ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf32h14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q7ZVT3:SAS6_DANRE Spindle assembly abnormal protein 6 homolog - ... 43 0.008
2Q6UVJ0:SAS6_HUMAN Spindle assembly abnormal protein 6 homolog - ... 42 0.014
3Q80UK7:SAS6_MOUSE Spindle assembly abnormal protein 6 homolog - ... 40 0.052
4Q5ZMV2:SAS6_CHICK Spindle assembly abnormal protein 6 homolog - ... 38 0.20
5Q2TAE3:DYR1A_XENLA Dual specificity tyrosine-phosphorylation-reg... 38 0.26
6Q0IJ08:DYR1A_XENTR Dual specificity tyrosine-phosphorylation-reg... 37 0.34
7Q63470:DYR1A_RAT Dual specificity tyrosine-phosphorylation-regul... 37 0.34
8Q61214:DYR1A_MOUSE Dual specificity tyrosine-phosphorylation-reg... 37 0.34
9Q13627:DYR1A_HUMAN Dual specificity tyrosine-phosphorylation-reg... 37 0.34
10Q6AYT4:F122A_RAT Protein FAM122A - Rattus norvegicus (Rat) 37 0.44
11Q96E09:F122A_HUMAN Protein FAM122A - Homo sapiens (Human) 36 0.98
12P29172:TAU_BOVIN Microtubule-associated protein tau - Bos taurus... 35 1.3
13O83394:SECA_TREPA Preprotein translocase subunit secA - Treponem... 34 2.9
14Q9DB52:F122A_MOUSE Protein FAM122A - Mus musculus (Mouse) 34 2.9
15Q32KT5:CF136_BOVIN Uncharacterized protein C6orf136 homolog - Bo... 34 3.7
16Q13595:TRA2A_HUMAN Transformer-2 protein homolog - Homo sapiens ... 34 3.7
17Q6GN15:CCNL1_XENLA Cyclin-L1 - Xenopus laevis (African clawed frog) 34 3.7
18Q92794:MYST3_HUMAN Histone acetyltransferase MYST3 - Homo sapien... 33 4.9
19Q8MLV1:LBR_DROME Lamin-B receptor - Drosophila melanogaster (Fru... 33 6.4
20Q0PHV7:DACT3_MOUSE Dapper homolog 3 - Mus musculus (Mouse) 33 6.4
21Q8WQC0:RGS7_CAEEL Regulator of G-protein signaling rgs-7 - Caeno... 33 8.3
22Q83034:POLG_RTSVA Genome polyprotein [Contains: Putative leader ... 33 8.3
23Q75LD5:DMI1L_ORYSJ Probable ion channel DMI1-like, chloroplast p... 33 8.3

>Q7ZVT3:SAS6_DANRE Spindle assembly abnormal protein 6 homolog - Danio rerio (Zebrafish)|
            (Brachydanio rerio)
          Length = 627
 Score = 42.7 bits (99), Expect = 0.008
 Identities = 46/210 (21%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
 Frame = +1

Query: 871  SSGNLQLQHRHSQSMLRTREVAVDMSPRFSYCKPTINRDSKMLHRRHSLNLPEHLTRQH- 1047
            +S    L  RH Q +   RE A++   R       + ++ +  H R +  L   ++    
Sbjct: 204  TSQTTSLSSRHMQDLTAEREKALETQSRLQQQNEQLRQELESSHHRSTQQLQTKVSELET 263

Query: 1048 -SRKTTERTHKATSKSIADLAGEIAALEQEVIRKELHLLTLYRRVFDQHLSDSCSFVSKQ 1224
             +R+  ++ +K+ S +I DL  ++ +LE+E  R +  +L+L R   +  L   C    + 
Sbjct: 264  ANRELIDKKYKSDS-TIRDLKAKLTSLEEECQRSKQQVLSLRRE--NSALDSECHEKERL 320

Query: 1225 VDQ---------EAIKSIDEGALRLRDI-------KHSAAFNLPTVSDSMSEVSSRPAS- 1353
            ++Q         + IK  D+  LR +++       K+S   N  +    +S++ S   S 
Sbjct: 321  LNQLQTRVAVLEQEIKDKDQLVLRTKEVLEATQQQKNSVEGNAESKQLQISKLESTVKSL 380

