| Clone Name | FLbaf32h14 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT830972.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA248C15, full insert sequence Length = 2267 Score = 535 bits (270), Expect = e-148 Identities = 852/1044 (81%), Gaps = 9/1044 (0%) Strand = Plus / Plus Query: 1249 attgatgagggcgcgctccgtttaagagatatcaagcattctgcagccttcaacttgcca 1308 ||||| ||||| || || ||||| | ||| |||||||| ||||||||||||||||| ||| Sbjct: 1005 attgacgagggtgcccttcgtttgaaagacatcaagcaatctgcagccttcaacttacca 1064 Query: 1309 actgtctcagattctatgagtgaggtatcgtcaagaccggcttcgaagcattctagccta 1368 || ||||||||| ||| ||||||||||| |||| | |||| | |||||| ||||| Sbjct: 1065 acagtctcagatactaaaagtgaggtatc---aagatcaccttcaaggcattccagcctt 1121 Query: 1369 gtgaacttcttgaatgcttctatctcagattacgtacctaagatctcttgcaaactatcg 1428 || |||||||||| ||| ||||| || || || ||||| |||||||||||||||||||| Sbjct: 1122 gttaacttcttgagtgcatctatttctgaatatgtacccaagatctcttgcaaactatca 1181 Query: 1429 gaagacatcctcggctgcattgcttcggtctactgcaagcttgcaagcacaccatctcaa 1488 |||||||| || ||||||| ||| | |||||||| || || | |||| ||| ||| Sbjct: 1182 gaagacattctgagctgcatagctgctgtctactgtaaactcggaagcgtgccactgcaa 1241 Query: 1489 gatgccgagtccgtgacctcaccaagtcattctgtttcatcttcaagtaccttgtcgccg 1548 ||| ||| | | | ||||| || |||| ||||||||||||||||||||| || || ||| Sbjct: 1242 gatagcgaatacataacctcccccagtccttctgtttcatcttcaagtactttttctccg 1301 Query: 1549 aggcgtcgtaatgacagctggagccctcagtacaccttcgatgccaccacaagccctcgc 1608 ||| || ||||| ||||||||||||| ||||| ||||||| |||| | ||||||||| Sbjct: 1302 aggaaccgcaatgatagctggagccctcggtacaacttcgatatcaccccgagccctcgc 1361 Query: 1609 caatatccagaccaaaaagaaaatagtgagaaaaata---taggcatgatcatcgttcca 1665 |||||| | || | ||||| |||| ||| |||| | |||||||||| || || ||| Sbjct: 1362 caatatggatacgagaaagagaataatgaacaaaagaacataggcatgataattgtccca 1421 Query: 1666 aggatacatatagatgctgacaagtttgaatatgcgtcaaaaatgctggagactatcaga 1725 ||||||| |||||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 1422 aggatacgaatagatgctgacaagtttgattacgcctcaaaaatgcttgagactatcagg 1481 Query: 1726 tccctgatacagcgacttgaaaaaatcgatccaacaaagatgacacatgaggagcagctc 1785 |||||||| || || ||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 1482 tccctgattcaacggcttgaaaaaattgacccaacaaagatgacacacgaggagcaactc 1541 Query: 1786 tgcttttggatcaacatccacaatgcgttagtcatgcatgcttttctggcctatgggata 1845 ||||||||||| |||||||||||||| |||||||||||||| ||| ||||||| ||| | Sbjct: 1542 tgcttttggattaacatccacaatgctttagtcatgcatgcatttttggcctacgggctg 1601 Query: 1846 cacgataaacggctgaagagcactgacatgattctgaaggctgcatacaatgtgggtggt 1905 ||||||||||| |||| ||||| |||||||||||||||||||| || ||||| ||||| Sbjct: 1602 cacgataaacgcatgaaaagcacggacatgattctgaaggctgcgtataatgttggtggg 1661 Query: 1906 gaatcagtaaatgcgcaaactattcagaactcgatccttggatgccagtcccaccgtccc 1965 | |||||||| || |||| || |||||||| || || |||||||| ||||| ||||| Sbjct: 1662 cagtcagtaaacgctcaaataatccagaactcaattctaggatgccaatcccatcgtcct 1721 Query: 1966 tcattgtgggttcgcgcgctgttcacgccagcaaaaagatccatggcagggtcgacgacg 2025 || |||||||||| ||||||||| | ||| | || |||||||||||||| ||| | Sbjct: 1722 tcgctgtgggttcgggcgctgttcgcaccaacgaagagatccatggcagg---gacagcc 1778 Query: 2026 aggcacccctacgcccttcaccattccgagccgatcacgcattttgcgctgtccacagga 2085 ||||| || || |||||||| ||| | ||||| | | |||||||| || ||||| ||| Sbjct: 1779 aggcatccatatgcccttcagcatccagagccagttgctcattttgccctctccactgga 1838 Query: 2086 acattttcagacccgcccgtgcggctttacacggccaagaagatccaccaccagctggag 2145 |||||||||| || || ||| |||| |||| || |||||||| ||||| ||||||||| Sbjct: 1839 gcattttcagatccacctgtgaggctgtacagtgcgaagaagatacaccagcagctggag 1898 Query: 2146 cgagcccggaccgagttcatccaggccaacgtcgcggtgaagaagcaggccctcctgctg 2205 || |||| |||||||||||||| ||||| | || || || |||||| || ||||| Sbjct: 1899 gtggcgaggacggagttcatccaggcgaacgtggtggcgaggaggcaggcgctgatgctg 1958 Query: 2206 cccaaggtgctccactactatgccaaggacgcggcgctcgagctgcgccacctcgtggag 2265 ||||||||||| |||||||| ||||||||||||||||| |||||||| || | |||||| Sbjct: 1959 cccaaggtgctgcactactacgccaaggacgcggcgctggagctgcggcatgtggtggag 2018 Query: 2266 ctggtgtgcgagaccacctcggag 2289 ||||||||||||| || ||||||| Sbjct: 2019 