLCGGAVELVKMGFETLTEAGYAPEMAYFECLHELKLIVDLMY 239

Query: 929  ECGQMEAAWDLFEGMQVRNIVSWTSVISGFVRLRQVNRARAVFDG 1063
            E G     + +    +    V+ T VI+   R+   N  + +  G
Sbjct: 240  EGGIANMNYSISNNAEYGEYVTGTEVINEQSRVAMRNALKRIQTG 284

>P04263:K2CA_BOVIN Keratin, type II cytoskeletal 68 kDa, component IA - Bos taurus|
           (Bovine)
          Length = 182

 Score = 33.1 bits (74), Expect = 6.8
 Identities = 22/56 (39%), Positives = 26/56 (46%)
 Frame = -2

Query: 210 SSTNDSGSRLEDTGERGGPGASRLRDSGSGGARVGSIAGRAHVLRRAGSATDSSGG 43
           SS+  SG+     G RGG G+  L     G  R+GS  GR     R   A DSS G
Sbjct: 85  SSSGGSGALGGGAGGRGGLGSGGLGSGSLGSGRLGS-GGRGSRASRGNLALDSSSG 139

>Q3SQ46:ILVC_NITWN Ketol-acid reductoisomerase - Nitrobacter winogradskyi (strain|
           Nb-255 / ATCC 25391)
          Length = 339

 Score = 33.1 bits (74), Expect = 6.8
 Identities = 25/82 (30%), Positives = 34/82 (41%)
 Frame = +2

Query: 542 VHAHVVKFGLELNAHVASSLVLMYAARGDGMTARALLDVQPARGGGTPVVWNALMSGHKR 721
           + AH +     L    A   VLM A +G G T RA    +  RGGG P +          
Sbjct: 105 IFAHGLNVHFNLLDPRADLDVLMIAPKGPGHTVRA----EYQRGGGVPCLIAVAKDSSGN 160

Query: 722 SRQFRLSCCSFLDMARAGVVAT 787
           +    LS  S +   RAG++ T
Sbjct: 161 AHDLGLSYASAIGGGRAGIIET 182

>Q168N1:ILVC_ROSDO Ketol-acid reductoisomerase - Roseobacter denitrificans (strain|
           ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh
           114)) (Roseobacter denitrificans)
          Length = 340

 Score = 32.7 bits (73), Expect = 8.9
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +2

Query: 602 VLMYAARGDGMTARALLDVQPARGGGTPVVWNALMSGHKRSRQFRLSCCSFLDMARAGVV 781
           V+M A +G G T R     +  +GGG P +         R+ +  LS CS +   R+G++
Sbjct: 125 VIMMAPKGPGHTVRG----EYTKGGGVPCLVAVDKDASGRALEIGLSYCSAIGGGRSGII 180

Query: 782 AT 787
            T
Sbjct: 181 ET 182


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 551,193,916
Number of extensions: 12896461
Number of successful extensions: 37169
Number of sequences better than 10.0: 28
Number of HSP's gapped: 37028
Number of HSP's successfully gapped: 36
Length of query: 973
Length of database: 100,686,439
Length adjustment: 123
Effective length of query: 850
Effective length of database: 66,948,154
Effective search space: 56905930900
Effective search space used: 56905930900
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)