Query: 1354 -----KHSSLVNFLNASISDYVPKISCKLS 1428
                 K + ++  L A +   + KI  K S
Sbjct: 381  SEELIKANGIIKKLQADLKALLGKIKVKNS 410



to top

>Q6UVJ0:SAS6_HUMAN Spindle assembly abnormal protein 6 homolog - Homo sapiens (Human)|
          Length = 657

 Score = 42.0 bits (97), Expect = 0.014
 Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 11/147 (7%)
 Frame = +1

Query: 871  SSGNLQLQHRHSQSMLRTREVAVDMSPRFSYCKPTINRDSKMLHRRHSLNLPEHLTRQH- 1047
            +S    L ++HSQ +   +E A+    ++        +D ++LH+++   L   L+    
Sbjct: 200  ASHTAALTNKHSQELTNEKEKALQAQVQYQQQHEQQKKDLEILHQQNIHQLQNRLSELEA 259

Query: 1048 -SRKTTERTHKATSKSIADLAGEIAALEQEVIRKELHLLTLYRRVFDQHLSDSCSFVSKQ 1224
             ++  TER +K  S +I +L  +++ +E+E+ R +  +L+L R   +  L   C    K 
Sbjct: 260  ANKDLTERKYKGDS-TIRELKAKLSGVEEELQRTKQEVLSLRRE--NSTLDVECHEKEKH 316

Query: 1225 VDQ---------EAIKSIDEGALRLRD 1278
            V+Q         + IK  D+  LR ++
Sbjct: 317  VNQLQTKVAVLEQEIKDKDQLVLRTKE 343



to top

>Q80UK7:SAS6_MOUSE Spindle assembly abnormal protein 6 homolog - Mus musculus (Mouse)|
          Length = 654

 Score = 40.0 bits (92), Expect = 0.052
 Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
 Frame = +1

Query: 871  SSGNLQLQHRHSQSMLRTREVAVDMSPRFSYCKPTINRDSKMLHRRHSLNLPEHLTRQH- 1047
            +S    L ++HSQ +   +E A+    +         ++ + LH+R+   L   L+    
Sbjct: 200  ASHTASLTNKHSQELTAEKEKALQTQVQCQQQHEQQKKELETLHQRNIHQLQSRLSELEA 259

Query: 1048 -SRKTTERTHKATSKSIADLAGEIAALEQEVIRKELHLLTLYRRVFDQHLSDSCSFVSKQ 1224
             +++ TER +K  S ++ +L  ++A +E+E+ R +  +L+L R   +  L   C    K 
Sbjct: 260  ANKELTERKYKGDS-TVRELKAKLAGVEEELQRAKQEVLSLRRE--NCTLDTECHEKEKH 316

Query: 1225 VDQ---------EAIKSIDEGALRLRD 1278
            ++Q         + IK  D+  LR ++
Sbjct: 317  INQLQTKVAVLEQEIKDKDQLVLRTKE 343



to top

>Q5ZMV2:SAS6_CHICK Spindle assembly abnormal protein 6 homolog - Gallus gallus (Chicken)|
          Length = 640

 Score = 38.1 bits (87), Expect = 0.20
 Identities = 41/210 (19%), Positives = 91/210 (43%), Gaps = 9/210 (4%)
 Frame = +1

Query: 889  LQHRHSQSMLRTREVAVDMSPRFSYCKPTINRDSKMLHRRHSLNLPEHLTRQH--SRKTT 1062
            L  +H+Q +   +E A+    ++        ++ + LH+R    L   L+     ++  T
Sbjct: 211  LTSKHTQELTAEKERALQAQTQYQQQHEQQKKELESLHQRSIQQLQNRLSELEVINKDLT 270

Query: 1063 ERTHKATSKSIADLAGEIAALEQEVIRKELHLLTLYRR--VFDQHLSDSCSFVSK----- 1221
            ER +K  S ++ +L  +++ +E E  R +  +++L R     D    +   F+++     
Sbjct: 271  ERRYKGDS-TVRELKAKLSGVEDECQRAKQEVVSLRRENTTLDAECHEKEKFINQLQTRV 329

Query: 1222 QVDQEAIKSIDEGALRLRDIKHSAAFNLPTVSDSMSEVSSRPASKHSSLVNFLNASISDY 1401
             V ++ IK  D+  +R +++   A      + +  +E       K  + +  L+A +   
Sbjct: 330  AVLEQEIKDKDQLVIRTKEVL-DATQEQKVILEENTEKKQSHIEKLETTIKSLSAELLK- 387