ctggtgtgcgagagcatctcggag 2042 Score = 131 bits (66), Expect = 1e-26 Identities = 84/90 (93%) Strand = Plus / Plus Query: 2326 ctcaggagaaggatcgacaagtgcgtggagtggctgccctacaagtccaacttcagatat 2385 |||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 2070 ctcaggaggaggatcgacaagtgcgtcgagtggctgccctacaagtcctccttcagatac 2129 Query: 2386 gttgtacatagggatctggccgagtaggca 2415 |||||||||||||| ||||||||||||||| Sbjct: 2130 gttgtacatagggacctggccgagtaggca 2159 Score = 89.7 bits (45), Expect = 5e-14 Identities = 153/189 (80%) Strand = Plus / Plus Query: 1000 cacagaagacactcgcttaacttgccagagcatttgactcgccaacactccaggaaaaca 1059 ||||||||| ||| ||||||||||||||||| || | |||| ||||||||| | | Sbjct: 759 cacagaagattctcacttaacttgccagagcaaatgccaggccattactccaggacagta 818 Query: 1060 accgaaagaactcacaaggcaacttcaaagtccatcgcagatttagctggggagatcgcg 1119 || ||||||| ||| ||||| |||||||||||||| ||||| ||| | |||||| ||| Sbjct: 819 actgaaagaaatcaaaaggctgcttcaaagtccatcacagatctagtcgtggagattgcg 878 Query: 1120 gccctcgagcaggaggtcatccgcaaggaactgcatctactgaccctctacagaagggta 1179 ||||| |||||||| ||| |||| |||||| ||||||| || ||||||| |||| | | Sbjct: 879 gcccttgagcaggaagtcgtccgaaaggaattgcatctgctatccctctatagaaaagca 938 Query: 1180 tttgatcag 1188 ||||||||| Sbjct: 939 tttgatcag 947
>ref|NM_001070079.1| Oryza sativa (japonica cultivar-group) Os09g0493400 (Os09g0493400) mRNA, complete cds Length = 2425 Score = 535 bits (270), Expect = e-148 Identities = 852/1044 (81%), Gaps = 9/1044 (0%) Strand = Plus / Plus Query: 1249 attgatgagggcgcgctccgtttaagagatatcaagcattctgcagccttcaacttgcca 1308 ||||| ||||| || || ||||| | ||| |||||||| ||||||||||||||||| ||| Sbjct: 1029 attgacgagggtgcccttcgtttgaaagacatcaagcaatctgcagccttcaacttacca 1088 Query: 1309 actgtctcagattctatgagtgaggtatcgtcaagaccggcttcgaagcattctagccta 1368 | ||||||||| ||| ||||||||||| |||| | |||| | |||||| ||||| Sbjct: 1089 atagtctcagatactaaaagtgaggtatc---aagatcaccttcaaggcattccagcctt 1145 Query: 1369 gtgaacttcttgaatgcttctatctcagattacgtacctaagatctcttgcaaactatcg 1428 || |||||||||| ||| ||||| || || || ||||| |||||||||||||||||||| Sbjct: 1146 gttaacttcttgagtgcatctatttctgaatatgtacccaagatctcttgcaaactatca 1205 Query: 1429 gaagacatcctcggctgcattgcttcggtctactgcaagcttgcaagcacaccatctcaa 1488 |||||||| || ||||||| ||| | |||||||| || || | |||| ||| ||| Sbjct: 1206 gaagacattctgagctgcatagctgctgtctactgtaaactcggaagcgtgccactgcaa 1265 Query: 1489 gatgccgagtccgtgacctcaccaagtcattctgtttcatcttcaagtaccttgtcgccg 1548 ||| ||| | | | ||||| || |||| ||||||||||||||||||||| || || ||| Sbjct: 1266 gatagcgaatacataacctcccccagtccttctgtttcatcttcaagtactttttctccg 1325 Query: 1549 aggcgtcgtaatgacagctggagccctcagtacaccttcgatgccaccacaagccctcgc 1608 ||| || ||||| ||||||||||||| ||||| ||||||| |||| | ||||||||| Sbjct: 1326 aggaaccgcaatgatagctggagccctcggtacaacttcgatatcaccccgagccctcgc 1385 Query: 1609 caatatccagaccaaaaagaaaatagtgagaaaaata---taggcatgatcatcgttcca 1665 |||||| | || | ||||| |||| ||| |||| | |||||||||| || || ||| Sbjct: 1386 caatatggatacgagaaagagaataatgaacaaaagaacataggcatgataattgtccca 1445 Query: 1666 aggatacatatagatgctgacaagtttgaatatgcgtcaaaaatgctggagactatcaga 1725 ||||||| |||||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 1446 aggatacgaatagatgctgacaagtttgattacgcctcaaaaatgcttgagactatcagg 1505 Query: 1726 tccctgatacagcgacttgaaaaaatcgatccaacaaagatgacacatgaggagcagctc 1785 |||||||| || || ||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 1506 tccctgattcaacggcttgaaaaaattgacccaacaaagatgacacacgaggagcaactc 1565 Query: 1786 tgcttttggatcaacatccacaatgcgttagtcatgcatgcttttctggcctatgggata 1845 ||||||||||| |||||||||||||| |||||||||||||| ||| ||||||| ||| | Sbjct: 1566 tgcttttggattaacatccacaatgctttagtcatgcatgcatttttggcctacgggctg 1625 Query: 1846 cacgataaacggctgaagagcactgacatgattctgaaggctgcatacaatgtgggtggt 1905 ||||||||||| |||| ||||| |||||||||||||||||||| || ||||| ||||| Sbjct: 1626 cacgataaacgcatgaaaagcacggacatgattctgaaggctgcgtataatgttggtggg 1685 Query: 1906 gaatcagtaaatgcgcaaactattcagaactcgatccttggatgccagtcccaccgtccc 1965 | |||||||| || |||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1686 cagtcagtaaacgctcaaataatccagaactcaattcttggatgccaatcccatcgtcct 