Query: 1402 VPKISCKLSEDILGCIASVYCKLASTPSQD 1491
              +I  KL ED+   ++ +  K   T  Q+
Sbjct: 388  ANEIIKKLQEDLKTLMSKLKLKNTVTIQQE 417



to top

>Q2TAE3:DYR1A_XENLA Dual specificity tyrosine-phosphorylation-regulated kinase 1A -|
           Xenopus laevis (African clawed frog)
          Length = 750

 Score = 37.7 bits (86), Expect = 0.26
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
 Frame = +1

Query: 784 SPAMERARRSGTLSETASCAG--TPRSGSGHSSGNLQLQHRHSQSMLRTREVAVD 942
           SPAME+++ SGT S T+S +G  +  S SG +  +   QHRHS     T  VA+D
Sbjct: 488 SPAMEQSQSSGTTSSTSSSSGGSSGTSNSGRARSDPTHQHRHSGGHF-TTAVAMD 541



to top

>Q0IJ08:DYR1A_XENTR Dual specificity tyrosine-phosphorylation-regulated kinase 1A -|
           Xenopus tropicalis (Western clawed frog) (Silurana
           tropicalis)
          Length = 751

 Score = 37.4 bits (85), Expect = 0.34
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +1

Query: 784 SPAMERARRSGTLSETASCAG--TPRSGSGHSSGNLQLQHRHSQSMLRTREVAVD 942
           SPAME+++ SGT S T+S +G  +  S SG +  +   QHRHS         A+D
Sbjct: 488 SPAMEQSQSSGTTSSTSSSSGGSSGTSNSGRARSDPTHQHRHSGGHFTAAVQAMD 542



to top

>Q63470:DYR1A_RAT Dual specificity tyrosine-phosphorylation-regulated kinase 1A -|
           Rattus norvegicus (Rat)
          Length = 763

 Score = 37.4 bits (85), Expect = 0.34
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +1

Query: 784 SPAMERARRSGTLSETASCAG--TPRSGSGHSSGNLQLQHRHSQSMLRTREVAVD 942
           SPAME+++ SGT S T+S +G  +  S SG +  +   QHRHS         A+D
Sbjct: 496 SPAMEQSQSSGTTSSTSSSSGGSSGTSNSGRARSDPTHQHRHSGGHFAAAVQAMD 550



to top

>Q61214:DYR1A_MOUSE Dual specificity tyrosine-phosphorylation-regulated kinase 1A - Mus|
           musculus (Mouse)
          Length = 763

 Score = 37.4 bits (85), Expect = 0.34
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +1

Query: 784 SPAMERARRSGTLSETASCAG--TPRSGSGHSSGNLQLQHRHSQSMLRTREVAVD 942
           SPAME+++ SGT S T+S +G  +  S SG +  +   QHRHS         A+D
Sbjct: 496 SPAMEQSQSSGTTSSTSSSSGGSSGTSNSGRARSDPTHQHRHSGGHFAAAVQAMD 550



to top

>Q13627:DYR1A_HUMAN Dual specificity tyrosine-phosphorylation-regulated kinase 1A -|
           Homo sapiens (Human)
          Length = 763

 Score = 37.4 bits (85), Expect = 0.34
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +1

Query: 784 SPAMERARRSGTLSETASCAG--TPRSGSGHSSGNLQLQHRHSQSMLRTREVAVD 942
           SPAME+++ SGT S T+S +G  +  S SG +  +   QHRHS         A+D
Sbjct: 496 SPAMEQSQSSGTTSSTSSSSGGSSGTSNSGRARSDPTHQHRHSGGHFTAAVQAMD 550



to top

>Q6AYT4:F122A_RAT Protein FAM122A - Rattus norvegicus (Rat)|
          Length = 286

 Score = 37.0 bits (84), Expect = 0.44
 Identities = 32/102 (31%), Positives = 40/102 (39%)
 Frame = +1

Query: 832  ASCAGTPRSGSGHSSGNLQLQHRHSQSMLRTREVAVDMSPRFSYCKPTINRDSKMLHRRH 1011
            A    +P  G G  SG L    R S S      ++ D SP F    P+  R+S     RH
Sbjct: 14   AGTGASPAEGGGPGSGGL----RRSNSAPLIHGLS-DSSPVFQAEAPSARRNSTTFPSRH 68