1745 Query: 1966 tcattgtgggttcgcgcgctgttcacgccagcaaaaagatccatggcagggtcgacgacg 2025 || |||||||||| ||||||||| | ||| | || |||||||||||||| ||| | Sbjct: 1746 tcgctgtgggttcgggcgctgttcgcaccaacgaagagatccatggcagg---gacagcc 1802 Query: 2026 aggcacccctacgcccttcaccattccgagccgatcacgcattttgcgctgtccacagga 2085 ||||| || || |||||||| ||| | ||||| | | |||||||| || ||||| ||| Sbjct: 1803 aggcatccatatgcccttcagcatccagagccagttgctcattttgccctctccactgga 1862 Query: 2086 acattttcagacccgcccgtgcggctttacacggccaagaagatccaccaccagctggag 2145 |||||||||| || || ||| |||| |||| || |||||||| ||||| ||||||||| Sbjct: 1863 gcattttcagatccacctgtgaggctgtacagtgcgaagaagatacaccagcagctggag 1922 Query: 2146 cgagcccggaccgagttcatccaggccaacgtcgcggtgaagaagcaggccctcctgctg 2205 || |||| |||||||||||||| ||||| | || || || |||||| || ||||| Sbjct: 1923 gtggcgaggacggagttcatccaggcgaacgtggtggcgaggaggcaggcgctgatgctg 1982 Query: 2206 cccaaggtgctccactactatgccaaggacgcggcgctcgagctgcgccacctcgtggag 2265 ||||||||||| |||||||| ||||||||||||||||| |||||||| || | |||||| Sbjct: 1983 cccaaggtgctgcactactacgccaaggacgcggcgctggagctgcggcatgtggtggag 2042 Query: 2266 ctggtgtgcgagaccacctcggag 2289 ||||||||||||| || ||||||| Sbjct: 2043 ctggtgtgcgagagcatctcggag 2066 Score = 131 bits (66), Expect = 1e-26 Identities = 84/90 (93%) Strand = Plus / Plus Query: 2326 ctcaggagaaggatcgacaagtgcgtggagtggctgccctacaagtccaacttcagatat 2385 |||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 2094 ctcaggaggaggatcgacaagtgcgtcgagtggctgccctacaagtcctccttcagatac 2153 Query: 2386 gttgtacatagggatctggccgagtaggca 2415 |||||||||||||| ||||||||||||||| Sbjct: 2154 gttgtacatagggacctggccgagtaggca 2183 Score = 97.6 bits (49), Expect = 2e-16 Identities = 154/189 (81%) Strand = Plus / Plus Query: 1000 cacagaagacactcgcttaacttgccagagcatttgactcgccaacactccaggaaaaca 1059 ||||||||| ||| |||||||||||||||||| || | |||| ||||||||| | | Sbjct: 783 cacagaagattctcacttaacttgccagagcatatgccaggccattactccaggacagta 842 Query: 1060 accgaaagaactcacaaggcaacttcaaagtccatcgcagatttagctggggagatcgcg 1119 || ||||||| ||| ||||| |||||||||||||| ||||| ||| | |||||| ||| Sbjct: 843 actgaaagaaatcaaaaggctgcttcaaagtccatcacagatctagtcgtggagattgcg 902 Query: 1120 gccctcgagcaggaggtcatccgcaaggaactgcatctactgaccctctacagaagggta 1179 ||||| |||||||| ||| |||| |||||| ||||||| || ||||||| |||| | | Sbjct: 903 gcccttgagcaggaagtcgtccgaaaggaattgcatctgctatccctctatagaaaagca 962 Query: 1180 tttgatcag 1188 ||||||||| Sbjct: 963 tttgatcag 971
>dbj|AK102021.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080J10, full insert sequence Length = 2426 Score = 535 bits (270), Expect = e-148 Identities = 852/1044 (81%), Gaps = 9/1044 (0%) Strand = Plus / Plus Query: 1249 attgatgagggcgcgctccgtttaagagatatcaagcattctgcagccttcaacttgcca 1308 ||||| ||||| || || ||||| | ||| |||||||| ||||||||||||||||| ||| Sbjct: 1030 attgacgagggtgcccttcgtttgaaagacatcaagcaatctgcagccttcaacttacca 1089 Query: 1309 actgtctcagattctatgagtgaggtatcgtcaagaccggcttcgaagcattctagccta 1368 | ||||||||| ||| ||||||||||| |||| | |||| | |||||| ||||| Sbjct: 1090 atagtctcagatactaaaagtgaggtatc---aagatcaccttcaaggcattccagcctt 1146 Query: 1369 gtgaacttcttgaatgcttctatctcagattacgtacctaagatctcttgcaaactatcg 1428 || |||||||||| ||| ||||| || || || ||||| |||||||||||||||||||| Sbjct: 1147 gttaacttcttgagtgcatctatttctgaatatgtacccaagatctcttgcaaactatca 1206 Query: 1429 gaagacatcctcggctgcattgcttcggtctactgcaagcttgcaagcacaccatctcaa 1488 |||||||| || ||||||| ||| | |||||||| || || | |||| ||| ||| Sbjct: 1207 gaagacattctgagctgcatagctgctgtctactgtaaactcggaagcgtgccactgcaa 1266 Query: 1489 gatgccgagtccgtgacctcaccaagtcattctgtttcatcttcaagtaccttgtcgccg 1548 ||| ||| | | | ||||| || |||| ||||||||||||||||||||| || || ||| Sbjct: 1267 gatagcgaatacataacctcccccagtccttctgtttcatcttcaagtactttttctccg 1326 Query: 1549 aggcgtcgtaatgacagctggagccctcagtacaccttcgatgccaccacaagccctcgc 1608 ||| || ||||| ||||||||||||| ||||| ||||||| |||| | ||||||||| Sbjct: 1327 aggaaccgcaatgatagctggagccctcggtacaacttcgatatcaccccgagccctcgc 1386 Query: 1609 caatatccagaccaaaaagaaaatagtgagaaaaata---taggcatgatcatcgttcca 1665 |||||| | || | ||||| |||| ||| |||| | |||||||||| || || ||| Sbjct: 1387 caatatggatacgagaaagagaataatgaacaaaagaacataggcatgataattgtccca 1446 Query: 1666 aggatacatatagatgctgacaagtttgaatatgcgtcaaaaatgctggagactatcaga 1725 ||||||| |||||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 1447 aggatacgaatagatgctgacaagtttgattacgcctcaaaaatgcttgagactatcagg 1506 Query: 1726 tccctgatacagcgacttgaaaaaatcgatccaacaaagatgacacatgaggagcagctc 1785 |||||||| || || ||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 1507 tccctgattcaacggcttgaaaaaattgacccaacaaagatgacacacgaggagcaactc 1566 Query: 1786 tgcttttggatcaacatccacaatgcgttagtcatgcatgcttttctggcctatgggata 1845 ||||||||||| |||||||||||||| |||||||||||||| ||| ||||||| ||| | Sbjct: 1567 tgcttttggattaacatccacaatgctttagtcatgcatgcatttttggcctacgggctg 1626 Query: 1846 cacgataaacggctgaagagcactgacatgattctgaaggctgcatacaatgtgggtggt 1905 ||||||||||| |||| ||||| |||||||||||||||||||| || ||||| ||||| Sbjct: 1627 cacgataaacgcatgaaaagcacggacatgattctgaaggctgcgtataatgttggtggg 1686 Query: 1906 gaatcagtaaatgcgcaaactattcagaactcgatccttggatgccagtcccaccgtccc 1965 | |||||||| || |||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 1687 cagtcagtaaacgctcaaataatccagaactcaattcttggatgccaatcccatcgtcct 1746 Query: 1966 tcattgtgggttcgcgcgctgttcacgccagcaaaaagatccatggcagggtcgacgacg 2025 || |||||||||| ||||||||| | ||| | || |||||||||||||| ||| | Sbjct: 1747 tcgctgtgggttcgggcgctgttcgcaccaacgaagagatccatggcagg---gacagcc 1803 Query: 2026 aggcacccctacgcccttcaccattccgagccgatcacgcattttgcgctgtccacagga 2085 ||||| || || |||||||| ||| | ||||| | | |||||||| || ||||| ||| Sbjct: 1804 aggcatccatatgcccttcagcatccagagccagttgctcattttgccctctccactgga 1863 Query: 2086 acattttcagacccgcccgtgcggctttacacggccaagaagatccaccaccagctggag 2145 |||||||||| || || ||| |||| |||| || |||||||| ||||| ||||||||| Sbjct: 1864 gcattttcagatccacctgtgaggctgtacagtgcgaagaagatacaccagcagctggag 1923 Query: 2146 cgagcccggaccgagttcatccaggccaacgtcgcggtgaagaagcaggccctcctgctg 2205 || |||| |||||||||||||| ||||| | || || || |||||| || ||||| Sbjct: 1924 gtggcgaggacggagttcatccaggcgaacgtggtggcgaggaggcaggcgctgatgctg 1983 Query: 2206 cccaaggtgctccactactatgccaaggacgcggcgctcgagctgcgccacctcgtggag 2265 ||||||||||| |||||||| ||||||||||||||||| |||||||| || | |||||| Sbjct: 1984 cccaaggtgctgcactactacgccaaggacgcggcgctggagctgcggcatgtggtggag 2043 Query: 2266 ctggtgtgcgagaccacctcggag 2289 ||||||||||||| || ||||||| Sbjct: 2044 ctggtgtgcgagagcatctcggag 2067 Score = 131 bits (66), Expect = 1e-26 Identities = 84/90 (93%) Strand = Plus / Plus Query: 2326 ctcaggagaaggatcgacaagtgcgtggagtggctgccctacaagtccaacttcagatat 2385 |||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 2095 ctcaggaggaggatcgacaagtgcgtcgagtggctgccctacaagtcctccttcagatac 2154 Query: 2386 gttgtacatagggatctggccgagtaggca 2415 |||||||||||||| ||||||||||||||| Sbjct: 2155 gttgtacatagggacctggccgagtaggca 2184 Score = 97.6 bits (49), Expect = 2e-16 Identities = 154/189 (81%) Strand = Plus / Plus Query: 1000 cacagaagacactcgcttaacttgccagagcatttgactcgccaacactccaggaaaaca 1059 ||||||||| ||| |||||||||||||||||| || | |||| ||||||||| | | Sbjct: 784 cacagaagattctcacttaacttgccagagcatatgccaggccattactccaggacagta 843 Query: 1060 accgaaagaactcacaaggcaacttcaaagtccatcgcagatttagctggggagatcgcg 1119 || ||||||| ||| ||||| |||||||||||||| ||||| ||| | |||||| ||| Sbjct: 844 actgaaagaaatcaaaaggctgcttcaaagtccatcacagatctagtcgtggagattgcg 903 Query: 1120 gccctcgagcaggaggtcatccgcaaggaactgcatctactgaccctctacagaagggta 1179 ||||| |||||||| ||| |||| |||||| ||||||| || ||||||| |||| | | Sbjct: 904 gcccttgagcaggaagtcgtccgaaaggaattgcatctgctatccctctatagaaaagca 963 Query: 1180 tttgatcag 1188 ||||||||| Sbjct: 964 tttgatcag 972