Query: 1012 SLNLPEHLTRQHSRKTTERTHKATSKSIADLAGEIAALEQEV 1137
             L LP    R HS     R H+   +   DL       E+EV
Sbjct: 69   GLLLPASPVRMHS----SRLHQIKQEEGMDLINRETVHEREV 106



to top

>Q96E09:F122A_HUMAN Protein FAM122A - Homo sapiens (Human)|
          Length = 287

 Score = 35.8 bits (81), Expect = 0.98
 Identities = 30/98 (30%), Positives = 40/98 (40%)
 Frame = +1

Query: 844  GTPRSGSGHSSGNLQLQHRHSQSMLRTREVAVDMSPRFSYCKPTINRDSKMLHRRHSLNL 1023
            G+P  G G S G   L+  +S  ++       D SP F    P+  R+S     RH L L
Sbjct: 18   GSPAEGGG-SGGGGGLRRSNSAPLIHGLS---DTSPVFQAEAPSARRNSTTFPSRHGLLL 73

Query: 1024 PEHLTRQHSRKTTERTHKATSKSIADLAGEIAALEQEV 1137
            P    R HS     R H+   +   DL       E+EV
Sbjct: 74   PASPVRMHS----SRLHQIKQEEGMDLINRETVHEREV 107



to top

>P29172:TAU_BOVIN Microtubule-associated protein tau - Bos taurus (Bovine)|
          Length = 448

 Score = 35.4 bits (80), Expect = 1.3
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = +2

Query: 485 SPTPKKISALLQVPA--PPAGGSRATRRNEPSLQRAWTADPCNAATAARGERSPALPCRH 658
           +PTPK   A +QV    PPAG       +  S  R+  + P +  T     R+P+LP   
Sbjct: 167 TPTPKTSPATMQVQKKPPPAGAKSERGESGKSGDRSGYSSPGSPGTPGSRSRTPSLP--- 223

Query: 659 *VPPSASPGRV 691
             PP+  P +V
Sbjct: 224 -TPPTREPKKV 233



to top

>O83394:SECA_TREPA Preprotein translocase subunit secA - Treponema pallidum|
          Length = 916

 Score = 34.3 bits (77), Expect = 2.9
 Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 6/159 (3%)
 Frame = +1

Query: 1879 LKAAYNVGGESVNAQTIQNSILGCQSHRPSLWVRALFTPAKRSMAGSTTRHPYALHHSEP 2058
            L   Y +G E   ++ I N + G    +          P +     S       +   E 
Sbjct: 573  LGGLYVIGTERHESRRIDNQLRGRSGRQGD--------PGRSKFFLSLDDDLMRIFGGER 624

Query: 2059 ITHFALSTGTFSDPPVRLYTAKKIHHQLERARTEFIQANVAVKKQALLLPKVLH-----Y 2223
            +  F    G     P+   T   ++  +ERA+T+    N  V+K  L    VL+      
Sbjct: 625  LKRFMSRVGMEPGEPI---THSWLNKSIERAQTKVEARNFDVRKHLLEYDDVLNEQRSFI 681

Query: 2224 YAKDAALEL-RHLVELVCETTSETQRKEMAQLQHRLRRR 2337
            YA+ A + +  H+VE V  T  E   +E+  L+  L+RR
Sbjct: 682  YAQRAQILIDEHVVERVYTTIEEYLNREITALRQELKRR 720



to top

>Q9DB52:F122A_MOUSE Protein FAM122A - Mus musculus (Mouse)|
          Length = 284

 Score = 34.3 bits (77), Expect = 2.9
 Identities = 30/97 (30%), Positives = 38/97 (39%)
 Frame = +1

Query: 847  TPRSGSGHSSGNLQLQHRHSQSMLRTREVAVDMSPRFSYCKPTINRDSKMLHRRHSLNLP 1026
            +P  G G   G L    R S S      ++ D SP F    P+  R+S     RH L LP
Sbjct: 17   SPAEGGGPGGGGL----RRSNSAPLIHGLS-DSSPVFQAEAPSARRNSTTFPSRHGLLLP 71

Query: 1027 EHLTRQHSRKTTERTHKATSKSIADLAGEIAALEQEV 1137
                R HS     R H+   +   DL       E+EV
Sbjct: 72   ASPVRMHS----SRLHQIKQEEGMDLINRETVHEREV 104



to top

>Q32KT5:CF136_BOVIN Uncharacterized protein C6orf136 homolog - Bos taurus (Bovine)|
          Length = 315