>ref|NM_001068769.1| Oryza sativa (japonica cultivar-group) Os08g0515700 (Os08g0515700) mRNA, complete cds Length = 2161 Score = 214 bits (108), Expect = 1e-51 Identities = 249/296 (84%) Strand = Plus / Plus Query: 1663 ccaaggatacatatagatgctgacaagtttgaatatgcgtcaaaaatgctggagactatc 1722 ||||||||| |||| ||||| || |||||||||||||| || |||||||| |||||| || Sbjct: 1225 ccaaggatatatatggatgcagaaaagtttgaatatgcctctaaaatgctagagactgtc 1284 Query: 1723 agatccctgatacagcgacttgaaaaaatcgatccaacaaagatgacacatgaggagcag 1782 ||||| |||||| | |||||||| ||||| || |||||||| ||| ||||||| |||||| Sbjct: 1285 agatcgctgataaaacgacttgagaaaattgacccaacaaaaatggcacatgaagagcag 1344 Query: 1783 ctctgcttttggatcaacatccacaatgcgttagtcatgcatgcttttctggcctatggg 1842 ||||| |||||||||||||||||||| || || || |||||||||||| |||| ||||| Sbjct: 1345 ctctgtttttggatcaacatccacaacgctttggtgatgcatgcttttatggcttatgga 1404 Query: 1843 atacacgataaacggctgaagagcactgacatgattctgaaggctgcatacaatgtgggt 1902 | || || ||||| |||| | ||| ||||||||||||||||||||||| ||||||||| Sbjct: 1405 cttcaggagaaacgcatgaaaaacacagacatgattctgaaggctgcatataatgtgggt 1464 Query: 1903 ggtgaatcagtaaatgcgcaaactattcagaactcgatccttggatgccagtccca 1958 || |||||||| || |||| ||| |||||||| || |||||||||| ||||| Sbjct: 1465 gggctttcagtaaacgcccaaattatccagaactcaattattggatgccaatccca 1520 Score = 56.0 bits (28), Expect = 7e-04 Identities = 97/120 (80%) Strand = Plus / Plus Query: 1357 cattctagcctagtgaacttcttgaatgcttctatctcagattacgtacctaagatctct 1416 ||||||||||| | || ||||||| |||||| ||| | || || || || ||||||||| Sbjct: 913 cattctagccttgcaaatttcttgagtgcttcaatcgctgaatatgtgccaaagatctct 972 Query: 1417 tgcaaactatcggaagacatcctcggctgcattgcttcggtctactgcaagcttgcaagc 1476 |||||||| ||||| |||||| | | |||||| || | || |||||||| ||||||||| Sbjct: 973 tgcaaactttcggaggacatcgtaagatgcatttctgcagtatactgcaaacttgcaagc 1032
>dbj|AK067628.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113J20, full insert sequence Length = 2165 Score = 214 bits (108), Expect = 1e-51 Identities = 249/296 (84%) Strand = Plus / Plus Query: 1663 ccaaggatacatatagatgctgacaagtttgaatatgcgtcaaaaatgctggagactatc 1722 ||||||||| |||| ||||| || |||||||||||||| || |||||||| |||||| || Sbjct: 1226 ccaaggatatatatggatgcagaaaagtttgaatatgcctctaaaatgctagagactgtc 1285 Query: 1723 agatccctgatacagcgacttgaaaaaatcgatccaacaaagatgacacatgaggagcag 1782 ||||| |||||| | |||||||| ||||| || |||||||| ||| ||||||| |||||| Sbjct: 1286 agatcgctgataaaacgacttgagaaaattgacccaacaaaaatggcacatgaagagcag 1345 Query: 1783 ctctgcttttggatcaacatccacaatgcgttagtcatgcatgcttttctggcctatggg 1842 ||||| |||||||||||||||||||| || || || |||||||||||| |||| ||||| Sbjct: 1346 ctctgtttttggatcaacatccacaacgctttggtgatgcatgcttttatggcttatgga 1405 Query: 1843 atacacgataaacggctgaagagcactgacatgattctgaaggctgcatacaatgtgggt 1902 | || || ||||| |||| | ||| ||||||||||||||||||||||| ||||||||| Sbjct: 1406 cttcaggagaaacgcatgaaaaacacagacatgattctgaaggctgcatataatgtgggt 1465 Query: 1903 ggtgaatcagtaaatgcgcaaactattcagaactcgatccttggatgccagtccca 1958 || |||||||| || |||| ||| |||||||| || |||||||||| ||||| Sbjct: 1466 gggctttcagtaaacgcccaaattatccagaactcaattattggatgccaatccca 1521 Score = 56.0 bits (28), Expect = 7e-04 Identities = 97/120 (80%) Strand = Plus / Plus Query: 1357 cattctagcctagtgaacttcttgaatgcttctatctcagattacgtacctaagatctct 1416 ||||||||||| | || ||||||| |||||| ||| | || || || || ||||||||| Sbjct: 914 cattctagccttgcaaatttcttgagtgcttcaatcgctgaatatgtgccaaagatctct 973 Query: 1417 tgcaaactatcggaagacatcctcggctgcattgcttcggtctactgcaagcttgcaagc 1476 |||||||| ||||| |||||| | | |||||| || | || |||||||| ||||||||| Sbjct: 974 tgcaaactttcggaggacatcgtaagatgcatttctgcagtatactgcaaacttgcaagc 1033
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 163 bits (82), Expect = 4e-36 Identities = 300/372 (80%), Gaps = 3/372 (0%) Strand = Plus / Plus Query: 1356 gcattctagcctagtgaacttcttgaatgcttctatctcagattacgtacctaagatctc 1415 |||||| ||||| || |||||||||| ||| ||||| || || || ||||| |||||||| Sbjct: 18815403 gcattccagccttgttaacttcttgagtgcatctatttctgaatatgtacccaagatctc 18815462 Query: 1416 ttgcaaactatcggaagacatcctcggctgcattgcttcggtctactgcaagcttgcaag 1475 |||||||||||| |||||||| || ||||||| ||| | |||||||| || || | ||| Sbjct: 18815463 ttgcaaactatcagaagacattctgagctgcatagctgctgtctactgtaaactcggaag 18815522 Query: 1476 cacaccatctcaagatgccgagtccgtgacctcaccaagtcattctgtttcatcttcaag 1535 | ||| |||||| ||| | | | ||||| || |||| |||||||||||||||||| Sbjct: 18815523 cgtgccactgcaagatagcgaatacataacctcccccagtccttctgtttcatcttcaag 18815582 Query: 1536 taccttgtcgccgaggcgtcgtaatgacagctggagccctcagtacaccttcgatgccac 1595 ||| || || |||||| || ||||| ||||||||||||| ||||| ||||||| ||| Sbjct: 18815583 tactttttctccgaggaaccgcaatgatagctggagccctcggtacaacttcgatatcac 18815642 Query: 1596 cacaagccctcgccaatatccagaccaaaaagaaaatagtgagaaaaata---taggcat 1652 | | ||||||||||||||| | || | ||||| |||| ||| |||| | ||||||| Sbjct: 18815643 cccgagccctcgccaatatggatacgagaaagagaataatgaacaaaagaacataggcat 18815702 Query: 1653 gatcatcgttccaaggatacatatagatgctgacaagtttgaatatgcgtcaaaaatgct 1712 ||| || || |||||||||| |||||||||||||||||||| || || ||||||||||| Sbjct: 18815703 gataattgtcccaaggatacgaatagatgctgacaagtttgattacgcctcaaaaatgct 18815762 Query: 1713 ggagactatcag 1724 ||||||||||| Sbjct: 18815763 tgagactatcag 18815774 Score = 131 bits (66), Expect = 1e-26 Identities = 84/90 (93%) Strand = Plus / Plus Query: 2326 ctcaggagaaggatcgacaagtgcgtggagtggctgccctacaagtccaacttcagatat 2385 |||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 18817101 ctcaggaggaggatcgacaagtgcgtcgagtggctgccctacaagtcctccttcagatac 18817160 Query: 2386 gttgtacatagggatctggccgagtaggca 2415 |||||||||||||| ||||||||||||||| Sbjct: 18817161 gttgtacatagggacctggccgagtaggca 18817190 Score = 127 bits (64), Expect = 2e-25 Identities = 91/100 (91%) Strand = Plus / Plus Query: 1726 tccctgatacagcgacttgaaaaaatcgatccaacaaagatgacacatgaggagcagctc 1785 |||||||| || || ||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 18815897 tccctgattcaacggcttgaaaaaattgacccaacaaagatgacacacgaggagcaactc 18815956 Query: 1786 tgcttttggatcaacatccacaatgcgttagtcatgcatg 1825 ||||||||||| |||||||||||||| ||||||||||||| Sbjct: 18815957 tgcttttggattaacatccacaatgctttagtcatgcatg 18815996 Score = 127 bits (64), Expect = 2e-25 Identities = 142/168 (84%) Strand = Plus / Plus Query: 2122 aagaagatccaccaccagctggagcgagcccggaccgagttcatccaggccaacgtcgcg 2181 |||||||| ||||| ||||||||| || |||| |||||||||||||| ||||| | | Sbjct: 18816906 aagaagatacaccagcagctggaggtggcgaggacggagttcatccaggcgaacgtggtg 18816965 Query: 2182 gtgaagaagcaggccctcctgctgcccaaggtgctccactactatgccaaggacgcggcg 2241 | || || |||||| || |||||||||||||||| |||||||| ||||||||||||||| Sbjct: 18816966 gcgaggaggcaggcgctgatgctgcccaaggtgctgcactactacgccaaggacgcggcg 18817025 Query: 2242 ctcgagctgcgccacctcgtggagctggtgtgcgagaccacctcggag 2289 || |||||||| || | ||||||||||||||||||| || ||||||| Sbjct: 18817026 ctggagctgcggcatgtggtggagctggtgtgcgagagcatctcggag 18817073 Score = 56.0 bits (28), Expect = 7e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 1249 attgatgagggcgcgctccgtttaagagatatcaagcattctgcagccttcaacttgcca 1308 ||||| ||||| || || ||||| | ||| |||||||| ||||||||||||||||| ||| Sbjct: 18815175 attgacgagggtgcccttcgtttgaaagacatcaagcaatctgcagccttcaacttacca 18815234 Query: 1309 actgtctcagat 1320 | ||||||||| Sbjct: 18815235 atagtctcagat 18815246 Score = 52.0 bits (26), Expect = 0.011 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1832 tggcctatgggatacacgataaacggctgaagagcactgacatgattctgaagg 1885 ||||||| ||| | ||||||||||| |||| ||||| |||||||||||||||| Sbjct: 18816106 tggcctacgggctgcacgataaacgcatgaaaagcacggacatgattctgaagg 18816159 Score = 44.1 bits (22), Expect = 2.7 Identities = 73/90 (81%) Strand = Plus / Plus Query: 1000 cacagaagacactcgcttaacttgccagagcatttgactcgccaacactccaggaaaaca 1059 ||||||||| ||| |||||||||||||||||| || | |||| ||||||||| | | Sbjct: 18814550 cacagaagattctcacttaacttgccagagcatatgccaggccattactccaggacagta 18814609 Query: 1060 accgaaagaactcacaaggcaacttcaaag 1089 || ||||||| ||| ||||| |||||||| Sbjct: 18814610 actgaaagaaatcaaaaggctgcttcaaag 18814639 Score = 44.1 bits (22), Expect = 2.7 Identities = 67/82 (81%) Strand = Plus / Plus Query: 1883 aggctgcatacaatgtgggtggtgaatcagtaaatgcgcaaactattcagaactcgatcc 1942 ||||||| || ||||| ||||| | |||||||| || |||| || |||||||| || | Sbjct: 18816238 aggctgcgtataatgttggtgggcagtcagtaaacgctcaaataatccagaactcaattc 18816297 Query: 1943 ttggatgccagtcccaccgtcc 1964 |||||||||| ||||| ||||| Sbjct: 18816298 ttggatgccaatcccatcgtcc 18816319 Score = 44.1 bits (22), Expect = 2.7 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1971 gtgggttcgcgcgctgttcacgccagcaaaaagatccatggcaggg 2016 ||||||||| ||||||||| | ||| | || ||||||||||||||| Sbjct: 18816510 gtgggttcgggcgctgttcgcaccaacgaagagatccatggcaggg 18816555