 Score = 33.9 bits (76), Expect = 3.7
 Identities = 33/100 (33%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
 Frame = +3

Query: 597 TPATPQQQLEVSDPPPSPAATRFLPP-PRLGVFIIVAGASDWNCLLALGNGDNDLEVTRV 773
           T  +P   L  S PPPSP  TR LPP P L +  + A  S W  +L  G G+        
Sbjct: 43  TTTSPSLPLFWSPPPPSP-PTRLLPPAPPLPLPQVQALTSPW-VVLPPGKGE-------- 92

Query: 774 GRFLAGHGEGPEIRDAVGDGVVRRHAKVRVRPLLRQPPAP 893
                  G GPE+     DG         +R L   PP P
Sbjct: 93  ------EGPGPELLSGCLDG---------LRSLFEGPPCP 117



to top

>Q13595:TRA2A_HUMAN Transformer-2 protein homolog - Homo sapiens (Human)|
          Length = 282

 Score = 33.9 bits (76), Expect = 3.7
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
 Frame = +1

Query: 823  SETASCAGTP---RSGSGHSSGNLQLQHRHSQSMLRTREVAVDMSPRFSYCKPTINRDSK 993
            S++ S  GTP   +S S   S +     +HS+S  R+R  +   S R S+ + T +R   
Sbjct: 16   SQSKSPTGTPARVKSESRSGSRSPSRVSKHSESHSRSRSKSRSRSRRHSHRRYTRSRSHS 75

Query: 994  MLHRRHSLN---LPEH---LTRQHSRKTTERTH 1074
              HRR S +    PE+    +R HS  +  R H
Sbjct: 76   HSHRRRSRSRSYTPEYRRRRSRSHSPMSNRRRH 108



to top

>Q6GN15:CCNL1_XENLA Cyclin-L1 - Xenopus laevis (African clawed frog)|
          Length = 496

 Score = 33.9 bits (76), Expect = 3.7
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
 Frame = +1

Query: 799  RARRSGTLSETA-----SCAGTPRSGSGHSSGNLQLQHRHSQSMLRTREVAVDMSPRFSY 963
            R  RSGT S  +     S + +PR    H S +++L+HR     LR R        R   
Sbjct: 389  RRSRSGTYSSRSRSRSRSHSESPRRHHNHGSPHMKLKHRVED--LRGRHA----HKRKKS 442

Query: 964  CKPTINRDSKMLHRRHSLNLPEHLTRQHSRKTTERTHK 1077
              P+ +R+   L ++H      H  R+   ++ ER+HK
Sbjct: 443  HSPSKSREPSELAKKHRHEHGHHRERRERSRSFERSHK 480



to top

>Q92794:MYST3_HUMAN Histone acetyltransferase MYST3 - Homo sapiens (Human)|
          Length = 2004

 Score = 33.5 bits (75), Expect = 4.9
 Identities = 47/197 (23%), Positives = 71/197 (36%), Gaps = 26/197 (13%)
 Frame = +1

Query: 778  GFSPAMERARRSGTLSETASCAGTPRSGSGHSSGNLQLQHRHSQSMLRTREVAVDMSPRF 957
            G  P   + ++S    +     G+ R    +S G+  +    S+S   + E     SPR 
Sbjct: 943  GVEPWRGQLKKSPEALKCRLTEGSERLPRRYSEGDRAVLRGFSES---SEEEEEPESPRS 999

Query: 958  S----YCKPTINRDSKMLHRRHSLNLPEHLTRQHSRKTTERTHKATSKSIADLAG----- 1110
            S      KPT+ R    LHRR  +   +H       +T   T +   +   D        
Sbjct: 1000 SSPPILTKPTLKRKKPFLHRRRRVRKRKHHNSSVVTETISETTEVLDEPFEDSDSERPMP 1059

Query: 1111 ------EIAALEQEVIRKELHLLTLYRRVFDQH-LSDSCSFVSKQVDQEAIKSIDE---- 1257
                  EI   E+E    EL     +RR+  Q  L    S   K  D+E  +  D+    
Sbjct: 1060 RLEPTFEIDEEEEEEDENELFPREYFRRLSSQDVLRCQSSSKRKSKDEEEDEESDDADDT 1119