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 97.6 bits (49), Expect = 2e-16 Identities = 91/105 (86%) Strand = Plus / Plus Query: 1721 tcagatccctgatacagcgacttgaaaaaatcgatccaacaaagatgacacatgaggagc 1780 ||||||| |||||| | |||||||| ||||| || |||||||| ||| ||||||| |||| Sbjct: 25580499 tcagatcgctgataaaacgacttgagaaaattgacccaacaaaaatggcacatgaagagc 25580558 Query: 1781 agctctgcttttggatcaacatccacaatgcgttagtcatgcatg 1825 ||||||| |||||||||||||||||||| || || || ||||||| Sbjct: 25580559 agctctgtttttggatcaacatccacaacgctttggtgatgcatg 25580603 Score = 60.0 bits (30), Expect = 4e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 1663 ccaaggatacatatagatgctgacaagtttgaatatgcgtcaaaaatgctggagactatc 1722 ||||||||| |||| ||||| || |||||||||||||| || |||||||| |||||| || Sbjct: 25580360 ccaaggatatatatggatgcagaaaagtttgaatatgcctctaaaatgctagagactgtc 25580419 Query: 1723 ag 1724 || Sbjct: 25580420 ag 25580421 Score = 56.0 bits (28), Expect = 7e-04 Identities = 97/120 (80%) Strand = Plus / Plus Query: 1357 cattctagcctagtgaacttcttgaatgcttctatctcagattacgtacctaagatctct 1416 ||||||||||| | || ||||||| |||||| ||| | || || || || ||||||||| Sbjct: 25580048 cattctagccttgcaaatttcttgagtgcttcaatcgctgaatatgtgccaaagatctct 25580107 Query: 1417 tgcaaactatcggaagacatcctcggctgcattgcttcggtctactgcaagcttgcaagc 1476 |||||||| ||||| |||||| | | |||||| || | || |||||||| ||||||||| Sbjct: 25580108 tgcaaactttcggaggacatcgtaagatgcatttctgcagtatactgcaaacttgcaagc 25580167 Score = 48.1 bits (24), Expect = 0.17 Identities = 63/76 (82%) Strand = Plus / Plus Query: 1883 aggctgcatacaatgtgggtggtgaatcagtaaatgcgcaaactattcagaactcgatcc 1942 |||||||||| ||||||||||| |||||||| || |||| ||| |||||||| || Sbjct: 25580879 aggctgcatataatgtgggtgggctttcagtaaacgcccaaattatccagaactcaatta 25580938 Query: 1943 ttggatgccagtccca 1958 |||||||||| ||||| Sbjct: 25580939 ttggatgccaatccca 25580954 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1104 agctggggagatcgcggccctc 1125 |||||||||||||||||||||| Sbjct: 14028679 agctggggagatcgcggccctc 14028700
>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686C03 Length = 164529 Score = 97.6 bits (49), Expect = 2e-16 Identities = 91/105 (86%) Strand = Plus / Plus Query: 1721 tcagatccctgatacagcgacttgaaaaaatcgatccaacaaagatgacacatgaggagc 1780 ||||||| |||||| | |||||||| ||||| || |||||||| ||| ||||||| |||| Sbjct: 67190 tcagatcgctgataaaacgacttgagaaaattgacccaacaaaaatggcacatgaagagc 67249 Query: 1781 agctctgcttttggatcaacatccacaatgcgttagtcatgcatg 1825 ||||||| |||||||||||||||||||| || || || ||||||| Sbjct: 67250 agctctgtttttggatcaacatccacaacgctttggtgatgcatg 67294 Score = 60.0 bits (30), Expect = 4e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 1663 ccaaggatacatatagatgctgacaagtttgaatatgcgtcaaaaatgctggagactatc 1722 ||||||||| |||| ||||| || |||||||||||||| || |||||||| |||||| || Sbjct: 67051 ccaaggatatatatggatgcagaaaagtttgaatatgcctctaaaatgctagagactgtc 67110 Query: 1723 ag 1724 || Sbjct: 67111 ag 67112 Score = 56.0 bits (28), Expect = 7e-04 Identities = 97/120 (80%) Strand = Plus / Plus Query: 1357 cattctagcctagtgaacttcttgaatgcttctatctcagattacgtacctaagatctct 1416 ||||||||||| | || ||||||| |||||| ||| | || || || || ||||||||| Sbjct: 66739 cattctagccttgcaaatttcttgagtgcttcaatcgctgaatatgtgccaaagatctct 66798 Query: 1417 tgcaaactatcggaagacatcctcggctgcattgcttcggtctactgcaagcttgcaagc 1476 |||||||| ||||| |||||| | | |||||| || | || |||||||| ||||||||| Sbjct: 66799 tgcaaactttcggaggacatcgtaagatgcatttctgcagtatactgcaaacttgcaagc 66858 Score = 48.1 bits (24), Expect = 0.17 Identities = 63/76 (82%) Strand = Plus / Plus Query: 1883 aggctgcatacaatgtgggtggtgaatcagtaaatgcgcaaactattcagaactcgatcc 1942 |||||||||| ||||||||||| |||||||| || |||| ||| |||||||| || Sbjct: 67570 aggctgcatataatgtgggtgggctttcagtaaacgcccaaattatccagaactcaatta 67629 Query: 1943 ttggatgccagtccca 1958 |||||||||| ||||| Sbjct: 67630 ttggatgccaatccca 67645
>dbj|AK059091.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B12, full insert sequence Length = 1225 Score = 56.0 bits (28), Expect = 7e-04 Identities = 97/120 (80%) Strand = Plus / Minus Query: 1357 cattctagcctagtgaacttcttgaatgcttctatctcagattacgtacctaagatctct 1416 ||||||||||| | || ||||||| |||||| ||| | || || || || ||||||||| Sbjct: 196 cattctagccttgcaaatttcttgagtgcttcaatcgctgaatatgtgccaaagatctct 137 Query: 1417 tgcaaactatcggaagacatcctcggctgcattgcttcggtctactgcaagcttgcaagc 1476 |||||||| ||||| |||||| | | |||||| || | || |||||||| ||||||||| Sbjct: 136 tgcaaactttcggaggacatcgtaagatgcatttctgcagtatactgcaaacttgcaagc 77
>gb|AC097382.3| Homo sapiens BAC clone RP11-367J11 from 4, complete sequence Length = 210515 Score = 46.1 bits (23), Expect = 0.67 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2498 catggtgtggtgtgtaagtgtgt 2520 ||||||||||||||||||||||| Sbjct: 145573 catggtgtggtgtgtaagtgtgt 145595
>gb|DQ672601.1| Lycopersicon esculentum cultivar Ailsa Craig leucine-rich repeat family protein, putative polyprotein, auxin repressed/dormancy associated protein, putative zinc finger protein, putative protease/hydrolase, mitochondrial amino acid carrier, squamosa promoter binding-like protein, putative retroelement pol polyprotein, and Dof zinc finger protein genes, complete cds Length = 94860 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2657 ttagagaaaattgacagtctta 2678 |||||||||||||||||||||| Sbjct: 18604 ttagagaaaattgacagtctta 18625
>ref|XM_632484.1| Dictyostelium discoideum AX4 3-phosphatidylinositol 3-phosphatase (pteN) mRNA, complete cds Length = 1602 Score = 44.1 bits (22), Expect = 2.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1623 aaaagaaaatagtgagaaaaatatag 1648 ||||||||||||||| |||||||||| Sbjct: 765 aaaagaaaatagtgaaaaaaatatag 790
>gb|AC091353.6| Rattus norvegicus 4 BAC CH230-1B20 (Children's Hospital Oakland Research Institute) complete sequence Length = 242904 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2434 ggctttggttttgggttttgtt 2455 |||||||||||||||||||||| Sbjct: 16283 ggctttggttttgggttttgtt 16262
>gb|AC095825.6| Rattus norvegicus 4 BAC CH230-9J6 (Children's Hospital Oakland Research Institute) complete sequence Length = 234084 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2434 ggctttggttttgggttttgtt 2455 |||||||||||||||||||||| Sbjct: 121975 ggctttggttttgggttttgtt 121996
>gb|AC110038.25| Mus musculus chromosome 1, clone RP23-258M15, complete sequence Length = 232830 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2665 aattgacagtcttatcttatct 2686 |||||||||||||||||||||| Sbjct: 199724 aattgacagtcttatcttatct 199703
>gb|AC099735.47| Mus musculus chromosome 1, clone RP23-218I9, complete sequence Length = 207768 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2665 aattgacagtcttatcttatct 2686 |||||||||||||||||||||| Sbjct: 69379 aattgacagtcttatcttatct 69358
>gb|AF483827.1| Dictyostelium discoideum PteN mRNA, complete cds Length = 1789 Score = 44.1 bits (22), Expect = 2.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1623 aaaagaaaatagtgagaaaaatatag 1648 ||||||||||||||| |||||||||| Sbjct: 891 aaaagaaaatagtgaaaaaaatatag 916
>gb|AF467431.1| Dictyostelium discoideum Pten 3-phosphoinositide phosphatase alpha (ptenA) mRNA, complete cds Length = 1986 Score = 44.1 bits (22), Expect = 2.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1623 aaaagaaaatagtgagaaaaatatag 1648 ||||||||||||||| |||||||||| Sbjct: 911 aaaagaaaatagtgaaaaaaatatag 936
>dbj|AP004661.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0048E12 Length = 152543 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1104 agctggggagatcgcggccctc 1125 |||||||||||||||||||||| Sbjct: 60570 agctggggagatcgcggccctc 60591 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 426,157,075 Number of extensions: 23352519 Number of successful extensions: 124487 Number of sequences better than 10.0: 19 Number of HSP's gapped: 124481 Number of HSP's successfully gapped: 53 Length of query: 2737 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2714 Effective length of database: 18,503,978,556 Effective search space: 50219797800984 Effective search space used: 50219797800984 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)