Query: 1258 ------GALRLRDIKHS 1290
                    LR RD+K+S
Sbjct: 1120 PILKPVSLLRKRDVKNS 1136



to top

>Q8MLV1:LBR_DROME Lamin-B receptor - Drosophila melanogaster (Fruit fly)|
          Length = 741

 Score = 33.1 bits (74), Expect = 6.4
 Identities = 25/98 (25%), Positives = 48/98 (48%)
 Frame = +1

Query: 1051 RKTTERTHKATSKSIADLAGEIAALEQEVIRKELHLLTLYRRVFDQHLSDSCSFVSKQVD 1230
            ++ TER  ++ SK+I++LAG      +E  R   +  ++ R V+D   S   S+ + + D
Sbjct: 214  KRITERLRRSVSKTISNLAGTPVTNTEEGSR---YSRSVSRSVYDDEKSSKRSYSTGEED 270

Query: 1231 QEAIKSIDEGALRLRDIKHSAAFNLPTVSDSMSEVSSR 1344
             +    ++E   R        +FN+   S + +E+S R
Sbjct: 271  IDEEDELEEDQFR--------SFNVTRKSATPAEISCR 300



to top

>Q0PHV7:DACT3_MOUSE Dapper homolog 3 - Mus musculus (Mouse)|
          Length = 610

 Score = 33.1 bits (74), Expect = 6.4
 Identities = 22/55 (40%), Positives = 27/55 (49%)
 Frame = +2

Query: 527 APPAGGSRATRRNEPSLQRAWTADPCNAATAARGERSPALPCRH*VPPSASPGRV 691
           +PP GG+R  R  EPS +RAW      AA  A     PA P     P S + GR+
Sbjct: 290 SPPPGGARPAR--EPSTERAWA-----AAWEAEVPPEPAPPAAASPPSSPAEGRL 337



to top

>Q8WQC0:RGS7_CAEEL Regulator of G-protein signaling rgs-7 - Caenorhabditis elegans|
          Length = 819

 Score = 32.7 bits (73), Expect = 8.3
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 1748 FSSRCIRDLIVSSIFDAYSNLSASICILGTMIMPI 1644
            FS  C+RDL++ ++++  SN +    ILG M  P+
Sbjct: 380  FSENCVRDLLIVTVYEMDSNNAEKKRILGCMTFPV 414



to top

>Q83034:POLG_RTSVA Genome polyprotein [Contains: Putative leader protein; Coat protein 1|
            - Rice tungro spherical virus (strain A) (RTSV) (Rice
            tungro spherical waikavirus)
          Length = 3473

 Score = 32.7 bits (73), Expect = 8.3
 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
 Frame = +1

Query: 1681 ADKFEYASKMLETIRSLIQRLEKIDPTKMTHEEQLCFWI--NIHNA-----LVMHAFLAY 1839
            ADKF    K   +I ++I   EKI        E L  WI  N+        L M A+L +
Sbjct: 1624 ADKFHSIGKKGRSITNIIGGFEKITSVCKKWSETLVSWIVSNVSGGIPKEDLAMTAYLGF 1683

Query: 1840 GIHDKRLKSTDMIL 1881
             IHD   ++ DM L
Sbjct: 1684 KIHDWVRETRDMAL 1697



to top

>Q75LD5:DMI1L_ORYSJ Probable ion channel DMI1-like, chloroplast precursor - Oryza|
           sativa subsp. japonica (Rice)
          Length = 893

 Score = 32.7 bits (73), Expect = 8.3
 Identities = 18/45 (40%), Positives = 21/45 (46%)
 Frame = -1

Query: 832 PSPTASLISGPSPWPARNLPTRVTSRSLSPFPNASKQFQSLAPAT 698
           P P+ S  S P  +P R  P    SRS SP P   +Q Q   P T
Sbjct: 36  PFPSTSRSSNPYSFPDRRPPPTPRSRSRSPLPPPEQQKQQQPPPT 80


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 456,442,311
Number of extensions: 10053892
Number of successful extensions: 32516
Number of sequences better than 10.0: 23
Number of HSP's gapped: 32324
Number of HSP's successfully gapped: 23
Length of query: 912
Length of database: 100,686,439
Length adjustment: 122
Effective length of query: 790
Effective length of database: 67,222,449
Effective search space: 53105734710
Effective search space used: 53105734710
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top